TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146551.11 + phase: 0 
         (339 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BG586265 weakly similar to PIR|T01797|T01 hypothetical protein A...   102  3e-22
TC93019 weakly similar to PIR|E84642|E84642 hypothetical protein...    58  6e-09
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl...    39  0.004
TC90982 weakly similar to GP|9758054|dbj|BAB08517.1 gene_id:MYC6...    35  0.054
TC82543 similar to GP|9294225|dbj|BAB02127.1 gene_id:K17E12.14~u...    35  0.054
TC81023 similar to GP|2190542|gb|AAB60906.1| F5I14.5 gene produc...    34  0.071
TC81969 similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich...    34  0.092
BQ144306 weakly similar to GP|23093252|gb| CG13731-PA {Drosophil...    34  0.092
TC78006 similar to GP|9758963|dbj|BAB09406.1 gb|AAF19567.1~gene_...    34  0.092
TC81648 similar to PIR|T00840|T00840 probable senescence-related...    33  0.12
AL373638 similar to PIR|S27776|S277 80K protein (allele C1B) - B...    33  0.16
BG647960 similar to GP|20260600|gb unknown protein {Arabidopsis ...    33  0.16
TC87240 similar to GP|19571126|dbj|BAB86550. putative 5-3 exorib...    33  0.16
BQ752151 similar to GP|1945155|emb MN1 {Homo sapiens}, partial (1%)    33  0.21
TC93224 weakly similar to PIR|E84642|E84642 hypothetical protein...    32  0.27
TC78134 similar to GP|9795609|gb|AAF98427.1| Unknown protein {Ar...    32  0.27
TC76418 similar to GP|16226228|gb|AAL16109.1 At1g20110/T20H2_10 ...    32  0.35
AJ499060 weakly similar to GP|13122418|dbj putative glycin-rich ...    32  0.35
TC88911 weakly similar to GP|13926280|gb|AAK49610.1 AT5g14920/F2...    32  0.35
TC79561 similar to GP|14194107|gb|AAK56248.1 At1g77260/T14N5_19 ...    32  0.35

>BG586265 weakly similar to PIR|T01797|T01 hypothetical protein A_TM021B04.9
           - Arabidopsis thaliana, partial (3%)
          Length = 808

 Score =  102 bits (253), Expect = 3e-22
 Identities = 49/109 (44%), Positives = 70/109 (63%)
 Frame = -3

Query: 12  KGKDKDGYVAWTMEETSELLYLLVDAINRGLRDANGSFSKQNVERAILPQLNAKTESHKT 71
           K K K  Y +W  +ET  L+ LLV+A+N   RD++GSFSK  VE  ILP+LN      K 
Sbjct: 377 KEKRKGDYNSWNHDETRILVQLLVEAVNNNWRDSSGSFSKLTVESKILPELNKDIYRAKD 198

Query: 72  YNHYLSRMKWFRNQYNKMSTFMRNNSGFGWDSVAKTYTATEEVWNNYLK 120
           + +Y SR K+ + Q+   +  +R +SGFGWD+  + +TA+ EVWN+YLK
Sbjct: 197 FKNYQSRHKYLKLQHQNCADLLRYSSGFGWDTSIQKFTASNEVWNDYLK 51


>TC93019 weakly similar to PIR|E84642|E84642 hypothetical protein At2g24960
           [imported] - Arabidopsis thaliana, partial (8%)
          Length = 718

 Score = 57.8 bits (138), Expect = 6e-09
 Identities = 36/134 (26%), Positives = 63/134 (46%)
 Frame = +2

Query: 22  WTMEETSELLYLLVDAINRGLRDANGSFSKQNVERAILPQLNAKTESHKTYNHYLSRMKW 81
           WT  +    L LL+  +++G  +  G    +     +  Q N+K       +   +R K 
Sbjct: 194 WTPSQDQYFLELLLSHVHKG--NKTGKVFTRLAWADMTEQFNSKFGFKYDVDVLKNRYKR 367

