BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146559.3 + phase: 0
(130 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC81135 weakly similar to GP|10177856|dbj|BAB11208. phloem-speci... 258 4e-70
BF643821 weakly similar to PIR|F84434|F844 lectin-like protein [... 211 5e-56
TC92307 weakly similar to PIR|E84434|E84434 probable phloem-spec... 204 1e-53
TC79147 weakly similar to GP|10177856|dbj|BAB11208. phloem-speci... 199 2e-52
TC79882 weakly similar to PIR|E84434|E84434 probable phloem-spec... 198 6e-52
TC80561 weakly similar to GP|10177856|dbj|BAB11208. phloem-speci... 154 9e-39
TC90625 weakly similar to GP|10177856|dbj|BAB11208. phloem-speci... 144 1e-35
AJ501129 weakly similar to GP|10177856|dbj phloem-specific lecti... 115 4e-27
TC84458 weakly similar to PIR|B96604|B96604 hypothetical protein... 94 1e-20
BG588872 weakly similar to GP|21592660|gb phloem-specific lectin... 87 2e-18
TC91143 similar to PIR|T47557|T47557 hypothetical protein F8J2.1... 86 4e-18
TC76820 weakly similar to GP|18175688|gb|AAL59911.1 unknown prot... 85 7e-18
AW694203 weakly similar to PIR|C96656|C96 unknown protein 43836... 78 9e-16
TC82508 similar to PIR|T50527|T50527 hypothetical protein T27I15... 77 1e-15
BF520962 weakly similar to PIR|C96656|C96 unknown protein 43836... 73 3e-14
TC89219 weakly similar to PIR|C96656|C96656 unknown protein 438... 46 1e-12
TC80392 weakly similar to GP|15088626|gb|AAK84134.1 nictaba {Nic... 61 1e-10
TC82238 weakly similar to GP|8570046|dbj|BAA96751.1 Similar to A... 49 6e-07
CB891284 weakly similar to GP|22122920|gb unknown protein {Oryza... 47 3e-06
TC86966 similar to GP|6850934|emb|CAB71030.1 lectin-like protein... 28 0.78
>TC81135 weakly similar to GP|10177856|dbj|BAB11208. phloem-specific
lectin-like protein {Arabidopsis thaliana}, partial
(32%)
Length = 1186
Score = 258 bits (660), Expect = 4e-70
Identities = 127/127 (100%), Positives = 127/127 (100%)
Frame = +2
Query: 1 MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP 60
MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP
Sbjct: 98 MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP 277
Query: 61 SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNW 120
SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNW
Sbjct: 278 SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNW 457
Query: 121 ISMPDSR 127
ISMPDSR
Sbjct: 458 ISMPDSR 478
>BF643821 weakly similar to PIR|F84434|F844 lectin-like protein [imported] -
Arabidopsis thaliana, partial (14%)
Length = 584
Score = 211 bits (538), Expect = 5e-56
Identities = 102/130 (78%), Positives = 116/130 (88%), Gaps = 3/130 (2%)
Frame = +2
Query: 1 MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSD---ISSIIS 57
MTE ++L EGCI+AI+SRTTP DAGRLSV SKTF SA+DSDAVWNQFLPSD I SIIS
Sbjct: 74 MTEFEELSEGCISAIISRTTPADAGRLSVVSKTFLSAADSDAVWNQFLPSDSHFIDSIIS 253
Query: 58 HSPSLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRY 117
HSPSL N+P+KK LYLALSD P+IID+D+KS QL+RKSGKKCYML+ARSL+I WGDDRRY
