BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145767.4 + phase: 0
(218 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88951 similar to GP|17979408|gb|AAL49846.1 putative ethylene r... 166 6e-42
TC83854 similar to GP|21554205|gb|AAM63284.1 ethylene response f... 159 8e-40
CB893400 similar to PIR|B86197|B861 hypothetical protein [import... 157 2e-39
TC88858 similar to GP|17979408|gb|AAL49846.1 putative ethylene r... 138 2e-33
AL367092 similar to GP|7939534|dbj| ethylene response DNA bindin... 126 6e-30
BQ136507 similar to GP|7939534|dbj| ethylene response DNA bindin... 105 2e-23
TC86775 similar to PIR|T02434|T02434 DNA binding protein EREBP-4... 104 3e-23
TC86332 similar to GP|7528276|gb|AAF63205.1| AP2-related transcr... 99 2e-21
TC80833 weakly similar to PIR|D86175|D86175 hypothetical protein... 96 1e-20
TC79845 similar to GP|21554069|gb|AAM63150.1 ethylene responsive... 94 4e-20
TC76792 similar to GP|3264767|gb|AAC24587.1| AP2 domain containi... 93 9e-20
TC88498 similar to GP|21304712|gb|AAM45475.1 ethylene-responsive... 92 2e-19
BF647376 similar to GP|7939533|dbj| Nicotiana EREBP-3-like prote... 92 2e-19
TC76841 homologue to GP|8809606|dbj|BAA97157.1 ethylene responsi... 91 3e-19
TC79268 similar to GP|21304712|gb|AAM45475.1 ethylene-responsive... 91 3e-19
TC90582 similar to GP|17381278|gb|AAL36057.1 AT4g34410/F10M10_18... 90 6e-19
TC76842 similar to GP|8809606|dbj|BAA97157.1 ethylene responsive... 90 6e-19
BE319790 similar to GP|17979408|gb| putative ethylene reponse fa... 90 8e-19
TC76795 similar to GP|18496063|emb|CAD21849. ethylene responsive... 89 1e-18
TC93662 similar to GP|10177219|dbj|BAB10294. contains similarity... 88 2e-18
>TC88951 similar to GP|17979408|gb|AAL49846.1 putative ethylene reponse
factor AP2 domain transcription factor {Arabidopsis
thaliana}, partial (40%)
Length = 1084
Score = 166 bits (420), Expect = 6e-42
Identities = 101/211 (47%), Positives = 129/211 (60%), Gaps = 16/211 (7%)
Frame = +2
Query: 13 NFFPQSSFGSQDSISLNPKNHNEFLPFNENDPEEMLLYGMITSSPQEQTLSKTSNEKTTK 72
NFF + S S SL+ N N+P E+ T+ Q ++TS+
Sbjct: 197 NFFSDVNNYSNSSGSLSSTESNSSGSVLSNEPLEV---SSNTTYKQVIKETQTSSPPPPP 367
Query: 73 SNKDKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGS 132
K+ +++RGVR RPWGKFAAEIRDSTR G+RVW+GTFD+AEAAALAYDQAAFS RGS
Sbjct: 368 PIKESKKRAFRGVRTRPWGKFAAEIRDSTRKGVRVWIGTFDTAEAAALAYDQAAFSTRGS 547
Query: 133 SATLNFSVEKVKESLRDMNYLLSN----DNECSPVIALKRKHSMKRKMDEKKKKH----- 183
A LNF E V+ESL++M SN D SPV+ALKRKHSM++K ++ K
Sbjct: 548 LAVLNFPEEVVRESLKEM---ASNSKPLDEGTSPVLALKRKHSMRKKSNKVSTKRIKSEY 718
Query: 184 -------DTDVRLDNLVVFEDLGADYLEQLL 207
