TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146561.5 + phase: 2 /pseudo/partial
         (263 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC88626 similar to PIR|T04740|T04740 hypothetical protein F6G17....   348  9e-97
AW695502 weakly similar to GP|16944811|em resistance gene-like {...    30  0.95
TC88609 similar to GP|15148914|gb|AAK84884.1 NAC domain protein ...    28  4.7
TC84032 similar to GP|10944739|emb|CAC14089. hypothetical protei...    27  6.1

>TC88626 similar to PIR|T04740|T04740 hypothetical protein F6G17.110 -
           Arabidopsis thaliana, partial (33%)
          Length = 1968

 Score =  348 bits (894), Expect = 9e-97
 Identities = 168/178 (94%), Positives = 168/178 (94%)
 Frame = +2

Query: 29  RTLDIAKTVMKERSYVHGKTDQIIHLSNDGKLEEIMHAKSCSDLYKVVGEDFWSSTWCNS 88
           RTLDIAKTVMKERSYVHGKTDQIIHLSNDGKLEEIMHAKSCSDLYKVVGEDFWSSTWCNS
Sbjct: 809 RTLDIAKTVMKERSYVHGKTDQIIHLSNDGKLEEIMHAKSCSDLYKVVGEDFWSSTWCNS 988

Query: 89  TAFEGKQLEGTRVTLVKMGQHGFDFAIRTPCTPARWEDYDAEMAMAWEALCNAYCGENYG 148
           TAFEGKQLEGTRVTLVKMGQHGFDFAIRTPCTPARWEDYDAEMAMAWEALCNAYCGENYG
Sbjct: 989 TAFEGKQLEGTRVTLVKMGQHGFDFAIRTPCTPARWEDYDAEMAMAWEALCNAYCGENYG 1168

Query: 149 STDFDVLENVRDAILRMTYYWYNFMPLSRGTAAVGFAVMLGLLLAANMEFTGSIPQGF 206
           STDFDVLENVRDAILRMTYYWYNFMPLSRGTAAVGFAVMLGLLLA         P GF
Sbjct: 1169STDFDVLENVRDAILRMTYYWYNFMPLSRGTAAVGFAVMLGLLLAC*YGVHRKHPTGF 1342



 Score =  147 bits (372), Expect = 3e-36
 Identities = 71/72 (98%), Positives = 71/72 (98%)
 Frame = +3

Query: 192  LAANMEFTGSIPQGFQVDWEAILNLDPNSFVDSVKSWLYPSLKVTTSWKDYHDVASTFAT 251
            L ANMEFTGSIPQGFQVDWEAILNLDPNSFVDSVKSWLYPSLKVTTSWKDYHDVASTFAT
Sbjct: 1299 LLANMEFTGSIPQGFQVDWEAILNLDPNSFVDSVKSWLYPSLKVTTSWKDYHDVASTFAT 1478

Query: 252  TGSVVAALSSYD 263
            TGSVVAALSSYD
Sbjct: 1479 TGSVVAALSSYD 1514



 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   EEFNSGFGSHTPMILGQAKVVRYFPNYERTLDIAKTVMKE 40
           EEFNSGFGSHTPMILGQAKVVRYFPNYER  DI  +++ +
Sbjct: 655 EEFNSGFGSHTPMILGQAKVVRYFPNYER*RDIFNSILTD 774


>AW695502 weakly similar to GP|16944811|em resistance gene-like {Solanum
           tuberosum subsp. andigena}, partial (7%)
          Length = 480

 Score = 30.0 bits (66), Expect = 0.95
 Identities = 19/47 (40%), Positives = 26/47 (54%), Gaps = 1/47 (2%)
 Frame = +3

Query: 41  RSYVHGKTDQIIHLSNDGKLEEIMHAKSCSDLYKVV-GEDFWSSTWC 86
           R+Y+H   D+ I    D    E++ A   S LY VV  E++ SSTWC
Sbjct: 120 RNYIHTYIDKKIE-KGDEVWAELVKAIKQSTLYLVVFSENYASSTWC 257


>TC88609 similar to GP|15148914|gb|AAK84884.1 NAC domain protein NAC2
           {Phaseolus vulgaris}, partial (71%)
          Length = 1076

 Score = 27.7 bits (60), Expect = 4.7
 Identities = 15/42 (35%), Positives = 24/42 (56%), Gaps = 1/42 (2%)
 Frame = +1

Query: 33  IAKTVMKERSY-VHGKTDQIIHLSNDGKLEEIMHAKSCSDLY 73
           + KT+ ++  Y  H   D II  ++DG+LE +   +SCS  Y
Sbjct: 496 MGKTLQQKEDYSTHQFNDSIITNNDDGELEMMNLTRSCSLTY 621


>TC84032 similar to GP|10944739|emb|CAC14089. hypothetical protein
           {Arabidopsis thaliana}, partial (7%)
          Length = 675

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 41  RSYVHGKTDQIIHLSNDGKLEEIMHAKSCSDLYKVV-GEDFWSSTWCNSTAFEGKQL 96
           R ++H   D +I    D    E++ A   S L+ VV  +++ SSTWC +   E  +L
Sbjct: 179 RKHIHTYIDNLIE-KGDQVWAELVKAMKQSTLFLVVFSKNYASSTWCLNELVEIMEL 346


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.134    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,870,305
Number of Sequences: 36976
Number of extensions: 122397
Number of successful extensions: 582
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of query: 263
length of database: 9,014,727
effective HSP length: 94
effective length of query: 169
effective length of database: 5,538,983
effective search space: 936088127
effective search space used: 936088127
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)