TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146341.1 - phase: 0 /pseudo
         (1544 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE326051 similar to GP|2252843|gb A_IG005I10.24 gene product {Ar...   293  3e-88
CA920486 similar to GP|8096317|dbj EST AU082557(R0845) correspon...    33  0.66
AW693247 similar to GP|10177809|dbj gene_id:MKD15.6~unknown prot...    31  3.3
BG452199 weakly similar to GP|10178211|db TMV resistance protein...    31  3.3
BG586012 similar to GP|20260496|gb trehalose-6-phosphate phospha...    30  5.5
TC86727 similar to GP|4432859|gb|AAD20707.1| unknown protein {Ar...    30  9.5
TC79654 homologue to GP|17979243|gb|AAL49938.1 AT3g11830/F26K24_...    30  9.5

>BE326051 similar to GP|2252843|gb A_IG005I10.24 gene product {Arabidopsis
            thaliana}, partial (6%)
          Length = 504

 Score =  293 bits (751), Expect(2) = 3e-88
 Identities = 145/146 (99%), Positives = 145/146 (99%)
 Frame = +3

Query: 1360 SIEVHVHWFRLLIGNCRSLCEGLAVDLLGEPSISALSRMQRMLPLSLIFPPAYSIFAFVR 1419
            SIEVHVHWFRLLIGNCRSLCEGLAVDLLGEPSISALSRMQRMLPLSLIFPPAYSIFAFVR
Sbjct: 3    SIEVHVHWFRLLIGNCRSLCEGLAVDLLGEPSISALSRMQRMLPLSLIFPPAYSIFAFVR 182

Query: 1420 WRPFILNANVAVRDDMNQLYQSLTMAIADAIKHSPFRDVCFRDCQGLYDLMVADGSDAEF 1479
            WRPFILNANVAVRDDMNQLYQSLTMAIADAIKHSPFRDVCFRDCQGLYDLMVADGSDAEF
Sbjct: 183  WRPFILNANVAVRDDMNQLYQSLTMAIADAIKHSPFRDVCFRDCQGLYDLMVADGSDAEF 362

Query: 1480 AALLELNGSDMHLKSMAFVPLRSRLF 1505
            AALLELNGSDMHLKSMAFVPLRSR F
Sbjct: 363  AALLELNGSDMHLKSMAFVPLRSRAF 440



 Score = 52.0 bits (123), Expect(2) = 3e-88
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +1

Query: 1504 LFLDAMIDCKMPPSIFTKDDVNR 1526
            LFLDAMIDCKMPPSIFTKDDVNR
Sbjct: 436  LFLDAMIDCKMPPSIFTKDDVNR 504


>CA920486 similar to GP|8096317|dbj EST AU082557(R0845) corresponds to a
           region of the predicted gene.~Similar to Arabidopsis
           thaliana, partial (40%)
          Length = 747

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = -2

Query: 746 GCEECRRAKRQKLSEERSSSVPADDDTWWVKKGLKSTEPLKVDQPQKTTKQVTK--SRQK 803
           GCE  +  KR    +    S  A +D W   +G+K T PL+V++ Q+  +++ +  +   
Sbjct: 686 GCESEKVGKRNIFLQNAEGSGLAPNDCWLCYRGIK-TMPLRVEKQQENAQKIAQFLASHP 510

Query: 804 NVRKMSLAQL 813
            V+K++ A L
Sbjct: 509 RVKKVNYAGL 480


>AW693247 similar to GP|10177809|dbj gene_id:MKD15.6~unknown protein
           {Arabidopsis thaliana}, partial (4%)
          Length = 560

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 20/71 (28%), Positives = 32/71 (44%)
 Frame = +3

Query: 666 KDGTSTVSTDQWKTVQSTASSKSAKDGASMEELKETISVLLQLPNSLSNLNSTGCDESES 725
           ++ + T  TDQ   VQ    S+     ASM+E        + LPN     +  G  + ES
Sbjct: 228 EEASKTSFTDQVTQVQENVHSQIKTFSASMDE--------ILLPNDKMVNDPLGLSQQES 383