+T++ NL VFEDLGA+YL+QLL
Sbjct: 719 HSDQIQIETNINSQNLFVFEDLGAEYLDQLL 811
>TC83854 similar to GP|21554205|gb|AAM63284.1 ethylene response factor ERF1
{Arabidopsis thaliana}, partial (47%)
Length = 598
Score = 159 bits (402), Expect = 8e-40
Identities = 96/172 (55%), Positives = 112/172 (64%), Gaps = 1/172 (0%)
Frame = +2
Query: 6 IPFSSKSNFFPQSSFGSQDSISLNPKNHNEFLPFNENDPEEMLLYGMITSSPQEQTLSKT 65
IP SS S+F QSS S N +LPFNENDPEEMLLYGMI + +
Sbjct: 74 IPNSSTSDFSSQSS-----SYEFN------YLPFNENDPEEMLLYGMINDANNLNKTTVK 220
Query: 66 SNEKTTKSNKDKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQA 125
E +++ N+ + KSYRGVRRRPWGKFAAEIRDSTR+G+RVWLGTFDSAEAAALAYDQA
Sbjct: 221 EEEVSSEENEPRKEKSYRGVRRRPWGKFAAEIRDSTRNGMRVWLGTFDSAEAAALAYDQA 400
Query: 126 AFSMRGSSATLNFSVEKVKESLRDMNYLLSNDNECSPV-IALKRKHSMKRKM 176
AFSMRGSSA L FS P+ +ALKRKHS++RK+
Sbjct: 401 AFSMRGSSAILKFSC*DC*RIA**YEL**WF*RWVFPLFVALKRKHSLRRKI 556
>CB893400 similar to PIR|B86197|B861 hypothetical protein [imported] -
Arabidopsis thaliana, partial (34%)
Length = 565
Score = 157 bits (398), Expect = 2e-39
Identities = 86/165 (52%), Positives = 114/165 (68%), Gaps = 11/165 (6%)
Frame = +2
Query: 58 QEQTLSKTSNEKTTKSNKDKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEA 117
+ Q +S S + S+ KSY+GVRRRPWGKFAAEIRDSTR G+RVW+GTFD+AEA
Sbjct: 5 ESQEISSNSTQLVQSSSP---KKSYKGVRRRPWGKFAAEIRDSTRKGVRVWIGTFDTAEA 175
Query: 118 AALAYDQAAFSMRGSSATLNFSVEKVKESLRDMNYLLSNDNE-CSPVIALKRKHSMKRKM 176
AALAYDQAA S RGS A LNF V+ESL+DM S + + SPV+ALKRKH++KRK
Sbjct: 176 AALAYDQAALSTRGSMAVLNFPEHVVRESLKDMENNKSWEKDGSSPVLALKRKHTLKRKS 355
Query: 177 D----------EKKKKHDTDVRLDNLVVFEDLGADYLEQLLMSSS 211
E++ +++ ++ N++V EDLG++YL+QLL S+
Sbjct: 356 KASNCKKTKRVEREMENNNNIVSQNVLVLEDLGSEYLDQLLSLST 490
>TC88858 similar to GP|17979408|gb|AAL49846.1 putative ethylene reponse
factor AP2 domain transcription factor {Arabidopsis
thaliana}, partial (28%)
Length = 658
Score = 138 bits (347), Expect = 2e-33
Identities = 77/162 (47%), Positives = 96/162 (58%)
Frame = +2
Query: 21 GSQDSISLNPKNHNEFLPFNENDPEEMLLYGMITSSPQEQTLSKTSNEKTTKSNKDKNNK 80
G D L H E EN P+ L + P + S+ TK K +
Sbjct: 170 GEMDLQELTYNGHVE----EENSPQPSLAPKTLNPKPPSCKSTNHSHVNPTKREK----R 325
Query: 81 SYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSATLNFSV 140
YRGVR RPWGKFAAEIRD+TR+G+RVW+GTFD+AEAAALAYDQAAF RG A LNFS
Sbjct: 326 LYRGVRTRPWGKFAAEIRDTTRNGVRVWIGTFDTAEAAALAYDQAAFLTRGYRAILNFSE 505
Query: 141 EKVKESLRDMNYLLSNDNECSPVIALKRKHSMKRKMDEKKKK 182
VKESL++MN+ + CSP++ LKR H ++ + KK
Sbjct: 506 HVVKESLQNMNFKTLLNQGCSPLLELKRMHVLRTRSKNPSKK 631
>AL367092 similar to GP|7939534|dbj| ethylene response DNA binding