Sbjct: 254 HSPSLANVPSKKALYLALSDLPIIIDNDQKSFQLDRKSGKKCYMLAARSLSIAWGDDRRY 433
Query: 118 WNWISMPDSR 127
WNWISMP+SR
Sbjct: 434 WNWISMPNSR 463
>TC92307 weakly similar to PIR|E84434|E84434 probable phloem-specific lectin
[imported] - Arabidopsis thaliana, partial (19%)
Length = 817
Score = 204 bits (518), Expect = 1e-53
Identities = 98/127 (77%), Positives = 110/127 (86%)
Frame = +1
Query: 1 MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP 60
MT ++LPEGCIAA++S TTP+DA RLS SK F SASDSDAVWN+FLPSDISSIIS P
Sbjct: 10 MTAFEELPEGCIAAVLSSTTPVDACRLSFISKNFLSASDSDAVWNRFLPSDISSIISQFP 189
Query: 61 SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNW 120
SL+NIPTKKDLY+ALSDRP+IID+ KKS QLERKSGKKCYMLSARSLAI WGD +YWNW
Sbjct: 190 SLSNIPTKKDLYIALSDRPIIIDNGKKSFQLERKSGKKCYMLSARSLAITWGDTDQYWNW 369
Query: 121 ISMPDSR 127
MP+SR
Sbjct: 370 TVMPESR 390
>TC79147 weakly similar to GP|10177856|dbj|BAB11208. phloem-specific
lectin-like protein {Arabidopsis thaliana}, partial
(32%)
Length = 958
Score = 199 bits (507), Expect = 2e-52
Identities = 95/127 (74%), Positives = 109/127 (85%)
Frame = +2
Query: 1 MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP 60
MT +DL EGCI++I+SRTTP+DAGRLSV SKTF SA+DSDAVWN FLPSD++SIIS SP
Sbjct: 23 MTGFEDLAEGCISSILSRTTPVDAGRLSVVSKTFLSAADSDAVWNHFLPSDVNSIISQSP 202
Query: 61 SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNW 120
SL N P+KK LYL LSDRP+IID KKS QL+RKSGKKCYML+ARSL I+WGDD RYW W
Sbjct: 203 SLANAPSKKALYLTLSDRPIIIDDAKKSFQLDRKSGKKCYMLAARSLHIIWGDDDRYWIW 382
Query: 121 ISMPDSR 127
+MPDSR
Sbjct: 383 TAMPDSR 403
>TC79882 weakly similar to PIR|E84434|E84434 probable phloem-specific lectin
[imported] - Arabidopsis thaliana, partial (14%)
Length = 636
Score = 198 bits (503), Expect = 6e-52
Identities = 96/127 (75%), Positives = 110/127 (86%)
Frame = +1
Query: 1 MTEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP 60
MTE ++LPEGCI+AI+SRTTP DAGRLSV SKT SA+DSDAVWNQFLPSD S I
Sbjct: 61 MTEFEELPEGCISAILSRTTPADAGRLSVVSKTILSAADSDAVWNQFLPSD-SHFIDSII 237
Query: 61 SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNW 120
SL N+PTKK LYLALSD P+IID+D+KSIQL+RKSGKKCYML+ARSL+I WG+D RYWNW
Sbjct: 238 SLANVPTKKSLYLALSDSPIIIDNDQKSIQLDRKSGKKCYMLAARSLSIAWGNDDRYWNW 417
Query: 121 ISMPDSR 127
I+MPDSR
Sbjct: 418 IAMPDSR 438
>TC80561 weakly similar to GP|10177856|dbj|BAB11208. phloem-specific
lectin-like protein {Arabidopsis thaliana}, partial
(52%)
Length = 1436
Score = 154 bits (389), Expect = 9e-39
Identities = 78/130 (60%), Positives = 97/130 (74%), Gaps = 5/130 (3%)
Frame = +3
Query: 3 EIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSP-- 60
E DLPEGCI ++S TTP D RLS+ S TFRSA++SD+VW++FLPSD SIIS S
Sbjct: 159 EFHDLPEGCIENVLSFTTPRDVARLSLVSSTFRSAAESDSVWDKFLPSDYHSIISKSDAE 338
Query: 61 ---SLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRY 117
SL+ +P KKDLY+ L+ +P++I++ KKS QL++ GKKCYMLSARSL IVWGD RY
Sbjct: 339 IDNSLSVLP-KKDLYVNLTQKPLLIENGKKSFQLDKVDGKKCYMLSARSLFIVWGDTPRY 515
Query: 118 WNWISMPDSR 127
W WI PDSR
Sbjct: 516 WRWIPDPDSR 545
