BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146590.9 - phase: 0 /pseudo
(183 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC93236 weakly similar to PIR|E96671|E96671 hypothetical protein... 135 1e-32
TC81502 similar to PIR|E86440|E86440 hypothetical protein AAG278... 118 1e-27
TC83242 weakly similar to PIR|E96671|E96671 hypothetical protein... 113 5e-26
TC84933 similar to GP|14532550|gb|AAK64003.1 AT3g61820/F15G16_21... 108 7e-25
TC89288 weakly similar to GP|21740390|emb|CAD40869. OSJNBa0064H2... 109 7e-25
TC78047 similar to PIR|T02706|T02706 hypothetical protein At2g03... 107 3e-24
BQ149080 weakly similar to PIR|E86440|E864 hypothetical protein ... 100 8e-23
TC86488 similar to GP|9665144|gb|AAF97328.1| Unknown protein {Ar... 91 3e-19
TC87414 weakly similar to GP|11994113|dbj|BAB01116. CND41 chlor... 82 2e-16
BG453901 similar to GP|15983376|gb AT3g59080/F17J16_130 {Arabido... 72 9e-14
TC91887 weakly similar to PIR|E96671|E96671 hypothetical protein... 66 1e-13
TC82441 similar to GP|14532702|gb|AAK64152.1 unknown protein {Ar... 71 2e-13
TC83406 weakly similar to GP|19699359|gb|AAL91289.1 At1g79720/F1... 67 3e-12
TC77221 weakly similar to PIR|T01996|T01996 nucleoid DNA-binding... 65 2e-11
TC86774 similar to PIR|T06000|T06000 aspartic proteinase homolog... 65 2e-11
BQ146984 weakly similar to PIR|C84682|C846 hypothetical protein ... 64 3e-11
BG648486 similar to PIR|T45858|T45 hypothetical protein F3A4.130... 60 5e-10
CB066657 similar to PIR|T45858|T45 hypothetical protein F3A4.130... 60 5e-10
TC79170 similar to GP|10177232|dbj|BAB10606. protease-like prote... 59 1e-09
TC77266 similar to GP|9759559|dbj|BAB11161.1 nucleoid DNA-bindin... 58 2e-09
>TC93236 weakly similar to PIR|E96671|E96671 hypothetical protein F13O11.13
[imported] - Arabidopsis thaliana, partial (7%)
Length = 631
Score = 135 bits (339), Expect = 1e-32
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 8/175 (4%)
Frame = +2
Query: 1 MNTCSLLILFYFSLCFIISLSHALN----NGFSVELIHRDSSKSPLYQPTQNKYQHIVNA 56
++T I + +LC + + S + +GF VELIH DS SP Y + + I NA
Sbjct: 8 LSTMHAFIFLFSALCSLYTPSFVESTKNPSGFEVELIHHDSPLSPFYNSSLTSSELITNA 187
Query: 57 ARRSINRANH---FYKTALTNTPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWL 113
A RSI+R+ F L +P+S +IP+ G+YLM +GTPP + +ADTGS+++W+
Sbjct: 188 ALRSISRSKRLSLFQNNELNESPESIIIPNGGDYLMKIYIGTPPVERLAVADTGSNLIWV 367
Query: 114 QCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDLCKSGQQGA-VCTDQNFCEYSIL 167
QC PCK+C+ Q P F P+KSSTY + C S C S G C CEY I+
Sbjct: 368 QCSPCKKCFPQDKPYFDPNKSSTYMGLSCDSQSCSSLPLGKHRCGKSKKCEYLII 532
