TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146588.13 - phase: 0 
         (107 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC86270 similar to GP|15293161|gb|AAK93691.1 unknown protein {Ar...   106  6e-41
TC88196 similar to GP|18650639|gb|AAL75889.1 AT4g27020/F10M23_36...   101  5e-31
TC90572 similar to SP|Q9HZN2|YT72_PSEAE Maf-like protein PA2972....    32  0.038
TC76781 similar to GP|12539609|gb|AAG59584.1 pathogen-inducible ...    28  0.55
TC86326 similar to GP|6016680|gb|AAF01507.1| putative leucoantho...    26  2.7
TC88575 weakly similar to GP|21554034|gb|AAM63115.1 unknown {Ara...    25  6.1
TC87434 similar to SP|P52902|ODPA_PEA Pyruvate dehydrogenase E1 ...    24  7.9

>TC86270 similar to GP|15293161|gb|AAK93691.1 unknown protein {Arabidopsis
           thaliana}, partial (89%)
          Length = 2204

 Score =  106 bits (265), Expect(2) = 6e-41
 Identities = 52/60 (86%), Positives = 53/60 (87%), Gaps = 3/60 (5%)
 Frame = +2

Query: 50  DPADVHSGDFLAVSKICGRWGGFETLEKLVT---ADHAAVCLKDEMGSLWVGESGHENEK 106
           DPADVHSGDFLAVSKI GRWGGFETLEK VT   A H AVCLKDEMG+LWVGESGHENEK
Sbjct: 713 DPADVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDEMGNLWVGESGHENEK 892



 Score = 75.5 bits (184), Expect(2) = 6e-41
 Identities = 36/51 (70%), Positives = 40/51 (77%), Gaps = 3/51 (5%)
 Frame = +1

Query: 1   MPSGMLGTLLSQIDAVPLFSDTAWGHKVNLDFLNKHMGAT---RSQPWRAT 48
           MP+GMLGTLLS +D +PLFS+TAWG   NL FL KHMGAT   R QPWRAT
Sbjct: 556 MPAGMLGTLLSLVDVLPLFSNTAWGQSSNLQFLKKHMGATFEKRIQPWRAT 708


>TC88196 similar to GP|18650639|gb|AAL75889.1 AT4g27020/F10M23_360
           {Arabidopsis thaliana}, partial (96%)
          Length = 1810

 Score =  101 bits (251), Expect(2) = 5e-31
 Identities = 49/80 (61%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
 Frame = +1

Query: 1   MPSGMLGTLLSQIDAVPLFSDTAWGHKVNLDFLNKHMGA---TRSQPWRATTDPADVHSG 57
           M +GMLGTL +  +  PLF++T WG K N+ F+ KHMGA   TRSQPW       D+HSG
Sbjct: 574 MKAGMLGTLQALWEVFPLFTNTGWGEKSNIGFMEKHMGASFETRSQPWVTNISVDDIHSG 753

Query: 58  DFLAVSKICGRWGGFETLEK 77
           DFLAVSKI GRWG FETLEK
Sbjct: 754 DFLAVSKIRGRWGAFETLEK 813



 Score = 47.8 bits (112), Expect(2) = 5e-31
 Identities = 20/26 (76%), Positives = 21/26 (79%)
 Frame = +2

Query: 81  ADHAAVCLKDEMGSLWVGESGHENEK 106
           A H AVCL+D  G LWVGESGHENEK
Sbjct: 833 AGHTAVCLRDSDGKLWVGESGHENEK 910


>TC90572 similar to SP|Q9HZN2|YT72_PSEAE Maf-like protein PA2972.
           {Pseudomonas aeruginosa}, partial (73%)
          Length = 451

 Score = 32.0 bits (71), Expect = 0.038
 Identities = 14/32 (43%), Positives = 20/32 (61%)
 Frame = +2

Query: 25  GHKVNLDFLNKHMGATRSQPWRATTDPADVHS 56
           G +V  + ++KH GA R+QP R  TDP   H+
Sbjct: 317 GRRVGGEPVSKHRGAGRNQPGRPATDPTGGHA 412


>TC76781 similar to GP|12539609|gb|AAG59584.1 pathogen-inducible
           alpha-dioxygenase {Nicotiana attenuata}, partial (94%)
          Length = 2232

 Score = 28.1 bits (61), Expect = 0.55
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +2

Query: 54  VHSGDFLAVS-KICGRWGGFETLEKLVTADHAAVC--LKDEMGSL 95
           +H+ D  A+S  I   W G  TL+ L   +H AVC  LK E   L
Sbjct: 815 LHNEDGTAISGDIRNSWAGVTTLQTLFVLEHNAVCDSLKKEYPDL 949


>TC86326 similar to GP|6016680|gb|AAF01507.1| putative leucoanthocyanidin
           dioxygenase {Arabidopsis thaliana}, partial (81%)
          Length = 1686

 Score = 25.8 bits (55), Expect = 2.7
 Identities = 14/47 (29%), Positives = 20/47 (41%)
 Frame = +2

Query: 50  DPADVHSGDFLAVSKICGRWGGFETLEKLVTADHAAVCLKDEMGSLW 96
           D  DVH+     +S  C  WG F+ +   V+ D     L D+    W
Sbjct: 431 DDLDVHASILKQISDACRDWGFFQIVNHGVSPD-----LMDKARETW 556


>TC88575 weakly similar to GP|21554034|gb|AAM63115.1 unknown {Arabidopsis
           thaliana}, partial (76%)
          Length = 917

 Score = 24.6 bits (52), Expect = 6.1
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -1

Query: 18  LFSDTAWGHKVNLDFLNK-HMGATRSQPWR 46
           ++SDT W  K+ L+   K H+ A    PW+
Sbjct: 773 IYSDTDWAIKMKLNISTKHHVNAIIRFPWQ 684


>TC87434 similar to SP|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component
           alpha subunit  mitochondrial precursor (EC 1.2.4.1)
           (PDHE1-A)., complete
          Length = 1829

 Score = 24.3 bits (51), Expect = 7.9
 Identities = 12/34 (35%), Positives = 17/34 (49%)
 Frame = +2

Query: 34  NKHMGATRSQPWRATTDPADVHSGDFLAVSKICG 67
           N H G   ++ WRA   PA    GD++   K+ G
Sbjct: 917 NNHYGMGTAE-WRAAKSPAYYKRGDYVPGLKVDG 1015


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.134    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,448,325
Number of Sequences: 36976
Number of extensions: 39973
Number of successful extensions: 148
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of query: 107
length of database: 9,014,727
effective HSP length: 83
effective length of query: 24
effective length of database: 5,945,719
effective search space: 142697256
effective search space used: 142697256
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)