BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145202.10 + phase: 0
(235 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78973 similar to PIR|D84745|D84745 plastid protein [imported] ... 483 e-137
TC90009 homologue to GP|21617909|gb|AAM66959.1 plastid protein {... 272 2e-78
TC78441 similar to GP|16226543|gb|AAL16196.1 AT3g15000/K15M2_14 ... 149 9e-37
BM813813 similar to GP|7549634|gb| DAG protein putative {Arabid... 144 2e-35
TC80424 homologue to GP|21593052|gb|AAM65001.1 DAG protein puta... 137 5e-33
TC81180 similar to GP|7549634|gb|AAF63819.1| DAG protein putati... 127 5e-30
TC87625 similar to PIR|T04886|T04886 DAG protein homolog F18F4.1... 123 7e-29
CB892736 homologue to PIR|D84745|D847 plastid protein [imported]... 119 1e-27
TC90607 similar to GP|20466724|gb|AAM20679.1 unknown protein {Ar... 94 6e-20
TC88068 homologue to GP|3204125|emb|CAA07232.1 putative Pi starv... 35 0.033
AW329015 weakly similar to PIR|T00349|T003 Avicelase III - Asper... 32 0.16
TC93626 weakly similar to PIR|G84776|G84776 hypothetical protein... 32 0.21
AL386164 homologue to GP|17432125|emb PUTATIVE TRANSMEMBRANE PRO... 31 0.36
BI263359 similar to GP|13346791|gb Mn-superoxide dismutase {Emer... 31 0.47
TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproli... 30 0.61
TC79856 similar to GP|21617998|gb|AAM67048.1 unknown {Arabidopsi... 30 0.61
TC80770 similar to GP|4680336|gb|AAD27627.1| hypothetical protei... 30 0.61
TC86065 homologue to PIR|S28420|S28420 ubiquitin / ribosomal pro... 29 1.4
AJ501243 weakly similar to PIR|A40411|A40 translation elongation... 29 1.8
BQ141541 similar to GP|334068|gb|A ORF2 {Pseudorabies virus}, pa... 29 1.8
>TC78973 similar to PIR|D84745|D84745 plastid protein [imported] -
Arabidopsis thaliana, partial (69%)
Length = 1583
Score = 483 bits (1243), Expect = e-137
Identities = 235/235 (100%), Positives = 235/235 (100%)
Frame = +3
Query: 1 MTTRAIASSFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQTIFQSLH 60
MTTRAIASSFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQTIFQSLH
Sbjct: 654 MTTRAIASSFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQTIFQSLH 833
Query: 61 FGGIHRAGYCNYSPLVPGSNTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQM 120
FGGIHRAGYCNYSPLVPGSNTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQM
Sbjct: 834 FGGIHRAGYCNYSPLVPGSNTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQM 1013
Query: 121 IDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYV 180
IDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYV
Sbjct: 1014IDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYV 1193
Query: 181 DPEHQDYGAELFVNGEIVQRSPERQRRVEPQAQRGDSRPRYHDRTKYVRRRDNQR 235
DPEHQDYGAELFVNGEIVQRSPERQRRVEPQAQRGDSRPRYHDRTKYVRRRDNQR
Sbjct: 1194DPEHQDYGAELFVNGEIVQRSPERQRRVEPQAQRGDSRPRYHDRTKYVRRRDNQR 1358
>TC90009 homologue to GP|21617909|gb|AAM66959.1 plastid protein {Arabidopsis
thaliana}, partial (74%)
Length = 1036
Score = 272 bits (695), Expect(2) = 2e-78
Identities = 135/201 (67%), Positives = 158/201 (78%), Gaps = 4/201 (1%)
Frame = +1
Query: 15 FSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQTIFQSLHFGGI----HRAGYC 70
++T T T + +T + L P+ L S P T S F + +RAG
