BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146565.7 + phase: 0 /pseudo
(508 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL366605 132 2e-31
TC89839 homologue to SP|P23466|CYAA_SACKL Adenylate cyclase (EC ... 120 9e-28
BE124481 98 7e-21
AL375831 72 7e-17
CB065382 similar to PIR|T09671|T096 RPE15 protein - alfalfa (fra... 74 1e-13
BG648523 similar to GP|9955540|emb| putative protein {Arabidopsi... 37 0.023
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 36 0.031
TC76563 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 36 0.040
TC78971 similar to GP|20260346|gb|AAM13071.1 unknown protein {Ar... 36 0.040
TC82044 similar to PIR|B86285|B86285 hypothetical protein AAD396... 35 0.068
TC76562 similar to PIR|T11622|T11622 extensin class 1 precursor ... 35 0.089
AL376506 homologue to GP|15021744|gb root nodule extensin {Pisum... 34 0.12
BI264438 similar to GP|21427467|gb actin-related protein 6 {Arab... 34 0.12
TC76689 MtN12 34 0.12
TC76311 homologue to GP|3204132|emb|CAA07235.1 extensin {Cicer a... 34 0.15
TC87476 homologue to PIR|T11622|T11622 extensin class 1 precurso... 34 0.15
TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 33 0.20
TC90912 GP|7291633|gb|AAF47056.1| CG12491-PA {Drosophila melanog... 33 0.20
TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk p... 33 0.26
TC76445 similar to PIR|T07623|T07623 extensin homolog HRGP2 - so... 33 0.26
>AL366605
Length = 422
Score = 132 bits (333), Expect = 2e-31
Identities = 63/140 (45%), Positives = 93/140 (66%)
Frame = -3
Query: 152 DVKALRGKEKFGKTAYDLCLVPNVQIPHKFKIPNFEKYKGNSCPEEHLKMYVRRMPAYAQ 211
++KA RG KT DLCLV V +P KFKIP+F++Y G +CP+ H+ YVR+M Y
Sbjct: 417 EIKANRGNADSFKTQ-DLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYKD 241
Query: 212 DDQVLIYYF*ESLAGPASKWYTNLDKTKIQTFRDLYEAFVEQYNYNVDMAPDRSDLQAMT 271
+D ++I+ F +SL A++WYT+L K I TF +L AF Y +N + P+R L++++
Sbjct: 240 NDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKSHYGFNTRLKPNREFLRSLS 61
Query: 272 QGDKETFKEYAQRWRDIAAQ 291
Q +E+F+EYAQRWR AA+
Sbjct: 60 QKKEESFREYAQRWRGAAAR 1
>TC89839 homologue to SP|P23466|CYAA_SACKL Adenylate cyclase (EC 4.6.1.1)
(ATP pyrophosphate-lyase) (Adenylyl cyclase). [Yeast],
partial (0%)
Length = 665
Score = 120 bits (302), Expect = 9e-28
Identities = 62/107 (57%), Positives = 73/107 (67%), Gaps = 2/107 (1%)
Frame = +3
Query: 398 QQPGYQPQFQQYPQ-QLYQQQQPRPQAQR-TQFDPIPMKYADFLPALLEKNLVHTRPPPK 455
Q+P Q Q PQ Q+ Q+ P+ Q Q+ +Q DPIP+KYAD LP LL+KNL+ T P P+
Sbjct: 279 QKPRQQAPRQSIPQNQVPQKFIPQNQVQKASQCDPIPVKYADLLPILLKKNLIQTLPLPR 458
Query: 456 VPERLPAWYRPDKFCAFHQGAPGHDTEYCYTLKAAVQKLIRDKDLSF 502
VP LP WYRPD C FHQGAPGHDTE CY LK VQKLI + SF
Sbjct: 459 VPNSLPPWYRPDLNCVFHQGAPGHDTEQCYPLKEEVQKLIENNVWSF 599
>BE124481
Length = 538
Score = 98.2 bits (243), Expect = 7e-21
Identities = 49/85 (57%), Positives = 59/85 (68%), Gaps = 2/85 (2%)
Frame = +3
Query: 398 QQPGYQPQFQQYPQ-QLYQQQQPRPQAQR-TQFDPIPMKYADFLPALLEKNLVHTRPPPK 455
Q+P Q Q PQ Q+ Q+ P+ Q Q+ +Q DPIP+KYAD LP LL+KNL+ T P P+
Sbjct: 282 QKPRQQAPRQSIPQNQVPQKFIPQNQVQKASQCDPIPVKYADLLPILLKKNLIQTLPLPR 461
Query: 456 VPERLPAWYRPDKFCAFHQGAPGHD 480
VP LP WYRPD C FHQGAPGHD
Sbjct: 462 VPNSLPPWYRPDLNCVFHQGAPGHD 536
>AL375831
Length = 467