>TC81502 similar to PIR|E86440|E86440 hypothetical protein AAG27891.1
[imported] - Arabidopsis thaliana, partial (22%)
Length = 828
Score = 118 bits (296), Expect = 1e-27
Identities = 65/167 (38%), Positives = 93/167 (54%), Gaps = 7/167 (4%)
Frame = +2
Query: 6 LLILFYFSLCFIISLSHALNNGFSVELIHRDSSKSPLYQPTQNKYQHIVNAARRSINRAN 65
+L LF S I + + +GFSV+LIHRDS SP Y P+ +K I NAA RS R
Sbjct: 23 ILALFSLSSTLFIIEASKIQSGFSVDLIHRDSPMSPFYNPSMSKLDLIRNAAFRSKTRLT 202
Query: 66 HFYKTA--LTN----TPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCK 119
F + L+N + +S + P++G+YLM +GTPP + I DTGSD+ W+QC PC
Sbjct: 203 RFSHSLSLLSNENFQSTESIIKPNNGDYLMRIYIGTPPVEKLAIFDTGSDLTWVQCSPCI 382
Query: 120 ECYNQTTPKFKPSKSSTYKNIPCSSDLCK-SGQQGAVCTDQNFCEYS 165
C+ Q TP + +KSS++ N+ C + C ++ C C YS
Sbjct: 383 NCFAQDTPLYDRTKSSSHTNLTCDTQSCTLLPKKQQFCGKSQECLYS 523
>TC83242 weakly similar to PIR|E96671|E96671 hypothetical protein F13O11.13
[imported] - Arabidopsis thaliana, partial (15%)
Length = 485
Score = 113 bits (282), Expect = 5e-26
Identities = 57/148 (38%), Positives = 82/148 (54%), Gaps = 4/148 (2%)
Frame = +2
Query: 4 CSLLILFYFSLCFIISLSHALNNGFSVELIHRDSSKSPLYQPTQNKYQHIVNAARRSINR 63
C L LF + + A N GFS +LIH++S SP Y+ N + N+
Sbjct: 47 CFHLFLFVLFTFLSQTPTEAYNKGFSFKLIHKNSPNSPFYK--SNNFHK---------NK 193
Query: 64 ANHFY----KTALTNTPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCK 119
FY K+ + +P + V ++G+YLM ++G+PP +YG+ DTGSD+VW QC PC
Sbjct: 194 LRSFYQVPKKSFVQKSPYTRVTSNNGDYLMKLTLGSPPVDIYGLVDTGSDLVWAQCTPCG 373
Query: 120 ECYNQTTPKFKPSKSSTYKNIPCSSDLC 147
CY Q +P F+P +S TY IPC S+ C
Sbjct: 374 GCYRQKSPMFEPLRSKTYSPIPCESEQC 457
>TC84933 similar to GP|14532550|gb|AAK64003.1 AT3g61820/F15G16_210
{Arabidopsis thaliana}, partial (9%)
Length = 640
Score = 108 bits (270), Expect(2) = 7e-25
Identities = 50/71 (70%), Positives = 57/71 (79%)
Frame = +1
Query: 96 PPFKLYGIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDLCKSGQQGAV 155
PP K YGI DTGSDIV LQCEPC++CYNQTTPKF PSKSS+YKNI CSS LC+S + +
Sbjct: 1 PPIKSYGIVDTGSDIVRLQCEPCEQCYNQTTPKFNPSKSSSYKNISCSSKLCQSVRDTS- 177
Query: 156 CTDQNFCEYSI 166
C D+ CEYSI
Sbjct: 178 CNDKKNCEYSI 210
Score = 21.6 bits (44), Expect(2) = 7e-25
Identities = 11/17 (64%), Positives = 12/17 (69%)
Frame = +2
Query: 167 LMVIIHNRKEILVLILL 183
+M I H KEILVL LL
Sbjct: 212 IMAINHIHKEILVLRLL 262
>TC89288 weakly similar to GP|21740390|emb|CAD40869. OSJNBa0064H22.14 {Oryza
sativa}, partial (22%)
Length = 1358
Score = 109 bits (272), Expect = 7e-25
Identities = 62/157 (39%), Positives = 78/157 (49%)
Frame = +3
Query: 9 LFYFSLCFIISLSHALNNGFSVELIHRDSSKSPLYQPTQNKYQHIVNAARRSINRANHFY 68
