BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146632.1 + phase: 0
(432 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC86746 weakly similar to GP|15081811|gb|AAK82560.1 AT3g13340/MD... 871 0.0
TC86363 similar to GP|15081811|gb|AAK82560.1 AT3g13340/MDC11_13 ... 590 e-169
TC78914 similar to GP|13937195|gb|AAK50091.1 At1g78070/F28K19_28... 285 2e-77
BI272838 similar to GP|17979111|gb unknown protein {Arabidopsis ... 195 2e-75
TC82537 similar to GP|17979111|gb|AAL47499.1 unknown protein {Ar... 179 1e-45
TC83309 weakly similar to GP|12324715|gb|AAG52318.1 unknown prot... 135 4e-32
TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclea... 52 3e-07
TC82282 similar to PIR|T08544|T08544 hypothetical protein F27B13... 46 2e-05
TC78188 similar to PIR|C84870|C84870 probable splicing factor [i... 44 9e-05
TC87005 similar to GP|9294061|dbj|BAB02018.1 WD40-repeat protein... 44 2e-04
TC77248 similar to GP|13489182|gb|AAK27816.1 putative WD-repeat ... 42 5e-04
AL371525 similar to GP|16323188|gb| AT5g67320/K8K14_4 {Arabidops... 40 0.002
TC78328 similar to GP|11994333|dbj|BAB02292. WD-40 repeat protei... 40 0.002
BG586181 similar to GP|4689316|gb| peroxisomal targeting signal ... 39 0.003
TC79342 similar to GP|10177096|dbj|BAB10430. Notchless protein h... 39 0.003
TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {... 38 0.009
TC88235 similar to GP|12656803|gb|AAK00964.1 unknown protein {Or... 38 0.009
TC89922 weakly similar to GP|15912305|gb|AAL08286.1 AT4g18900/F1... 37 0.019
TC86168 homologue to GP|13936812|gb|AAK49947.1 TGF-beta receptor... 36 0.033
TC82588 similar to GP|22136910|gb|AAM91799.1 unknown protein {Ar... 36 0.033
>TC86746 weakly similar to GP|15081811|gb|AAK82560.1 AT3g13340/MDC11_13
{Arabidopsis thaliana}, partial (86%)
Length = 1732
Score = 871 bits (2250), Expect = 0.0
Identities = 428/432 (99%), Positives = 429/432 (99%)
Frame = +1
Query: 1 MEEDDFFDDVDEQEEFDGAAEDVPLDEYEMQLTKVTDTSAAHARKGKDIQGIPWEMLNIT 60
MEEDDFFDDVDEQEEFDGAAEDVPLDEYEM LTKVTDTSAAHARKGKDIQGIPWEMLNIT
Sbjct: 235 MEEDDFFDDVDEQEEFDGAAEDVPLDEYEM-LTKVTDTSAAHARKGKDIQGIPWEMLNIT 411
Query: 61 RESYRLTRLEQYRNFENILTSGETADKDCKQVQKGDKYYEFFYNTRTVKPTILHFQLRNL 120
RESYRLTRLEQYRNFENILTSGETADKDCKQVQKGDKYYEFFYNTRTVKPTILHFQLRNL
Sbjct: 412 RESYRLTRLEQYRNFENILTSGETADKDCKQVQKGDKYYEFFYNTRTVKPTILHFQLRNL 591
Query: 121 VWATSKHDVYLVSNYSIKHWSSLSGNLSEIINFLGHVAPTEVLQCAGNQMEGFSQTQIST 180
VWATSKHDVYLVSNYSIKHWSSLSGNLSEIINFLGHVAPTE +CAGNQMEGFSQTQIST
Sbjct: 592 VWATSKHDVYLVSNYSIKHWSSLSGNLSEIINFLGHVAPTE--RCAGNQMEGFSQTQIST 765
Query: 181 LAVKDNFLVAGGFQGELTCKRLDKKGVSFCTRTTHDDNAITNAVEIYESLSGATHFIAAN 240
LAVKDNFLVAGGFQGELTCKRLDKKGVSFCTRTTHDDNAITNAVEIYESLSGATHFIAAN
Sbjct: 766 LAVKDNFLVAGGFQGELTCKRLDKKGVSFCTRTTHDDNAITNAVEIYESLSGATHFIAAN 945
Query: 241 NDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVGDNLEGLLVDPQNGKTVATL 300
NDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVGDNLEGLLVDPQNGKTVATL
Sbjct: 946 NDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVGDNLEGLLVDPQNGKTVATL 1125
Query: 301 SGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFSSDGQ 360
SGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFSSDGQ
Sbjct: 1126SGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFSSDGQ 1305
Query: 361 FMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGVSVSPDDECMYIGIWDRTYASLLQYN 420
FMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGVSVSPDDECMYIGIWDRTYASLLQYN
Sbjct: 1306FMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGVSVSPDDECMYIGIWDRTYASLLQYN 1485
Query: 421 RRHSYHYLDSYF 432
RRHSYHYLDSYF
Sbjct: 1486RRHSYHYLDSYF 1521
>TC86363 similar to GP|15081811|gb|AAK82560.1 AT3g13340/MDC11_13
{Arabidopsis thaliana}, partial (92%)
Length = 1745
Score = 590 bits (1522), Expect = e-169
Identities = 277/432 (64%), Positives = 343/432 (79%), Gaps = 3/432 (0%)
Frame = +2
Query: 2 EEDDFFDDVD---EQEEFDGAAEDVPLDEYEMQLTKVTDTSAAHARKGKDIQGIPWEMLN 58
E +D D++D E +G + +DEY+ +K DT+AA AR+G+DIQGIPW+ L+
Sbjct: 92 EMEDVEDEIDIDGESINREGGDAESDVDEYDYSSSKAVDTTAAQARRGQDIQGIPWDSLS 271
Query: 59 ITRESYRLTRLEQYRNFENILTSGETADKDCKQVQKGDKYYEFFYNTRTVKPTILHFQLR 118
ITRE YR TRL+QY+N+ENIL SG+ + KDCK KG +YEF N+R+ K TILHFQLR
Sbjct: 272 ITRERYRQTRLDQYKNYENILHSGDRSGKDCKSTDKGYSFYEFRRNSRSAKSTILHFQLR 451
Query: 119 NLVWATSKHDVYLVSNYSIKHWSSLSGNLSEIINFLGHVAPTEVLQCAGNQMEGFSQTQI 178
NLVWATSKHDVYL+S +S+ HWSSL+ SE++N GHVAP+E + G+ +EGF+ TQ+
Sbjct: 452 NLVWATSKHDVYLMSQFSVTHWSSLTCTSSEVLNVSGHVAPSE--KHPGSLLEGFTHTQV 625
Query: 179 STLAVKDNFLVAGGFQGELTCKRLDKKGVSFCTRTTHDDNAITNAVEIYESLSGATHFIA 238
STLAVKDN LVAGGFQGEL CK LD+ GVSFC+RTT+DDNAITNA+EIY+S SGA HF A
Sbjct: 626 STLAVKDNLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAIEIYDSPSGAVHFTA 805
Query: 239 ANNDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVGDNLEGLLVDPQNGKTVA 298
+NND G+R +D+EKFQL FPWPVNHTS+SPD KL+ +VGDN E +LVD QNGKT+A
Sbjct: 806 SNNDCGIRNFDMEKFQLSKHFRFPWPVNHTSLSPDGKLLLIVGDNPESMLVDSQNGKTIA 985
Query: 299 TLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFSSD 358
LSGH D+SFAS+W+P+G+ FATGNQDKTCR+WD RN+S +A+LK NLGA RSIR SSD
Sbjct: 986 PLSGHLDFSFASSWNPDGVTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAIRSIRHSSD 1165
Query: 359 GQFMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGVSVSPDDECMYIGIWDRTYASLLQ 418
G++M +AEPADFVHVY + YEK QEIDFFGEISG+S SPD E ++IG+WDRTY SLL+
Sbjct: 1166GKYMAIAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLE 1345
Query: 419 YNRRHSYHYLDS 430
Y RRH+Y YLDS
Sbjct: 1346YGRRHNYSYLDS 1381
>TC78914 similar to GP|13937195|gb|AAK50091.1 At1g78070/F28K19_28
{Arabidopsis thaliana}, partial (76%)
Length = 1732
Score = 285 bits (729), Expect = 2e-77
Identities = 133/257 (51%), Positives = 182/257 (70%), Gaps = 1/257 (0%)
Frame = +1
Query: 175 QTQISTLAVKDNFLVAGGFQ-GELTCKRLDKKGVSFCTRTTHDDNAITNAVEIYESLSGA 233
+ +++ LAVK+N +V F G + GV+FC++ T DD+AITNAV+++ + G+