protein-like {Arabidopsis thaliana}, partial (33%)
Length = 425
Score = 126 bits (317), Expect = 6e-30
Identities = 64/115 (55%), Positives = 82/115 (70%)
Frame = +2
Query: 38 PFNENDPEEMLLYGMITSSPQEQTLSKTSNEKTTKSNKDKNNKSYRGVRRRPWGKFAAEI 97
P +N+P++++L ++ S +NE + K SY GVR+RPWGK+AAEI
Sbjct: 107 PITKNEPKQLML----------KSSSSEANEVLQNNTKMDQKSSYIGVRKRPWGKYAAEI 256
Query: 98 RDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSATLNFSVEKVKESLRDMNY 152
RD+TR G RVWLGTFDSAE AALAYDQAAFSMRG A LNFSV++VKESL+++ Y
Sbjct: 257 RDTTRGGRRVWLGTFDSAEDAALAYDQAAFSMRGYDAVLNFSVQRVKESLQEIQY 421
>BQ136507 similar to GP|7939534|dbj| ethylene response DNA binding
protein-like {Arabidopsis thaliana}, partial (32%)
Length = 532
Score = 105 bits (261), Expect = 2e-23
Identities = 50/63 (79%), Positives = 58/63 (91%)
Frame = -3
Query: 90 WGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSATLNFSVEKVKESLRD 149
WGKFAAEIRD+TR G RVWLGTFDSAE AALAYDQAAFSMRG++A LNFSV++VKESL++
Sbjct: 419 WGKFAAEIRDTTRGGRRVWLGTFDSAEDAALAYDQAAFSMRGNNAVLNFSVQRVKESLQE 240
Query: 150 MNY 152
+ Y
Sbjct: 239 IQY 231
>TC86775 similar to PIR|T02434|T02434 DNA binding protein EREBP-4 - common
tobacco, partial (33%)
Length = 1230
Score = 104 bits (259), Expect = 3e-23
Identities = 60/132 (45%), Positives = 75/132 (56%)
Frame = +2
Query: 16 PQSSFGSQDSISLNPKNHNEFLPFNENDPEEMLLYGMITSSPQEQTLSKTSNEKTTKSNK 75
PQ++F S N N P + IT +Q + K+ N +N
Sbjct: 200 PQTTFSKPPRSSSNLSNRK---------PSLNITIPSITKPLPQQNIVKSEN-----TNT 337
Query: 76 DKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSAT 135
++NK YRGVRRR WGKFAAEIRD R G RVWLGTFD+A AA AYD+AAF MRGS A
Sbjct: 338 KEDNKHYRGVRRRTWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDKAAFQMRGSKAI 517
Query: 136 LNFSVEKVKESL 147
LNF ++ +S+
Sbjct: 518 LNFPLDVATDSV 553
>TC86332 similar to GP|7528276|gb|AAF63205.1| AP2-related transcription
factor {Mesembryanthemum crystallinum}, partial (49%)
Length = 1349
Score = 98.6 bits (244), Expect = 2e-21
Identities = 59/140 (42%), Positives = 72/140 (51%), Gaps = 38/140 (27%)
Frame = +1
Query: 37 LPFNENDPEEMLLYGMITSSPQ------------EQTLSKTSNEKTTKSNKDK------- 77
LP E+D E+M+LYG++ + E S E T K D
Sbjct: 292 LPLKEDDSEDMVLYGVLRDAVNVGWVPSLEVGSPESVSSVFPLEMTVKPEPDVMPVENVL 471
Query: 78 -------------------NNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAA 118
K YRGVR+RPWGKFAAEIRD ++G RVWLGTF++AE A
Sbjct: 472 PVASTAEQVVPEGPKAAPVKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDA 651
Query: 119 ALAYDQAAFSMRGSSATLNF 138
ALAYD+AA+ MRGS A LNF
Sbjct: 652 ALAYDRAAYRMRGSRALLNF 711
>TC80833 weakly similar to PIR|D86175|D86175 hypothetical protein [imported]