Query: 82  FRNQYNKMSTFMRNNSGFGWDSVAKTYTATEEVWNNYLKSHPSHKNLQGKSMIDYDYLKI 141
           F+ QY ++   M + +GF WD    T TA ++ W  Y+K+HP  +  + K    Y+ L I
Sbjct: 368 FKKQYYEIKA-MASQNGFQWDGRLNTITANDKTWEEYIKAHPDAQVFRKKLFPCYNDLCI 544

Query: 142 VVGGGVSSGNNSIA 155
           + G  V+ G  S++
Sbjct: 545 IYGHTVADGRYSLS 586


>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
           DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
          Length = 1338

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = -1

Query: 182 PNSDTFIAPDNYEPAYQPPSPNQPTPSPNQPTPSPHFSLNSEAPIEKRNRHKR 234
           P+S   +      P   PP PNQP+PSP+ P P P   L    P   ++RH+R
Sbjct: 279 PSSPPALVSPPPRPFLFPPPPNQPSPSPSPPPPPP---LPPPPPQPPQSRHQR 130



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 15/36 (41%), Positives = 20/36 (54%)
 Frame = -3

Query: 190 PDNYEPAYQPPSPNQPTPSPNQPTPSPHFSLNSEAP 225
           P + EP +QP  P  P P P+ P P+  F+L   AP
Sbjct: 538 PRHPEPTHQP-HPCLPPPIPSAPPPTRAFALPPSAP 434


>TC90982 weakly similar to GP|9758054|dbj|BAB08517.1
           gene_id:MYC6.16~pir||T13026~strong similarity to unknown
           protein {Arabidopsis thaliana}, partial (4%)
          Length = 510

 Score = 34.7 bits (78), Expect = 0.054
 Identities = 25/95 (26%), Positives = 42/95 (43%), Gaps = 4/95 (4%)
 Frame = +2

Query: 195 PAYQPPSPNQPTPSPNQPTPSPHFSLNSEAPIEKRNRHKRNRSEYERSSGVVGINNQGPA 254
           P Y  P P+  TP P   TP  HF+  S  P++    H  N+++   S  + G++   P 
Sbjct: 110 PTYTSPPPSLTTPPPKPQTPFSHFTTFSPFPLQ-FFAHFLNQNQ---SPSLAGVSPAPPR 277

Query: 255 MENL----SSSIGTIVVHFEKMSNMMEKREKDREL 285
              +    S  I  +++    M  ++   EK R+L
Sbjct: 278 TTTMNYQRS*KIRLMIIPMTMMLMLLPSSEKQRKL 382


>TC82543 similar to GP|9294225|dbj|BAB02127.1 gene_id:K17E12.14~unknown
           protein {Arabidopsis thaliana}, partial (20%)
          Length = 718

 Score = 34.7 bits (78), Expect = 0.054
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
 Frame = +2

Query: 148 SSGNNSIALDPEDTDATTFEQESESFGMEDFSYDPNSDTFIAPDNYEPAYQPPSPN---- 203
           SS +  I   PE++ A +    ++    +D   DP +   I     + A  PP PN    
Sbjct: 347 SSNSFGITSRPEESVANSNPSFTDGVATKDIHIDPFTSLSIRIFLPQSALSPPEPNSKSK 526

Query: 204 -QPTPSPNQPTPSPHFSLNSEAPIEKRNRHKRNRSEYERSSGVVGINNQG 252
             P P+PN    S +   NS  P  K    +   + +  S GV G+N  G
Sbjct: 527 PNPNPNPNYEGGSVNSRRNSYGPPYK---EEVKGNGFGGSYGVEGLNLMG 667


>TC81023 similar to GP|2190542|gb|AAB60906.1| F5I14.5 gene product
           {Arabidopsis thaliana}, partial (72%)
          Length = 839

 Score = 34.3 bits (77), Expect = 0.071
 Identities = 15/47 (31%), Positives = 24/47 (50%)
 Frame = -2

Query: 190 PDNYEPAYQPPSPNQPTPSPNQPTPSPHFSLNSEAPIEKRNRHKRNR 236
           P  + P Y  PS   P   P  P+PSP  S +S +P   +  H++++
Sbjct: 610 P*PFPPRYHAPSQQSPISPPPSPSPSPPASQSSSSPQHHQPSHQQSQ 470


