Medicago
BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146630.11 + phase: 0 
         (265 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC85783 homologue to GP|15131688|emb|CAC48323. 2-Cys peroxiredox...   526  e-150
TC85784 similar to GP|15131688|emb|CAC48323. 2-Cys peroxiredoxin...   419  e-118
AL387034 weakly similar to GP|10281259|gb thioredoxin peroxidase...   121  3e-28
TC88591 similar to GP|19423862|gb|AAL88710.1 cys peroxiredoxin {...    91  4e-19
BG585201 weakly similar to GP|14161441|gb thiol-specific antioxi...    80  6e-16
TC79043 homologue to GP|6899842|dbj|BAA90524.1 peroxiredoxin Q {...    74  4e-14
BQ752089 similar to GP|14161441|gb| thiol-specific antioxidant {...    46  1e-05
TC92016 weakly similar to PIR|E70344|E70344 conserved hypothetic...    39  0.002
AL382022 weakly similar to GP|22294918|dbj bacterioferritin comi...    33  0.087
TC93592 weakly similar to GP|13646986|dbj|BAB41080. DNA-binding ...    32  0.25
TC86330 similar to SP|Q43644|NUAM_SOLTU NADH-ubiquinone oxidored...    30  0.96
TC79414 homologue to GP|12597871|gb|AAG60180.1 unknown protein {...    30  0.96
TC82728 similar to GP|7292941|gb|AAF48332.1| CG11071-PA {Drosoph...    30  0.96
BG584281 weakly similar to GP|14209590|dbj hypothetical protein~...    30  1.3
TC77257 weakly similar to GP|14134199|gb|AAK54282.1 fatty acid 9...    29  2.1
TC88040 homologue to SP|Q41266|AOX2_SOYBN Alternative oxidase 2 ...    28  2.8
TC82157 similar to PIR|B32372|B32372 male-specific doublesex pro...    28  2.8
TC92853 similar to GP|20268748|gb|AAM14077.1 unknown protein {Ar...    28  3.6
TC93245 similar to PIR|T05995|T05995 hypothetical protein F17M5....    28  3.6
TC76615 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland co...    28  4.8

>TC85783 homologue to GP|15131688|emb|CAC48323. 2-Cys peroxiredoxin {Pisum
           sativum}, partial (91%)
          Length = 1136

 Score =  526 bits (1355), Expect = e-150
 Identities = 265/265 (100%), Positives = 265/265 (100%)
 Frame = +3

Query: 1   MACCSAPSASLLSSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSR 60
           MACCSAPSASLLSSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSR
Sbjct: 48  MACCSAPSASLLSSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSR 227

Query: 61  RSFVVRASSELPLVGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPT 120
           RSFVVRASSELPLVGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPT
Sbjct: 228 RSFVVRASSELPLVGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPT 407

Query: 121 EITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISK 180
           EITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISK
Sbjct: 408 EITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISK 587

Query: 181 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVC 240
           SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVC
Sbjct: 588 SYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVC 767

Query: 241 PAGWKPGEKSMKPDPKLSKEYFSAV 265
           PAGWKPGEKSMKPDPKLSKEYFSAV
Sbjct: 768 PAGWKPGEKSMKPDPKLSKEYFSAV 842


>TC85784 similar to GP|15131688|emb|CAC48323. 2-Cys peroxiredoxin {Pisum
           sativum}, partial (86%)
          Length = 1114

 Score =  419 bits (1076), Expect = e-118
 Identities = 225/273 (82%), Positives = 239/273 (87%), Gaps = 8/273 (2%)
 Frame = +2

Query: 1   MACCSAPSA--SLLSS-NP-NILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNR- 55
           MAC +  ++  SL SS NP + LFSPKL   P  S+LSIPN   SLPK  +   LS  R 
Sbjct: 134 MACSATTTSASSLFSSLNPKSSLFSPKL---PSSSTLSIPN---SLPKPFSLPSLSFTRP 295

