BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145470.4 + phase: 0
(457 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88256 similar to GP|21427471|gb|AAM53248.1 actin-related prote... 399 e-112
TC91391 weakly similar to GP|21427473|gb|AAM53249.1 actin-relate... 347 e-101
TC84731 similar to GP|21427471|gb|AAM53248.1 actin-related prote... 301 5e-82
BQ255364 weakly similar to GP|21427471|gb actin-related protein ... 237 6e-63
TC84693 similar to GP|21427473|gb|AAM53249.1 actin-related prote... 237 6e-63
TC85697 homologue to SP|P53496|ACTB_ARATH Actin 11. [Mouse-ear c... 126 2e-29
TC85698 homologue to GP|7960247|gb|AAF71265.1| actin-like protei... 125 3e-29
TC86577 PIR|T51183|T51183 actin isoform B [imported] - Mimosa pu... 125 3e-29
TC89940 homologue to PIR|T51175|T51175 actin [imported] - upland... 122 4e-28
TC86486 PIR|T51179|T51179 actin [imported] - garden pea, complete 121 6e-28
BF641907 similar to GP|22136342|gb actin -like protein {Arabidop... 57 2e-08
AL386036 homologue to GP|12697248|emb actin {Mortierella polycep... 46 3e-05
BF521287 SP|Q27250|ACT4 Actin cytoplasmic A4 (Actin A3B) (Actin... 45 8e-05
AL369487 similar to GP|12321978|gb actin-like protein; 86009-894... 44 2e-04
AW257228 GP|17342711|gb 1-aminocyclopropanecarboxylic acid oxida... 42 6e-04
TC88634 weakly similar to GP|9758726|dbj|BAB09164.1 gene_id:MFC1... 38 0.009
TC80267 similar to GP|6692128|gb|AAF24593.1| T19E23.14 {Arabidop... 37 0.016
TC82343 similar to GP|10177628|dbj|BAB10775. gb|AAF30317.1~gene_... 37 0.021
TC77818 similar to GP|21644661|dbj|BAC01219. putative tubby prot... 36 0.027
TC90351 similar to GP|13605503|gb|AAK32745.1 AT5g44670/K15C23_12... 36 0.035
>TC88256 similar to GP|21427471|gb|AAM53248.1 actin-related protein 8B
{Arabidopsis thaliana}, partial (45%)
Length = 913
Score = 399 bits (1026), Expect = e-112
Identities = 198/199 (99%), Positives = 199/199 (99%)
Frame = +3
Query: 254 SGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNNLYFESLYTVR 313
SGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNNLYFESLYTVR
Sbjct: 3 SGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNNLYFESLYTVR 182
Query: 314 TLKEKLCYVAYDYEAELSKDTHASFEAAEGKFTLSKERFQTGEILFQPRLAGVRAMSLHH 373
TLKEKLCYVAYDYEAELSKDTHASFEAAEGKFTLSKERFQTGEILFQPRLAGVRAMSLHH
Sbjct: 183 TLKEKLCYVAYDYEAELSKDTHASFEAAEGKFTLSKERFQTGEILFQPRLAGVRAMSLHH 362
Query: 374 AIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLEKELHSLLPPYMSNGIRVIP 433
AIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLEKELHSLLPPYMSNGIRVIP
Sbjct: 363 AIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLEKELHSLLPPYMSNGIRVIP 542
Query: 434 PPHGADTAWFGAKLIGSVS 452
PPHGADTAWFGAKLIGS+S
Sbjct: 543 PPHGADTAWFGAKLIGSLS 599