L +L F++S A N+GFSV+LI R+SS Y+P+
Sbjct: 87 LAIIALLFLLSSIGAHNDGFSVKLIRRNSSHDS-YKPS---------------------- 197
Query: 69 KTALTNTPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPK 128
T QS V EYLM S+GTPP K+Y ADTGSD+VW QC PC +CY Q P
Sbjct: 198 ------TIQSPVSAYDCEYLMELSIGTPPIKIYAEADTGSDLVWFQCIPCTKCYKQQNPM 359
Query: 129 FKPSKSSTYKNIPCSSDLCKSGQQGAVCTDQNFCEYS 165
F P SS+Y NI C ++ C TDQ C Y+
Sbjct: 360 FDPRSSSSYTNITCGTESCNKLDSSLCSTDQKTCNYT 470
>TC78047 similar to PIR|T02706|T02706 hypothetical protein At2g03200
[imported] - Arabidopsis thaliana, partial (67%)
Length = 1727
Score = 107 bits (266), Expect = 3e-24
Identities = 64/175 (36%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Frame = +2
Query: 4 CSLLILFYFSLCFII--------SLSH--ALNNGFSVELIHRDSSKSPLYQPTQNKYQHI 53
C +L+ ++ F+ SL+H GF + L H DS K+ + QH
Sbjct: 263 CVMLVTLLVTILFVHPTFSTSRGSLNHHQISQGGFRITLRHVDSGKN---LTKLERVQHG 433
Query: 54 VNAARRSINRANHFYKTALTNTPQSTV-IPDH---GEYLMTYSVGTPPFKLYGIADTGSD 109
+N + R N + T S V P H GEYLM S+GTPP + DTGSD
Sbjct: 434 INRGHSRLQRLNAMVLASSTTEDSSQVEAPVHAGNGEYLMELSIGTPPISYPAVLDTGSD 613
Query: 110 IVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDLCKSGQQGAVCTDQNFCEY 164
++W QCEPC +CY Q TP F P KSST+ + CSS+LC + C++ N C Y
Sbjct: 614 LIWTQCEPCSQCYKQPTPIFDPKKSSTFSKLSCSSNLC-NALPSPTCSN-NGCNY 772
>BQ149080 weakly similar to PIR|E86440|E864 hypothetical protein AAG27891.1
[imported] - Arabidopsis thaliana, partial (10%)
Length = 280
Score = 100 bits (250), Expect(2) = 8e-23
Identities = 46/65 (70%), Positives = 53/65 (80%)
Frame = +3
Query: 102 GIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDLCKSGQQGAVCTDQNF 161
GIADTGSDIVWLQCEPC++CYNQTTP F PSKSS+YKNIPC S LC S + + C+DQN
Sbjct: 27 GIADTGSDIVWLQCEPCEQCYNQTTPIFNPSKSSSYKNIPCLSKLCHSVRDTS-CSDQNS 203
Query: 162 CEYSI 166
+Y I
Sbjct: 204 XQYKI 218
Score = 22.3 bits (46), Expect(2) = 8e-23
Identities = 10/17 (58%), Positives = 13/17 (75%)
Frame = +1
Query: 166 ILMVIIHNRKEILVLIL 182
++M I+H KEILV IL
Sbjct: 217 LVMEILHIHKEILVXIL 267
>TC86488 similar to GP|9665144|gb|AAF97328.1| Unknown protein {Arabidopsis
thaliana}, partial (74%)
Length = 1753
Score = 90.5 bits (223), Expect = 3e-19
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +3
Query: 30 VELIHRDSSKSPLYQPTQNKYQHIVNAARRSINRAN-HFYKTALTNTPQSTVIPDHGEYL 88
++ + D + L+ + V + ++N+ H T +++ S + GEY
Sbjct: 276 IDTLSSDKTPQQLFHLRLQRDAARVESFATALNKTRPHRSATGFSSSIVSGLSQGSGEYF 455
Query: 89 MTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDLCK 148
VGTP ++ + DTGSD+VWLQC PC++CY+Q P F P+KS +Y IPC + LC+