Query: 56  ---FTSSRRSFVVRASSELPLVGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPL 112
               +S R SF+V+ASSELPLVGNAAPDFEAEAVFDQEFI VKLS+YIGKKYVILFFYPL
Sbjct: 296 SLHHSSRRSSFLVKASSELPLVGNAAPDFEAEAVFDQEFINVKLSDYIGKKYVILFFYPL 475

Query: 113 DFTFVCPTEITAFSDRHAEFAELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVS 172
           DFTFVCPTEITAFSDRHAEF  +NTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVS
Sbjct: 476 DFTFVCPTEITAFSDRHAEFEAINTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVS 655

Query: 173 DVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYV 232
           DVTKSISKSYGVLIPDQGIALRGLFIIDKEG+IQHSTINNLGIGRSVDETKRTLQALQYV
Sbjct: 656 DVTKSISKSYGVLIPDQGIALRGLFIIDKEGIIQHSTINNLGIGRSVDETKRTLQALQYV 835

Query: 233 QENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAV 265
           QENPDEVCPAGWKPGEKSMKPDPKLSK+YF+AV
Sbjct: 836 QENPDEVCPAGWKPGEKSMKPDPKLSKDYFAAV 934


>AL387034 weakly similar to GP|10281259|gb thioredoxin peroxidase 3
           {Schistosoma mansoni}, partial (54%)
          Length = 376

 Score =  121 bits (303), Expect = 3e-28
 Identities = 55/118 (46%), Positives = 81/118 (68%)
 Frame = +2

Query: 78  APDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFAELNT 137
           AP +EA+AV D +   + L ++   KY+++ FYPLDFTFVCPTE+ AFSDR  EF ++NT
Sbjct: 23  APHWEAKAVVDGDVKTLSLKDF-ASKYLVMVFYPLDFTFVCPTELIAFSDRVQEFRDINT 199

Query: 138 EILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQGIALRG 195
           E++G+S DS  +H+AW +  R  GGLG +  PL++D+ K I++ YG +  + G   RG
Sbjct: 200 EVVGISCDSHHAHIAWDKIPRNQGGLGGIKIPLIADLKKEITRRYGCMFEETGHPFRG 373


>TC88591 similar to GP|19423862|gb|AAL88710.1 cys peroxiredoxin {Xerophyta
           viscosa}, partial (92%)
          Length = 815

 Score = 91.3 bits (225), Expect = 4e-19
 Identities = 55/180 (30%), Positives = 89/180 (48%), Gaps = 5/180 (2%)
 Frame = +2

Query: 74  VGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFA 133
           +G+  PD E +        K+KL  +    + ILF +P DFT VC TE+   +   +EF 
Sbjct: 35  IGDTIPDLEVDTTQG----KIKLHHFCSDSWTILFSHPGDFTPVCTTELGKMAQYASEFN 202

Query: 134 ELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQ---- 189
           +    +LG+S D + SH  W++          +NYP++SD  + I K   ++ PD+    
Sbjct: 203 KRGVMLLGMSCDDLESHKEWIKDIEAHTPGAKVNYPIISDPKREIIKQLNMVDPDEKDSN 382

Query: 190 -GIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGE 248
             +  R L I+  +  I+ S +     GR++DE  R +++LQ   +      PA WKPGE
Sbjct: 383 GNLPSRALHIVGPDKKIKLSFLYPAQTGRNMDEVLRVVESLQKASKY-KIATPANWKPGE 559


>BG585201 weakly similar to GP|14161441|gb thiol-specific antioxidant
           {Ajellomyces capsulatus}, partial (92%)
          Length = 731

 Score = 80.5 bits (197), Expect = 6e-16
 Identities = 49/184 (26%), Positives = 94/184 (50%), Gaps = 9/184 (4%)
 Frame = +1

Query: 74  VGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFA 133
           +G+ AP+F+A+    +    +   E+I   + +LF +P DFT VC TE+   + RH +F 
Sbjct: 10  LGDEAPNFKAKTTKGE----IDFHEFIKNSWAVLFSHPADFTPVCTTELGEVARRHKDFT 177

