BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146573.2 - phase: 0
(226 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BG586655 similar to GP|23495458|db dehydratiion responsive eleme... 405 e-124
TC91020 similar to GP|23495458|dbj|BAC20183. dehydratiion respon... 239 5e-64
TC80792 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly e... 202 8e-53
TC79347 similar to GP|18535580|gb|AAK57551.1 putative transcript... 178 1e-45
TC82026 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly e... 173 4e-44
TC89715 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly e... 172 7e-44
TC80802 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly e... 172 9e-44
TC91449 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly e... 167 4e-42
BF520341 similar to GP|23318573|gb Sequence 89 from patent US 64... 164 3e-41
AW694968 similar to PIR|T48518|T485 transcription factor like pr... 104 2e-23
AW689511 similar to GP|14140155|emb putative AP2 domain transcri... 101 3e-22
AL366881 similar to PIR|T00399|T003 probable AP2 domain transcri... 100 3e-22
TC90918 similar to GP|18873847|gb|AAL79793.1 putative DNA bindin... 98 2e-21
TC79624 similar to PIR|G86142|G86142 protein Similar to transcri... 97 5e-21
AW694919 similar to GP|21554403|gb transcription factor TINY pu... 91 3e-19
TC87850 similar to GP|21554339|gb|AAM63446.1 unknown {Arabidopsi... 83 7e-17
TC79073 similar to GP|18149209|dbj|BAB83615. AP2 domain containi... 76 9e-15
TC87781 weakly similar to GP|21554403|gb|AAM63508.1 transcriptio... 76 1e-14
TC82184 homologue to PIR|D96507|D96507 hypothetical protein T12C... 75 3e-14
CA919708 similar to GP|23318573|gb| Sequence 89 from patent US 6... 72 2e-13
>BG586655 similar to GP|23495458|db dehydratiion responsive element binding
protein 1 like protein {Prunus avium}, partial (46%)
Length = 835
Score = 405 bits (1042), Expect(2) = e-124
Identities = 202/202 (100%), Positives = 202/202 (100%)
Frame = +2
Query: 1 MNIFLSSFGDYSDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKW 60
MNIFLSSFGDYSDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKW
Sbjct: 23 MNIFLSSFGDYSDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKW 202
Query: 61 VCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLP 120
VCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLP
Sbjct: 203 VCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLP 382
Query: 121 ESNDAVEIRRAAMEAAKMFAIEENHNQRSDRDAVDMNMENSKKNVLEVQVPVLSSEFEDM 180
ESNDAVEIRRAAMEAAKMFAIEENHNQRSDRDAVDMNMENSKKNVLEVQVPVLSSEFEDM
Sbjct: 383 ESNDAVEIRRAAMEAAKMFAIEENHNQRSDRDAVDMNMENSKKNVLEVQVPVLSSEFEDM 562
Query: 181 HHNLLLSIANEPLRSNPPSPTN 202
HHNLLLSIANEPLRSNPPSPTN
Sbjct: 563 HHNLLLSIANEPLRSNPPSPTN 628