Score = 71.6 bits (174), Expect(2) = 7e-17
Identities = 37/106 (34%), Positives = 60/106 (55%), Gaps = 1/106 (0%)
Frame = +2
Query: 105 VPLAAMTYSAPVMHTIPQNEEPIFHSGNMEAYDGVSDLREKY-DELQRDVKALRGKEKFG 163
+P + P++HT+PQ ++ + ++ E+ EL+ +++A RG
Sbjct: 44 LPQTTAAVTEPLVHTLPQGININTQHRSIPVTKTMEEMMEELAKELRHEIQANRGNADSV 223
Query: 164 KTAYDLCLVPNVQIPHKFKIPNFEKYKGNSCPEEHLKMYVRRMPAY 209
KT DLCLV V +P KFKIP+F++Y G +CP+ H+ YVR+M Y
Sbjct: 224 KTQ-DLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNY 358
Score = 33.5 bits (75), Expect(2) = 7e-17
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 212 DDQVLIYYF*ESLAGPASKWYTNLDKTKIQTF 243
+D ++I+ F +SL A++WYT+L K I TF
Sbjct: 366 NDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTF 461
>CB065382 similar to PIR|T09671|T096 RPE15 protein - alfalfa (fragment),
partial (9%)
Length = 624
Score = 74.3 bits (181), Expect = 1e-13
Identities = 42/91 (46%), Positives = 50/91 (54%)
Frame = -2
Query: 417 QQPRPQAQRTQFDPIPMKYADFLPALLEKNLVHTRPPPKVPERLPAWYRPDKFCAFHQGA 476
QQ + Q R F IPM YA+ LP LL + R P+ LP +R D C FHQGA
Sbjct: 509 QQRQ*QQARPTFPLIPMLYAE*LPTLLLRGHCTIRQGKPPPDPLPPRFRSDLKCDFHQGA 330
Query: 477 PGHDTEYCYTLKAAVQKLIRDKDLSFANPLP 507
GHD E CY LK V+KLI L+F N +P
Sbjct: 329 LGHDVEGCYALKHIVKKLINQGKLTFENNVP 237
>BG648523 similar to GP|9955540|emb| putative protein {Arabidopsis thaliana},
partial (9%)
Length = 770
Score = 36.6 bits (83), Expect = 0.023
Identities = 27/97 (27%), Positives = 44/97 (44%), Gaps = 8/97 (8%)
Frame = +3
Query: 373 AHGRPQQNYPAYQHVAAITPATN-AIQQPGYQPQFQQYPQQLYQQQQPRPQAQRTQFDPI 431
+ G +Q +P + P + ++ P Q FQQ PQQ+ Q QQ Q P+
Sbjct: 363 SQGEQKQPHPGSIGAPPLPPGPHPSLLNPNQQQPFQQNPQQIPQHQQQLQQ----HMGPL 530
Query: 432 PM-------KYADFLPALLEKNLVHTRPPPKVPERLP 461
PM +++ L ++L RPPP++P +P
Sbjct: 531 PMPPNMPQIQHSSHSSMLPHQHL--PRPPPQMPHGMP 635
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 36.2 bits (82), Expect = 0.031
Identities = 26/86 (30%), Positives = 32/86 (36%), Gaps = 1/86 (1%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
PPPPPP + SS P T Y P+ S P P A P + P+
Sbjct: 302 PPPPPPPCVEPPPPSSPAPHQTPYHPPPSPSPPP------SPVYAYPSPPPPVYTSPPPS 463
Query: 92 HQYVAHVPPPPI-KVPLAAMTYSAPV 116
Y PPPP+ P Y P+
Sbjct: 464 PVYAYPSPPPPVYSSPPPPPVYEGPI 541
Score = 33.5 bits (75), Expect = 0.20
Identities = 29/97 (29%), Positives = 34/97 (34%)
Frame = +2
Query: 30 NQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQM 89
N PPPPPP A S P Y+ P A P P P
Sbjct: 47 NSPPPPPP---PAPVFSPPPPVPYYYSSPPPPPAHSPPPPPXSP-------PPPPHSPTP 196
Query: 90 PTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEP 126
P + Y++ PPPP+ P YS P P E P
Sbjct: 197 PVYPYLSPPPPPPVHSP-PPPVYSPPPPSPPPCVEPP 304
>TC76563 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (34%)
Length = 507
Score = 35.8 bits (81), Expect = 0.040
Identities = 21/84 (25%), Positives = 32/84 (38%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S IP Y +P +P P++ ++ + P
Sbjct: 173 PSPPPPYYYKSPPPPSPIPKTPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPSPP 328
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 329 PPYYYKSPPPPSPSPPPPYYYKSP 400
Score = 30.0 bits (66), Expect = 2.2
Identities = 19/82 (23%), Positives = 30/82 (36%)
Frame = +2