Sbjct: 658 ECKLAPLAVKENLMVGRWFPWGSFFARI*IHSGVAFCSKITTDDSAITNAVDVFRNPRGS 837
Query: 234 THFIAANNDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVGDNLEGLLVDPQN 293
IAANNDS VR +D E F L + W VN+ S+SPD KL+ V+GD+ EGL+ D
Sbjct: 838 LKVIAANNDSQVRVFDAENFASLGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANT 1017
Query: 294 GKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSI 353
GK L GH DYSF+SAWHPNG ATGNQD TCR+WD RN+S IA+LK +GA RS+
Sbjct: 1018GKVTGNLKGHLDYSFSSAWHPNGQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSL 1197
Query: 354 RFSSDGQFMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGVSVSPDDECMYIGIWDRTY 413
+F+SDG+F+ +AEPADFVH++ + + Y +SQEID FGEI+G+S SPD E +++G+ DRTY
Sbjct: 1198KFTSDGKFLAMAEPADFVHIFDSHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTY 1377
Query: 414 ASLLQYNRRHSYHYLDS 430
SLL++ R+H Y YLDS
Sbjct: 1378GSLLEFTRKHYYQYLDS 1428
Score = 167 bits (423), Expect = 7e-42
Identities = 91/181 (50%), Positives = 118/181 (64%), Gaps = 3/181 (1%)
Frame = +3
Query: 26 DEYEMQLTKVTDTSAAHARKGKDIQGIPWEMLNITRESYRLTRLEQYRNFENILTSGETA 85
D+++ K TDTSA AR GKDIQGIPWE LN +R+ YR TRL+QY+N+E + S E
Sbjct: 222 DDFQTSNVK-TDTSAFEARNGKDIQGIPWEKLNYSRDEYRETRLKQYKNYECLTRSREDL 398
Query: 86 DKDCKQVQKGDKYYEFFYNTRTVKPTILHFQLRNLVWATSKHDVYLVSNYSIKHWSSLSG 145
DK+C +V+KG+ +Y+F +NTR VK TI HFQLRNL+WATSKHDVYL+ NYS+ HWSSL
Sbjct: 399 DKECLEVEKGNSFYDFQFNTRLVKSTIAHFQLRNLLWATSKHDVYLMQNYSVMHWSSLLQ 578
Query: 146 NLSEIINFLGHVAPTEVLQCAGNQMEGFSQTQISTLAVKDNFLVAGG---FQGELTCKRL 202
E++N V PT + C S+ QIST+ + GG G+L CK L
Sbjct: 579 RGKEVLNVAKPVIPT-LKHC--GLAHPVSRVQISTIGC*GK--LDGGQVVSMGKLLCKNL 743
Query: 203 D 203
+
Sbjct: 744 N 746
>BI272838 similar to GP|17979111|gb unknown protein {Arabidopsis thaliana},
partial (43%)
Length = 690
Score = 195 bits (496), Expect(2) = 2e-75
Identities = 87/130 (66%), Positives = 106/130 (80%)
Frame = +1
Query: 231 SGATHFIAANNDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVGDNLEGLLVD 290
SGA HF A+NND G+R +D+EKFQL FPWPVNHTS+SPD KL+ +VGDN E +LVD
Sbjct: 301 SGAVHFTASNNDCGIRNFDMEKFQLSKHFRFPWPVNHTSLSPDGKLLLIVGDNPESMLVD 480
Query: 291 PQNGKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGAS 350
QNGKT+A LSGH D+SFAS+W+P+G+ FATGNQDKTCR+WD RN+S +A+LK NLGA
Sbjct: 481 SQNGKTIAPLSGHLDFSFASSWNPDGVTFATGNQDKTCRIWDMRNLSKSVAVLKGNLGAI 660
Query: 351 RSIRFSSDGQ 360
RSI SSDG+
Sbjct: 661 RSIXHSSDGK 690
Score = 105 bits (263), Expect(2) = 2e-75
Identities = 48/63 (76%), Positives = 57/63 (90%)
Frame = +2
Query: 167 GNQMEGFSQTQISTLAVKDNFLVAGGFQGELTCKRLDKKGVSFCTRTTHDDNAITNAVEI 226
G+ +EGF+ TQ+STLAVKDN LVAGGFQGEL CK LD+ GVSFC+RTT+DDNAITNA+EI
Sbjct: 14 GSLLEGFTHTQVSTLAVKDNLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAIEI 193
Query: 227 YES 229
Y+S
Sbjct: 194 YDS 202
>TC82537 similar to GP|17979111|gb|AAL47499.1 unknown protein {Arabidopsis
thaliana}, partial (24%)
Length = 664
Score = 179 bits (455), Expect = 1e-45
