BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146574.12 - phase: 0 /pseudo
(951 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88514 similar to PIR|F86194|F86194 hypothetical protein [impor... 415 e-116
BF643308 similar to GP|14194169|gb At1g05960/T21E18_20 {Arabidop... 344 1e-94
BF639510 similar to GP|14194169|gb At1g05960/T21E18_20 {Arabidop... 279 3e-75
TC91516 similar to PIR|F86194|F86194 hypothetical protein [impor... 217 2e-56
AW690434 similar to PIR|T01764|T017 hypothetical protein A_IG002... 191 9e-49
AW574042 weakly similar to GP|19386699|dbj hypothetical protein~... 87 4e-17
BI271628 weakly similar to PIR|T01764|T017 hypothetical protein ... 51 2e-06
TC82194 similar to PIR|T48601|T48601 hypothetical protein F18O22... 33 0.40
TC90905 similar to PIR|H84432|H84432 probable helicase [imported... 32 0.89
BG587722 30 4.4
TC89383 similar to GP|20259452|gb|AAM13846.1 unknown protein {Ar... 30 4.4
CA921386 30 5.7
TC87656 similar to GP|15809800|gb|AAL06828.1 AT4g16560/dl4305c {... 30 5.7
BF645715 similar to PIR|T05238|T052 hypothetical protein F18A5.8... 30 5.7
TC76512 similar to GP|4959932|gb|AAD34548.1| cystathionine-gamma... 29 7.5
TC81667 similar to GP|8777488|dbj|BAA97068.1 contains similarity... 29 7.5
TC79642 similar to PIR|T07397|T07397 kinesin heavy chain-like pr... 29 7.5
AW692276 similar to GP|11994638|dbj gene_id:MSD21.2~unknown prot... 29 9.8
TC91325 similar to GP|19920124|gb|AAM08556.1 Putative nucleoside... 29 9.8
>TC88514 similar to PIR|F86194|F86194 hypothetical protein [imported] -
Arabidopsis thaliana, partial (14%)
Length = 1551
Score = 415 bits (1066), Expect = e-116
Identities = 257/510 (50%), Positives = 324/510 (63%), Gaps = 43/510 (8%)
Frame = +2
Query: 485 FHQLLLAMAHPDRETQIGAHSILSMVLMPSVVSPWLDQKKI-SKKVESDGLSIQHESLSG 543
FHQLLL MAHPD ET+IGAHS+ S VLMPS+ SP LD K + ++KV S+ LSIQ ES G
Sbjct: 2 FHQLLLVMAHPDHETRIGAHSVFSTVLMPSLFSPQLDHKTMMAEKVPSESLSIQQESFLG 181
Query: 544 EDPLNGKPVEEKPIHHSLISMILVELLCWWAFSNQLVKCCYKQFLTKYWISEIFRI*DLL 603
+ +N KPVE + +S +L + +S K L+ + +S
Sbjct: 182 AEQINRKPVEGGAVVD--VSSRKYRVLPYRVYSFSDALNLGKDELSSFRLS--------- 328
Query: 604 G*AVTK*VSCFLQSGFRQHLLK----MALQIMRQWHTLIALLYYLLVLSYMALVRCFQLA 659
+ VS L S + Q + M ++ L SY+ALVRCFQLA
Sbjct: 329 ----SHQVSLLLSSIWVQATSMDNGPANFEAMAHTFSIALLFTRSKTSSYLALVRCFQLA 496
Query: 660 FSLRSISLDQEGGLPPSRRRSLLTLASHMLIFSARAADFSDLIPKVKASLTEAPVDPFLE 719
FSL SISLDQEGGL PSRRRSL TLAS+MLIFSA+ +FS+LIP VKASL + VDPFLE