>TC91391 weakly similar to GP|21427473|gb|AAM53249.1 actin-related protein
8A {Arabidopsis thaliana}, partial (17%)
Length = 666
Score = 347 bits (889), Expect(2) = e-101
Identities = 164/164 (100%), Positives = 164/164 (100%)
Frame = +2
Query: 1 MLLRKLCDSASSSIKRSTNTTNSSSSSRSHQHHHHHAPSPLGLFDSLPPDILLKITRLLG 60
MLLRKLCDSASSSIKRSTNTTNSSSSSRSHQHHHHHAPSPLGLFDSLPPDILLKITRLLG
Sbjct: 74 MLLRKLCDSASSSIKRSTNTTNSSSSSRSHQHHHHHAPSPLGLFDSLPPDILLKITRLLG 253
Query: 61 PKHAAKLCLVCKSWRSLVSDNELWAHFLQTHQPIHFHSILFSETNLTSGYPLPIFDTQTT 120
PKHAAKLCLVCKSWRSLVSDNELWAHFLQTHQPIHFHSILFSETNLTSGYPLPIFDTQTT
Sbjct: 254 PKHAAKLCLVCKSWRSLVSDNELWAHFLQTHQPIHFHSILFSETNLTSGYPLPIFDTQTT 433
Query: 121 PHVSFKHVFGHREQLPPAIIIDGGSGYCKFGWSKEDRPLGRVAT 164
PHVSFKHVFGHREQLPPAIIIDGGSGYCKFGWSKEDRPLGRVAT
Sbjct: 434 PHVSFKHVFGHREQLPPAIIIDGGSGYCKFGWSKEDRPLGRVAT 565
Score = 40.4 bits (93), Expect(2) = e-101
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +3
Query: 165 FLEFGNVETPIYTRLRHFFATVYGRMKVKPSSQ 197
FLEFGNVETPIYT+ FF + + +PSSQ
Sbjct: 567 FLEFGNVETPIYTKASTFFCNCLWQDEGEPSSQ 665
>TC84731 similar to GP|21427471|gb|AAM53248.1 actin-related protein 8B
{Arabidopsis thaliana}, partial (40%)
Length = 582
Score = 301 bits (770), Expect = 5e-82
Identities = 154/193 (79%), Positives = 173/193 (88%), Gaps = 2/193 (1%)
Frame = +1
Query: 216 ASRQQLKEAICAALFDMNVPAVCALNQATLALYAANQTSGIAVNIGFQVTSVVPILNGKV 275
ASRQQLKEAI A+LFD+NVPAVCA+NQATLALYAA +TSGIAVNIGFQVTS+VPI NGKV
Sbjct: 4 ASRQQLKEAIYASLFDLNVPAVCAVNQATLALYAAKRTSGIAVNIGFQVTSIVPIFNGKV 183
Query: 276 MRKVGVEVVGLGALKLTGFLREKMQQNNLYFESLYTVRTLKEKLCYVAYDYEAELSKD-T 334
MRKVGV+VVGLGALK+TGFL+EKMQQNNL F+SLYTVR LKE LCYVA DYEAEL K+ T
Sbjct: 184 MRKVGVKVVGLGALKVTGFLKEKMQQNNLNFQSLYTVRALKENLCYVALDYEAELLKENT 363
Query: 335 HASFEA-AEGKFTLSKERFQTGEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDW 393
ASF+A +G FTLSKERFQT EILF+P LAGV+AM LHHAIA CM++CHSA L G +DW
Sbjct: 364 QASFQATGDGLFTLSKERFQTAEILFKPHLAGVQAMGLHHAIARCMENCHSAGLPGDNDW 543
Query: 394 FKTVVLSGGSACL 406
+KTVVLSGG+ACL
Sbjct: 544 YKTVVLSGGTACL 582
>BQ255364 weakly similar to GP|21427471|gb actin-related protein 8B
{Arabidopsis thaliana}, partial (35%)
Length = 654
Score = 237 bits (605), Expect = 6e-63
Identities = 117/156 (75%), Positives = 134/156 (85%), Gaps = 2/156 (1%)
Frame = +1
Query: 299 MQQNNLYFESLYTVRTLKEKLCYVAYDYEAELSKD-THASFEAA-EGKFTLSKERFQTGE 356
+Q +L F+SLYTVR LKE LCYVA DYEAEL K+ T ASF+A +G FTLSKERFQT E
Sbjct: 52 LQ*QSLNFQSLYTVRALKENLCYVALDYEAELLKENTQASFQATGDGLFTLSKERFQTAE 231
Query: 357 ILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLEKE 416
ILF+P LAGV+AM LHHAIA CM++CHSA L G +DW+KTVVLSGG+ACLPGLAERLEKE
Sbjct: 232 ILFKPHLAGVQAMGLHHAIARCMENCHSAGLPGDNDWYKTVVLSGGTACLPGLAERLEKE 411
Query: 417 LHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGSVS 452