Query: 726 SVRKPTWPHYG 736
           ++ +P W  +G
Sbjct: 384 TLPRPKWA*FG 416


>BG452199 weakly similar to GP|10178211|db TMV resistance protein N
           {Arabidopsis thaliana}, partial (4%)
          Length = 666

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = +3

Query: 749 ECRRAKRQKLSEERSSSVPADD--DTWWVKKGLKSTEPLKVDQPQKTTKQVTKSRQKNVR 806
           E  R K  K  EERS      D  D    K G K+ E L +  P    K  +    K ++
Sbjct: 24  EIVREKSPKEPEERSRLWFNKDVIDVLSEKTGTKAVEGLALKLPTANGKCFSTKAFKEMK 203

Query: 807 KMSLAQLAASRIEG 820
           K+ L QLA+ ++EG
Sbjct: 204 KLRLLQLASVQLEG 245


>BG586012 similar to GP|20260496|gb trehalose-6-phosphate phosphatase
            {Arabidopsis thaliana}, partial (39%)
          Length = 730

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 22/83 (26%), Positives = 38/83 (45%)
 Frame = -2

Query: 1455 FRDVCFRDCQGLYDLMVADGSDAEFAALLELNGSDMHLKSMAFVPLRSRLFLDAMIDCKM 1514
            F+ +CF     L + + +DGS  E  ALL     D  +    F  L++   L+A    + 
Sbjct: 474  FKGLCFHTTSDLRNSITSDGSRRE*LALLSFGAEDTRIP*PLFPSLKT---LNASSSVRS 304

Query: 1515 PPSIFTKDDVNRVSGPSESKTKL 1537
             P I+     +++  PS+S  K+
Sbjct: 303  SP-IYIGSTSSQLLSPSDSSKKV 238


>TC86727 similar to GP|4432859|gb|AAD20707.1| unknown protein {Arabidopsis
           thaliana}, partial (27%)
          Length = 1852

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 29/127 (22%), Positives = 54/127 (41%), Gaps = 2/127 (1%)
 Frame = +2

Query: 643 RDDANANNAKLPTLK--RKRNPASSKDGTSTVSTDQWKTVQSTASSKSAKDGASMEELKE 700
           +D    NN+KLP+ +  R  +   +KDG      D+   V S+ S+ ++   +   +   
Sbjct: 422 KDLVKNNNSKLPSPRGLRMTSVRKNKDGK-----DEEAAVASSVSNGTSTFDSHPRQPVN 586

Query: 701 TISVLLQLPNSLSNLNSTGCDESESSVRKPTWPHYGKTEPVEGTPGCEECRRAKRQKLSE 760
             +V  +  +   +   T    +E+ + K T PH  K EP++  PG  E      +    
Sbjct: 587 NRAVNDKQTHLSKHSGKTDAASTEAPMEK-TRPHLIKKEPLDNLPGKAESSFPTSEDAKP 763

Query: 761 ERSSSVP 767
            R  ++P
Sbjct: 764 RRVGTMP 784


>TC79654 homologue to GP|17979243|gb|AAL49938.1 AT3g11830/F26K24_12
           {Arabidopsis thaliana}, partial (72%)
          Length = 1235

 Score = 29.6 bits (65), Expect = 9.5
 Identities = 23/72 (31%), Positives = 34/72 (46%), Gaps = 3/72 (4%)
 Frame = +1

Query: 374 CLAKVAKALDNSLVLGDLREAYKFLFEDFCDGTVSESWIVKVSPCLRLSLKWFGTVKTS- 432
           C+   AK + + L +GDL   Y    + FC G V+E  + +V+          GTV+TS 
Sbjct: 877 CVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLKRVAAATG------GTVQTSV 1038

Query: 433 --LIHSVFFLCE 442
             +I  V   CE
Sbjct: 1039NNIIDEVLGTCE 1074


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.134    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,820,658
Number of Sequences: 36976
Number of extensions: 651761
Number of successful extensions: 3395
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3394
length of query: 1544
length of database: 9,014,727
effective HSP length: 109
effective length of query: 1435
effective length of database: 4,984,343
effective search space: 7152532205
effective search space used: 7152532205
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)