- Arabidopsis thaliana, partial (60%)
Length = 709
Score = 95.9 bits (237), Expect = 1e-20
Identities = 47/83 (56%), Positives = 53/83 (63%)
Frame = +1
Query: 59 EQTLSKTSNEKTTKSNKDKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAA 118
+ L S N + + YRG+RRRPWGKFAAEIRD TR G R+WLGTFD+AE A
Sbjct: 109 DHKLVSNSTNGNGNGNGNSDQIKYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQA 288
Query: 119 ALAYDQAAFSMRGSSATLNFSVE 141
A AYD AAF RG A LNF E
Sbjct: 289 ARAYDAAAFHFRGHRAILNFPNE 357
>TC79845 similar to GP|21554069|gb|AAM63150.1 ethylene responsive element
binding factor-like {Arabidopsis thaliana}, partial
(39%)
Length = 857
Score = 94.0 bits (232), Expect = 4e-20
Identities = 65/143 (45%), Positives = 76/143 (52%), Gaps = 14/143 (9%)
Frame = +1
Query: 13 NFFPQSSFGSQDSISLNPKNHNEFLPFNEN-DPEEMLLYGMITSSPQEQTLSKTSNEK-- 69
N P+ F S S ++ F F EN D + + TSS +E T SK ++
Sbjct: 133 NPLPEFDFSSYIS------ENSTFFTFLENYDLIADMEFFTHTSSSKETTPSKEIKDEVA 294
Query: 70 --TTKSNKDKNNKS---------YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAA 118
TT + K K YRGVRRRPWGKFAAEIRD +R G RVWLGTFD A
Sbjct: 295 IATTMVSSKKVKKEEECVDETRRYRGVRRRPWGKFAAEIRDPSRKGSRVWLGTFDCEIDA 474
Query: 119 ALAYDQAAFSMRGSSATLNFSVE 141
A AYD AAF MRG A LNF +E
Sbjct: 475 AKAYDSAAFRMRGQKAILNFPLE 543
>TC76792 similar to GP|3264767|gb|AAC24587.1| AP2 domain containing protein
{Prunus armeniaca}, partial (49%)
Length = 1729
Score = 92.8 bits (229), Expect = 9e-20
Identities = 56/149 (37%), Positives = 81/149 (53%), Gaps = 21/149 (14%)
Frame = +3
Query: 31 KNHNEFLPFNENDPEEMLLYGM-----------------ITSSPQEQTLSKTSNEKTTKS 73
K+ ++F + D +E LL G+ + S ++++ SN++ K
Sbjct: 324 KDDSDFDEDEDEDDDEGLLVGVKGFTFASNKNNKSSKSFVRGSSAAKSVALNSNQQAEKD 503
Query: 74 NKDKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSS 133
+K K YRG+R+RPWGK+AAEIRD R G+RVWLGTF++AE AA AYD A +RG+
Sbjct: 504 SKRKRKNQYRGIRQRPWGKWAAEIRD-PRKGVRVWLGTFNTAEEAARAYDAEARRIRGNK 680
Query: 134 ATLNF----SVEKVKESLRDMNYLLSNDN 158
A +NF V K ++ L NDN
Sbjct: 681 AKVNFPEEAPVASSKRLKKNPEMQLLNDN 767
>TC88498 similar to GP|21304712|gb|AAM45475.1 ethylene-responsive element
binding protein 1 {Glycine max}, partial (45%)
Length = 902
Score = 92.0 bits (227), Expect = 2e-19
Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Frame = +3
Query: 55 SSPQEQTLSKTSNEKTTKSNKDKNN-----KSYRGVRRRPWGKFAAEIRDSTRHGIRVWL 109
+S Q K+ NE T + N K Y+GVRRRPWGKFAAEIRD ++G RVWL
Sbjct: 165 TSYQPSPSPKSDNESDTIVEAREVNTPPIWKRYKGVRRRPWGKFAAEIRDPKKNGARVWL 344
Query: 110 GTFDSAEAAALAYDQAAFSMRGSSATLNF 138
GT+ + E AALAYD+AAF MRG A LNF
Sbjct: 345 GTYVTEEEAALAYDKAAFKMRGRKAKLNF 431