Identities = 87/150 (58%), Positives = 112/150 (74%), Gaps = 7/150 (4%)
Frame = +2
Query: 1 MEEDDFFDDVDEQEEFDGA-------AEDVPLDEYEMQLTKVTDTSAAHARKGKDIQGIP 53
+++D+ +VD+ F G ++ DEY+ ++TDT+AA AR+GKDIQGIP
Sbjct: 215 VQDDNEMAEVDDDMYFRGGRALGESDTDEDDDDEYDPLENRITDTTAAEARRGKDIQGIP 394
Query: 54 WEMLNITRESYRLTRLEQYRNFENILTSGETADKDCKQVQKGDKYYEFFYNTRTVKPTIL 113
W+ L+ITRE YR TRLEQY+N+ENI SGE ++K+CK QKG YY+F+ NTR+VK TIL
Sbjct: 395 WDRLSITREKYRETRLEQYKNYENIQRSGELSEKECKATQKGGLYYDFWQNTRSVKSTIL 574
Query: 114 HFQLRNLVWATSKHDVYLVSNYSIKHWSSL 143
HFQLRNLVW+TSKHDVYLV +YSI HWSSL
Sbjct: 575 HFQLRNLVWSTSKHDVYLVVHYSIVHWSSL 664
>TC83309 weakly similar to GP|12324715|gb|AAG52318.1 unknown protein;
4584-7806 {Arabidopsis thaliana}, partial (28%)
Length = 614
Score = 135 bits (339), Expect = 4e-32
Identities = 64/138 (46%), Positives = 91/138 (65%)
Frame = +3
Query: 295 KTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIR 354
KT+ TL GH DYSFA W P+G ATGNQDKT R++ RN+S +L +GA RS+
Sbjct: 3 KTITTLKGHFDYSFACCWSPDGKIIATGNQDKTTRLYHIRNMSKAFDVLGAKIGAVRSLH 182
Query: 355 FSSDGQFMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGVSVSPDDECMYIGIWDRTYA 414
FS DG+++ +AEPADFVH++ +E+SQ ID FGEI+GV+ +PD + +YI D Y
Sbjct: 183 FSEDGRYLAMAEPADFVHIFD-AHTFERSQVIDLFGEIAGVTFTPDTDGLYIANADENYG 359
Query: 415 SLLQYNRRHSYHYLDSYF 432
+L+Y + S + + + F
Sbjct: 360 CILEYEKISSINDVGNIF 413
>TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclear
ribonucleoprotein [imported] - Arabidopsis thaliana,
partial (60%)
Length = 1836
Score = 52.4 bits (124), Expect = 3e-07
Identities = 44/163 (26%), Positives = 68/163 (40%), Gaps = 10/163 (6%)
Frame = +1
Query: 239 ANNDSGVREYDIE-KFQLLNQLHFPWPVNHTSISPDRKLMTVVGDNLEGLLVDPQNGKTV 297
A+ D R +D+E + +LL Q V D L G + + D + G++V
Sbjct: 1255 ASYDKTWRLWDVETEEELLLQEGHSRSVYGLDFHHDGSLAASCGLDALARVWDLRTGRSV 1434
Query: 298 ATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFSS 357
L GH ++ PNG ATG +D TCR+WD R S I ++ S+
Sbjct: 1435 LALEGHVKSILGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPQ 1614
Query: 358 DGQFMVVA---------EPADFVHVYSTTANYEKSQEIDFFGE 391
+G F+V A DF V + + + K +D G+
Sbjct: 1615 EGYFLVTASYDMTAKVWSSRDFKPVKTLSGHEAKVTSLDVLGD 1743
Score = 36.2 bits (82), Expect = 0.025
Identities = 27/119 (22%), Positives = 43/119 (35%)
Frame = +1
Query: 294 GKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSI 353
G + T GH + A+HP+G T + DKT R+WD + + + + + +
Sbjct: 1171 GALLGTFKGHLERLARIAFHPSGKYLGTASYDKTWRLWDV-ETEEELLLQEGHSRSVYGL 1347
Query: 354 RFSSDGQFMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGVSVSPDDECMYIGIWDRT 412
F DG V+ I G+S SP+ + G D T
Sbjct: 1348 DFHHDGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDNT 1524
>TC82282 similar to PIR|T08544|T08544 hypothetical protein F27B13.70 -
Arabidopsis thaliana, partial (84%)
Length = 904
Score = 46.2 bits (108), Expect = 2e-05
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 242 DSGVREYDIEKFQLLNQL--HFPWPVNHTSISP-DRKLMTVVGDNLEGLLVDPQNGKTVA 298