Sbjct: 497 FSLMSISLDQEGGLQPSRRRSLFTLASYMLIFSAKTGNFSELIPIVKASLIYSTVDPFLE 676
Query: 720 LVDDNLLRAVCIKSDKVVFGSVEDEVAAMKSLSAVQLDDRQLKETVISYFMTKFSKLPED 779
LVDD L+AV I+S+K+++GS ED+VAA+KSLSAV+LDD++LKETV+SYF+TK+SKLPED
Sbjct: 677 LVDDVRLQAVNIESEKIIYGSQEDDVAAIKSLSAVELDDKKLKETVLSYFLTKYSKLPED 856
Query: 780 ELSSIKNQLLQGFSPDDAYPSGPPLFMETPRPGSPLAQIEFPDVDEM--------KGVGP 831
ELSSIK QL QGFSPDDAYP GP LFMET R SP+AQIE+PD DE+ + GP
Sbjct: 857 ELSSIKKQLAQGFSPDDAYPMGPQLFMETSRTCSPVAQIEYPDFDEIVASAALMDEETGP 1036
Query: 832 ------------------N*VEASQIVEHHFQPTAQM-----------F*VLINSWNRLE 862
+ +Q++E + Q+ + + N L
Sbjct: 1037EPSGNLSDCKQLLSFNNLTILSVNQLLESVLETARQVASFPIPANPVPYDQMKNQCEALV 1216
Query: 863 TGKQQKMLTIRSFKNQQETKAIVLSSENE-EVSRQPVKALEYSKGDLKLVTQEQFQAQDQ 921
+GKQQKM + SFK+QQET+A+VLSS E +VS P+K LEYS+GDLKLV+QEQ Q +
Sbjct: 1217SGKQQKMSVLHSFKHQQETRALVLSSAIETKVSPLPIKTLEYSEGDLKLVSQEQLQTLYE 1396
Query: 922 IRFRSQDTRKQHSLRLPPSSPYDKFLKAAG 951
+ S D R+ HSLRLPP+SPYDKFLKAAG
Sbjct: 1397VPPCSYDYRQHHSLRLPPASPYDKFLKAAG 1486
>BF643308 similar to GP|14194169|gb At1g05960/T21E18_20 {Arabidopsis
thaliana}, partial (23%)
Length = 629
Score = 344 bits (882), Expect = 1e-94
Identities = 171/172 (99%), Positives = 171/172 (99%)
Frame = +2
Query: 1 MGVMSRRVVPACGNLCIFCPSLRARSRQPVKRYKKLIAEILPRNKVAELNDRKIGKLCEY 60
MGVMSRRVVPACGNLCIFCPSLRARSRQPVKRYKKLIAEILPRNKVAELNDRKIGKLCEY
Sbjct: 113 MGVMSRRVVPACGNLCIFCPSLRARSRQPVKRYKKLIAEILPRNKVAELNDRKIGKLCEY 292
Query: 61 ASKNPLRIPKITENLEQRCYKDLRNESFGSVKVILCIYRKLLSSCREQIPLFASSLLGII 120
ASKNPLRIPKITENLEQRCYKDLRNESFGSVKVILCIYRKLLSSCREQIPLFASSLLGII
Sbjct: 293 ASKNPLRIPKITENLEQRCYKDLRNESFGSVKVILCIYRKLLSSCREQIPLFASSLLGII 472
Query: 121 RTLLEQTRADEVRILGCNTLVDFIIFQTDGTYMFNLEGFIPKLCQLAQEVGD 172
RTLLEQTRADEVRILGCNTLVDFIIFQTDGTYMFNLEGF PKLCQLAQEVGD
Sbjct: 473 RTLLEQTRADEVRILGCNTLVDFIIFQTDGTYMFNLEGFYPKLCQLAQEVGD 628
>BF639510 similar to GP|14194169|gb At1g05960/T21E18_20 {Arabidopsis
thaliana}, partial (21%)
Length = 548
Score = 279 bits (714), Expect = 3e-75
Identities = 136/159 (85%), Positives = 146/159 (91%)
Frame = +3
Query: 1 MGVMSRRVVPACGNLCIFCPSLRARSRQPVKRYKKLIAEILPRNKVAELNDRKIGKLCEY 60
MGVMSRRVVPACGNLC CP+LRA SRQPVKRYKKL+AEI PRN+VAE NDRKIGKLC+Y
Sbjct: 63 MGVMSRRVVPACGNLCCVCPALRASSRQPVKRYKKLLAEIFPRNQVAEPNDRKIGKLCDY 242
Query: 61 ASKNPLRIPKITENLEQRCYKDLRNESFGSVKVILCIYRKLLSSCREQIPLFASSLLGII 120
ASKNPLRIPKIT+NLEQ CYKDLRNE FGSV+V+LCIYRKLLSSC+EQ+PLFA SLL II
Sbjct: 243 ASKNPLRIPKITDNLEQTCYKDLRNEVFGSVRVVLCIYRKLLSSCKEQMPLFAGSLLQII 422