Query: 34 PPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPTHQ 93
PPPP+ ++ S P Y +P +P P++ ++ + P
Sbjct: 131 PPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPIPKTPYY--------YKSPPPPSPSPPPP 286
Query: 94 YVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 287 YYYKSPPPPSPSPPPPYYYKSP 352
Score = 29.6 bits (65), Expect = 2.9
Identities = 17/71 (23%), Positives = 28/71 (38%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ ++ + +P
Sbjct: 317 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPIPH 472
Query: 92 HQYVAHVPPPP 102
Y PPPP
Sbjct: 473 TPYYYKSPPPP 505
>TC78971 similar to GP|20260346|gb|AAM13071.1 unknown protein {Arabidopsis
thaliana}, partial (48%)
Length = 2260
Score = 35.8 bits (81), Expect = 0.040
Identities = 24/80 (30%), Positives = 34/80 (42%)
Frame = +1
Query: 357 FGNNFPRKKAPEVGMVAHGRPQQNYPAYQHVAAITPATNAIQQPGYQPQFQQYPQQLYQQ 416
F + P++ P+ + + QQ P Q + P QQP +QPQ Q QQ Q
Sbjct: 235 FNFSTPQQSQPQQTLFQPQQQQQQSPFQQQSSLFQP-----QQPQFQPQQQFQQQQFQAQ 399
Query: 417 QQPRPQAQRTQFDPIPMKYA 436
QQ + Q D P Y+
Sbjct: 400 QQQQQQLFLFTNDKTPASYS 459
>TC82044 similar to PIR|B86285|B86285 hypothetical protein AAD39642.1
[imported] - Arabidopsis thaliana, partial (16%)
Length = 950
Score = 35.0 bits (79), Expect = 0.068
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +1
Query: 60 THSAPQRSAPWFQPFTAGEIFRPIACEAQMP-THQYVAHVPPPPIKV-PLAAMTYSAPVM 117
T + P+ P++QP P++ A P ++ + H PPPP ++ P + Y P +
Sbjct: 484 TQTDPRPQNPYYQPSEQP----PVSSYAHPPPSYGHSHHQPPPPYQIPPTSTAPYPPPQV 651
Query: 118 HTIPQNEEPIFHSGNMEAYDG 138
H Q + P H AY G
Sbjct: 652 H---QQQPPANHDYGQPAYPG 705
>TC76562 similar to PIR|T11622|T11622 extensin class 1 precursor - cowpea,
partial (48%)
Length = 1391
Score = 34.7 bits (78), Expect = 0.089
Identities = 24/99 (24%), Positives = 39/99 (39%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S IP Y +P +P P++ ++ + +P
Sbjct: 44 PSPPPPYYYKSPPPPSPIPHTPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPIPH 199
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEPIFHS 130
Y PPPP KV Y++P + P H+
Sbjct: 200 TPYYYKSPPPP-KVLPPPYYYNSPPPPVAYPHPHPYHHA 313
>AL376506 homologue to GP|15021744|gb root nodule extensin {Pisum sativum},
partial (68%)
Length = 470
Score = 34.3 bits (77), Expect = 0.12
Identities = 26/92 (28%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Frame = +2
Query: 30 NQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQM 89
+ PPPPP + S P Y HS P + P +P+
Sbjct: 128 SSPPPPPVHTYPKPVYHSPPPPVHTYPKPVYHSPPPPVHKYPHP-------KPVYHSPPP 286
Query: 90 PTHQY-----VAHVPPPPI-KVPLAAMTYSAP 115
P H+Y V H PPPP+ K P Y +P
Sbjct: 287 PVHKYPHPHPVYHSPPPPVHKYPHPHPVYHSP 382
>BI264438 similar to GP|21427467|gb actin-related protein 6 {Arabidopsis
thaliana}, partial (43%)
Length = 695
Score = 34.3 bits (77), Expect = 0.12
Identities = 22/63 (34%), Positives = 30/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 23 KVLSTAQNQPPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPF-TAGEIFR 81
+ LST PPPPPP + + SA P TPT +A S P F P +A +
Sbjct: 10 QTLSTPLPPPPPPPPPNKTSPPPPSAAPSIAAT*STPTSNA--ISGPTFSPLSSASTLLN 183
Query: 82 PIA 84
P++
Sbjct: 184PLS 192
>TC76689 MtN12
Length = 759
Score = 34.3 bits (77), Expect = 0.12
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Frame = +1