D + +D+++ + L+ L HF PV SP D +L+ D+ + D +
Sbjct: 611 DGTISVFDVQRAKFLHHLEGHF-MPVRSLVYSPYDPRLLFSASDDGNVHMYDAEGKALXG 787
Query: 299 TLSGHQDYSFASAWHPNGLAFATGNQDKTCRVW 331
T+S H + PNG A ATG+ DKT R+W
Sbjct: 788 TMSXHASWVLCVDVSPNGAAIATGSSDKTVRLW 886
Score = 38.1 bits (87), Expect = 0.007
Identities = 47/197 (23%), Positives = 77/197 (38%), Gaps = 21/197 (10%)
Frame = +2
Query: 237 IAANN--DSGVREYDIEKFQLLNQLHFP----WPVNHTSISPDRKLMTVVGDNLEGL-LV 289
IAA++ DS VR +D++ + L P W + P ++ V G + L
Sbjct: 296 IAASSSLDSFVRVFDVDSNATIATLEAPPSEVWQMR---FDPKGAILAVAGGGSASVNLW 466
Query: 290 DPQNGKTVATLS-------------GHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNV 336
D + V TLS G + + + AW P+G A G+ D T V+D +
Sbjct: 467 DTSTWELVVTLSIPRVEGPKPSDKSGSKKFVLSVAWSPDGKRLACGSMDGTISVFDVQRA 646
Query: 337 SSPIAILKNNLGASRSIRFSS-DGQFMVVAEPADFVHVYSTTANYEKSQEIDFFGEISGV 395
+ L+ + RS+ +S D + + A VH+Y + V
Sbjct: 647 KF-LHHLEGHFMPVRSLVYSPYDPRLLFSASDDGNVHMYDAEGKALXGTMSXHASWVLCV 823
Query: 396 SVSPDDECMYIGIWDRT 412
VSP+ + G D+T
Sbjct: 824 DVSPNGAAIATGSSDKT 874
>TC78188 similar to PIR|C84870|C84870 probable splicing factor [imported] -
Arabidopsis thaliana, partial (95%)
Length = 1436
Score = 44.3 bits (103), Expect = 9e-05
Identities = 20/97 (20%), Positives = 45/97 (45%)
Frame = +1
Query: 297 VATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFS 356
+ L+GHQ + ++P G A+G+ DK +W+ +LK + A + ++
Sbjct: 292 IMLLTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHWT 471
Query: 357 SDGQFMVVAEPADFVHVYSTTANYEKSQEIDFFGEIS 393
SDG ++ A P + ++ T + + ++ ++
Sbjct: 472 SDGTQIISASPDKTLRLWDTETGKQIKKMVEHLSYVN 582
Score = 35.4 bits (80), Expect = 0.043
Identities = 28/149 (18%), Positives = 57/149 (37%), Gaps = 7/149 (4%)
Frame = +1
Query: 237 IAANNDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVGDNLEGLLVDPQNGKT 296
++ ++D + +D+ + + + + S S + G + + + D + G+
Sbjct: 619 VSGSDDGTAKLWDMRQRGSIQTFPDKYQITAVSFSDASDKIYTGGIDNDVKIWDLRKGEV 798
Query: 297 VATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIR-- 354
TL GHQD + P+G T D +WD R + +K G +
Sbjct: 799 TMTLQGHQDMITSMQLSPDGSYLLTNGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKN 978
Query: 355 -----FSSDGQFMVVAEPADFVHVYSTTA 378
+S DG + V+++ TT+
Sbjct: 979 LLKCGWSPDGSKVTAGSSDRMVYIWDTTS 1065
Score = 29.3 bits (64), Expect = 3.1
Identities = 12/38 (31%), Positives = 18/38 (46%)
Frame = +1
Query: 295 KTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWD 332
K L GH++ W +G + + DKT R+WD
Sbjct: 415 KNFMVLKGHKNAVLDLHWTSDGTQIISASPDKTLRLWD 528
>TC87005 similar to GP|9294061|dbj|BAB02018.1 WD40-repeat protein
{Arabidopsis thaliana}, partial (74%)
Length = 1480
Score = 43.5 bits (101), Expect = 2e-04
Identities = 22/71 (30%), Positives = 35/71 (48%), Gaps = 3/71 (4%)
Frame = +3
Query: 265 VNHTSISPDRKLMTVVGDNLEGLLVDPQNGKTVATLS---GHQDYSFASAWHPNGLAFAT 321
VN SPD + +G++ D + G+ + LS GH +A +W P+G T
