BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146566.1 + phase: 0
(155 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77987 weakly similar to GP|17979277|gb|AAL49864.1 unknown prot... 144 1e-35
TC85121 similar to GP|12855997|dbj|BAB30531. evidence:NAS~putati... 137 1e-33
TC90836 similar to PIR|T51729|T51729 arginine-tRNA-protein trans... 35 0.009
TC90331 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot... 35 0.016
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 35 0.016
BQ751033 weakly similar to GP|18307453|e probable DNA-directed R... 33 0.035
TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed pr... 33 0.060
TC77517 similar to PIR|T51159|T51159 HMG protein [imported] - Ar... 32 0.079
TC86146 homologue to GP|10334499|emb|CAC10211. hypothetical prot... 32 0.10
TC86145 homologue to GP|10334499|emb|CAC10211. hypothetical prot... 32 0.10
TC86045 similar to PIR|T46225|T46225 alpha NAC-like protein - Ar... 32 0.13
AW690594 similar to GP|23498163|emb hypothetical protein {Plasmo... 31 0.23
BF641220 weakly similar to PIR|G86203|G86 probable N-arginine di... 31 0.23
TC92637 similar to PIR|T39903|T39903 serine-rich protein - fissi... 30 0.30
TC86552 similar to PIR|G85436|G85436 hypothetical protein AT4g36... 30 0.39
TC86553 similar to PIR|G85436|G85436 hypothetical protein AT4g36... 30 0.39
TC79987 similar to GP|9293899|dbj|BAB01802.1 gene_id:MVE11.12~un... 30 0.51
TC76936 similar to GP|20160782|dbj|BAB89723. putative nascent po... 30 0.51
TC82736 similar to GP|14190507|gb|AAK55734.1 At2g17240/T23A1.10 ... 29 0.67
TC82697 similar to GP|23497724|gb|AAN37262.1 hypothetical protei... 29 0.67
>TC77987 weakly similar to GP|17979277|gb|AAL49864.1 unknown protein
{Arabidopsis thaliana}, partial (53%)
Length = 1338
Score = 144 bits (364), Expect = 1e-35
Identities = 69/76 (90%), Positives = 70/76 (91%)
Frame = +1
Query: 18 FYSIMRDSDFFEGMDPFEMMALSDSLAGGSGPCLGPFDSDDDDDDGFRVSRMAAMQEAMA 77
F MRDSDFFEGMDPFEMMALSDSLAGGS PCLGPFDSDDDDDDGFRVSRMAAMQ AMA
Sbjct: 1111 FIPYMRDSDFFEGMDPFEMMALSDSLAGGSXPCLGPFDSDDDDDDGFRVSRMAAMQXAMA 1290
Query: 78 IGMDAFGPDDDEEEFN 93
IGMDAFGPDDDEE+ N
Sbjct: 1291 IGMDAFGPDDDEEKXN 1338
Score = 48.5 bits (114), Expect = 1e-06
Identities = 24/30 (80%), Positives = 24/30 (80%)
Frame = +3
Query: 1 MHDMLDVLGEVDLSSGEFYSIMRDSDFFEG 30
MHDMLDVLGEVDLSSGEFYSI FF G
Sbjct: 1059 MHDMLDVLGEVDLSSGEFYSIHEGLRFF*G 1148
>TC85121 similar to GP|12855997|dbj|BAB30531.