Query: 121 RTLLEQTRADEVRILGCNTLVDFIIFQTDGTYMFNLEGF 159
RTLLEQTR DE+RILGCNTL DFI QTDGTYMFNLEGF
Sbjct: 423 RTLLEQTRQDEIRILGCNTLSDFINCQTDGTYMFNLEGF 539
>TC91516 similar to PIR|F86194|F86194 hypothetical protein [imported] -
Arabidopsis thaliana, partial (5%)
Length = 880
Score = 217 bits (552), Expect = 2e-56
Identities = 124/190 (65%), Positives = 135/190 (70%), Gaps = 37/190 (19%)
Frame = +1
Query: 799 PSGPPLFMETPRPGSPLAQIEFPDVDEM--------KGVG------------------PN 832
PSGPPLFMETPRPGS LAQIEFPDVDE+ +G G P+
Sbjct: 1 PSGPPLFMETPRPGSGLAQIEFPDVDEIMAADDLIDEGSGTELSGSQSDRRTSLSTNRPD 180
Query: 833 *VEASQIVEHHFQPTAQMF*V-----------LINSWNRLETGKQQKMLTIRSFKNQQET 881
+ +Q++E + Q+ + + N LETGKQQKMLTIRSFKNQQET
Sbjct: 181 VLGVNQLLESVLETARQVASISTSSTPLPYDQMKNQCEALETGKQQKMLTIRSFKNQQET 360
Query: 882 KAIVLSSENEEVSRQPVKALEYSKGDLKLVTQEQFQAQDQIRFRSQDTRKQHSLRLPPSS 941
KAIVLSSENEEVSRQPVKALEYSKGDLKLVTQEQFQAQDQIRFRSQDTRKQHSLRLPPSS
Sbjct: 361 KAIVLSSENEEVSRQPVKALEYSKGDLKLVTQEQFQAQDQIRFRSQDTRKQHSLRLPPSS 540
Query: 942 PYDKFLKAAG 951
PYDKFLKAAG
Sbjct: 541 PYDKFLKAAG 570
>AW690434 similar to PIR|T01764|T017 hypothetical protein A_IG002P16.24 -
Arabidopsis thaliana, partial (9%)
Length = 644
Score = 191 bits (486), Expect = 9e-49
Identities = 92/189 (48%), Positives = 131/189 (68%)
Frame = +1
Query: 1 MGVMSRRVVPACGNLCIFCPSLRARSRQPVKRYKKLIAEILPRNKVAELNDRKIGKLCEY 60
MGV+SR++ PAC ++C+ CP+LR+RSRQPVKRY+KL+A+I P++ N+RKI KLCEY
Sbjct: 58 MGVISRKIFPACESMCVCCPALRSRSRQPVKRYRKLLADIFPKSPDELPNERKIVKLCEY 237
Query: 61 ASKNPLRIPKITENLEQRCYKDLRNESFGSVKVILCIYRKLLSSCREQIPLFASSLLGII 120
A+KNP RIPKI + LE+RCYK+LR+E VK+I + KLLS C+ QI FA +L +
Sbjct: 238 AAKNPFRIPKIAKYLEERCYKELRSEHIKLVKIIAESFNKLLSICKAQITYFAVDVLNVT 417
Query: 121 RTLLEQTRADEVRILGCNTLVDFIIFQTDGTYMFNLEGFIPKLCQLAQEVGDDERALLLR 180
LL+ ++ + ++ LGC +L FI Q D TY N+E + K+C L+QE G+ L
Sbjct: 418 SELLDYSKDEAIQALGCQSLTRFIYCQVDSTYTHNIEKLVRKVCMLSQEPGETHENRCLX 597
Query: 181 SAGLQTLSS 189
++ LQ LS+
Sbjct: 598 ASSLQCLSA 624
>AW574042 weakly similar to GP|19386699|dbj hypothetical protein~similar to
Arabidopsis thaliana chromosome 1 T21E18.2, partial
(4%)
Length = 649
Score = 86.7 bits (213), Expect = 4e-17
Identities = 44/70 (62%), Positives = 53/70 (74%), Gaps = 1/70 (1%)
Frame = +2
Query: 485 FHQLLLAMAHPDRETQIGAHSILSMVLMPSVVSPWLDQK-KISKKVESDGLSIQHESLSG 543
FHQLLL MAHPD ET+IGAHS+ S VLMPS+ SP LD K +++KV S+ LSIQ ES G
Sbjct: 8 FHQLLLVMAHPDHETRIGAHSVFSTVLMPSLFSPQLDHKTMMAEKVPSESLSIQQESFLG 187
Query: 544 EDPLNGKPVE 553
+ +N KPVE