Query: 134 ELNTEILGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVL-------I 186
               +++G+S + +  H  WV+   +   +  +++P+++D  +++S  Y +L       +
Sbjct: 178 TRGVKVIGLSANELKDHEKWVEDINEVNSV-TVDFPIIADSDRTVSTLYDMLDHLDATNV 354

Query: 187 PDQGI--ALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGW 244
             +GI   +R +FIID +  I+         GR+ DE  R + +LQ + +      PA W
Sbjct: 355 DTKGIPFTVRNVFIIDPKKKIRLMITYPASTGRNFDEVIRVIDSLQ-LGDKHRITTPANW 531

Query: 245 KPGE 248
             G+
Sbjct: 532 NKGD 543


>TC79043 homologue to GP|6899842|dbj|BAA90524.1 peroxiredoxin Q {Sedum
           lineare}, partial (81%)
          Length = 935

 Score = 74.3 bits (181), Expect = 4e-14
 Identities = 65/210 (30%), Positives = 100/210 (46%), Gaps = 1/210 (0%)
 Frame = +3

Query: 21  SPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSRRSFVVRASSELPLVGNAAPD 80
           S  L+S P  S       S+S     TS P S     S +R F+    S+    G+  P 
Sbjct: 120 STSLTSAPFNSQFFGLKLSHSSISKTTSSPPS-----SFKRGFIFAKVSK----GSKPPA 272

Query: 81  FEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFAELNTEIL 140
           F  +   DQ+   V LS+Y GK  V+++FYP D T  C  +  AF D + +F +   E++
Sbjct: 273 FTLK---DQDGKTVSLSKYKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVV 440

Query: 141 GVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQG-IALRGLFII 199
           G+S D   SH A+ +  +       L + L+SD    + K +GV     G +  R  +++
Sbjct: 441 GISGDDSSSHKAFAKKYK-------LPFTLLSDEGNKVRKEWGVPGDFFGSLPGRETYVL 599

Query: 200 DKEGVIQHSTINNLGIGRSVDETKRTLQAL 229
           DK GV+Q    N     + +DET + LQ+L
Sbjct: 600 DKNGVVQLVYNNQFQPEKHIDETLKLLQSL 689


>BQ752089 similar to GP|14161441|gb| thiol-specific antioxidant {Ajellomyces
           capsulatus}, partial (30%)
          Length = 204

 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 23/61 (37%), Positives = 36/61 (58%)
 Frame = +3

Query: 74  VGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFA 133
           +G  AP+F+AE         +   E+IG  +V+LF +P D+T VC TE+ AF+    EF+
Sbjct: 33  LGTVAPNFKAETTNGP----IDFHEFIGDSWVVLFSHPEDYTPVCTTELGAFAKLEPEFS 200

Query: 134 E 134
           +
Sbjct: 201 K 203


>TC92016 weakly similar to PIR|E70344|E70344 conserved hypothetical protein
           aq_495 - Aquifex aeolicus, partial (16%)
          Length = 629

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 20/56 (35%), Positives = 31/56 (54%), Gaps = 1/56 (1%)
 Frame = +1

Query: 88  DQEFIKVKLSEYIGK-KYVILFFYPLDFTFVCPTEITAFSDRHAEFAELNTEILGV 142
           +Q+   V L   +G  K  I+FFYP D T+ C  E+  F D ++ F+E    +LG+
Sbjct: 91  NQDNEDVNLDTMVGTGKPSIVFFYPKDETYGCTQEVCHFRDSYSVFSEAGATVLGI 258


>AL382022 weakly similar to GP|22294918|dbj bacterioferritin comigratory
           protein {Thermosynechococcus elongatus BP-1}, partial
           (16%)
          Length = 392

 Score = 33.5 bits (75), Expect = 0.087
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = +3

Query: 140 LGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQGIALRGLFII 199
           LG+S D V  H  +  T R       L +PL+SD      K Y V      +  R  F+I
Sbjct: 24  LGISSDPVDKHKRFSDTQR-------LQFPLLSDPNGEARKLYEVPKTLGFLPGRASFLI 182