Sbjct: 609 VNCVRYSPDGSKFVTGSSDKKGIIFDGKTGEKIGELSSEGGHTGSIYAVSWSPDGKQVLT 788
Query: 322 GNQDKTCRVWD 332
+ DK+ +VWD
Sbjct: 789 VSADKSAKVWD 821
Score = 28.5 bits (62), Expect = 5.3
Identities = 18/67 (26%), Positives = 30/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 270 ISPDRKLMTVVGDNLEG-LLVDPQNGKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTC 328
IS D K T+ N ++++ N V+ H + + + PNG A+ + T
Sbjct: 102 ISGDSKSNTITYTNARSVIMMNLHNPLQVSVYGEHAYPATVARFSPNGEWVASADVSGTV 281
Query: 329 RVWDARN 335
R+W RN
Sbjct: 282 RIWGTRN 302
>TC77248 similar to GP|13489182|gb|AAK27816.1 putative WD-repeat containing
protein {Oryza sativa}, partial (92%)
Length = 2005
Score = 42.0 bits (97), Expect = 5e-04
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +1
Query: 293 NGKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRS 352
+G + +S + ++A+HP+GL TG D ++WD ++ ++ +A ++G +
Sbjct: 1114 SGTCLTQVSDSSEGYTSAAFHPDGLILGTGTTDSLVKIWDVKSQAN-VAKFDGHVGHVTA 1290
Query: 353 IRFSSDGQFMVVA 365
I FS +G ++ A
Sbjct: 1291 ISFSENGYYLATA 1329
Score = 34.7 bits (78), Expect = 0.073
Identities = 21/76 (27%), Positives = 36/76 (46%), Gaps = 8/76 (10%)
Frame = +1
Query: 264 PVNHTS--------ISPDRKLMTVVGDNLEGLLVDPQNGKTVATLSGHQDYSFASAWHPN 315
P+N TS I + L+ + ++ D +G+ +ATL+GH + +
Sbjct: 742 PLNKTSKQGIIALDILHSKDLIATGNIDTNAVIFDRPSGQVLATLTGHSKKVTSVKFVGQ 921
Query: 316 GLAFATGNQDKTCRVW 331
G + TG+ DKT R+W
Sbjct: 922 GESIITGSADKTVRLW 969
>AL371525 similar to GP|16323188|gb| AT5g67320/K8K14_4 {Arabidopsis
thaliana}, partial (14%)
Length = 479
Score = 39.7 bits (91), Expect = 0.002
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 290 DPQNGKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLG 348
D + GK + +L+GH+D + ++ PNG A+G+ DK+ +W + N I K N G
Sbjct: 3 DAELGKLIHSLNGHRDRVYTISFSPNGEYLASGSPDKSINIW-SLNDGKIIKTYKGNGG 176
>TC78328 similar to GP|11994333|dbj|BAB02292. WD-40 repeat protein-like
{Arabidopsis thaliana}, partial (88%)
Length = 1516
Score = 39.7 bits (91), Expect = 0.002
Identities = 25/97 (25%), Positives = 43/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 236 FIAANNDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVG-DNLEGLLVDPQNG 294
+I + S V+ +D + L+ P V S+ P V G ++L + D G
Sbjct: 862 YITTADGSTVKFWDANHYGLVKSYDMPCNVESASLEPKFGNKFVAGGEDLWVHVFDFHTG 1041
Query: 295 KTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVW 331
+A GH + P G ++A+G++D T R+W
Sbjct: 1042DEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIW 1152
Score = 37.4 bits (85), Expect = 0.011
Identities = 23/121 (19%), Positives = 50/121 (41%)
Frame = +1
Query: 267 HTSISPDRKLMTVVGDNLEGLLVDPQNGKTVATLSGHQDYSFASAWHPNGLAFATGNQDK 326
++ ++PD + + +L + + G + T GH+ ++ N L AT + D
Sbjct: 331 YSPVTPDGFFLISASKDASPMLRNGETGDWIGTFEGHKGAVWSCCLDANALRAATASADF 510
Query: 327 TCRVWDARNVSSPIAILKNNLGASRSIRFSSDGQFMVVAEPADFVHVYSTTANYEKSQEI 386
+ +VWDA + + ++ R+ FS D ++ + +Y +E+