Sbjct: 188 AEQINRKPVE 217
Score = 68.2 bits (165), Expect = 1e-11
Identities = 44/94 (46%), Positives = 50/94 (52%), Gaps = 10/94 (10%)
Frame = +3
Query: 559 HSLISMILVELLCW----------WAFSNQLVKCCYKQFLTKYWISEIFRI*DLLG*AVT 608
H LI + ++ W W L Y Q L Y FR * L G*A T
Sbjct: 378 HLLIFGCITNIIKWFSLFGFFPL*WGLQIFLFAVIYTQILNDY----SFRS*VLFG*AAT 545
Query: 609 K*VSCFLQSGFRQHLLKMALQIMRQWHTLIALLY 642
K*VSCFLQSGFRQHL MA +I+R W TL+ALLY
Sbjct: 546 K*VSCFLQSGFRQHLWTMARRILRLWLTLLALLY 647
>BI271628 weakly similar to PIR|T01764|T017 hypothetical protein
A_IG002P16.24 - Arabidopsis thaliana, partial (7%)
Length = 487
Score = 50.8 bits (120), Expect = 2e-06
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Frame = +3
Query: 635 HTLIALLYYLLVLSYM----ALVRCFQLAFSLRSISLDQEGG-LPPSRRRSLLTLASHML 689
H+ I +L L + + ++R FQL SL ++ LD G LPP+ +RS+ L+ ML
Sbjct: 177 HSFILVLIVLRIKNLKDRDNLVIRFFQLPLSLWTMLLDPSNGTLPPACQRSIFVLSVGML 356
Query: 690 IFSARAADFSDLIPKVKASLTEAPVDPFLELVDDNLLRA 728
+F+ + DL V L ++ VDPFL + DDN + A
Sbjct: 357 VFACKIYQIHDL-NDVLTLLAKSEVDPFLGISDDNQVYA 470
>TC82194 similar to PIR|T48601|T48601 hypothetical protein F18O22.70 -
Arabidopsis thaliana, partial (10%)
Length = 858
Score = 33.5 bits (75), Expect = 0.40
Identities = 28/89 (31%), Positives = 43/89 (47%), Gaps = 4/89 (4%)
Frame = -2
Query: 855 INSWNRLETGKQQKMLTIRSFKNQQETKAIVLSSENEE---VSRQPVKALEYSKGDLKLV 911
IN +N TGK+ MLTI +K + + KA ++ S N +S Y+ L +
Sbjct: 773 INGYN--STGKKLSMLTINGYKYKIKNKAYLIFSSNFAPVLLSLMSSTQRVYTHKILTPI 600
Query: 912 TQEQFQAQD-QIRFRSQDTRKQHSLRLPP 939
++ AQ+ QI ++ RK H R PP
Sbjct: 599 AEKTTTAQETQIHVGTRPIRKAHWHRKPP 513
>TC90905 similar to PIR|H84432|H84432 probable helicase [imported] -
Arabidopsis thaliana, partial (20%)
Length = 904
Score = 32.3 bits (72), Expect = 0.89
Identities = 14/51 (27%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -1
Query: 20 PSLRARSRQPVKRYKKLIAEILPRNKVAELNDR--KIGKLCEYASKNPLRI 68
P + RSR K + +++ +++ ++++ + +R K +C+Y S NPL I
Sbjct: 898 PVFQNRSRANYKMWTRIVVQVIQQSQICDCLNRFAKAHLICQYGSSNPLPI 746
>BG587722
Length = 556
Score = 30.0 bits (66), Expect = 4.4
Identities = 22/63 (34%), Positives = 30/63 (46%)
Frame = -2
Query: 723 DNLLRAVCIKSDKVVFGSVEDEVAAMKSLSAVQLDDRQLKETVISYFMTKFSKLPEDELS 782
D L V D V GS+EDEVA + SLS + + E F+ FS L + +
Sbjct: 363 DGFLLNVHSLEDVVASGSLEDEVA*VSSLSCECMLFMKAIEFCCGSFIASFSLLSAKQYA 184
Query: 783 SIK 785
S+K
Sbjct: 183 SMK 175
>TC89383 similar to GP|20259452|gb|AAM13846.1 unknown protein {Arabidopsis
thaliana}, partial (26%)