evidence:NAS~putative~unclassifiable {Mus musculus},
partial (10%)
Length = 482
Score = 137 bits (346), Expect = 1e-33
Identities = 64/64 (100%), Positives = 64/64 (100%)
Frame = +2
Query: 92 FNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYT 151
FNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYT
Sbjct: 2 FNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYT 181
Query: 152 DDEY 155
DDEY
Sbjct: 182 DDEY 193
>TC90836 similar to PIR|T51729|T51729 arginine-tRNA-protein transferase 1
[imported] - Arabidopsis thaliana, partial (18%)
Length = 971
Score = 35.4 bits (80), Expect = 0.009
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +3
Query: 91 EFNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEY 150
E + F++A Q+ M+S +D+ G +D + PM H D++ED+E E E E
Sbjct: 309 ESSPFQVAEDQDTMLSQVDESGQEDANDV-PM-----------HGDEDEDEEMVESELES 452
Query: 151 TDDE 154
+DDE
Sbjct: 453 SDDE 464
>TC90331 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
{Homo sapiens}, partial (25%)
Length = 557
Score = 34.7 bits (78), Expect = 0.016
Identities = 29/100 (29%), Positives = 40/100 (40%)
Frame = -1
Query: 55 DSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPD 114
D D DDDDG F DD+EE+F + + G D
Sbjct: 539 DDDGDDDDG------------------EFEDDDEEEDFGAGYL----------VQPVGQD 444
Query: 115 DFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
D P++ + +DD E++ED E+EEE DDE
Sbjct: 443 D-----PLNDGA------ADIDDGEENEDGEEEEEEVDDE 357
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 34.7 bits (78), Expect = 0.016
Identities = 31/102 (30%), Positives = 39/102 (37%), Gaps = 2/102 (1%)
Frame = +3
Query: 55 DSDDDDDDGFRVSRMAAMQEAMA--IGMDAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFG 112
D DDDDDD + +E + G + P+DD E G DD
Sbjct: 330 DEDDDDDDDVQDEDDDGEEEDYSGDEGEEEGDPEDDPEANGA-----------GGSDDGE 476
Query: 113 PDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
DD G DEED+ED EDEE+ D+E
Sbjct: 477 DDDDDG------------------DEEDEEDGEDEEDEEDEE 548
Score = 25.8 bits (55), Expect = 7.4
Identities = 30/86 (34%), Positives = 37/86 (42%)
Frame = +3
Query: 6 DVLGEVDLSSGEFYSIMRDSDFFEGMDPFEMMALSDSLAGGSGPCLGPFDSDDDDDDGFR 65
DV E D E YS D EG DP + D A G+G G D +DDDDDG
Sbjct: 354 DVQDEDDDGEEEDYS--GDEGEEEG-DPED-----DPEANGAG---GSDDGEDDDDDG-- 494
Query: 66 VSRMAAMQEAMAIGMDAFGPDDDEEE 91
+E G D +D+EE+
Sbjct: 495 ------DEEDEEDGEDEEDEEDEEED 554
>BQ751033 weakly similar to GP|18307453|e probable DNA-directed RNA
polymerase I {Neurospora crassa}, partial (7%)
Length = 468
Score = 33.5 bits (75), Expect = 0.035
Identities = 17/49 (34%), Positives = 27/49 (54%)
Frame = -3
Query: 43 LAGGSGPCLGPFDSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEE 91
+A G+G G + +D+DDD +A Q A ++GP+DDE+E
Sbjct: 190 MAAGNGEPRGVGEDNDEDDDDGDGDATSAKQRANREEAVSYGPNDDEDE 44
>TC89427 weakly similar to GP|4557063|gb|AAD22502.1| expressed protein
{Arabidopsis thaliana}, partial (50%)
Length = 753
Score = 32.7 bits (73), Expect = 0.060
Identities = 26/100 (26%), Positives = 38/100 (38%)
Frame = +1
Query: 55 DSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPD 114
D D+DDDD D DDD +E D G +
Sbjct: 316 DDDEDDDD------------------DVNDEDDDNDE-----------------DFSGDE 390
Query: 115 DFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
D DP D + + S DDE+DD+D +D ++ D++
Sbjct: 391 DDEDADPEDDPVPNGAGGSDDDDEDDDDDDDDNDDGEDED 510
Score = 28.9 bits (63), Expect = 0.87
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 136 DDEEDDEDYEDEEEYTDDEY 155
DDE+DD+D DE++ D+++
Sbjct: 319 DDEDDDDDVNDEDDDNDEDF 378
Score = 26.6 bits (57), Expect = 4.3
Identities = 24/95 (25%), Positives = 39/95 (40%)
Frame = +1
Query: 55 DSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPD 114
D +DDDDD + + + F D+D+E+ + A G DD D
Sbjct: 319 DDEDDDDD---------VNDEDDDNDEDFSGDEDDEDADPEDDPVPNGA--GGSDDDDED 465