Sbjct: 511 STKVWDALTGDALHSFEHKHI--VRACAFSEDTHLLLTGGAEKILRIYDLNRPDAPPKEV 684
Query: 387 D 387
D
Sbjct: 685 D 687
>BG586181 similar to GP|4689316|gb| peroxisomal targeting signal type 2
receptor {Arabidopsis thaliana}, partial (56%)
Length = 804
Score = 39.3 bits (90), Expect = 0.003
Identities = 20/67 (29%), Positives = 37/67 (54%), Gaps = 1/67 (1%)
Frame = +1
Query: 300 LSGHQDYSFASAWHP-NGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFSSD 358
L H+ + W+ + ATG+ DK+ +VWD R+ P+A+L + A R ++FS
Sbjct: 154 LPAHEHEILSCDWNKYDECIIATGSVDKSVKVWDVRSYRVPVAVLNGHGYAVRKVKFSPH 333
Query: 359 GQFMVVA 365
+ ++V+
Sbjct: 334 VRNLLVS 354
>TC79342 similar to GP|10177096|dbj|BAB10430. Notchless protein homolog
{Arabidopsis thaliana}, partial (47%)
Length = 873
Score = 39.3 bits (90), Expect = 0.003
Identities = 21/66 (31%), Positives = 35/66 (52%)
Frame = +3
Query: 298 ATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFSS 357
AT+SGH + + A+ P+G A+G+ D T R WD +P+ + I +S
Sbjct: 477 ATISGHGEAVLSVAFSPDGRQLASGSGDTTVRFWDL-GTQTPMYTCTGHKNWVLCIAWSP 653
Query: 358 DGQFMV 363
DG+++V
Sbjct: 654 DGKYLV 671
Score = 27.7 bits (60), Expect = 9.0
Identities = 10/34 (29%), Positives = 17/34 (49%)
Frame = +3
Query: 299 TLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWD 332
T +GH+++ AW P+G +G+ WD
Sbjct: 606 TCTGHKNWVLCIAWSPDGKYLVSGSMSGELICWD 707
>TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {Arabidopsis
thaliana}, partial (44%)
Length = 1098
Score = 37.7 bits (86), Expect = 0.009
Identities = 20/72 (27%), Positives = 39/72 (53%), Gaps = 1/72 (1%)
Frame = +2
Query: 264 PVNHTSISPDRKLMTVVGD-NLEGLLVDPQNGKTVATLSGHQDYSFASAWHPNGLAFATG 322
P + +P++KL+ + L D + GK + +L+GH+ ++ A+ PNG A+G
Sbjct: 473 PTGPGTNNPNKKLLLASASFDSTVKLWDIELGKLIHSLNGHRHPVYSVAFSPNGEYIASG 652
Query: 323 NQDKTCRVWDAR 334
+ DK+ +W +
Sbjct: 653 SLDKSLHIWSLK 688
Score = 29.3 bits (64), Expect = 3.1
Identities = 11/36 (30%), Positives = 17/36 (46%)
Frame = +2
Query: 299 TLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDAR 334
T +GHQ W P G A+ + D T ++W +
Sbjct: 302 TFAGHQGEVNCVKWDPTGTLLASCSDDITAKIWSVK 409
>TC88235 similar to GP|12656803|gb|AAK00964.1 unknown protein {Oryza
sativa}, partial (91%)
Length = 1080
Score = 37.7 bits (86), Expect = 0.009
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 239 ANNDSGVREYDIEKFQLLNQLHFP-WPVNHTSISPDRKLMTVVGD-NLEGLLVDPQNGKT 296
A+ D +R ++ + + + +P VN I+PD++ + G+ ++ V+ + +
Sbjct: 242 ASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRLFDVNSNSPQP 421
Query: 297 VATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDAR 334
V + GH A + +G +G++D T ++WD R
Sbjct: 422 VMSYDGHTSNVMAVGFQCDGNWMYSGSEDGTVKIWDLR 535
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = +2
Query: 313 HPNGLAFATGNQDKTCRVWDARNVSSPIAILKNNLGASRSIRFSSDGQFMVVAEPADFVH 372
HPN +G+Q+ RVWD S ++ A RS+ DG +V A +
Sbjct: 593 HPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAANNNGTCY 772