LH LLPPYMSNGIRVIPPP+G DT WFGAK+IG++S
Sbjct: 412 LHGLLPPYMSNGIRVIPPPYGVDTPWFGAKMIGNLS 519
>TC84693 similar to GP|21427473|gb|AAM53249.1 actin-related protein 8A
{Arabidopsis thaliana}, partial (36%)
Length = 644
Score = 237 bits (605), Expect = 6e-63
Identities = 116/192 (60%), Positives = 141/192 (73%), Gaps = 2/192 (1%)
Frame = +2
Query: 22 NSSSSSRSHQHHHHHAP-SPLGLFDSLPPDILLKITRLLGPKHAAKLCLVCKSWRSLVSD 80
N +SS Q P +G D LP DIL++I RLLGPK AKL ++CKS + VSD
Sbjct: 74 NPTSSDEQQQQQVLPLPYGDMGELDQLPSDILIQILRLLGPKEVAKLSVICKSLKFSVSD 253
Query: 81 NELWAHFLQTHQPI-HFHSILFSETNLTSGYPLPIFDTQTTPHVSFKHVFGHREQLPPAI 139
N LW HFLQTHQ + S+ F+ETNL SGYPLP F + P +SFKH++G R Q+P AI
Sbjct: 254 NRLWLHFLQTHQSDPSWDSVFFAETNLISGYPLPSFGQR--PQLSFKHIYGQRAQVPGAI 427
Query: 140 IIDGGSGYCKFGWSKEDRPLGRVATFLEFGNVETPIYTRLRHFFATVYGRMKVKPSSQVV 199
IIDGGSGYCKFGWSK P GR ATFLEFGN+E+P+YTRLRHFFAT+Y RM+VKP +Q +
Sbjct: 428 IIDGGSGYCKFGWSKYACPSGRSATFLEFGNIESPMYTRLRHFFATIYNRMQVKPKNQPI 607
Query: 200 VVSLPLCHYDDT 211
+VS+P+CHYDDT
Sbjct: 608 IVSIPICHYDDT 643
>TC85697 homologue to SP|P53496|ACTB_ARATH Actin 11. [Mouse-ear cress]
{Arabidopsis thaliana}, complete
Length = 1528
Score = 126 bits (316), Expect = 2e-29
Identities = 87/278 (31%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Frame = +3
Query: 185 TVYGRMKVKPSSQ-VVVVSLPLCHYDDTESAKASRQQLKEAICAALFDMNVPAVCALNQA 243
T Y ++V P V++ PL + KA+R+++ + + N PA+ QA
Sbjct: 372 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 521
Query: 244 TLALYAANQTSGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNN 303
L+LYA+ +T+GI ++ G V+ VPI G + + + L LT FL + + +
Sbjct: 522 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL-DLAGRDLTDFLMKILTERG 698
Query: 304 LYFESLYT---VRTLKEKLCYVAYDYEAEL-----SKDTHASFEAAEGK-FTLSKERFQT 354
F + VR +KEKL Y+A DYE EL S S+E +G+ T+ ERF+
Sbjct: 699 YSFTTSAEREIVRDVKEKLSYIALDYEQELETARTSSSVEKSYELPDGQVITIGDERFRC 878
Query: 355 GEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLE 414
E+LFQP + G+ A +H + C ++ D + +VLSGG+ PG+A+R+
Sbjct: 879 PEVLFQPSMIGMEAAGIHETTYNSIMKC---DVDIRKDLYGNIVLSGGTTMFPGIADRMS 1049
Query: 415 KELHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGSVS 452
KE+ +L P M I+V+ PP + W G ++ S+S
Sbjct: 1050KEISALAPSSMK--IKVVAPPERKYSVWIGGSILASLS 1157
>TC85698 homologue to GP|7960247|gb|AAF71265.1| actin-like protein
{Phalaenopsis sp. 'True Lady'}, partial (80%)
Length = 1459
Score = 125 bits (315), Expect = 3e-29
Identities = 88/278 (31%), Positives = 142/278 (50%), Gaps = 10/278 (3%)
Frame = +1
Query: 185 TVYGRMKVKPSSQ-VVVVSLPLCHYDDTESAKASRQQLKEAICAALFDMNVPAVCALNQA 243
T Y ++V P V++ PL + KA+R+++ + + NVPA+ QA
Sbjct: 55 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NVPAMYVAIQA 204
Query: 244 TLALYAANQTSGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNN 303
