TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146583.2 + phase: 0 /pseudo
         (577 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG644741                                                               85  7e-17
BG580885                                                               62  6e-10
BG587150 similar to GP|13592175|gb ppg3 {Leishmania major}, part...    55  1e-07
AL366605                                                               45  8e-05
BE999414                                                               37  0.016
TC79789 similar to PIR|D96519|D96519 mysoin-like protein  11013-...    34  0.13
BE997611                                                               31  1.5
TC87382 similar to EGAD|146423|156195 vitellogenin {Anolis pulch...    31  1.5
TC89913 similar to PIR|H96569|H96569 unknown protein  54928-5675...    30  1.9
TC85902 similar to SP|Q9XF97|RL4_PRUAR 60S ribosomal protein L4 ...    29  5.7

>BG644741 
          Length = 735

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 40/109 (36%), Positives = 58/109 (52%)
 Frame = -2

Query: 35  LHLFPFSLRDRASAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRFNQKDGE 94
           L +FP SL   A  WF  L   SI +W+ +R  FLAR++P SK     D++  F    GE
Sbjct: 587 LRVFPLSLMGEADIWFTELPYNSIFTWNQLRDVFLARYYPVSKKLNHNDRVNNFVALPGE 408

Query: 95  SLYEAWEHFKEMLRLCPHHGLEKWLIVHTFYNGLSDTTKMSVDAAAGGA 143
           S+  +W+ F   LR  P+H ++   +   FY G  D  K+ +D  AGG+
Sbjct: 407 SVSSSWDRFTSFLRSVPNHRIDDDSLKEYFYRGQDDNNKVVLDTIAGGS 261


>BG580885 
          Length = 609

 Score = 62.0 bits (149), Expect = 6e-10
 Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
 Frame = +3

Query: 4   FSGSPTEDPNLHISSFLRLSGTIKENQEAVRLHLFPFSLRDRASAWFH-SLEVGSIT-SW 61
           F G+P E P  H+S F ++      +   ++  +FP +L + ++ W+  ++E   I+ SW
Sbjct: 54  FRGTPNESPITHLSRFNKVCRANNASSVEMQKKIFPVTLEEESALWYDLNIEPYYISLSW 233

Query: 62  DDMRRAFLARFFPPSKTAKLRDQITRFNQKDGESLYEAWEHFKEMLRLCPHHGLEKWLIV 121
           D+++ +FL  ++      +LR ++   +Q + E +   +   + +L+  P HGLE  +I 
Sbjct: 234 DEIKLSFLQAYYEIEPVEELRSELMGIHQGEKERVRSYFLRLQWILKRWPEHGLEDDVIK 413

Query: 122 HTFYNGLSD 130
             F NGL +
Sbjct: 414 GVFVNGLRE 440


>BG587150 similar to GP|13592175|gb ppg3 {Leishmania major}, partial (1%)
          Length = 754

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
 Frame = +2

Query: 396 FGEALSRMPLYTKFLKEIFSKKKAMDHKETIALTRESSAIVKKQPPKLR---------DP 446
           F + +  +PL   F +  F+ +  M  +ET     +   +  +   K++         D 
Sbjct: 167 FQKRVFMIPLEKPFEEAYFTHRLWMFFRETRETEEDIRRMFCEAREKMKKRITLKKKSDS 346

Query: 447 GSFVIPCVIGKETVDKALCDLGASVSLLPLSLFKRMGIGELKPTEMILKLADRSTIPLVG 506
           G F I   +       ALC+ GASV +LP  +   +G+ ++ P++      D S     G
Sbjct: 347 GKFAISWTMKGIEFPHALCNTGASVIILPRDMADHLGL-KVDPSKESFTFVDCSQRSSGG 523

Query: 507 YIEDIPVKIEGIYIPTDFVVVDIEEDHDVPIILGRPFLAT 546
            I D+ V+I    +P DF V+DI+ + +  ++L R FL+T
Sbjct: 524 IIRDLEVQIGNALVPVDFHVLDIKINWNSSLLLRRAFLST 643


>AL366605 
          Length = 422

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 25/87 (28%), Positives = 46/87 (52%)
 Frame = -3

Query: 12  PNLHISSFLRLSGTIKENQEAVRLHLFPFSLRDRASAWFHSLEVGSITSWDDMRRAFLAR 71
           P  HI  ++R  G  K+N +++ +H F  SL + A+ W+ SL    I ++D++  AF + 
Sbjct: 291 PQNHIIKYVRKMGNYKDN-DSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKSH 115

Query: 72  FFPPSKTAKLRDQITRFNQKDGESLYE 98
           +   ++    R+ +   +QK  ES  E
Sbjct: 114 YGFNTRLKPNREFLRSLSQKKEESFRE 34


>BE999414 
          Length = 613

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 22/64 (34%), Positives = 33/64 (51%)
 Frame = +3

Query: 9  TEDPNLHISSFLRLSGTIKENQEAVRLHLFPFSLRDRASAWFHSLEVGSITSWDDMRRAF 68
          T DP+ H+ + + +  T +  + AV+  LF  +LR  A  WF +L   SI SW D+   F
Sbjct: 27 T*DPDEHMEN-IEVVLTYRSVRGAVKCKLFVTTLRRGAMTWFKNLRRNSIGSWGDLCHEF 203