Query: 373 VY------STTANYE 381
V+ T N+E
Sbjct: 773 VWRLLRGTQTMTNFE 817
>TC89922 weakly similar to GP|15912305|gb|AAL08286.1 AT4g18900/F13C5_70
{Arabidopsis thaliana}, partial (48%)
Length = 864
Score = 36.6 bits (83), Expect = 0.019
Identities = 19/45 (42%), Positives = 27/45 (59%), Gaps = 1/45 (2%)
Frame = +1
Query: 320 ATGNQDKTCRVWD-ARNVSSPIAILKNNLGASRSIRFSSDGQFMV 363
ATG+ DKT ++WD + N S +A + GA SI FS D F++
Sbjct: 553 ATGSMDKTVKLWDLSNNQPSSVASKEPKAGAVFSISFSEDNPFLL 687
>TC86168 homologue to GP|13936812|gb|AAK49947.1 TGF-beta
receptor-interacting protein 1 {Phaseolus vulgaris},
complete
Length = 1322
Score = 35.8 bits (81), Expect = 0.033
Identities = 21/74 (28%), Positives = 37/74 (49%)
Frame = +2
Query: 264 PVNHTSISPDRKLMTVVGDNLEGLLVDPQNGKTVATLSGHQDYSFASAWHPNGLAFATGN 323
P+N T IS + + D+ G L+ + + GH+ + A +G F TG+
Sbjct: 635 PLNKTIISAGEDAVIRIWDSETGKLLKESDKEL-----GHKKTITSLAKSADGSHFCTGS 799
Query: 324 QDKTCRVWDARNVS 337
DK+ ++WD+R +S
Sbjct: 800 LDKSAKIWDSRTLS 841
Score = 30.8 bits (68), Expect = 1.1
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 11/108 (10%)
Frame = +2
Query: 237 IAANNDSGVREYDIEKFQLLNQLHFPWPVNHTSISPDRKLMTVVGD---------NLEGL 287
I + D + ++++ Q L +F P S KL + D +++ +
Sbjct: 371 ITGSADQTAKLWNVQTGQQLFTFNFDSPARSVDFSVGDKLAVITTDPFMELSSAIHVKRI 550
Query: 288 LVDP--QNGKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRVWDA 333
DP Q +++ + G Q + W P + +D R+WD+
Sbjct: 551 AKDPSDQTAESLLVIKGPQGRINRAIWGPLNKTIISAGEDAVIRIWDS 694
Score = 29.3 bits (64), Expect = 3.1
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Frame = +2
Query: 234 THFIAANNDSGVREYDIEKFQLLNQLHFPWPVNHTSISP-----------DRKLMTVV-- 280
+HF + D + +D L+ PVN ++SP D +T
Sbjct: 779 SHFCTGSLDKSAKIWDSRTLSLVKTYVTERPVNAVTMSPLLDHVVLGGGQDASAVTTTDH 958
Query: 281 -GDNLEGLLVDPQNGKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTCRV 330
E D + + + GH A A++P+G +F++G +D R+
Sbjct: 959 RAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 1111
>TC82588 similar to GP|22136910|gb|AAM91799.1 unknown protein {Arabidopsis
thaliana}, partial (15%)
Length = 706
Score = 35.8 bits (81), Expect = 0.033
Identities = 19/66 (28%), Positives = 33/66 (49%), Gaps = 1/66 (1%)
Frame = +2
Query: 269 SISPDRKLMTVVGDNLEGLLVDPQNGKTVATLSGHQDYSFASAWHP-NGLAFATGNQDKT 327
S SPD K++ + ++D + G + L GH+ + +HP A+G+ D+
Sbjct: 458 SFSPDGKILASTHGDHTVKIIDCETGNCLKVLVGHRRTPWVVRFHPLQRQILASGSLDQE 637
Query: 328 CRVWDA 333
R+WDA
Sbjct: 638 VRLWDA 655
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,100,031
Number of Sequences: 36976
Number of extensions: 178582
Number of successful extensions: 1067
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of query: 432
length of database: 9,014,727
effective HSP length: 99
effective length of query: 333
effective length of database: 5,354,103
effective search space: 1782916299
effective search space used: 1782916299
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146632.1