L+LYA+ +T+GI ++ G V+ VPI G + + + L LT +L + + +
Sbjct: 205 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTEYLVKILTERG 381
Query: 304 LYFES---LYTVRTLKEKLCYVAYDYEAEL-----SKDTHASFEAAEGK-FTLSKERFQT 354
F + VR +KEKL YVA D+E E+ S S+E +G+ T+ ERF+
Sbjct: 382 YSFSTSAEKEIVRDVKEKLAYVALDFEQEMETTKSSSAVEKSYELPDGQVITIGSERFRC 561
Query: 355 GEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLE 414
E+LFQP L G+ A +H + C ++ D + +VLSGGS PG+A+R+
Sbjct: 562 PEVLFQPSLIGMEATGIHETTYNSIMKC---DVDIRKDLYGNIVLSGGSTMFPGIADRMS 732
Query: 415 KELHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGSVS 452
KE+ +L P M I+V+ PP + W G ++ S+S
Sbjct: 733 KEISALAPSSMK--IKVVAPPERKYSVWIGGSILASLS 840
>TC86577 PIR|T51183|T51183 actin isoform B [imported] - Mimosa pudica,
complete
Length = 1590
Score = 125 bits (314), Expect = 3e-29
Identities = 88/278 (31%), Positives = 141/278 (50%), Gaps = 10/278 (3%)
Frame = +3
Query: 185 TVYGRMKVKPSSQ-VVVVSLPLCHYDDTESAKASRQQLKEAICAALFDMNVPAVCALNQA 243
T Y ++V P V++ PL + KA+R+++ + + NVPA+ QA
Sbjct: 372 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NVPAMYVAIQA 521
Query: 244 TLALYAANQTSGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNN 303
L+LYA+ +T+GI ++ G V+ VPI G + + + L LT L + + +
Sbjct: 522 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDSLMKILTERG 698
Query: 304 LYFES---LYTVRTLKEKLCYVAYDYEAEL-----SKDTHASFEAAEGK-FTLSKERFQT 354
F + VR +KEKL YVA DYE EL S ++E +G+ T+ ERF+
Sbjct: 699 YMFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRC 878
Query: 355 GEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLE 414
E+LFQP + G+ A +H + C ++ D + +VLSGGS PG+A+R+
Sbjct: 879 PEVLFQPSMIGMEAAGIHETTYNSIMKC---DVDIRKDLYGNIVLSGGSTMFPGIADRMS 1049
Query: 415 KELHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGSVS 452
KE+ +L P M I+V+ PP + W G ++ S+S
Sbjct: 1050KEITALAPSSMK--IKVVAPPERKYSVWIGGSILASLS 1157
>TC89940 homologue to PIR|T51175|T51175 actin [imported] - upland cotton,
complete
Length = 1429
Score = 122 bits (305), Expect = 4e-28
Identities = 86/278 (30%), Positives = 140/278 (49%), Gaps = 10/278 (3%)
Frame = +1
Query: 185 TVYGRMKVKPSSQ-VVVVSLPLCHYDDTESAKASRQQLKEAICAALFDMNVPAVCALNQA 243
T Y ++V P V++ PL + KA+R+++ + + N PA+ QA
Sbjct: 319 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NAPAMYVAIQA 468
Query: 244 TLALYAANQTSGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNN 303
L+LYA+ +T+GI ++ G V+ VPI G + + + L LT L + + +
Sbjct: 469 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERG 645
Query: 304 LYFESL---YTVRTLKEKLCYVAYDYEAEL-----SKDTHASFEAAEGK-FTLSKERFQT 354
F + VR +KEKL Y+A DYE EL S S+E +G+ T+ ERF+
Sbjct: 646 YSFTTTAEREIVRDVKEKLSYIALDYEQELETSKTSSAVEKSYELPDGQVITIGAERFRC 825
Query: 355 GEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLE 414