>TC81969 similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
           glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
           partial (11%)
          Length = 556

 Score = 33.9 bits (76), Expect = 0.092
 Identities = 19/48 (39%), Positives = 25/48 (51%)
 Frame = -2

Query: 180 YDPNSDTFIAPDNYEPAYQPPSPNQPTPSPNQPTPSPHFSLNSEAPIE 227
           Y P S   + P +  P   PPSP  P PS + P+PSP+    S  P+E
Sbjct: 393 YSPVSSYSLNPSSSSPP--PPSPPPPPPSFSHPSPSPNLPF-SPPPLE 259


>BQ144306 weakly similar to GP|23093252|gb| CG13731-PA {Drosophila
           melanogaster}, partial (4%)
          Length = 1261

 Score = 33.9 bits (76), Expect = 0.092
 Identities = 18/63 (28%), Positives = 28/63 (43%)
 Frame = -1

Query: 182 PNSDTFIAPDNYEPAYQPPSPNQPTPSPNQPTPSPHFSLNSEAPIEKRNRHKRNRSEYER 241
           P   T   P   +   +PP P +  P P QPTP+P+    +  P      H  + ++ +R
Sbjct: 490 PPPHTLHLPSPRQHPPRPPPPTRQRPHPPQPTPTPNLRATTPLP------HPPSPTQKQR 329

Query: 242 SSG 244
            SG
Sbjct: 328 KSG 320



 Score = 29.6 bits (65), Expect = 1.7
 Identities = 20/65 (30%), Positives = 27/65 (40%), Gaps = 5/65 (7%)
 Frame = -2

Query: 182 PNSDTFIAPDNYEPAYQPPSPNQPTPSPNQP-----TPSPHFSLNSEAPIEKRNRHKRNR 236
           P   T   PDN  P    P  N PTP  N+P      P PH+  +   P   RN  +   
Sbjct: 483 PTLSTSPPPDNTHPDPHHPPDNDPTPR-NRPQLPISAPPPHYPTH---PRPHRNSERAGE 316

Query: 237 SEYER 241
           ++ E+
Sbjct: 315 NKKEK 301


>TC78006 similar to GP|9758963|dbj|BAB09406.1
            gb|AAF19567.1~gene_id:MYH9.6~similar to unknown protein
            {Arabidopsis thaliana}, partial (48%)
          Length = 1808

 Score = 33.9 bits (76), Expect = 0.092
 Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
 Frame = +3

Query: 117  NYLKSHPSHKNLQGKSMIDYDYLKIV---VGGGVSSGNNSIALDPEDTDATTFEQESESF 173
            N L+ HPS    +   ++   + +IV   V      G +++  D  D+          + 
Sbjct: 1053 NQLRKHPSSDVRRLVKLLVKKWKEIVDDWVKQNPQRGKSTLMADG-DSPLQKTTPNGHNH 1229

Query: 174  GMEDFSYDPN-----SDTFIAPDNYEPAYQPPSPNQPTPSPNQPTPSPHFSLNSEAPIEK 228
             + DF+Y PN     S +       EP  +P S  +  P P +P PSP  +  + AP  +
Sbjct: 1230 QIPDFAYSPNPHNGSSGSDRNTSEAEPKPKPKSVPRKDPPP-KPRPSPPVTAPTSAPQNR 1406

Query: 229  RNRHKRNRSEYER 241
            +   K +  + ER
Sbjct: 1407 QREQKESNFDAER 1445


>TC81648 similar to PIR|T00840|T00840 probable senescence-related protein
           [imported] - Arabidopsis thaliana, partial (36%)
          Length = 854

 Score = 33.5 bits (75), Expect = 0.12
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
 Frame = -2

Query: 147 VSSGNNSIAL----DPEDTDATTFEQESESFGMEDFSYDPNSDTFIAPDNY---EPAYQP 199
           V+S ++ I L    DPE          S +FG     Y  +  + I+  +     P+  P
Sbjct: 832 VTSPHHKIPLITCPDPEAIILAAVPLYSSTFGANVVQYAAHCPSIISSSSSMTPNPSAIP 653

