TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146588.1 - phase: 0 /pseudo
         (191 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG644693 weakly similar to GP|18767374|g Putative 22 kDa kafirin...    32  0.12
TC86737 weakly similar to GP|6683624|dbj|BAA89272.1 Pol {Alterna...    31  0.34
TC77304 similar to GP|10177347|dbj|BAB10690. peptidylprolyl isom...    27  6.3
TC93503 weakly similar to GP|9294296|dbj|BAB02198.1 contains sim...    26  8.3

>BG644693 weakly similar to GP|18767374|g Putative 22 kDa kafirin cluster;
           Ty3-Gypsy type {Oryza sativa}, partial (15%)
          Length = 716

 Score = 32.3 bits (72), Expect = 0.12
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +2

Query: 2   IDDLMDHLAGACVISKIEFRSRYH*IQAKLEDLPKTAFR 40
           ID+L D+L G+    KI+ R   H  +   ED+PKTAFR
Sbjct: 290 IDELFDNLQGSKWFFKIDLRLG*HQHRVIGEDVPKTAFR 406


>TC86737 weakly similar to GP|6683624|dbj|BAA89272.1 Pol {Alternaria
           alternata}, partial (21%)
          Length = 1540

 Score = 30.8 bits (68), Expect = 0.34
 Identities = 15/41 (36%), Positives = 26/41 (62%)
 Frame = +1

Query: 2   IDDLMDHLAGACVISKIEFRSRYH*IQAKLEDLPKTAFRTQ 42
           I + +  +AGA   +K++  + +H ++ K ED  KTAFRT+
Sbjct: 682 ISETLRRVAGARWFTKLDVVAAFHKMRIKDEDQEKTAFRTR 804


>TC77304 similar to GP|10177347|dbj|BAB10690. peptidylprolyl isomerase
           {Arabidopsis thaliana}, partial (74%)
          Length = 1627

 Score = 26.6 bits (57), Expect = 6.3
 Identities = 11/29 (37%), Positives = 17/29 (57%)
 Frame = +3

Query: 147 LVTRLTRKGQHMCGIGNAKKIFKSLKRS* 175
           L  R  +KG H   +GN +K+ K ++R *
Sbjct: 903 LQVRRKKKGMHCSKLGNMQKLLKDMRRQ* 989


>TC93503 weakly similar to GP|9294296|dbj|BAB02198.1 contains similarity to
           alpha galactosidase~gene_id:F20C19.10 {Arabidopsis
           thaliana}, partial (12%)
          Length = 935

 Score = 26.2 bits (56), Expect = 8.3
 Identities = 16/35 (45%), Positives = 18/35 (50%), Gaps = 3/35 (8%)
 Frame = +3

Query: 115 GCNVCNGRLPRWLRK*VEYHRRFIKE---SLQIAL 146
           GCN  N  L RW  K   Y +RF +    SLQI L
Sbjct: 207 GCNQPNESLLRWFYKTKRYFQRFEESHIFSLQIGL 311


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.365    0.164    0.594 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,667,549
Number of Sequences: 36976
Number of extensions: 73395
Number of successful extensions: 690
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 690
length of query: 191
length of database: 9,014,727
effective HSP length: 91
effective length of query: 100
effective length of database: 5,649,911
effective search space: 564991100
effective search space used: 564991100
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.6 bits)
S2: 55 (25.8 bits)