E+LFQP + G+ A +H + C ++ D + +VLSGG+ PG+A+R+
Sbjct: 826 PEVLFQPSMIGMEAPGIHETTYNSIMKC---DVDIRKDLYGNIVLSGGTTMFPGIADRMS 996
Query: 415 KELHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGSVS 452
KE+ +L P M I+V+ PP + W G ++ S+S
Sbjct: 997 KEITALAPSSMK--IKVVAPPERKYSVWIGGSILASLS 1104
>TC86486 PIR|T51179|T51179 actin [imported] - garden pea, complete
Length = 1536
Score = 121 bits (303), Expect = 6e-28
Identities = 85/278 (30%), Positives = 140/278 (49%), Gaps = 10/278 (3%)
Frame = +2
Query: 185 TVYGRMKVKPSSQ-VVVVSLPLCHYDDTESAKASRQQLKEAICAALFDMNVPAVCALNQA 243
T Y ++V P V++ PL + KA+R+++ + + N PA+ QA
Sbjct: 341 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 490
Query: 244 TLALYAANQTSGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNN 303
L+LYA+ +T+GI ++ G V+ VPI G + + + L LT L + + +
Sbjct: 491 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL-DLAGRDLTDALMKILTERG 667
Query: 304 LYFESLYT---VRTLKEKLCYVAYDYEAEL-----SKDTHASFEAAEGK-FTLSKERFQT 354
F + VR +KEKL Y+A DYE EL S ++E +G+ T+ ERF+
Sbjct: 668 YTFTTSAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKTYELPDGQVITIGAERFRC 847
Query: 355 GEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLAERLE 414
E+LFQP + G+ + +H + C ++ D + +VLSGGS PG+A+R+
Sbjct: 848 PEVLFQPSMIGMESPGIHETTFNSIMKC---DVDIRKDLYGNIVLSGGSTMFPGIADRMS 1018
Query: 415 KELHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGSVS 452
KE+ +L P M I+V+ PP + W G ++ S+S
Sbjct: 1019KEITALAPSSMK--IKVVAPPERKYSVWIGGSILASLS 1126
>BF641907 similar to GP|22136342|gb actin -like protein {Arabidopsis
thaliana}, partial (53%)
Length = 621
Score = 56.6 bits (135), Expect = 2e-08
Identities = 49/171 (28%), Positives = 78/171 (44%), Gaps = 8/171 (4%)
Frame = +2
Query: 204 PLCHYDDTESAKASRQQLKEAICAALFDMNVPAVCALNQATLALYAANQTSGIAVNIGFQ 263
PLC + KA+++QL + + N+ A QA L+LYA + SG V+IG
Sbjct: 80 PLC------TPKANKEQLVQLMFETF---NISGFYASEQAVLSLYAVGRISGCTVDIGHG 232
Query: 264 VTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNN-LYFESLYTVRTLKEKLCYV 322
+ P++ G V + G LT FL +++ ++N L S+ V +K++
Sbjct: 233 KIDIAPVIEGAV-NHIASRRFEFGGTDLTNFLAQELGKSNPLVNISISDVEKIKQQYSCC 409
Query: 323 AYD------YEAELSKDTHASFEAAEGK-FTLSKERFQTGEILFQPRLAGV 366
A D E +TH +G+ T+ ER+ GE LF P L G+
Sbjct: 410 AEDDLXYQKTEDSCPVETHT---LPDGQVITIGXERYTVGEALFXPSLLGL 553
>AL386036 homologue to GP|12697248|emb actin {Mortierella polycephala},
partial (22%)
Length = 185
Score = 45.8 bits (107), Expect = 3e-05
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Frame = +3
Query: 312 VRTLKEKLCYVAYDYEAEL-----SKDTHASFEAAEGK-FTLSKERFQTGEILFQP 361
VR +KEKLC+VA D+E E+ S S+E +G+ T+ ERF+ E LFQP
Sbjct: 9 VRDIKEKLCFVALDFEQEMQTAAQSSALEKSYELPDGQVITIGNERFRAPEALFQP 176
>BF521287 SP|Q27250|ACT4 Actin cytoplasmic A4 (Actin A3B) (Actin 1D).
