TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146329.5 + phase: 0 
         (639 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC87373 homologue to PIR|A43350|A43350 formate--tetrahydrofolate...   766  0.0
BF641864                                                               30  2.9
TC77579 similar to SP|Q43314|DHE1_ARATH Glutamate dehydrogenase ...    29  4.9
TC84090 similar to PIR|D84555|D84555 probable protein kinase [im...    29  4.9
TC86604 similar to SP|Q9S7A0|DHE3_ARATH Probable glutamate dehyd...    28  8.3

>TC87373 homologue to PIR|A43350|A43350 formate--tetrahydrofolate ligase (EC
           6.3.4.3) - spinach, partial (67%)
          Length = 1591

 Score =  766 bits (1978), Expect(2) = 0.0
 Identities = 388/393 (98%), Positives = 389/393 (98%)
 Frame = +3

Query: 247 KITVGQGPDEKGMVRETAFDISVASEIMAVLALTTSLTDMRERLGKMVIGNSKSGDPVTA 306
           K+ VG GPDEKGMV ETAFDISVASEIMAVLALTTSLTDMRERLGKM IGNSKSGDPVTA
Sbjct: 117 KLLVGHGPDEKGMVPETAFDISVASEIMAVLALTTSLTDMRERLGKMGIGNSKSGDPVTA 296

Query: 307 DDLGIGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPG 366
           DDLGIGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPG
Sbjct: 297 DDLGIGGALTVLMKDAIHPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPG 476

Query: 367 GFVVTEAGFGADIGTEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPLDHA 426
           GFVVTEAGFGADIGTEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPLDHA
Sbjct: 477 GFVVTEAGFGADIGTEKFMNIKCRYSGLTPQCAIIVATIRALKMHGGGPAVVAGKPLDHA 656

Query: 427 YLTENVALVEAGCANLARHILNSKAYGANVIVAINKFSTDTDAELNAVKKAALDAGAYDA 486
           YLTENVALVEAGCANLARHILNSKAYGANVIVAINKFSTDTDAELNAVKKAALDAGAYDA
Sbjct: 657 YLTENVALVEAGCANLARHILNSKAYGANVIVAINKFSTDTDAELNAVKKAALDAGAYDA 836

Query: 487 VICSHHAHGGRGAVDLGIAVQKACENATQPLKFLYPLDIGIKEKIEAIAKSYGASGVEYS 546
           VICSHHAHGGRGAVDLGIAVQKACENATQPLKFLYPLDIGIKEKIEAIAKSYGASGVEYS
Sbjct: 837 VICSHHAHGGRGAVDLGIAVQKACENATQPLKFLYPLDIGIKEKIEAIAKSYGASGVEYS 1016

Query: 547 EQAEKKIELYTKQGFSGLPICMAKTQYSFSDNAAAKGAPTGFILPIRDVRASIGAGFIYP 606
           EQAEKKIELYTKQGFSGLPICMAKTQYSFSDNAAAKGAPTGFILPIRDVRASIGAGFIYP
Sbjct: 1017EQAEKKIELYTKQGFSGLPICMAKTQYSFSDNAAAKGAPTGFILPIRDVRASIGAGFIYP 1196

Query: 607 LVGTMSTMPGLPTRPCFYDIDLDTTTGQVIGLS 639
           LVGTMSTMPGLPTRPCFYDIDLDTTTGQVIGLS
Sbjct: 1197LVGTMSTMPGLPTRPCFYDIDLDTTTGQVIGLS 1295



 Score = 88.6 bits (218), Expect(2) = 0.0
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +2

Query: 209 TNPDDLTPEEVNKFARLDIDPDSITWRRVMDINDRFLRKIT 249
           TNPDDLTPEEVNKFARLDIDPDSITWRRVMDINDRFLRKIT
Sbjct: 2   TNPDDLTPEEVNKFARLDIDPDSITWRRVMDINDRFLRKIT 124


>BF641864 
          Length = 656

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +1

Query: 57  KVLLSALDELQESKDGYYVVVGGI---TPTPLGEGKSTTTVGL-CQALGAFLDKK 107
           K +   LD++ ESK+ + + +GG     P  + EG+ T +  L  +ALG   DKK
Sbjct: 421 KEITRRLDDIAESKNKFSLQMGGTLREIPXQVAEGRQTXSTPLESKALGRDXDKK 585


>TC77579 similar to SP|Q43314|DHE1_ARATH Glutamate dehydrogenase 1 (EC
           1.4.1.3) (GDH 1). [Mouse-ear cress] {Arabidopsis
           thaliana}, complete
          Length = 1530

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +2

Query: 409 KMHGGGPAVVAGKPLDHAYLTENVALVEAGCANLARHILNSKAYGANV 456
           K HG  PAVV GKP+D        A    G    A  +LN   YG ++
Sbjct: 584 KFHGYSPAVVTGKPIDLGGSLGRDAATGRGVMFAAEALLNE--YGKSI 721


>TC84090 similar to PIR|D84555|D84555 probable protein kinase [imported] -
           Arabidopsis thaliana, partial (19%)
          Length = 794

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -1

Query: 215 TPEEVNKFARLDIDPDSITWRRVMDINDRFLRKITVGQG 253
           TP + N F+ ++I   SITWR+ +++  +   K+ +  G
Sbjct: 305 TPMK*NIFSSINIHIKSITWRQTIEVRIKLFTKLRIRYG 189


>TC86604 similar to SP|Q9S7A0|DHE3_ARATH Probable glutamate dehydrogenase 3
           (EC 1.4.1.3) (GDH 3). [Mouse-ear cress] {Arabidopsis
           thaliana}, complete
          Length = 1566

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 11/16 (68%), Positives = 12/16 (74%)
 Frame = +1

Query: 409 KMHGGGPAVVAGKPLD 424
           K HG  PAVV GKP+D
Sbjct: 598 KFHGHSPAVVTGKPID 645


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.318    0.136    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,392,952
Number of Sequences: 36976
Number of extensions: 203342
Number of successful extensions: 931
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of query: 639
length of database: 9,014,727
effective HSP length: 102
effective length of query: 537
effective length of database: 5,243,175
effective search space: 2815584975
effective search space used: 2815584975
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)