TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146568.12 + phase: 0 /pseudo
         (1737 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG587101 similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana...    62  2e-09
BF647164 weakly similar to GP|6691191|gb F7F22.15 {Arabidopsis t...    41  0.004
TC78796 similar to GP|15810563|gb|AAL07169.1 putative calreticul...    30  6.2

>BG587101 similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana}, partial
            (10%)
          Length = 624

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 37/83 (44%), Positives = 48/83 (57%)
 Frame = +3

Query: 1387 EPLRKSCKAVSGGLLFSRIAMIL*GGVTIAKEQVVFLRGMRCP*RESLKLNHLTVGALIL 1446
            +P R+S K VSGGL  S++       V  A+++ +  RGMRC    S KL +LT G  I 
Sbjct: 156  KPFRRSNKLVSGGLRCSKMPTPSSLSVIHARDREISARGMRCHRTSSWKLRYLTCGGSIS 335

Query: 1447 WDLSLPLPLISIYLFVLTTSPNG 1469
            WD S PL  IS  L +LTT P+G
Sbjct: 336  WDHSHPLTTISTSLLLLTTFPSG 404


>BF647164 weakly similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana},
            partial (6%)
          Length = 469

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 32/72 (44%), Positives = 39/72 (53%)
 Frame = +2

Query: 1603 LIGPSKLLILIKL*LVRKDS*SSMS*KK*DLVRMRTPSFTKRELRSIMTRVW*GESFMLD 1662
            L+G  K L  I      K  *S MS*+ *D   MR P FTK+E ++ M  V  GES    
Sbjct: 41   LLGLLKPLTWITKPPEEKGY*S*MS*RS*D*TPMRMPRFTKKEQKNGMIGV*SGESLERG 220

Query: 1663 NLFCCLIPG*NY 1674
            +L+  L PG*NY
Sbjct: 221  SLYYYLTPG*NY 256


>TC78796 similar to GP|15810563|gb|AAL07169.1 putative calreticulin protein
            {Arabidopsis thaliana}, partial (89%)
          Length = 1605

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +2

Query: 396  KLMKMLWTRMKMLKMRK*LKKRVIKV*LKIKRRKKQREKKVR 437
            KL K +W  +  LK RK LKKR  K  L  KRR+K +EK+ +
Sbjct: 1106 KLWKNIWLIIGRLK-RKLLKKRKKKEGLGKKRRQKGQEKRAK 1228


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.369    0.165    0.601 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,841,917
Number of Sequences: 36976
Number of extensions: 770502
Number of successful extensions: 9274
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1973
Number of HSP's successfully gapped in prelim test: 283
Number of HSP's that attempted gapping in prelim test: 7139
Number of HSP's gapped (non-prelim): 2600
length of query: 1737
length of database: 9,014,727
effective HSP length: 110
effective length of query: 1627
effective length of database: 4,947,367
effective search space: 8049366109
effective search space used: 8049366109
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 65 (29.6 bits)