>TC90625 weakly similar to GP|10177856|dbj|BAB11208. phloem-specific
lectin-like protein {Arabidopsis thaliana}, partial (9%)
Length = 892
Score = 144 bits (363), Expect = 1e-35
Identities = 70/128 (54%), Positives = 97/128 (75%), Gaps = 4/128 (3%)
Frame = +2
Query: 4 IQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLT 63
I+ LPEGCIA I+S T P+D+ RLS+ K F SA+ SD VW++FLPSD+ SIIS SPS +
Sbjct: 224 IEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSAS 403
Query: 64 NI----PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWN 119
++ P+KK LYL LSD P++I++ KKS QLE++SG+K YMLSAR ++I GD ++W+
Sbjct: 404 SLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWD 583
Query: 120 WISMPDSR 127
W +P+SR
Sbjct: 584 WPILPESR 607
>AJ501129 weakly similar to GP|10177856|dbj phloem-specific lectin-like
protein {Arabidopsis thaliana}, partial (33%)
Length = 558
Score = 115 bits (289), Expect = 4e-27
Identities = 58/105 (55%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
Frame = +2
Query: 27 LSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI----PTKKDLYLALSDRPVII 82
LSV S F SA++SD VW++FLPSD+ SI+S S S +++ P+KK LYL LSD P++I
Sbjct: 86 LSVVS--FCSAAESDIVWDRFLPSDLISIVSDSQSASSLFTTSPSKKSLYLTLSDHPILI 259
Query: 83 DHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDSR 127
++ K S QLE++SGKK YML AR L+I WGD YW+WI +P+SR
Sbjct: 260 NNGKTSFQLEKQSGKKVYMLGARDLSIAWGDTPCYWDWIILPESR 394
>TC84458 weakly similar to PIR|B96604|B96604 hypothetical protein F14G9.14
[imported] - Arabidopsis thaliana, partial (24%)
Length = 766
Score = 94.4 bits (233), Expect = 1e-20
Identities = 51/124 (41%), Positives = 77/124 (61%), Gaps = 2/124 (1%)
Frame = +1
Query: 8 PEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISH--SPSLTNI 65
PE C+A I+S T+P+D R+S+ S +S +DSD VW +FLP + I+S P L +
Sbjct: 28 PEDCVAHILSFTSPIDVCRVSLISSIVKSMADSDNVWEKFLPHNYQGIVSRLVDPPL-SC 204
Query: 66 PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
+KK+L LA +P +ID K +E+ +GK CY LSAR L+I +G++ +W+W +
Sbjct: 205 SSKKEL-LARLCKPQLIDDGNKMFSIEKTTGKICYSLSARQLSITFGNNPLHWSWRQVQG 381
Query: 126 SRLA 129
SR A
Sbjct: 382 SRFA 393
>BG588872 weakly similar to GP|21592660|gb phloem-specific lectin PP2-like
protein {Arabidopsis thaliana}, partial (55%)
Length = 655
Score = 87.0 bits (214), Expect = 2e-18
Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Frame = +1
Query: 15 IVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISH--SPSLTNIPTKKDLY 72
I+S T+PLD R+S+ S +S +DSD +W +FLP IIS P L +KK+L+
Sbjct: 19 ILSFTSPLDVCRVSLLSSVVQSMADSDFLWEKFLPHKYQEIISRLVDPPLP-CSSKKELF 195
Query: 73 LALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDSRLA 129
L +P +ID K +E+ +GK CY+LSAR L+I +G+ YW+W + SR A
Sbjct: 196 ARLC-KPSLIDDGNKMFSIEKTTGKICYLLSARQLSITFGNTSLYWSWKQVQGSRFA 363
>TC91143 similar to PIR|T47557|T47557 hypothetical protein F8J2.170 -
Arabidopsis thaliana, partial (60%)
Length = 669
Score = 85.9 bits (211), Expect = 4e-18
Identities = 42/124 (33%), Positives = 69/124 (54%), Gaps = 2/124 (1%)
Frame = +1