Query: 33 PPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPTH 92
PPPPP T + P + +P P +P+ P H
Sbjct: 31 PPPPPVHTYPK---------------PVYHSPPPPVHHTYP-------KPVYHSPPPPVH 144
Query: 93 QY-----VAHVPPPPIKV-PLAAMTYSAPVMHTIPQNEEPIFHS 130
Y V H PPPP+ P P +HT + +P++HS
Sbjct: 145 TYPHPKPVYHSPPPPVHTYPKPVYHSPPPPVHTYVPHPKPVYHS 276
>TC76311 homologue to GP|3204132|emb|CAA07235.1 extensin {Cicer arietinum},
partial (77%)
Length = 973
Score = 33.9 bits (76), Expect = 0.15
Identities = 20/84 (23%), Positives = 30/84 (34%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ + S P Y +P +P P++ ++ + P
Sbjct: 11 PSPPPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPSPP 166
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 167 PPYYYQSPPPPSPTPHTPYHYKSP 238
Score = 32.0 bits (71), Expect = 0.58
Identities = 23/98 (23%), Positives = 36/98 (36%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ ++ + P
Sbjct: 59 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYY--------YQSPPPPSPTPH 214
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEPIFH 129
Y PPPP P Y +P P + P +H
Sbjct: 215 TPYHYKSPPPPTASPPPPYHYVSP---PPPTSSPPPYH 319
Score = 29.3 bits (64), Expect = 3.7
Identities = 25/84 (29%), Positives = 32/84 (37%), Gaps = 9/84 (10%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTP---THSAP------QRSAPWFQPFTAGEIFRP 82
P PPPP+ Q+ S P + +P T S P P P P
Sbjct: 155 PSPPPPYYYQSPPPPSPTPHTPYHYKSPPPPTASPPPPYHYVSPPPPTSSPPPYHYTSPP 334
Query: 83 IACEAQMPTHQYVAHVPPPPIKVP 106
A PT+ Y + PPPP+K P
Sbjct: 335 PPSPAPAPTYIYKS--PPPPMKSP 400
>TC87476 homologue to PIR|T11622|T11622 extensin class 1 precursor - cowpea,
partial (48%)
Length = 939
Score = 33.9 bits (76), Expect = 0.15
Identities = 22/84 (26%), Positives = 33/84 (39%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ SA P Y +P +P P+ G P + P
Sbjct: 474 PSPPPPYVYKSPPPPSASPPPPYYYKSPPPPSPSPPPPY------GYKSPPPPSPSPPPP 635
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
+ Y + PP P P Y++P
Sbjct: 636 YIYKSPPPPSPSPPPYHPYLYNSP 707
Score = 32.7 bits (73), Expect = 0.34
Identities = 22/94 (23%), Positives = 37/94 (38%), Gaps = 3/94 (3%)
Frame = +3
Query: 25 LSTAQNQPP---PPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFR 81
+ST+ ++PP PPPP+ ++ S P +P +P P+ +++
Sbjct: 348 ISTSHHRPPSPSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPY--------VYK 503
Query: 82 PIACEAQMPTHQYVAHVPPPPIKVPLAAMTYSAP 115
+ P Y PPPP P Y +P
Sbjct: 504 SPPPPSASPPPPYYYKSPPPPSPSPPPPYGYKSP 605
Score = 31.6 bits (70), Expect = 0.75
Identities = 19/84 (22%), Positives = 30/84 (35%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P +P +P P+ +++ P
Sbjct: 41 PSPPPPYVYKSPPPPSPSPPPPYVYKSPPPPSPSPPPPY--------VYKSPPPPTPSPP 196
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y+ PPPP P Y +P
Sbjct: 197 PPYIYKSPPPPSPSPPPPYVYKSP 268
>TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (32%)
Length = 777
Score = 33.5 bits (75), Expect = 0.20
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P + +P +P P++ P + P
Sbjct: 121 PSPPPPYYYKSPPPPSPSPPPPYHYQSPPPPSPISHPPYYYKSP------PPPSPSPPPP 282
Query: 92 HQYVAHVPPPPIKVP 106
+ YV+ PPPP+K P
Sbjct: 283 YHYVS--PPPPVKSP 321
Score = 32.0 bits (71), Expect = 0.58