Length = 1372
Score = 30.0 bits (66), Expect = 4.4
Identities = 31/174 (17%), Positives = 71/174 (39%), Gaps = 19/174 (10%)
Frame = +3
Query: 294 RVLEPLFHYFDTENHWSSEKGVAYCVLMYLQFLLAESGNNSHLMLSILVKHLDHKNVAKQ 353
+V++ F + D +H ++ ++ + G ++ + + +D K V +Q
Sbjct: 738 KVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQ 917
Query: 354 PI-LQIDIINITTQVAQNV--------KQQASVAVIGAISDLIKHLRRCLQNSAEATDIG 404
P +++++ T V + +Q++ A + I IK + N+ A +IG
Sbjct: 918 PCSTTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAIKSFNKHAMNAEGAANIG 1097
Query: 405 ----------NDAHTLNTKLQSSIEMCILQLSNKVGDAGPIFDLMAVVLENVSS 448
H NTKL+ + CI+ + N + ++++ +E +S
Sbjct: 1098ILKLWLAKLTPLVHDKNTKLKEAAITCIISVYNHFDSTAVLNFILSLSVEEQNS 1259
>CA921386
Length = 695
Score = 29.6 bits (65), Expect = 5.7
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +2
Query: 622 HLLKMALQIMRQWHTLIALLYY--LLVLSYMALVRCFQLAFSLRSISLDQE 670
H+LK+ ++ + ++L Y LLVLSY L L FS R +SL+QE
Sbjct: 458 HILKIFIK*FNLF*QFLSLRSYEELLVLSYFWLD*AINLPFSSRLLSLEQE 610
>TC87656 similar to GP|15809800|gb|AAL06828.1 AT4g16560/dl4305c {Arabidopsis
thaliana}, partial (69%)
Length = 1884
Score = 29.6 bits (65), Expect = 5.7
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 862 ETGKQQKMLTIRSFKNQQETKAIVLSSENEEVSRQPVKALEYSKGDLKLVTQEQFQAQDQ 921
ET + + F+ Q IVL S ++ ++ + +SKG +K VT E Q+Q
Sbjct: 1045 ETENLLSLSILPCFQTQSILITIVLDSPEYQLGKERYRRRRFSKGSMKKVTVEWLLIQEQ 1224
>BF645715 similar to PIR|T05238|T052 hypothetical protein F18A5.80 -
Arabidopsis thaliana, partial (22%)
Length = 667
Score = 29.6 bits (65), Expect = 5.7
Identities = 31/102 (30%), Positives = 43/102 (41%), Gaps = 5/102 (4%)
Frame = -1
Query: 184 LQTLSSMVKFMGEHSHLSMDFDKIISAILENYVDLQSKSNLAKVEKLNSQSQ-NQLVQEF 242
LQ L + G H +L MDF S ILE+++ L S ++ +E N Q F
Sbjct: 496 LQELPHAFEQFGSHVYLQMDFS--FSLILEHHLPLNSLTHQHPLE*QNRFFHLLQYA*TF 323
Query: 243 PKEEAHV----SSMLNVATGFEIESKLDTAKNPAYWSKVCLY 280
PK H+ S+L F+ L NP KV +Y
Sbjct: 322 PKSPYHLWLHPFSLLQFV*HFQ-PHPLSVPSNPEEMQKVWIY 200
>TC76512 similar to GP|4959932|gb|AAD34548.1| cystathionine-gamma-synthase
precursor {Glycine max}, partial (90%)
Length = 2103
Score = 29.3 bits (64), Expect = 7.5
Identities = 13/30 (43%), Positives = 18/30 (59%)
Frame = +3
Query: 704 KVKASLTEAPVDPFLELVDDNLLRAVCIKS 733
KV TE+P +PFL VD L+ +C K+
Sbjct: 930 KVSLFFTESPTNPFLRCVDIKLVSELCHKN 1019
>TC81667 similar to GP|8777488|dbj|BAA97068.1 contains similarity to SF16
protein~gene_id:K15M2.19 {Arabidopsis thaliana}, partial