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI 65
D+PE C+A + TP + L+ ++ FR A+ +D+VW LPS+ ++ P
Sbjct: 154 DIPENCVARVFLHLTPPEICNLARLNRAFRGAASADSVWESKLPSNYQHLLRLMPEEQRC 333
Query: 66 P--TKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISM 123
+KKD++ S +P+ D K + L+R +G+ C +SA+ L+I DDRRYW W+
Sbjct: 334 RNLSKKDIFAVFS-KPLPFDDGNKQLWLDRVTGRVCMSISAKGLSITGIDDRRYWTWVPT 510
Query: 124 PDSR 127
+SR
Sbjct: 511 EESR 522
>TC76820 weakly similar to GP|18175688|gb|AAL59911.1 unknown protein
{Arabidopsis thaliana}, partial (67%)
Length = 1388
Score = 85.1 bits (209), Expect = 7e-18
Identities = 48/128 (37%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Frame = +2
Query: 2 TEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPS 61
T + D+PE CI++I+ R P + +L+ +KTF AS D VW LP ++
Sbjct: 182 TCLDDIPESCISSIMMRLDPQEICKLARVNKTFHRASSDDYVWESKLPPSYKFLVKKILG 361
Query: 62 LTNI--PTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWN 119
+ TKK++Y L +P D K I L+R SG+ C +S++S I DDRRYWN
Sbjct: 362 EEKLCSMTKKEIYAKLC-QPNFFDGGTKEILLDRCSGQVCLFISSKSFKITGIDDRRYWN 538
Query: 120 WISMPDSR 127
+IS +SR
Sbjct: 539 YISTEESR 562
>AW694203 weakly similar to PIR|C96656|C96 unknown protein 43836-42510
[imported] - Arabidopsis thaliana, partial (52%)
Length = 621
Score = 78.2 bits (191), Expect = 9e-16
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Frame = +1
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSD----ISSIISHSPS 61
+LPE C+A+I+ P +L+ ++ FR+AS +D VW LP + ++ I H P
Sbjct: 169 ELPESCVASIIGYMDPPQICQLATLNRAFRAASSADFVWESKLPPNYHLLLAKIFHHFP- 345
Query: 62 LTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSA-RSLAIVWGDDRRYWNW 120
N+ K+D+Y +L R ID K + ++R +GK C +SA + L+++ DDRRYWN+
Sbjct: 346 -INL-GKRDIYASLC-RLNTIDDGTKKVWIDRATGKLCLAISANKGLSVLGVDDRRYWNY 516
Query: 121 ISMPDSR 127
I +SR
Sbjct: 517 IITEESR 537
>TC82508 similar to PIR|T50527|T50527 hypothetical protein T27I15_150 -
Arabidopsis thaliana, partial (71%)
Length = 1761
Score = 77.4 bits (189), Expect = 1e-15
Identities = 45/129 (34%), Positives = 70/129 (53%), Gaps = 7/129 (5%)
Frame = +2
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISH------- 58
D+PE C+A ++ P D +L+ ++ FR AS +D VW LP + I+
Sbjct: 716 DIPESCVALVLMYLDPPDICKLARLNRAFRDASFADFVWESKLPLNYEFIMGKALEDDTT 895
Query: 59 SPSLTNIPTKKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYW 118
S S K+D+Y L +P + D+ K I L++++G C +S+++L I DDRRYW
Sbjct: 896 SSSSGAELGKRDIYARLC-KPNLFDNGTKEIWLDKRTGGVCLAISSKALRITGIDDRRYW 1072
Query: 119 NWISMPDSR 127
N IS +SR
Sbjct: 1073NHISTEESR 1099
>BF520962 weakly similar to PIR|C96656|C96 unknown protein 43836-42510
[imported] - Arabidopsis thaliana, partial (58%)
Length = 681
Score = 73.2 bits (178), Expect = 3e-14
Identities = 43/127 (33%), Positives = 65/127 (50%), Gaps = 3/127 (2%)
Frame = +3
Query: 6 DLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPSLTNI 65
+LP+ CIA I+ P +L+ ++ F AS +D VW LPS+ II ++
Sbjct: 177 ELPQSCIAGIMEYMDPPQICKLASLNRAFHGASLADFVWESKLPSNYHVIIQKIFDGSSF 356