Query: 115 DFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEE 149
D D D +DE++DE+ +D+E+
Sbjct: 466 DDDDDDDNDDG----------EDEDEDEEEDDDED 540
>TC77517 similar to PIR|T51159|T51159 HMG protein [imported] - Arabidopsis
thaliana, partial (70%)
Length = 907
Score = 32.3 bits (72), Expect = 0.079
Identities = 23/69 (33%), Positives = 29/69 (41%)
Frame = +3
Query: 86 DDDEEEFNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYE 145
DDDEEE + E SG DD H DDEE+D++ E
Sbjct: 501 DDDEEESDKDNSEVNNEDEASGEDD-----------------------HQDDEEEDDEDE 611
Query: 146 DEEEYTDDE 154
D++E DDE
Sbjct: 612 DDDE--DDE 632
>TC86146 homologue to GP|10334499|emb|CAC10211. hypothetical protein {Cicer
arietinum}, partial (95%)
Length = 1084
Score = 32.0 bits (71), Expect = 0.10
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +3
Query: 135 MDDEEDDEDYEDEEEYTDDE 154
+DDE+DDED ++EE+Y D++
Sbjct: 300 VDDEDDDEDDDNEEDYEDED 359
Score = 27.3 bits (59), Expect = 2.5
Identities = 12/16 (75%), Positives = 14/16 (87%), Gaps = 2/16 (12%)
Frame = +3
Query: 136 DDEEDD--EDYEDEEE 149
DDE+DD EDYEDE+E
Sbjct: 315 DDEDDDNEEDYEDEDE 362
>TC86145 homologue to GP|10334499|emb|CAC10211. hypothetical protein {Cicer
arietinum}, partial (91%)
Length = 1311
Score = 32.0 bits (71), Expect = 0.10
Identities = 11/20 (55%), Positives = 18/20 (90%)
Frame = +1
Query: 135 MDDEEDDEDYEDEEEYTDDE 154
+DDE+DDED ++EE+Y D++
Sbjct: 481 VDDEDDDEDDDNEEDYEDED 540
Score = 27.3 bits (59), Expect = 2.5
Identities = 12/16 (75%), Positives = 14/16 (87%), Gaps = 2/16 (12%)
Frame = +1
Query: 136 DDEEDD--EDYEDEEE 149
DDE+DD EDYEDE+E
Sbjct: 496 DDEDDDNEEDYEDEDE 543
>TC86045 similar to PIR|T46225|T46225 alpha NAC-like protein - Arabidopsis
thaliana, partial (69%)
Length = 1166
Score = 31.6 bits (70), Expect = 0.13
Identities = 15/48 (31%), Positives = 25/48 (51%)
Frame = +1
Query: 102 EAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEE 149
E + +D+ P + DA +I + DDE+DDED +DE++
Sbjct: 142 EQQIPSVDETTLKKKPQPEEDDAPIIEDVKDDDKDDEDDDEDDDDEDD 285
>AW690594 similar to GP|23498163|emb hypothetical protein {Plasmodium
falciparum 3D7}, partial (10%)
Length = 633
Score = 30.8 bits (68), Expect = 0.23
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 134 HMDDEEDDEDYEDEEEYTDDE 154
H D+EE++E+ E+EEE DDE
Sbjct: 171 HDDEEEEEEEEEEEEEEDDDE 233
Score = 27.7 bits (60), Expect = 1.9
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 136 DDEEDDEDYEDEEEYTDDEY 155
+DE D+E+ E+EEE +DE+
Sbjct: 114 EDEHDEEEEEEEEEEEEDEH 173
Score = 27.3 bits (59), Expect = 2.5
Identities = 10/19 (52%), Positives = 16/19 (83%)
Frame = +3
Query: 136 DDEEDDEDYEDEEEYTDDE 154
D+EE++E+ E+EE+ DDE
Sbjct: 126 DEEEEEEEEEEEEDEHDDE 182
Score = 27.3 bits (59), Expect = 2.5
Identities = 10/21 (47%), Positives = 16/21 (75%)
Frame = +3
Query: 134 HMDDEEDDEDYEDEEEYTDDE 154
H ++EED+ D E+EEE ++E
Sbjct: 99 HDEEEEDEHDEEEEEEEEEEE 161
Score = 26.9 bits (58), Expect = 3.3
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 136 DDEEDDEDYEDEEEYTDDE 154
+DE DDE+ E+EEE ++E
Sbjct: 162 EDEHDDEEEEEEEEEEEEE 218
>BF641220 weakly similar to PIR|G86203|G86 probable N-arginine dibasic
convertase [imported] - Arabidopsis thaliana, partial
(5%)
Length = 634
Score = 30.8 bits (68), Expect = 0.23
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Frame = +2
Query: 51 LGPFD-SDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDD-----EEEFNVFRMAAMQEAM 104
L PF S D + G + + AA A A A DD + ++R+ ++ +
Sbjct: 122 LSPFRFSTDKESMGLKGAPAAATTAATAAV--ALSSSDDVIVKSPNDNRLYRLVHLKNGL 295
Query: 105 VSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
+ I P+ +P P D ++ +DEEDDE+ +DE E +DE
Sbjct: 296 QALIVH-DPEIYPEGAPKDGSIDEDDEEEDDEDEEDDEEDDDEGEDDEDE 442
Score = 27.7 bits (60), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 136 DDEEDDEDYEDEEEYTDDE 154
D+E+DDE +DE+E +DE
Sbjct: 401 DEEDDDEGEDDEDEEXEDE 457