Sbjct: 456 TRIGVGTPARYVFMVLDTGSDVVWLQCAPCRKCYSQADPVFDPTKSRSYAGIPCGAPLCR 635
Query: 149 SGQQGAVCTDQNFCEYSI 166
T C+Y +
Sbjct: 636 RLDTAGCNTKTKVCQYQV 689
>TC87414 weakly similar to GP|11994113|dbj|BAB01116. CND41 chloroplast
nucleoid DNA binding protein-like {Arabidopsis
thaliana}, partial (44%)
Length = 1140
Score = 81.6 bits (200), Expect = 2e-16
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +1
Query: 85 GEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCSS 144
GEY +G PP Y + DTGSD+ W+QC+PC ECY QT P + P+ SSTY+ + C +
Sbjct: 505 GEYFSRLGIGQPPKPYYMVLDTGSDVNWIQCKPCTECYQQTDPIYDPTSSSTYQPMTCEA 684
Query: 145 DLCKSGQQGAVCTDQNFCEYSI 166
+ C+S + C D C+Y +
Sbjct: 685 EQCQSLELSG-CRDGK-CQYQV 744
>BG453901 similar to GP|15983376|gb AT3g59080/F17J16_130 {Arabidopsis
thaliana}, partial (21%)
Length = 642
Score = 72.4 bits (176), Expect = 9e-14
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +2
Query: 68 YKTALTNTPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTP 127
Y + L T +S V GEY M +GTPP I DTGSD+ W+QC PC C+ Q+ P
Sbjct: 398 YSSQLVATLESGVSLGSGEYFMDVFIGTPPKHYSLILDTGSDLNWIQCVPCIACFEQSGP 577
Query: 128 KFKPSKSSTYKNIPC 142
+ P +SS+++NI C
Sbjct: 578 YYDPKESSSFENITC 622
>TC91887 weakly similar to PIR|E96671|E96671 hypothetical protein F13O11.13
[imported] - Arabidopsis thaliana, partial (32%)
Length = 1011
Score = 66.2 bits (160), Expect(2) = 1e-13
Identities = 29/44 (65%), Positives = 34/44 (76%)
Frame = +2
Query: 122 YNQTTPKFKPSKSSTYKNIPCSSDLCKSGQQGAVCTDQNFCEYS 165
YNQTTP F PSKSS+YKNIPC S LC+S + C D+N+CEYS
Sbjct: 2 YNQTTPMFNPSKSSSYKNIPCPSKLCQS-MEDTSCNDKNYCEYS 130
Score = 26.2 bits (56), Expect(2) = 1e-13
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 166 ILMVIIHNRKEILVLILL 183
++MVIIH ++EILVL LL
Sbjct: 132 LIMVIIHIQEEILVLTLL 185
>TC82441 similar to GP|14532702|gb|AAK64152.1 unknown protein {Arabidopsis
thaliana}, partial (21%)
Length = 809
Score = 71.2 bits (173), Expect = 2e-13
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = +2
Query: 93 VGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDLC 147
VG+PP Y D+GSDI+W+QC+PC +CY+Q+ P F P SS+Y + C S +C
Sbjct: 617 VGSPPKNQYVGVDSGSDIIWVQCQPCTQCYHQSDPVFNPEDSSSYAGVSCGSTVC 781
>TC83406 weakly similar to GP|19699359|gb|AAL91289.1 At1g79720/F19K16_30
{Arabidopsis thaliana}, partial (51%)
Length = 1197
Score = 67.4 bits (163), Expect = 3e-12
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Frame = +2
Query: 87 YLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDL 146
Y++T +G + I DTGSD+ W+QC+PC CY+Q P F PS SS+Y ++ C+S