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ P + P
Sbjct: 25 PSPPPPYYYKSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYYKSP------PPPSPSPPPP 186
Query: 92 HQYVAHVPPPPIKVP 106
+ Y + PP PI P
Sbjct: 187 YHYQSPPPPSPISHP 231
Score = 30.8 bits (68), Expect = 1.3
Identities = 19/71 (26%), Positives = 26/71 (35%)
Frame = +1
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ Q+ S I Y +P +P P+ + P P
Sbjct: 169 PSPPPPYHYQSPPPPSPISHPPYYYKSPPPPSPSPPPPYHYVSPPPPVKSP-------PP 327
Query: 92 HQYVAHVPPPP 102
Y+ PPPP
Sbjct: 328 PTYIYASPPPP 360
>TC90912 GP|7291633|gb|AAF47056.1| CG12491-PA {Drosophila melanogaster},
partial (7%)
Length = 524
Score = 33.5 bits (75), Expect = 0.20
Identities = 18/70 (25%), Positives = 34/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 1 LKTKIEELESM-KTNMDELSELVKVLSTAQNQPPPPPPFSTQAEASSSAIPDWTIYADTP 59
L + + E++ KT + + + + Q PP P + + SSS+ P +++D P
Sbjct: 165 LPARTSDFETLIKTALLSATNVSGITKGQLRQFSPPQPSNDSSSDSSSSTPSVVVFSDQP 344
Query: 60 THSAPQRSAP 69
+ SAP + P
Sbjct: 345 SSSAPDSTPP 374
>TC83149 similar to GP|13561982|gb|AAK30594.1 flagelliform silk protein
{Argiope trifasciata}, partial (3%)
Length = 1177
Score = 33.1 bits (74), Expect = 0.26
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Frame = +3
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSA-----PQRSAPWFQPFTAGEIFRPIACE 86
PPPPPP + + P +P+ A PQR+ P P T RP
Sbjct: 168 PPPPPPLPQHPKPPQKSPPRMRRSKPSPSSPAATPLWPQRTTPPPSPSTP----RPSP*T 335
Query: 87 AQMPTHQYVAHVPPPPIKVPLAAMTYSAPVMHTIPQNEEP 126
P+ A +P PP + L P + P +P
Sbjct: 336 PATPSTSPTAPLPTPPPRTTLPPALTPRPPSPSTPPTPKP 455
>TC76445 similar to PIR|T07623|T07623 extensin homolog HRGP2 - soybean
(fragment), partial (76%)
Length = 821
Score = 33.1 bits (74), Expect = 0.26
Identities = 20/84 (23%), Positives = 31/84 (36%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P Y +P +P P++ ++ + P
Sbjct: 2 PSPPPPYYYKSPPPPSPSPPSPYYYKSPPPPSPSPPPPYY--------YKSPPPPSPSPP 157
Query: 92 HQYVAHVPPPPIKVPLAAMTYSAP 115
Y PPPP P Y +P
Sbjct: 158 PPYYYKSPPPPSPSPPPPYHYQSP 229
Score = 32.0 bits (71), Expect = 0.58
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ ++ S P + +P +P P + P + P
Sbjct: 146 PSPPPPYYYKSPPPPSPSPPPPYHYQSPPPPSPISHPPNYYKSP------PPPSPSPPPP 307
Query: 92 HQYVAHVPPPPIK-VPLAAMTYSAP 115
+ YV+ PPPP+K P A Y++P
Sbjct: 308 YHYVS--PPPPVKSPPPPAYIYASP 376
Score = 31.6 bits (70), Expect = 0.75
Identities = 20/72 (27%), Positives = 27/72 (36%)
Frame = +2
Query: 32 PPPPPPFSTQAEASSSAIPDWTIYADTPTHSAPQRSAPWFQPFTAGEIFRPIACEAQMPT 91
P PPPP+ Q+ S I Y +P +P P+ + P P
Sbjct: 194 PSPPPPYHYQSPPPPSPISHPPNYYKSPPPPSPSPPPPYHYVSPPPPVKSP-------PP 352
Query: 92 HQYVAHVPPPPI 103
Y+ PPPPI
Sbjct: 353 PAYIYASPPPPI 388
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,508,382
Number of Sequences: 36976
Number of extensions: 246584
Number of successful extensions: 4364
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 2555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4061
length of query: 508
length of database: 9,014,727
effective HSP length: 100
effective length of query: 408
effective length of database: 5,317,127
effective search space: 2169387816
effective search space used: 2169387816
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146565.7