>BF647376 similar to GP|7939533|dbj| Nicotiana EREBP-3-like protein
{Arabidopsis thaliana}, partial (52%)
Length = 457
Score = 91.7 bits (226), Expect = 2e-19
Identities = 42/57 (73%), Positives = 46/57 (80%)
Frame = +2
Query: 82 YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSATLNF 138
YRG+RRRPWGKFAAEIRD TR G R+WLGTF++AE AA AYD AAF RG A LNF
Sbjct: 26 YRGIRRRPWGKFAAEIRDPTRKGSRIWLGTFETAEQAARAYDAAAFHFRGHKAILNF 196
>TC76841 homologue to GP|8809606|dbj|BAA97157.1 ethylene responsive element
binding factor 5 (ATERF5) {Arabidopsis thaliana},
partial (19%)
Length = 1173
Score = 91.3 bits (225), Expect = 3e-19
Identities = 43/60 (71%), Positives = 48/60 (79%)
Frame = +2
Query: 82 YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSATLNFSVE 141
YRGVR+RPWGKFAAEIRD + G RVWLGTF++A AA AYD AAF MRGS A LNF +E
Sbjct: 572 YRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFETAIEAAKAYDSAAFRMRGSKAILNFPLE 751
>TC79268 similar to GP|21304712|gb|AAM45475.1 ethylene-responsive element
binding protein 1 {Glycine max}, partial (53%)
Length = 884
Score = 90.9 bits (224), Expect = 3e-19
Identities = 42/59 (71%), Positives = 48/59 (81%)
Frame = +3
Query: 80 KSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSATLNF 138
K Y+GVRRRPWGKFAAEIRD ++G RVWLGT+ + E AALAYD+AAF MRG A LNF
Sbjct: 255 KRYKGVRRRPWGKFAAEIRDPKKNGARVWLGTYVTEEEAALAYDKAAFKMRGRKAKLNF 431
>TC90582 similar to GP|17381278|gb|AAL36057.1 AT4g34410/F10M10_180
{Arabidopsis thaliana}, partial (29%)
Length = 979
Score = 90.1 bits (222), Expect = 6e-19
Identities = 48/83 (57%), Positives = 57/83 (67%)
Frame = +2
Query: 68 EKTTKSNKDKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAF 127
EK K + + K YRGVR+RPWGK+AAEIRD R +RVWLGTF +AE AA AYD AA
Sbjct: 299 EKKQKQKQKRAKKKYRGVRQRPWGKWAAEIRDP-RRAVRVWLGTFTTAEEAARAYDNAAI 475
Query: 128 SMRGSSATLNFSVEKVKESLRDM 150
RG A LNF V V ESL+++
Sbjct: 476 EFRGPRAKLNFPV--VDESLKNV 538
>TC76842 similar to GP|8809606|dbj|BAA97157.1 ethylene responsive element
binding factor 5 (ATERF5) {Arabidopsis thaliana},
partial (27%)
Length = 1135
Score = 90.1 bits (222), Expect = 6e-19
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = +1
Query: 82 YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSSATLNFSVE 141
YRGVR+RPWGKFAAEIRD + G RVWLGTF++A AA AYD AAF +RGS A LNF +E
Sbjct: 577 YRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFETAIEAAKAYDSAAFRLRGSKAILNFPLE 756
>BE319790 similar to GP|17979408|gb| putative ethylene reponse factor AP2
domain transcription factor {Arabidopsis thaliana},
partial (21%)
Length = 548
Score = 89.7 bits (221), Expect = 8e-19