Sbjct: 413 YIVTIGLGNQNMTV--IIDTGSDLTWVQCDPCMSCYSQQGPVFNPSNSSSYNSLLCNSST 586
Query: 147 CKSGQ----QGAVCTDQN--FCEYSI 166
C++ Q C N C Y++
Sbjct: 587 CQNLQFTTGNTETCESNNPSSCNYTV 664
>TC77221 weakly similar to PIR|T01996|T01996 nucleoid DNA-binding protein
cnd41 chloroplast - common tobacco, partial (63%)
Length = 2150
Score = 65.1 bits (157), Expect = 2e-11
Identities = 34/88 (38%), Positives = 44/88 (49%), Gaps = 6/88 (6%)
Frame = +1
Query: 85 GEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPC-KECYNQTTPKFKPSKSSTYKNIPCS 143
G Y + +GTP L I DTGSD+ W QC+PC CY Q + P+KS++Y NI C+
Sbjct: 586 GNYFVVLGLGTPKKDLSLIFDTGSDLTWTQCQPCVGSCYKQQDEIYDPTKSTSYYNITCT 765
Query: 144 SDLC-----KSGQQGAVCTDQNFCEYSI 166
S C +G N C Y I
Sbjct: 766 SSDCTQLSSATGNDPRCAKVSNACVYGI 849
>TC86774 similar to PIR|T06000|T06000 aspartic proteinase homolog F17M5.250
- Arabidopsis thaliana, partial (81%)
Length = 1895
Score = 64.7 bits (156), Expect = 2e-11
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = +2
Query: 85 GEYLMTYSVGTPPFKLYGIADTGSDIVWLQCE-PCKECYNQTTPKFKPSKSSTYKNIPCS 143
G Y +T ++G PP + DTGS++ WLQC+ PC +C P +KPS IPC
Sbjct: 575 GFYNVTLNIGQPPRPYFLDVDTGSELTWLQCDAPCSQCSETPHPLYKPSNDF----IPCK 742
Query: 144 SDLCKSGQ--QGAVCTDQNFCEYSI 166
LC S Q C D N C+Y I
Sbjct: 743 DPLCASLQPTDDYTCEDPNQCDYEI 817
>BQ146984 weakly similar to PIR|C84682|C846 hypothetical protein At2g28220
[imported] - Arabidopsis thaliana, partial (5%)
Length = 719
Score = 63.9 bits (154), Expect = 3e-11
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Frame = +3
Query: 28 FSVELIHR---DSSKSPLYQPTQNKYQHIVNAARRSINRANHFYKTALTNT----PQS-- 78
FS++LI R DS P + K+ +V ++ H K + NT PQ+
Sbjct: 78 FSMKLIPRVNFDSILFPKNISLEEKHNRLVQLSKI------HALKYQMNNTNAISPQTFQ 239
Query: 79 TVIPDHGE-YLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTY 137
++P Y + +GTPPF + DTGS W+QC C +C+ FK S+T+
Sbjct: 240 PLVPTISNIYAVEMRIGTPPFTTLLMFDTGSSDTWVQCLGCTKCFPLKGENFKYQASNTF 419
Query: 138 KNIPCSSDLCKSGQQGAVCTDQNFCEYSI 166
K +PC LC + C+D CEY+I
Sbjct: 420 KEVPCEHPLCDPKK----CSDGK-CEYAI 491
>BG648486 similar to PIR|T45858|T45 hypothetical protein F3A4.130 -
Arabidopsis thaliana, partial (34%)
Length = 795
Score = 60.1 bits (144), Expect = 5e-10
Identities = 27/82 (32%), Positives = 40/82 (47%)
Frame = +3
Query: 84 HGEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPKFKPSKSSTYKNIPCS 143
+G Y +GTPP + I DTGS + ++ C C+ C PKF+P S TY+ + C+
Sbjct: 156 NGYYTTRLWIGTPPQRFALIVDTGSTVTYVPCSTCEHCGRHQDPKFQPDLSETYQPVKCT 335
Query: 144 SDLCKSGQQGAVCTDQNFCEYS 165
D G D+ + E S
Sbjct: 336 PDCNCDGDTNQCMYDRQYAEMS 401
>CB066657 similar to PIR|T45858|T45 hypothetical protein F3A4.130 -