Score = 55.5 bits (132), Expect(2) = e-124
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 203 YYGSNYDDMEIFDTQIVSLWNFSI 226
YYGSNYDDMEIFDTQIVSLWNFSI
Sbjct: 630 YYGSNYDDMEIFDTQIVSLWNFSI 701
>TC91020 similar to GP|23495458|dbj|BAC20183. dehydratiion responsive
element binding protein 1 like protein {Prunus avium},
partial (46%)
Length = 435
Score = 239 bits (611), Expect = 5e-64
Identities = 120/139 (86%), Positives = 126/139 (90%), Gaps = 5/139 (3%)
Frame = +3
Query: 10 DYSDSSSS-----SETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEM 64
DYSD+SSS + TSSSEVILA ARPKKRAGRRVFKETRHPVYRGVRRR NNKWVCEM
Sbjct: 6 DYSDTSSSETASSNRTSSSEVILAPARPKKRAGRRVFKETRHPVYRGVRRRKNNKWVCEM 185
Query: 65 RVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESND 124
RVPN NKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRL LPESND
Sbjct: 186 RVPNNIANKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLRLPESND 365
Query: 125 AVEIRRAAMEAAKMFAIEE 143
A EIRRAAMEAA++FA+E+
Sbjct: 366 ATEIRRAAMEAAQLFAVED 422
>TC80792 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly elicited
protein 111B {Nicotiana tabacum}, partial (51%)
Length = 752
Score = 202 bits (514), Expect = 8e-53
Identities = 117/203 (57%), Positives = 143/203 (69%), Gaps = 10/203 (4%)
Frame = +3
Query: 13 DSSSSSE--TSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNN--KWVCEMRVPN 68
D SS E +SSSE++LAS +PKKRAGRR FKETRHPVYRGVRRRNNN KWVCE+RVPN
Sbjct: 78 DESSYVENNSSSSEILLASEQPKKRAGRRKFKETRHPVYRGVRRRNNNNNKWVCEVRVPN 257
Query: 69 INVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEI 128
+ +RIWLGTYPTPEMAARAHDVAAL L+GKSACLNFADSAWRL LP +N+A EI
Sbjct: 258 -----DKSTRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLALPATNNAKEI 422
Query: 129 RRAAMEAAKMFAIEENHNQRSDRDAVDMN------MENSKKNVLEVQVPVLSSEFEDMHH 182
R+ A EAA FA+ + +++ D+N ++N L V+VP E+M H
Sbjct: 423 RKMAAEAALAFAVVADSKEQTMISNCDVNSVGVMEVDNKPLQGLCVEVPE-----EEMLH 587
Query: 183 NLLLSIANEPLRSNPPSPTNYYG 205
+ S+A+EPLRS P +P +G
Sbjct: 588 DWFRSMADEPLRS-PITPFIRHG 653
>TC79347 similar to GP|18535580|gb|AAK57551.1 putative transcriptional
activator CBF1 {Lycopersicon esculentum}, partial (58%)
Length = 832
Score = 178 bits (452), Expect = 1e-45
Identities = 106/233 (45%), Positives = 142/233 (60%), Gaps = 9/233 (3%)
Frame = +1
Query: 1 MNIFLSSFGDYSDSSSSSETSS-------SEVILASARPKKRAGRRVFKETRHPVYRGVR 53
+++F ++ YS S SS +SS SE+ LA++ PKKRAGR++FKETRHPVYRGVR
Sbjct: 25 IHMFTTNNSSYSHSISSEASSSYYNSLPESEIRLAASNPKKRAGRKIFKETRHPVYRGVR 204
Query: 54 RRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADS 113
+RN +KWVCEMR PN K+RIWLGT+PT EMAARAHDVAA+ L+G+ ACLNFADS
Sbjct: 205 KRNLDKWVCEMREPN------TKTRIWLGTFPTAEMAARAHDVAAMALRGRYACLNFADS 366