Query: 69 LARF 72
             F
Sbjct: 204TTHF 215


>TC79789 similar to PIR|D96519|D96519 mysoin-like protein  11013-7318
           [imported] - Arabidopsis thaliana, partial (21%)
          Length = 1097

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 44/185 (23%), Positives = 79/185 (41%), Gaps = 5/185 (2%)
 Frame = +3

Query: 210 RPNQNFYKNPQGSYGQTAPPGYTNNQRVAQKSSLEILLENCMMNQNKQLQELKNQTGSLN 269
           +PNQ+ YK P  +Y Q +   Y++             LE+ +    ++ Q L+++   LN
Sbjct: 312 QPNQDVYKKP--NYVQISVESYSHLTG----------LEDQVKTYEEKAQTLEDEINELN 455

Query: 270 DSLSKLNTKVDS----IATHTKMLETQISQVAQQVAISS*TPGVFPGQTETNPKAHVNAI 325
           + LS  NT++++    +  H K+ E  +S   +  A +          T +   A   A 
Sbjct: 456 EKLSAANTEINTKEALVKQHAKVAEEAVSGWEKAEAEALALKNSLESVTLSKLTAEDQAS 635

Query: 326 SLGGNKLEDTITKAKSVKGESVKLLGEKDAIKT-LLDKNKALNPLRLTKLNLEAQFAKFL 384
            L G  L++ + + +++K E    + +    KT  LDK K          +LEA+   F 
Sbjct: 636 QLDG-ALKECMRQIRNLKEEHELKIQDISLAKTKQLDKIKG---------DLEARIRNFE 785

Query: 385 NILKR 389
             L R
Sbjct: 786 QELLR 800


>BE997611 
          Length = 547

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -2

Query: 379 QFAKFLNILKRICIKIPFGEALSRMPLYTKFLKEIFSKKKAMDHKETIALTRE 431
           +F    +ILK   + +P  E + ++P   KFL+E+      +  +E I+L+ E
Sbjct: 426 KFNALHHILKGYKVNMPITETVEQIPCCIKFLQELLKTNANLSEEEFISLSSE 268


>TC87382 similar to EGAD|146423|156195 vitellogenin {Anolis pulchellus},
           partial (7%)
          Length = 2304

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 13/81 (16%)
 Frame = +2

Query: 8   PTEDPNLHISSFLRLSGTI------KENQEAVRLHLFPFSLRDRASAWFHSLE------- 54
           P  + NL +  FL    TI      KE  E  ++ +    L+  A  W+ +L+       
Sbjct: 629 PDFEGNLQLDDFLDWLQTIERVFEYKEVPEEQKVKIVAAKLKKHALIWWENLKRRRKREG 808

Query: 55  VGSITSWDDMRRAFLARFFPP 75
              I +WD MR+    ++ PP
Sbjct: 809 KSKIKTWDKMRQKLTRKYLPP 871


>TC89913 similar to PIR|H96569|H96569 unknown protein  54928-56750
           [imported] - Arabidopsis thaliana, partial (37%)
          Length = 761

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/88 (23%), Positives = 40/88 (44%), Gaps = 3/88 (3%)
 Frame = +2

Query: 364 KALNPL---RLTKLNLEAQFAKFLNILKRICIKIPFGEALSRMPLYTKFLKEIFSKKKAM 420
           K +NPL      K NL       +++   IC  +PF +  + +PL++       +KK+  
Sbjct: 44  KHINPLINFARKKQNLSLNSLMAMSVASSICTLLPFSKPHNSVPLFSS-----QTKKRCR 208

Query: 421 DHKETIALTRESSAIVKKQPPKLRDPGS 448
               ++   R+++++V K    L D  S
Sbjct: 209 IIISSVTEDRQAASVVSKDKKVLEDSSS 292


>TC85902 similar to SP|Q9XF97|RL4_PRUAR 60S ribosomal protein L4 (L1).
            [Apricot] {Prunus armeniaca}, complete
          Length = 1571

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 25/100 (25%), Positives = 44/100 (44%)
 Frame = +1

Query: 336  ITKAKSVKGESVKLLGEKDAIKTLLDKNKALNPLRLTKLNLEAQFAKFLNILKRICIKIP 395
            + +AK V  +  +++   +    +    K +    L K  L     K LN++ R+    P
Sbjct: 931  LPRAKMVNSDLTRIINSDEVQSVVRPIKKDVKRATLKKNPL-----KNLNVMLRLN---P 1086

Query: 396  FGEALSRMPLYTKFLKEIFSKKKAMDHKETIALTRESSAI 435
            + +   RM L  +  + + SKK+  D K  I    E+SAI
Sbjct: 1087 YAKTAKRMALLAE-AERVKSKKEKFDKKRKIVSKEEASAI 1203


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.317    0.134    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,789,385
Number of Sequences: 36976
Number of extensions: 206599
Number of successful extensions: 1020
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of query: 577
length of database: 9,014,727
effective HSP length: 101
effective length of query: 476
effective length of database: 5,280,151
effective search space: 2513351876
effective search space used: 2513351876
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)