[African malaria mosquito] {Anopheles gambiae}, partial
(22%)
Length = 251
Score = 44.7 bits (104), Expect = 8e-05
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +3
Query: 245 LALYAANQTSGIAVNIGFQVTSVVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQQNNL 304
L+LYA+ +T+GI ++ G V+ VPI G + + + L LT +L + + +
Sbjct: 3 LSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGY 179
Query: 305 YFESL---YTVRTLKEKLCYVAYD 325
F + VR +KEKLCYVA D
Sbjct: 180 SFTTTAEREIVRDIKEKLCYVALD 251
>AL369487 similar to GP|12321978|gb actin-like protein; 86009-89485
{Arabidopsis thaliana}, partial (14%)
Length = 483
Score = 43.5 bits (101), Expect = 2e-04
Identities = 28/101 (27%), Positives = 45/101 (43%)
Frame = +2
Query: 350 ERFQTGEILFQPRLAGVRAMSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGL 409
ERF+ EILF P GV + L + M + +++++GGS+ PG+
Sbjct: 17 ERFRCPEILFSPNWIGVDQVGLDEMAGVSMRRLSCKDEKLEQRMTNSILVTGGSSLFPGI 196
Query: 410 AERLEKELHSLLPPYMSNGIRVIPPPHGADTAWFGAKLIGS 450
ERLE + + P + I+++ AW GA S
Sbjct: 197 IERLEAGIRMIRP--CGSPIKIVRALDPVMDAWRGASAYAS 313
>AW257228 GP|17342711|gb 1-aminocyclopropanecarboxylic acid oxidase {Medicago
truncatula}, partial (11%)
Length = 702
Score = 41.6 bits (96), Expect = 6e-04
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Frame = +1
Query: 7 CDSASSSIKRSTNTTNSSS------SSRSHQHHHHHAPSPLGLFDSLPPDILLKITRLLG 60
C S S+ +S+ ++ S + +S H + AP+ L L +++++I L
Sbjct: 223 CTSISNFNNKSSQSSQSPAYLPLMTNSDPPPHSNFGAPTSL-----LLDELIVEILSRLP 387
Query: 61 PKHAAKLCLVCKSWRSLVSDNELWAHFLQTHQPIHFHSILFSETNLT 107
K + VCKSW++L+SD+ ++A F P + H + S+ ++T
Sbjct: 388 VKTLMQFKCVCKSWKTLISDDPVFAKFHLHRSPRNTHLAILSDRSIT 528
>TC88634 weakly similar to GP|9758726|dbj|BAB09164.1 gene_id:MFC19.2~unknown
protein {Arabidopsis thaliana}, partial (69%)
Length = 1281
Score = 37.7 bits (86), Expect = 0.009
Identities = 22/83 (26%), Positives = 36/83 (42%), Gaps = 2/83 (2%)
Frame = +2
Query: 4 RKLCDSASSSIKRSTNTTNSSSSSRSHQHHHHHAPSPL--GLFDSLPPDILLKITRLLGP 61
RK D SS + + + SSS +++ ++ P + G F +PP++ I + L
Sbjct: 191 RKRTDEVDSSKQSTIQCSGSSSKPKNYGANNAMVPRRIETGFFSKVPPELFHHILKFLSS 370
Query: 62 KHAAKLCLVCKSWRSLVSDNELW 84
+ LVC SD LW
Sbjct: 371 EDLISCSLVCSFLSCAASDEALW 439
>TC80267 similar to GP|6692128|gb|AAF24593.1| T19E23.14 {Arabidopsis
thaliana}, partial (24%)
Length = 1625
Score = 37.0 bits (84), Expect = 0.016