>TC92637 similar to PIR|T39903|T39903 serine-rich protein - fission yeast
(Schizosaccharomyces pombe), partial (7%)
Length = 671
Score = 30.4 bits (67), Expect = 0.30
Identities = 27/101 (26%), Positives = 42/101 (40%)
Frame = +1
Query: 55 DSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPD 114
D DD+DD+G +R+ + A ++EEE + + S IDD
Sbjct: 310 DRDDEDDEGV*GNRLKISMKRKA---------EEEEEKSGGGGGGKKRRRPSFIDD---- 450
Query: 115 DFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDEY 155
DA +E D+++ EDEE+Y DD+Y
Sbjct: 451 --------DA------------EEVDEDEEEDEEDYDDDDY 513
>TC86552 similar to PIR|G85436|G85436 hypothetical protein AT4g36980
[imported] - Arabidopsis thaliana, partial (59%)
Length = 1785
Score = 30.0 bits (66), Expect = 0.39
Identities = 10/19 (52%), Positives = 16/19 (83%)
Frame = +2
Query: 136 DDEEDDEDYEDEEEYTDDE 154
DD+E+DED ED+E++ D+
Sbjct: 710 DDDEEDEDDEDDEDFNSDD 766
>TC86553 similar to PIR|G85436|G85436 hypothetical protein AT4g36980
[imported] - Arabidopsis thaliana, partial (41%)
Length = 1891
Score = 30.0 bits (66), Expect = 0.39
Identities = 10/19 (52%), Positives = 16/19 (83%)
Frame = +2
Query: 136 DDEEDDEDYEDEEEYTDDE 154
DD+E+DED ED+E++ D+
Sbjct: 2 DDDEEDEDDEDDEDFNSDD 58
>TC79987 similar to GP|9293899|dbj|BAB01802.1 gene_id:MVE11.12~unknown
protein {Arabidopsis thaliana}, partial (73%)
Length = 898
Score = 29.6 bits (65), Expect = 0.51
Identities = 14/37 (37%), Positives = 21/37 (55%)
Frame = +2
Query: 115 DFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYT 151
D G++P + I+ + D+ EDDE+YE EE T
Sbjct: 443 DEGGLEPSKFSQINKLDDEDDDENEDDEEYEVNEEET 553
>TC76936 similar to GP|20160782|dbj|BAB89723. putative nascent polypeptide
associated complex alpha chain {Oryza sativa (japonica
cultivar-group)}, partial (86%)
Length = 914
Score = 29.6 bits (65), Expect = 0.51
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 136 DDEEDDEDYEDEEEYTDD 153
DD+EDDED ED+++ DD
Sbjct: 159 DDDEDDEDDEDDDDEDDD 212
>TC82736 similar to GP|14190507|gb|AAK55734.1 At2g17240/T23A1.10
{Arabidopsis thaliana}, partial (57%)
Length = 597
Score = 29.3 bits (64), Expect = 0.67
Identities = 18/43 (41%), Positives = 21/43 (47%), Gaps = 1/43 (2%)
Frame = +2
Query: 113 PDDFPGIDPMDAALISMM-MHSHMDDEEDDEDYEDEEEYTDDE 154
PD FP PM L M +DEE++E E EEE D E
Sbjct: 341 PDIFPQFSPMKTPLPPPMPADPPEEDEEEEEKREGEEEDPDKE 469
>TC82697 similar to GP|23497724|gb|AAN37262.1 hypothetical protein
{Plasmodium falciparum 3D7}, partial (0%)
Length = 614
Score = 29.3 bits (64), Expect = 0.67
Identities = 11/19 (57%), Positives = 16/19 (83%)
Frame = +3
Query: 136 DDEEDDEDYEDEEEYTDDE 154
DDEEDDE+ ++E+E D+E
Sbjct: 165 DDEEDDEEDDEEDEEEDEE 221
Score = 28.1 bits (61), Expect = 1.5
Identities = 11/17 (64%), Positives = 14/17 (81%)
Frame = +3
Query: 136 DDEEDDEDYEDEEEYTD 152
DDEEDDE+ E+E+E D
Sbjct: 177 DDEEDDEEDEEEDEEVD 227
Score = 25.8 bits (55), Expect = 7.4
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +3
Query: 136 DDEEDDEDYEDEEEYTDDE 154
+D+E+D++ +DEE+ +DE
Sbjct: 162 EDDEEDDEEDDEEDEEEDE 218
Score = 25.4 bits (54), Expect = 9.6
Identities = 7/29 (24%), Positives = 22/29 (75%)
Frame = +3
Query: 126 LISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
++++++ + D+++D++ +DEE+ +DE
Sbjct: 120 ILTLIVRYTLPDKDEDDEEDDEEDDEEDE 206
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.138 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,329,405
Number of Sequences: 36976
Number of extensions: 39022
Number of successful extensions: 1311
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of query: 155
length of database: 9,014,727
effective HSP length: 88
effective length of query: 67
effective length of database: 5,760,839
effective search space: 385976213
effective search space used: 385976213
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)
Medicago: description of AC146566.1