Query: 200 PSPN-QPTPSPNQPTPSPHFSLN 221
           PSPN  P P P+ P+P P    N
Sbjct: 652 PSPNFHPKPLPSSPSPKPSAQKN 584


>AL373638 similar to PIR|S27776|S277 80K protein (allele C1B) - Babesia
           bovis, partial (3%)
          Length = 442

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 31/142 (21%), Positives = 52/142 (35%), Gaps = 10/142 (7%)
 Frame = +2

Query: 46  NGSFSKQNVERAILPQLNAKTESHKTYNHYLSRMKWFRNQYNKMSTFMRNNSGFGWDSVA 105
           N SF+K+   + I    + KT          +R    R QY  +   + +   F WD   
Sbjct: 14  NNSFNKK-AWKHICDGFHNKTGLKWDKEKLKNRHSVLRRQYAIVKPIL-DEGDFVWDEAT 187

Query: 106 KTYTATEEVWNNYLKSHPSHKNLQGKSMIDYDYLKIVVGGGVSSGNNSIALD-------- 157
               A +E+W  Y+K++P  + ++      +  L  +     ++G +  A          
Sbjct: 188 GAIIANDEIWAEYIKNNPDAETVKSGGCSIFKELCTIFSEAATNGQHEYAASDSEHTPRA 367

Query: 158 --PEDTDATTFEQESESFGMED 177
             PE       E  SES   ED
Sbjct: 368 PCPELLSTHQDESSSESEDEED 433


>BG647960 similar to GP|20260600|gb unknown protein {Arabidopsis thaliana},
           partial (39%)
          Length = 757

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 19/58 (32%), Positives = 28/58 (47%), Gaps = 4/58 (6%)
 Frame = -3

Query: 182 PNSDTFIAPDNYEPAYQPPSPNQPTPSPNQPTPSP----HFSLNSEAPIEKRNRHKRN 235
           P+   F  P ++    +PPSPN  T  P   TPSP    HF +    P+++    +RN
Sbjct: 344 PSPAIFPLPHHHR---RPPSPNSETAPP*TATPSPANP*HFRMRERNPMKRICEEERN 180


>TC87240 similar to GP|19571126|dbj|BAB86550. putative 5-3 exoribonuclease
            {Oryza sativa (japonica cultivar-group)}, partial (43%)
          Length = 2400

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 11/84 (13%)
 Frame = +1

Query: 189  APDNYEPAYQPPSP----NQPTPSPNQPTPSPHFS-------LNSEAPIEKRNRHKRNRS 237
            AP  Y P    P+     NQP   P  P+P  H S        N  +    RN H  N  
Sbjct: 1708 APPQYVPYAAAPTAHYGYNQPYSPPVIPSPHQHHSNSFPRGDQNPRSHHSDRNSHHVNGG 1887

Query: 238  EYERSSGVVGINNQGPAMENLSSS 261
                SSG    NNQ P   N   S
Sbjct: 1888 NARHSSG----NNQNPRFSNTQGS 1947


>BQ752151 similar to GP|1945155|emb MN1 {Homo sapiens}, partial (1%)
          Length = 650

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 15/38 (39%), Positives = 18/38 (46%), Gaps = 2/38 (5%)
 Frame = +3

Query: 190 PDNYEPAYQPP--SPNQPTPSPNQPTPSPHFSLNSEAP 225
           P  + P++ PP   P Q  P P Q  PSPH S     P
Sbjct: 315 PSAWPPSHPPPPKQPQQQAPPPQQAWPSPHVSAQKIPP 428


>TC93224 weakly similar to PIR|E84642|E84642 hypothetical protein At2g24960
           [imported] - Arabidopsis thaliana, partial (5%)
          Length = 779

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 19/81 (23%), Positives = 38/81 (46%)
 Frame = +3

Query: 256 ENLSSSIGTIVVHFEKMSNMMEKREKDRELKNNIWDIIKDIPNLDDKTRFKIAELMKSKA 315
           E +S ++  + V    ++N  +K  +D     N+  +++ IP+LDD       + ++ + 
Sbjct: 357 EGMSVALKHMAVAVTSLTNKTKK--EDNFSVGNVMKVLQAIPDLDDDLILDACDFLEDEK 530