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 19/105 (18%)
Frame = +1
Query: 16 RSTNTTNSSSSS----RSHQHHHHHAPSPLGLFDSLPPDILLKITRLLGPKHAAKLCL-- 69
R+++T + SSSS + H+H+HHH D L P + P H A+LCL
Sbjct: 166 RTSSTCDYSSSSSTTVKHHKHYHHHHNHQ---HDLLIPGL---------PDHIAQLCLSS 309
Query: 70 --------VCKSWRSLVSDNELWAHF-----LQTHQPIHFHSILF 101
VC SWR L+ F L + H HSI F
Sbjct: 310 INPSLLFKVCHSWRRLIYSPSFPPFFSLYAILSPPKSHHSHSIQF 444
>TC82343 similar to GP|10177628|dbj|BAB10775.
gb|AAF30317.1~gene_id:K6M13.17~similar to unknown
protein {Arabidopsis thaliana}, partial (9%)
Length = 666
Score = 36.6 bits (83), Expect = 0.021
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +2
Query: 47 LPPDILLKITRLLGPKHAAKLCLVCKSWRSLVSDNELWAHFLQTHQPIHFHSILF 101
LP +++ KI L K + VCKSW SL+SDN Q H ILF
Sbjct: 65 LPDELITKILVRLPVKSLIRFKSVCKSWFSLISDNHFANSHFQVTAATHTLRILF 229
>TC77818 similar to GP|21644661|dbj|BAC01219. putative tubby protein {Oryza
sativa (japonica cultivar-group)}, partial (85%)
Length = 1982
Score = 36.2 bits (82), Expect = 0.027
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Frame = +1
Query: 2 LLRKLCDSASSSIKRSTNTT---NSSSSSRSHQHHHHHAPSPL--GLFDSLPPDILLKIT 56
++R + D S +RS + SRS H H P + + SLPP++L +
Sbjct: 346 IVRDVRDGFGSLSRRSFEVRLPGHQRGKSRSSVHELHDQPPVIQNSPWASLPPELLRDVI 525
Query: 57 RLL--------GPKHAAKLCLVCKSWRSLVSD 80
+ L G KH VCKSWR + +
Sbjct: 526 KRLEATESTWPGRKHVVACAAVCKSWREMCKE 621
>TC90351 similar to GP|13605503|gb|AAK32745.1 AT5g44670/K15C23_12
{Arabidopsis thaliana}, partial (10%)
Length = 719
Score = 35.8 bits (81), Expect = 0.035
Identities = 13/21 (61%), Positives = 15/21 (70%)
Frame = +3
Query: 28 RSHQHHHHHAPSPLGLFDSLP 48
R H HHHHH P PL + +SLP
Sbjct: 438 RHHHHHHHHHPLPLSMKNSLP 500
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,587,477
Number of Sequences: 36976
Number of extensions: 286086
Number of successful extensions: 4307
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 3053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3801
length of query: 457
length of database: 9,014,727
effective HSP length: 99
effective length of query: 358
effective length of database: 5,354,103
effective search space: 1916768874
effective search space used: 1916768874
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Medicago: description of AC145470.4