Query: 114 AWRLTLPESNDAVEIRRAAMEAAKMFAIEENHNQRSDRDAVDMNMENSKKNVLEVQVPVL 173
WRL +P ++ +I++AA +AA+ F R D + N+E V ++ +
Sbjct: 367 VWRLPIPATSSIKDIQKAATKAAEAF--------RPDNTIMITNIETVVAVVATKELNMF 522
Query: 174 SSEFEDMHHNLLLSIANEPLRSNPPSPTNYYGSNYDDMEIFDTQ--IVSLWNF 224
E E+ N+ N L S P+ + Y Y+D D Q VSLWNF
Sbjct: 523 CVEEEEEMLNMPEFWRNMALMS--PTHSFEYHDQYEDFHFQDFQDDEVSLWNF 675
>TC82026 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly elicited
protein 111B {Nicotiana tabacum}, partial (51%)
Length = 596
Score = 173 bits (439), Expect = 4e-44
Identities = 103/207 (49%), Positives = 133/207 (63%), Gaps = 7/207 (3%)
Frame = +3
Query: 23 SEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLG 82
SEV LAS+ PKKRAGR++FKETRHPVYRGVR+RN NKWVCEMR PN K+RIWLG
Sbjct: 15 SEVRLASSNPKKRAGRKIFKETRHPVYRGVRKRNLNKWVCEMREPN------TKNRIWLG 176
Query: 83 TYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRAAMEAAKMFAIE 142
T+PT EMAARAHDVAA+ L+G+ ACLNFADS WRL +P ++ +I++AA +AA+ F
Sbjct: 177 TFPTAEMAARAHDVAAIALRGRYACLNFADSVWRLPIPATSAIKDIQKAATKAAEAFR-P 353
Query: 143 ENHNQRSDRDAVDMNMENSKKNVLEVQV---PVLSSEFEDMHHNLLLSIANEPLRSNPPS 199
+N SD D V + + N+ V+V VL+ ++ N+ L S
Sbjct: 354 DNTLMTSDIDTVVAVVATQELNMFRVEVEEEEVLN--MPELWRNMALM-----------S 494
Query: 200 PTNYYG--SNYDDMEIFDTQ--IVSLW 222
PT+ +G Y+D+ I D Q VSLW
Sbjct: 495 PTHSFGYHDQYEDIHIQDFQDDEVSLW 575
>TC89715 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly elicited
protein 111B {Nicotiana tabacum}, partial (49%)
Length = 947
Score = 172 bits (437), Expect = 7e-44
Identities = 105/229 (45%), Positives = 142/229 (61%), Gaps = 5/229 (2%)
Frame = +3
Query: 2 NIF-LSSFGDYSDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKW 60
N+F ++ F + D SSS SE LA PKKRAGR+ F+ETRHPVYRGVR+R++ KW
Sbjct: 3 NMFTMNQFSESHDPCSSS----SERFLAETMPKKRAGRKKFRETRHPVYRGVRKRDSGKW 170
Query: 61 VCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLP 120
VCE+R PN K+RIWLGT+PTPEMAARAHDVAA+ L+G+SACLNFADSAW+L +P
Sbjct: 171 VCEVREPN------KKTRIWLGTFPTPEMAARAHDVAAIALRGRSACLNFADSAWKLPVP 332
Query: 121 ESNDAVEIRRAAMEAAKMF---AIEENHNQRSDRDAVDMNMENSKKNVLEVQVPVLSSEF 177
+++A +I++AA EAA+ F ++ EN +R D E S + V E
Sbjct: 333 ATSEARDIQKAAAEAAEAFRPESVFENSEERKD-------SEPSSTVAVSETVMEQREEE 491
Query: 178 EDMHHNLLLSIANEPLRSNPPSPTNYYGSNYDDMEI-FDTQIVSLWNFS 225
ED L ++ SP +Y+GS+ ++ FD VSL ++S
Sbjct: 492 EDTVPEYLRNMV-------LMSPAHYWGSDCGVADVEFDETEVSLGSYS 617
>TC80802 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly elicited
protein 111B {Nicotiana tabacum}, partial (51%)
Length = 791
Score = 172 bits (436), Expect = 9e-44
Identities = 103/217 (47%), Positives = 131/217 (59%), Gaps = 4/217 (1%)
Frame = +3
Query: 12 SDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINV 71