Query: 66 PT---KKDLYLALSDRPVIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWIS 122
P+ K+ +Y L D K + L+R GK C +SA+ L+I DDRRYWN +
Sbjct: 357 PSHLGKRGIYSRLCSLNTF-DEGTKKVWLDRSMGKVCLSVSAKGLSITGIDDRRYWNHVP 533
Query: 123 MPDSRLA 129
+SR +
Sbjct: 534 TEESRFS 554
>TC89219 weakly similar to PIR|C96656|C96656 unknown protein 43836-42510
[imported] - Arabidopsis thaliana, partial (46%)
Length = 764
Score = 46.2 bits (108), Expect(2) = 1e-12
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 2 TEIQDLPEGCIAAIVSRTTPLDAGRLSVFSKTFRSASDSDAVWNQFLPSDISSIISHSPS 61
T + D+PE CI++I+ P D +L+ ++ F AS +D VW LPS + +
Sbjct: 267 TGLGDIPESCISSILMHLDPHDICKLARVNRAFHRASSADFVWESKLPSCYKFLANKFLG 446
Query: 62 LTNIPT--KKDLYLAL 75
N+ T KKD+Y L
Sbjct: 447 EENLSTMSKKDVYTKL 494
Score = 41.6 bits (96), Expect(2) = 1e-12
Identities = 18/42 (42%), Positives = 28/42 (65%)
Frame = +1
Query: 87 KSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDSRL 128
K + L++ SG+ C +S++SL I DDRRYW +I +SR+
Sbjct: 526 KEVLLDKYSGQVCLFMSSKSLKITGIDDRRYWIYIPTEESRI 651
>TC80392 weakly similar to GP|15088626|gb|AAK84134.1 nictaba {Nicotiana
tabacum}, partial (29%)
Length = 1161
Score = 60.8 bits (146), Expect = 1e-10
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +2
Query: 83 DHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDSR 127
+H K+ +R K+ MLSARSL+I WGDD+RYWNWI+MPDSR
Sbjct: 53 EHQKR----KRDKKKESCMLSARSLSIAWGDDKRYWNWINMPDSR 175
>TC82238 weakly similar to GP|8570046|dbj|BAA96751.1 Similar to Arabidopsis
thaliana chromosome4 BAC clone T16H5; lectin like
protein (AL024486), partial (24%)
Length = 819
Score = 48.9 bits (115), Expect = 6e-07
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 80 VIIDHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPD 125
V + H K +E+ S C+ML AR+L+I W +D YW WI D
Sbjct: 369 VFLHHKTKKYWVEKNSKANCFMLYARALSITWAEDPNYWKWIQQKD 506
>CB891284 weakly similar to GP|22122920|gb unknown protein {Oryza sativa
(japonica cultivar-group)}, partial (37%)
Length = 588
Score = 46.6 bits (109), Expect = 3e-06
Identities = 22/45 (48%), Positives = 29/45 (63%)
Frame = +2
Query: 83 DHDKKSIQLERKSGKKCYMLSARSLAIVWGDDRRYWNWISMPDSR 127
D K I L+R SG+ C +S++S I DDRRYWN+IS +SR
Sbjct: 236 DGGTKEILLDRCSGQVCLFISSKSFKITGIDDRRYWNYISTEESR 370
>TC86966 similar to GP|6850934|emb|CAB71030.1 lectin-like protein {Cicer
arietinum}, partial (82%)
Length = 942
Score = 28.5 bits (62), Expect = 0.78
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 101 MLSARSLAIVWGDDRRYW 118
M+ + L I+WG+D RYW
Sbjct: 140 MIQPKGLNIIWGNDPRYW 193
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,095,882
Number of Sequences: 36976
Number of extensions: 48789
Number of successful extensions: 347
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of query: 130
length of database: 9,014,727
effective HSP length: 85
effective length of query: 45
effective length of database: 5,871,767
effective search space: 264229515
effective search space used: 264229515
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Medicago: description of AC146559.3