Query: 200 DKEGVIQ 206
           DK+G+I+
Sbjct: 183 DKDGIIR 203


>TC93592 weakly similar to GP|13646986|dbj|BAB41080. DNA-binding protein DF1
           {Pisum sativum}, partial (11%)
          Length = 622

 Score = 32.0 bits (71), Expect = 0.25
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = -1

Query: 6   APSASLLSSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSS 59
           +P AS+L  + +  F    S PP L + ++   S+SLP L  +LP   N F+ S
Sbjct: 478 SPRASMLLLSLSFPFPSSQSFPPFLYASALAFPSSSLPNLLQNLPAFSNSFSFS 317


>TC86330 similar to SP|Q43644|NUAM_SOLTU NADH-ubiquinone oxidoreductase 75
           kDa subunit  mitochondrial precursor (EC 1.6.5.3) (EC
           1.6.99.3), partial (95%)
          Length = 2619

 Score = 30.0 bits (66), Expect = 0.96
 Identities = 30/106 (28%), Positives = 52/106 (48%)
 Frame = +3

Query: 13  SSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSRRSFVVRASSELP 72
           S+NPN   +P   +P  LSS+S+P   +   +  + +P++L RF          +S  +P
Sbjct: 177 SANPNPPLNP---NPNSLSSISLPVHPSLALESISPIPMTLLRF----------SSMVIP 317

Query: 73  LVGNAAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVC 118
           L       F+ +++F   F +V+L   I   +VI+  +PL    VC
Sbjct: 318 L------KFQKDSLF---FKRVRLLVLIFLDFVIIADFPLLEIVVC 428


>TC79414 homologue to GP|12597871|gb|AAG60180.1 unknown protein {Arabidopsis
           thaliana}, partial (36%)
          Length = 1700

 Score = 30.0 bits (66), Expect = 0.96
 Identities = 22/60 (36%), Positives = 33/60 (54%), Gaps = 6/60 (10%)
 Frame = +2

Query: 16  PNILFSPK--LSSPPHLSSLSIPNASNSLPKLRTSLPLS----LNRFTSSRRSFVVRASS 69
           P  +FS K  LS+PP  ++LS P A+++ PKL+     S     N   S   SFV+ ++S
Sbjct: 683 PLSIFSSK*LLSTPPSPTTLSTPPATSTTPKLKPRTWFS*TY*RNSCLSKPSSFVIPSTS 862


>TC82728 similar to GP|7292941|gb|AAF48332.1| CG11071-PA {Drosophila
           melanogaster}, partial (2%)
          Length = 734

 Score = 30.0 bits (66), Expect = 0.96
 Identities = 21/59 (35%), Positives = 29/59 (48%), Gaps = 10/59 (16%)
 Frame = -1

Query: 5   SAPSASLLSSNPNILFSPKLSSPPHL----------SSLSIPNASNSLPKLRTSLPLSL 53
           +A S+++ SS+PN      L SPP L          SSL IP+    L K   ++PL L
Sbjct: 500 TASSSTITSSSPNF*SKITLPSPPSLSSSSHQRENESSLRIPDPELPLSKSSIAIPLKL 324


>BG584281 weakly similar to GP|14209590|dbj hypothetical protein~similar to
          Arabidopsis thaliana chromosome 3  MMM17.14, partial
          (28%)
          Length = 761

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 19/48 (39%), Positives = 24/48 (49%), Gaps = 2/48 (4%)
 Frame = +2

Query: 10 SLLSSNPNILFSPKLSSPPHLSSLSIPNA--SNSLPKLRTSLPLSLNR 55
          SLL     I+ +   SSPPH SSL   N+   N + +  T  PLS  R
Sbjct: 23 SLLCYESFIIMNSSSSSPPHYSSLPSSNSIPPNFISRATTPKPLSATR 166


>TC77257 weakly similar to GP|14134199|gb|AAK54282.1 fatty acid
           9-hydroperoxide lyase {Cucumis melo}, partial (81%)
          Length = 1989

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 21/82 (25%), Positives = 40/82 (48%)
 Frame = +3