S+ S + E+ LA+ PKKRAGR+ FKETRHPVYRGVR+RN +KWVCEMR PN
Sbjct: 153 SEGSHWMSICNEEMRLAATTPKKRAGRKKFKETRHPVYRGVRKRNLDKWVCEMREPN--- 323
Query: 72 NKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRA 131
K++IWLGT+PT EMAARAHDVAA+ L+G+ ACLNFADSAWRL P + A +I++A
Sbjct: 324 ---KKTKIWLGTFPTAEMAARAHDVAAMALRGRYACLNFADSAWRLPKPATTQAKDIQKA 494
Query: 132 AMEAAKMFAIEE----NHNQRSDRDAVDMNMENSKKNVLEVQVPVLSSEFEDMHHNLLLS 187
A EAA+ F ++ NHN +D D N E Q + E E+ N+
Sbjct: 495 ATEAAEAFRPDKTLLTNHND-NDNDNDKENDMAVVATATEEQSMICMEEKEEGVMNMQEM 671
Query: 188 IANEPLRSNPPSPTNYYGSNYDDMEIFDTQIVSLWNF 224
+N L S P YY Y + E F + VSLW+F
Sbjct: 672 WSNMALMS-PTHSLGYYEYQYIN-EDFQDEEVSLWSF 776
>TC91449 similar to GP|12003384|gb|AAG43549.1 Avr9/Cf-9 rapidly elicited
protein 111B {Nicotiana tabacum}, partial (50%)
Length = 812
Score = 167 bits (422), Expect = 4e-42
Identities = 91/195 (46%), Positives = 123/195 (62%)
Frame = +3
Query: 23 SEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLG 82
SEV LAS+ PKKRAGR++FKETRHPVYRGVR+RN NKWVCEMR PN K+RIWLG
Sbjct: 15 SEVRLASSNPKKRAGRKIFKETRHPVYRGVRKRNLNKWVCEMREPN------TKNRIWLG 176
Query: 83 TYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRAAMEAAKMFAIE 142
T+PTPEMAARAHDVAA+ L+G+ ACLNF+DS WRL +P ++ +I++AA +AA+ F
Sbjct: 177 TFPTPEMAARAHDVAAMALRGRYACLNFSDSVWRLPIPATSAIKDIQKAATKAAEAF--- 347
Query: 143 ENHNQRSDRDAVDMNMENSKKNVLEVQVPVLSSEFEDMHHNLLLSIANEPLRSNPPSPTN 202
R D + N++ V ++ + E ++ L + + P+ +
Sbjct: 348 -----RPDNTLMTNNIDTIVDVVATKELNMFCVEVDEQEEMLNMPELWRNMALMSPTHSF 512
Query: 203 YYGSNYDDMEIFDTQ 217
Y YDD+ + D Q
Sbjct: 513 EY-HEYDDIHVQDFQ 554
>BF520341 similar to GP|23318573|gb Sequence 89 from patent US 6417428,
partial (68%)
Length = 645
Score = 164 bits (414), Expect = 3e-41
Identities = 82/134 (61%), Positives = 102/134 (75%)
Frame = +2
Query: 6 SSFGDYSDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMR 65
SSF + S+ S S+ EV LA+ PKKRAGR+ FKETRHPVYRGVR+RN +KWVCEMR
Sbjct: 77 SSFPN-SEGSQGMSISNEEVRLAATTPKKRAGRKKFKETRHPVYRGVRKRNLDKWVCEMR 253
Query: 66 VPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDA 125
PN K++IWLGT+PT EMAARAHDVAA+ L+G+ ACLNFADSAWRL +P + A
Sbjct: 254 EPN------KKTKIWLGTFPTAEMAARAHDVAAMALRGRYACLNFADSAWRLPIPATTQA 415
Query: 126 VEIRRAAMEAAKMF 139
+I++AA +AA+ F
Sbjct: 416 KDIQKAAAQAAEAF 457
>AW694968 similar to PIR|T48518|T485 transcription factor like protein -
Arabidopsis thaliana, partial (37%)
Length = 590
Score = 104 bits (260), Expect = 2e-23
Identities = 58/121 (47%), Positives = 77/121 (62%)
Frame = +2
Query: 16 SSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKNN 75
++SET SS P+ + + + ++HPVYRGVR RN KWV E+R P
Sbjct: 65 NNSETKSSSNSPPPPSPQSQQIKGIRDTSKHPVYRGVRMRNWGKWVSEIREPK------K 226