Identities = 59/143 (41%), Positives = 76/143 (52%), Gaps = 11/143 (7%)
Frame = +1
Query: 8 FSSKSNFFPQSSFGSQDSISLNPKNH--NEFLPFNENDPEEMLLYGMITSSPQEQT---- 61
F + S+F SF D N N+ N P N D + TS T
Sbjct: 106 FENSSSFL--ESFSLDDFFFFNEDNNINNNTFPMNFTDQNTQIFKESSTSDSNSNTSNSQ 279
Query: 62 LSKTSNEKTTKSNKDKNNKS----YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEA 117
+S S E ++ S + + S YRGVRRRPWGKFAAEIRDSTR+G+RVW+GTFD+AEA
Sbjct: 280 VSTESQEVSSNSTQLVQSSSPKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEA 459
Query: 118 AALAYDQAAF-SMRGSSATLNFS 139
AA + ++F + R A FS
Sbjct: 460 AAFSL*SSSFINKRIKLAVFEFS 528
Score = 28.1 bits (61), Expect = 2.7
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 120 LAYDQAAFSMRGSS-ATLNFSVEKVKE 145
LAYDQAA S RGS+ LNF V+E
Sbjct: 467 LAYDQAALSTRGSNWQCLNFPEHVVRE 547
>TC76795 similar to GP|18496063|emb|CAD21849. ethylene responsive element
binding protein {Fagus sylvatica}, partial (32%)
Length = 966
Score = 89.4 bits (220), Expect = 1e-18
Identities = 45/89 (50%), Positives = 58/89 (64%)
Frame = +3
Query: 53 ITSSPQEQTLSKTSNEKTTKSNKDKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTF 112
+ S + ++ SNE+ K K K YRG+R+RPWGK+AAEIRD R G+RVWLGTF
Sbjct: 279 VRGSSAAKVVASKSNEQGEKELKRKRKNQYRGIRQRPWGKWAAEIRD-PRKGVRVWLGTF 455
Query: 113 DSAEAAALAYDQAAFSMRGSSATLNFSVE 141
++AE AA AYD A +RG A +NF E
Sbjct: 456 NTAEEAARAYDAEARRIRGKKAKVNFPEE 542
>TC93662 similar to GP|10177219|dbj|BAB10294. contains similarity to AP2
domain transcription factor~gene_id:MPF21.9 {Arabidopsis
thaliana}, partial (31%)
Length = 555
Score = 88.2 bits (217), Expect = 2e-18
Identities = 45/85 (52%), Positives = 56/85 (64%)
Frame = +3
Query: 54 TSSPQEQTLSKTSNEKTTKSNKDKNNKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFD 113
TSS T S + T + + + YRGVR+RPWGK+AAEIRD + RVWLGTF+
Sbjct: 174 TSSTSNTTQSSEAASTTNEEETGERRRRYRGVRQRPWGKWAAEIRDPHK-AARVWLGTFE 350
Query: 114 SAEAAALAYDQAAFSMRGSSATLNF 138
+AEAAA AYD+AA RG+ A LNF
Sbjct: 351 TAEAAARAYDEAALRFRGNRAKLNF 425
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.313 0.128 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,121,615
Number of Sequences: 36976
Number of extensions: 74637
Number of successful extensions: 589
Number of sequences better than 10.0: 130
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of query: 218
length of database: 9,014,727
effective HSP length: 92
effective length of query: 126
effective length of database: 5,612,935
effective search space: 707229810
effective search space used: 707229810
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Medicago: description of AC145767.4