Query: 1   MACCSAPSASLLSSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSR 60
           +A  +A S++    N  + F     +  ++S +   N+  ++ KL ++LPL     TSS 
Sbjct: 477 IASSNASSSTSFHQNTTLSFHSFKLT*LNISPILKKNSLENIKKLASTLPLEA*PSTSSS 656

Query: 61  RSFVVRASSELPLVGNAAPDFE 82
            S + +  ++L LV    P F+
Sbjct: 657 NSSLTKTLAKLKLVTLVQP*FK 722


>TC88040 homologue to SP|Q41266|AOX2_SOYBN Alternative oxidase 2
           mitochondrial precursor (EC 1.-.-.-). [Soybean] {Glycine
           max}, partial (82%)
          Length = 1678

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = -3

Query: 10  SLLSSNPNILFSPKLSS----PPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSR 60
           SL S +PN    P+ SS    PP  S  S   +  SLP + +++PL+    +SS+
Sbjct: 707 SLASKSPNNSTQPRYSSFRNSPPSSSRSSRSISPPSLPPMASTVPLAKTSSSSSK 543


>TC82157 similar to PIR|B32372|B32372 male-specific doublesex protein -
           fruit fly (Drosophila melanogaster), partial (3%)
          Length = 921

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 19/56 (33%), Positives = 30/56 (52%)
 Frame = +3

Query: 13  SSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPLSLNRFTSSRRSFVVRAS 68
           S+N N+     + +P + SS S+ N SNSLPK   +L    +  +SS   F + A+
Sbjct: 363 SNNSNVPLKNAIPTPKN-SSFSMSNMSNSLPKPVNTLQSGSSLGSSSGSGFNLNAN 527


>TC92853 similar to GP|20268748|gb|AAM14077.1 unknown protein {Arabidopsis
           thaliana}, partial (21%)
          Length = 761

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 20/47 (42%), Positives = 27/47 (56%)
 Frame = -2

Query: 5   SAPSASLLSSNPNILFSPKLSSPPHLSSLSIPNASNSLPKLRTSLPL 51
           S PS+SL+SS+ +       SS    SS S+P++S SL     SLPL
Sbjct: 451 SLPSSSLVSSSSS-------SSSSSSSSFSLPSSSLSLSLPLVSLPL 332


>TC93245 similar to PIR|T05995|T05995 hypothetical protein F17M5.200 -
           Arabidopsis thaliana, partial (21%)
          Length = 778

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 23/64 (35%), Positives = 31/64 (47%), Gaps = 3/64 (4%)
 Frame = +2

Query: 14  SNPNILFSPKLSSPPHLSSL---SIPNASNSLPKLRTSLPLSLNRFTSSRRSFVVRASSE 70
           S+P+ LF+    SPP LSSL   S PN  N    +    P+S   F   + S     S+E
Sbjct: 206 SSPSSLFN----SPPALSSLSPSSSPNNHNPPSSIPPPAPVSSTTFLPEKLSSRSLISAE 373

Query: 71  LPLV 74
           L +V
Sbjct: 374 LAMV 385


>TC76615 homologue to SP|O22582|H2B_GOSHI Histone H2B. [Upland cotton]
           {Gossypium hirsutum}, complete
          Length = 685

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -2

Query: 3   CCSAPSASLLSSNPNILFSPKLSSPPHLSSLS-IPNASNSLPKLRTSLPLSLNRFTSSRR 61
           C   P++ L      +       S   L  L+ +P  ++SLP   + L LS  R+TSS +
Sbjct: 297 CLGEPASEL*RCRSCMFLHSSCFSSSCLRQLNHLPLVASSLPLASSLLELSRQRWTSSPQ 118

Query: 62  SFVVRASSELPLV 74
                 +S LPLV
Sbjct: 117 LVSSPLASSLPLV 79


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.134    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,170,693
Number of Sequences: 36976
Number of extensions: 112576
Number of successful extensions: 949
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of query: 265
length of database: 9,014,727
effective HSP length: 94
effective length of query: 171
effective length of database: 5,538,983
effective search space: 947166093
effective search space used: 947166093
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)


Medicago: description of AC146630.11