Query: 76 KSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRAAMEA 135
KSRIWLGT+PTPEMAARAHDVAAL++KG +A LNF + A L P S +++ AA +A
Sbjct: 227 KSRIWLGTFPTPEMAARAHDVAALSIKGSAAILNFPELANLLPRPASLAPRDVQAAANKA 406
Query: 136 A 136
+
Sbjct: 407 S 409
>AW689511 similar to GP|14140155|emb putative AP2 domain transcription factor
{Oryza sativa}, partial (32%)
Length = 703
Score = 101 bits (251), Expect = 3e-22
Identities = 61/128 (47%), Positives = 75/128 (57%), Gaps = 1/128 (0%)
Frame = +1
Query: 12 SDSSSSSETSSSEVILASARPKK-RAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNIN 70
S SS S + S + RPK+ R +HP Y GVR+RN KWV E+R P
Sbjct: 163 STSSQESPPTHSIQKQSPTRPKRPRDDDNNDNNNKHPTYHGVRKRNWGKWVSEIREPR-- 336
Query: 71 VNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRR 130
KSRIWLGT+ TPEMAARAHDVAALT+KGK+A LNF + L P ++ +I+
Sbjct: 337 ----KKSRIWLGTFSTPEMAARAHDVAALTIKGKTAILNFPHLSNMLPRPATSAPRDIQA 504
Query: 131 AAMEAAKM 138
AA AA M
Sbjct: 505 AATAAAAM 528
>AL366881 similar to PIR|T00399|T003 probable AP2 domain transcription factor
[imported] - Arabidopsis thaliana, partial (26%)
Length = 477
Score = 100 bits (250), Expect = 3e-22
Identities = 60/133 (45%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Frame = +1
Query: 2 NIFLSSFGDYSDSSSSSETSSSEVILAS------ARPKKRAGRRVFKETRHPVYRGVRRR 55
N F +S SS+S+ S+S L + K + R +T+HP YRGVR R
Sbjct: 97 NFFSTSSSSTPTSSNSNSNSNSSTNLETKNNPQNGNKKSKKRERNENDTKHPTYRGVRMR 276
Query: 56 NNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAW 115
KWV E+R P KSRIWLGTYPT EMAARAHDVAAL +KG SA LNF + A
Sbjct: 277 AWGKWVSEIREPR------KKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPNLAQ 438
Query: 116 RLTLPESNDAVEI 128
L P + +I
Sbjct: 439 NLPRPSTTSPKDI 477
>TC90918 similar to GP|18873847|gb|AAL79793.1 putative DNA binding protein
{Oryza sativa}, partial (29%)
Length = 512
Score = 98.2 bits (243), Expect = 2e-21
Identities = 62/131 (47%), Positives = 76/131 (57%), Gaps = 6/131 (4%)
Frame = +1
Query: 12 SDSSSSSETSSSEVILASAR----PKKRAG--RRVFKETRHPVYRGVRRRNNNKWVCEMR 65
S+SSSS E E + + KK+ G +V +P YRGVR R KWV E+R
Sbjct: 136 SNSSSSLEEEEEEEEATNTKCKEKKKKKVGMVNKVNDRKNNPTYRGVRMRQWGKWVSEIR 315
Query: 66 VPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDA 125
P KSRIWLGT+PTP+MAARAHDVAALT+KG SA LNF + A L S
Sbjct: 316 EPR------KKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAVLPRAASASP 477
Query: 126 VEIRRAAMEAA 136
+I+ AA +AA
Sbjct: 478 KDIQVAAAKAA 510
>TC79624 similar to PIR|G86142|G86142 protein Similar to transcription
factor TINY [imported] - Arabidopsis thaliana, partial
(58%)
Length = 679
Score = 97.1 bits (240), Expect = 5e-21
Identities = 51/93 (54%), Positives = 62/93 (65%)
Frame = +3
Query: 44 TRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKG 103