(34%)
Length = 1216
Score = 29.3 bits (64), Expect = 7.5
Identities = 12/35 (34%), Positives = 21/35 (59%), Gaps = 2/35 (5%)
Frame = -3
Query: 552 VEEKPIHHSLISMILVELLCWWAFSNQLVK--CCY 584
+ +P+HHS S +++ + WAF + L+ CCY
Sbjct: 563 IVSEPLHHSNSSSLILASIFNWAFQSLLLNPGCCY 459
>TC79642 similar to PIR|T07397|T07397 kinesin heavy chain-like protein (clone
PKCBP) - potato, partial (42%)
Length = 2321
Score = 29.3 bits (64), Expect = 7.5
Identities = 33/140 (23%), Positives = 65/140 (45%), Gaps = 17/140 (12%)
Frame = +3
Query: 329 ESGNNSHLMLSILVK--HLDHKNVAKQPILQIDI-----INITTQVAQNVKQQASV-AVI 380
E + SHL+LSI+V+ +L ++VA+ + +D+ + + + +K+ S+ +
Sbjct: 1545 EESSRSHLILSIVVESTNLQSQSVARGKLSFVDLAGSERVKKSGSMGSQLKEAQSINKSL 1724
Query: 381 GAISDLIKHLRRCLQNS---------AEATDIGNDAHTLNTKLQSSIEMCILQLSNKVGD 431
A+ D+I L Q++ + +G +A TL S IE + + N +
Sbjct: 1725 SALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLMY 1904
Query: 432 AGPIFDLMAVVLENVSSSTI 451
A + ++ +NVSS I
Sbjct: 1905 ASRVRSIVNDPSKNVSSKEI 1964
>AW692276 similar to GP|11994638|dbj gene_id:MSD21.2~unknown protein
{Arabidopsis thaliana}, partial (18%)
Length = 652
Score = 28.9 bits (63), Expect = 9.8
Identities = 13/29 (44%), Positives = 17/29 (57%)
Frame = -3
Query: 335 HLMLSILVKHLDHKNVAKQPILQIDIINI 363
H SI++ H+N AK P LQI +NI
Sbjct: 617 HYTSSIVINQHGHRNQAKSPFLQICALNI 531
>TC91325 similar to GP|19920124|gb|AAM08556.1 Putative nucleoside
phosphatase {Oryza sativa} [Oryza sativa (japonica
cultivar-group)], partial (2%)
Length = 672
Score = 28.9 bits (63), Expect = 9.8
Identities = 15/40 (37%), Positives = 20/40 (49%), Gaps = 7/40 (17%)
Frame = +2
Query: 267 TAKNPAYWSKVCLYN-------IAKLAKEATTVRRVLEPL 299
T KN + W C Y+ + KL ++ VRR LEPL
Sbjct: 542 TKKNNSLWKNSCQYHCMQTEPGLDKLVNDSLRVRRALEPL 661
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.323 0.137 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,953,588
Number of Sequences: 36976
Number of extensions: 383638
Number of successful extensions: 2918
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2118
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 685
Number of HSP's gapped (non-prelim): 2337
length of query: 951
length of database: 9,014,727
effective HSP length: 105
effective length of query: 846
effective length of database: 5,132,247
effective search space: 4341880962
effective search space used: 4341880962
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 63 (28.9 bits)
Medicago: description of AC146574.12