Query: 316 NKDLFLKMSPEDRLSWIKFKL 336
              LFL +    R  W+  KL
Sbjct: 531 RARLFLALPANLRKKWLLRKL 593


>TC78134 similar to GP|9795609|gb|AAF98427.1| Unknown protein {Arabidopsis
           thaliana}, partial (46%)
          Length = 1133

 Score = 32.3 bits (72), Expect = 0.27
 Identities = 21/92 (22%), Positives = 40/92 (42%)
 Frame = +1

Query: 200 PSPNQPTPSPNQPTPSPHFSLNSEAPIEKRNRHKRNRSEYERSSGVVGINNQGPAMENLS 259
           P+  +PT  PNQ    P  + N   P  K    K+    YER +          +++N  
Sbjct: 391 PTTTKPTTKPNQQQDLPQQTRNFNIPPIKTAPKKQGFKLYERRN----------SLKNSV 540

Query: 260 SSIGTIVVHFEKMSNMMEKREKDRELKNNIWD 291
             + T++ +F + SN   ++++   L  ++ D
Sbjct: 541 LMLNTLMPNFSQNSNFSPRKQQQEILSPSLLD 636


>TC76418 similar to GP|16226228|gb|AAL16109.1 At1g20110/T20H2_10
           {Arabidopsis thaliana}, partial (54%)
          Length = 2020

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 22/81 (27%), Positives = 33/81 (40%)
 Frame = +3

Query: 147 VSSGNNSIALDPEDTDATTFEQESESFGMEDFSYDPNSDTFIAPDNYEPAYQPPSPNQPT 206
           V S N S    P ++    ++Q S+ +      Y P       P NY P    P+PN   
Sbjct: 222 VPSSNPSFNPPPFESSNPLYQQPSQPY------YPPYDQQHQTPLNYAP--PNPNPNLYN 377

Query: 207 PSPNQPTPSPHFSLNSEAPIE 227
            SP    P P +  + E P++
Sbjct: 378 SSPYSVPPIPSYETSYENPVK 440


>AJ499060 weakly similar to GP|13122418|dbj putative glycin-rich protein
           {Oryza sativa (japonica cultivar-group)}, partial (6%)
          Length = 463

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 179 SYDPNSDTFIAPDNYEPAYQPPSPNQPTPSPNQPTPSPHFSLNSEAPIEKR 229
           SYD +S +     N  P++ PP+P +    P  P+P P  SL+    IE+R
Sbjct: 225 SYDIHSLSLDNHHNKHPSHHPPTPRKAPIQPPSPSPIPSKSLD-HPHIERR 374


>TC88911 weakly similar to GP|13926280|gb|AAK49610.1 AT5g14920/F2G14_40
           {Arabidopsis thaliana}, partial (11%)
          Length = 1320

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 19/48 (39%), Positives = 27/48 (55%)
 Frame = +3

Query: 195 PAYQPPSPNQPTPSPNQPTPSPHFSLNSEAPIEKRNRHKRNRSEYERS 242
           PA  PPSP  PTP+ + P+ +P  S   +AP E    HK  R +++ S
Sbjct: 741 PAILPPSP-APTPAIDTPSSAPAPSPEDDAP-EPPPPHKHKRRKHKHS 878


>TC79561 similar to GP|14194107|gb|AAK56248.1 At1g77260/T14N5_19
           {Arabidopsis thaliana}, partial (33%)
          Length = 1092

 Score = 32.0 bits (71), Expect = 0.35
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +2

Query: 183 NSDTFIAPDNYEPAYQPPSPNQPTPSPNQPTPSP 216
           +S TF +P + E   Q   P  P P P QPTP P
Sbjct: 107 SSLTFFSPPSPEDHQQQQPPPPPPPPPLQPTPKP 208


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.311    0.129    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,496,304
Number of Sequences: 36976
Number of extensions: 168724
Number of successful extensions: 3725
Number of sequences better than 10.0: 195
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3224
length of query: 339
length of database: 9,014,727
effective HSP length: 97
effective length of query: 242
effective length of database: 5,428,055
effective search space: 1313589310
effective search space used: 1313589310
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)