TRHPVYRGVR+R KWV E+R P KSRIWLG++P PEMAA+A+DVA LKG
Sbjct: 102 TRHPVYRGVRKRRWGKWVSEIREPK------KKSRIWLGSFPVPEMAAKAYDVAVYCLKG 263
Query: 104 KSACLNFADSAWRLTLPESNDAVEIRRAAMEAA 136
+ A LNF D L LP + A +I+ AA +AA
Sbjct: 264 QKAQLNFPDEVENLPLPATCTARDIQAAAAKAA 362
>AW694919 similar to GP|21554403|gb transcription factor TINY putative
{Arabidopsis thaliana}, partial (53%)
Length = 570
Score = 91.3 bits (225), Expect = 3e-19
Identities = 51/98 (52%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Frame = +2
Query: 44 TRHPVYRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKG 103
TRHPV+ GVR+R KWV E+R P KSRIWLG++P PEMAA+A+DVAA LKG
Sbjct: 5 TRHPVFHGVRKRRWGKWVSEIREPR------KKSRIWLGSFPAPEMAAKAYDVAAYCLKG 166
Query: 104 KSACLNFADSAWRLTL---PESNDAVEIRRAAMEAAKM 138
A LNF D RL + P A +I+ AA +AA+M
Sbjct: 167 CKAQLNFPDEVHRLPVLPPPSLCTARDIQAAAAKAARM 280
>TC87850 similar to GP|21554339|gb|AAM63446.1 unknown {Arabidopsis
thaliana}, partial (37%)
Length = 1087
Score = 83.2 bits (204), Expect = 7e-17
Identities = 60/182 (32%), Positives = 88/182 (47%), Gaps = 5/182 (2%)
Frame = +2
Query: 49 YRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACL 108
YRG R R+ KWV E+R P RIWLGTYPT EMAA A+DVAAL LKG L
Sbjct: 335 YRGTRCRSG-KWVSEIREPR------KTKRIWLGTYPTAEMAAAAYDVAALALKGPDTTL 493
Query: 109 NFADSAWRLTLPESNDAVEIRRAAMEAA--KMFAIEENHNQRSDRDAVDMNMENSKKNVL 166
NF +S +P S + +IR AA AA ++ + Q+ + A +S +L
Sbjct: 494 NFPNSILSYPIPASLSSTDIRAAAEAAAQTRIMRPAQQDQQQQNPSAFSFEGSSSSSGIL 673
Query: 167 EVQV---PVLSSEFEDMHHNLLLSIANEPLRSNPPSPTNYYGSNYDDMEIFDTQIVSLWN 223
+ Q E E ++ LL ++ +PP +++ + DD +LW+
Sbjct: 674 QQQQGHHHEYIDEDELLNMPSLLDDMARGMQVSPPRMSSFSNCSSDDSPRNSDGRDNLWS 853
Query: 224 FS 225
++
Sbjct: 854 YN 859
>TC79073 similar to GP|18149209|dbj|BAB83615. AP2 domain containing protein
{Arabidopsis thaliana}, partial (57%)
Length = 1085
Score = 76.3 bits (186), Expect = 9e-15
Identities = 56/166 (33%), Positives = 82/166 (48%), Gaps = 17/166 (10%)
Frame = +1
Query: 15 SSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEMRVPNINVNKN 74
S +S T++S + + G + K+ P YRG+R R KWV E+R PN
Sbjct: 217 SMNSRTTNSPIAIDHKNNNNNKGMKKEKKAMKP-YRGIRMRKWGKWVAEIREPN------ 375
Query: 75 NKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPE----------SND 124
+SRIWLG+Y TP AARA+D A L+G SA LNF + ++ + S D
Sbjct: 376 KRSRIWLGSYITPIAAARAYDTAVFYLRGPSANLNFPELLFKDQQEDEENLQQHGNMSAD 555
Query: 125 AVEIRRAAMEAAKMFAIEEN-------HNQRSDRDAVDMNMENSKK 163
++ ++AA A++ AIE N H+ S + V N +S K
Sbjct: 556 SIR-KKAAQVGARVDAIETNSLINHHHHHHVSSNNHVHSNSTSSLK 690
>TC87781 weakly similar to GP|21554403|gb|AAM63508.1 transcription factor
TINY putative {Arabidopsis thaliana}, partial (44%)
Length = 884