Arabidopsis thaliana, partial (25%)
Length = 782
Score = 60.1 bits (144), Expect = 5e-10
Identities = 39/158 (24%), Positives = 67/158 (41%), Gaps = 1/158 (0%)
Frame = +1
Query: 9 LFYFSLCFIISLSHALNNGFSVELIHRDSSKSPLYQPTQNKYQHIVNAARRSINRANHFY 68
L + L I+ ++H + + + PLY T N ++ R+ + +
Sbjct: 100 LTHLILILILHITHTIAGDTAFLRNRHHAMILPLYLTTPNSSTSALDPRRQLHGSESKRH 279
Query: 69 KTALTNTPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPK 128
A ++ +G Y +GTPP I DTGS + ++ C C++C PK
Sbjct: 280 PNARMRLHDDLLL--NGYYTTRLWIGTPPQMFALIVDTGSTVTYVPCSTCEQCGRHQDPK 453
Query: 129 FKPSKSSTYKNIPCSSDLCKSGQQGAVCT-DQNFCEYS 165
F+P SSTY+ + C+ D C C ++ + E S
Sbjct: 454 FQPDLSSTYQPVKCTLD-CNCDNDRMQCVYERQYAEMS 564
>TC79170 similar to GP|10177232|dbj|BAB10606. protease-like protein
{Arabidopsis thaliana}, partial (65%)
Length = 1607
Score = 58.9 bits (141), Expect = 1e-09
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Frame = +2
Query: 85 GEYLMTYSVGTPPFKLYGIADTGSDIVWLQCEPCKECYNQTTPK-----FKPSKSSTYKN 139
G Y +GTPP + Y DTGSD++W+ C C C + + F P SST
Sbjct: 641 GLYFTKVLLGTPPVEFYVQIDTGSDVLWVSCSSCNGCPQTSGLQIELNFFDPRSSSTSSL 820
Query: 140 IPCSSDLCKSGQQG--AVCTDQ-NFCEYS 165
I CS C SG Q A C+ Q N C Y+
Sbjct: 821 ISCSDKRCNSGIQSSDATCSGQTNQCSYT 907
>TC77266 similar to GP|9759559|dbj|BAB11161.1 nucleoid DNA-binding-like
protein {Arabidopsis thaliana}, partial (90%)
Length = 1604
Score = 58.2 bits (139), Expect = 2e-09
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +1
Query: 7 LILFYFSLCFIISLSHAL-------NNGFSVELIHRDSSKSPLYQPTQ--NKYQHIVNAA 57
+ L F LC ISL A ++G ++++ H S SP ++P++ + + ++N
Sbjct: 28 IFLTPFLLCLFISLVQAQTPKCDIQDDGSTLKVFHIFSQCSP-FKPSKPMSWEESVLNLQ 204
Query: 58 RRSINRANHFY----KTALTNTPQSTVIPDHGEYLMTYSVGTPPFKLYGIADTGSDIVWL 113
+ R +F + ++ + I Y++ GTPP L DT SD W+
Sbjct: 205 AKDQARMQYFSSLVARKSVVPIASARQIIQSPTYIVKAKFGTPPQTLLLALDTSSDAAWI 384
Query: 114 QCEPCKECYNQTTPKFKPSKSSTYKNIPCSSDLCK 148
C C C T+ F P KS++++N+ C S CK
Sbjct: 385 PCSGCVGC--STSKPFAPIKSTSFRNVSCGSPHCK 483
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.322 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,545,609
Number of Sequences: 36976
Number of extensions: 124597
Number of successful extensions: 860
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of query: 183
length of database: 9,014,727
effective HSP length: 90
effective length of query: 93
effective length of database: 5,686,887
effective search space: 528880491
effective search space used: 528880491
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Medicago: description of AC146590.9