Score = 75.9 bits (185), Expect = 1e-14
Identities = 52/147 (35%), Positives = 78/147 (52%)
Frame = +2
Query: 4 FLSSFGDYSDSSSSSETSSSEVILASARPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCE 63
FL S S+S S +E + KR+ R+ V+ GVR+R+ ++V E
Sbjct: 89 FLMSITKESESQSQAEARPGSIT-------KRSSRK-----GDSVFHGVRKRSWGRYVSE 232
Query: 64 MRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESN 123
+R+P K+RIWLG++ + EMAARA+D AA LKG SA LNF + L P S+
Sbjct: 233 IRLPG------QKTRIWLGSFESAEMAARAYDSAAFFLKGNSASLNFPEEVEFLPRPLSS 394
Query: 124 DAVEIRRAAMEAAKMFAIEENHNQRSD 150
+I+ AA +AA +H+Q+ +
Sbjct: 395 SRRDIQSAASKAAHQ---RSHHHQQQE 466
>TC82184 homologue to PIR|D96507|D96507 hypothetical protein T12C22.10
[imported] - Arabidopsis thaliana, partial (37%)
Length = 723
Score = 74.7 bits (182), Expect = 3e-14
Identities = 55/167 (32%), Positives = 77/167 (45%), Gaps = 10/167 (5%)
Frame = +1
Query: 49 YRGVRRRNNNKWVCEMRVPNINVNKNNKSRIWLGTYPTPEMAARAHDVAALTLKGKSAC- 107
Y+GVR R+ WV E+R PN K+RIWLG+Y T E AARA+D A L LKG S+
Sbjct: 109 YKGVRMRSWGSWVSEIRAPN------QKTRIWLGSYSTAEAAARAYDAALLCLKGSSSAS 270
Query: 108 -LNF--ADSAWRLTLPESNDAVEIRRAAMEAAKMFA------IEENHNQRSDRDAVDMNM 158
LNF S+ +P+ I+R A AA F + N N ++ + +
Sbjct: 271 NLNFPLTSSSSHYNIPQDMSPKSIQRVAAAAANSFIDNNNNNVNVNVNDNANTPSSSSLV 450
Query: 159 ENSKKNVLEVQVPVLSSEFEDMHHNLLLSIANEPLRSNPPSPTNYYG 205
+ V V L S F+ ++ + I S TN+YG
Sbjct: 451 SSPSSMVSSDDVSSLMSSFDQVNDESMAMI----------SETNWYG 561
>CA919708 similar to GP|23318573|gb| Sequence 89 from patent US 6417428,
partial (35%)
Length = 751
Score = 72.0 bits (175), Expect = 2e-13
Identities = 51/138 (36%), Positives = 74/138 (52%), Gaps = 5/138 (3%)
Frame = -3
Query: 85 PTPEMAARAHDVAALTLKGKSACLNFADSAWRLTLPESNDAVEIRRAAMEAAKMFAIEEN 144
PT EM RAHDVAA+ G+ ACLNFADS WRL +P ++ +I++AA +AA+ F +N
Sbjct: 749 PTAEMQPRAHDVAAIA*GGRYACLNFADSVWRLPIPATSAIKDIQKAATKAAEAFR-PDN 573
Query: 145 HNQRSDRDAVDMNMENSKKNVLEVQV---PVLSSEFEDMHHNLLLSIANEPLRSNPPSPT 201
SD D V + + N+ V+V VL+ ++ N+ L SPT
Sbjct: 572 TLMTSDIDTVVAVVATQELNMFRVEVEEEEVLN--MPELWRNMALM-----------SPT 432
Query: 202 NYYG--SNYDDMEIFDTQ 217
+ +G Y+D+ I D Q
Sbjct: 431 HSFGYHDQYEDIHIQDFQ 378
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.314 0.128 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,579,799
Number of Sequences: 36976
Number of extensions: 107679
Number of successful extensions: 1054
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of query: 226
length of database: 9,014,727
effective HSP length: 93
effective length of query: 133
effective length of database: 5,575,959
effective search space: 741602547
effective search space used: 741602547
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)
Medicago: description of AC146573.2