Sbjct: 43 YTTVTITMAKLLSLSTLPSSLLLPPNRLLSSSTRRPSQVTPSSSFRFTTVQCRVNRAGNS 222
Query: 71 NYSPLVPGSNTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQ 130
YSPL G N++FS+RPP +MAPLFPGCDY HWLI++DKPGGEGA+KQQMIDCYV+TLA+
Sbjct: 223 TYSPLNSG-NSNFSERPPTDMAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAK 399
Query: 131 VLGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYVDPEHQDYGAE 190
VLGSEEEAKKKIYNVSCERYFGFGCE+D+ETSNKLEG+PGVLFVLPDSYVDPE++DYGAE
Sbjct: 400 VLGSEEEAKKKIYNVSCERYFGFGCEIDDETSNKLEGLPGVLFVLPDSYVDPENKDYGAE 579
Query: 191 LFVNGEIVQRSPERQRRVEPQ 211
LFVNGEIVQRSPERQ+RVEPQ
Sbjct: 580 LFVNGEIVQRSPERQKRVEPQ 642
Score = 37.7 bits (86), Expect(2) = 2e-78
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 213 QRGDSRPRYHDRTKYVRRRDNQR 235
QR RPRY+DRT+YVRR++N R
Sbjct: 647 QRHQDRPRYNDRTRYVRRKENTR 715
>TC78441 similar to GP|16226543|gb|AAL16196.1 AT3g15000/K15M2_14
{Arabidopsis thaliana}, partial (43%)
Length = 1476
Score = 149 bits (376), Expect = 9e-37
Identities = 92/236 (38%), Positives = 137/236 (57%), Gaps = 12/236 (5%)
Frame = +3
Query: 10 FKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQTIFQSLHFGGIHRAGY 69
F R + T T T+ + +++TT S S+L+ R + P+S T S H I +
Sbjct: 39 FSRVIPKTLTLTTFLSRSFSTTTTNPSS--SALSFLRRLRPLSATAITSRH---ILLPSF 203
Query: 70 CNYSPLVPGS-----NTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQMIDCY 124
+S S N ++S+RPP E L GCD+ HWL++++KP G+ T+ ++ID Y
Sbjct: 204 RAFSTRPTTSSLNDPNPNWSNRPPKETI-LLDGCDFEHWLVVMEKPEGD-PTRDEIIDSY 377
Query: 125 VKTLAQVLGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYVDPEH 184
+KTLA+V+GSEEEA+K IY+VS YF FG EE S KL+ +P V +VLPDSY++
Sbjct: 378 IKTLAEVIGSEEEARKSIYSVSTRHYFAFGALCSEELSYKLKELPKVRWVLPDSYLNVRE 557
Query: 185 QDYGAELFVNGEIVQRSPE------RQRRVEPQAQRGDSRPRYHDRTK-YVRRRDN 233
+DYG E F+NG+ V P+ R + R + RPR +DR++ + RRR+N
Sbjct: 558 KDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNDRPRNNDRSRNFERRREN 725
>BM813813 similar to GP|7549634|gb| DAG protein putative {Arabidopsis
thaliana}, partial (58%)
Length = 605
Score = 144 bits (364), Expect = 2e-35
Identities = 78/146 (53%), Positives = 100/146 (68%), Gaps = 4/146 (2%)
Frame = +1
Query: 94 LFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGF 153
L GCDY HWLII++ P ++ +M++ YVKTLAQVLGSEEEAKKKIY+VS Y GF
Sbjct: 52 LLDGCDYEHWLIIMEFPDNPKPSEDEMVNSYVKTLAQVLGSEEEAKKKIYSVSTSTYIGF 231
Query: 154 GCELDEETSNKLEGIPGVLFVLPDSYVDPEHQDYGAELFVNGEIVQRSPERQRRVEPQAQ 213
G + EE S K++ +PGVL+VLPDSY+D ++DYG +LFV+G+++ R + R E
Sbjct: 232 GALVSEELSYKIKELPGVLWVLPDSYLDVPNKDYGGDLFVDGKVIPR--PQYRYAERAPS 405
Query: 214 RGDSRPRYHDR---TKYVRRRD-NQR 235
R RPR HDR T V RRD NQR
Sbjct: 406 RNRPRPR-HDRRRETMQVERRDPNQR 480
>TC80424 homologue to GP|21593052|gb|AAM65001.1 DAG protein putative
{Arabidopsis thaliana}, partial (57%)
Length = 1039
Score = 137 bits (344), Expect = 5e-33
Identities = 68/139 (48%), Positives = 94/139 (66%)
Frame = +2
Query: 94 LFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQVLGSEEEAKKKIYNVSCERYFGF 153
+ PGCDYNHWLI+++ P ++ QMID Y++TLA VLGS EEAKK +Y S Y GF
Sbjct: 161 MLPGCDYNHWLIVMEFPKDPAPSRDQMIDTYLQTLATVLGSMEEAKKNMYAFSTTTYTGF 340
Query: 154 GCELDEETSNKLEGIPGVLFVLPDSYVDPEHQDYGAELFVNGEIVQRSPERQRRVEPQAQ 213
C +DE TS K +G+PGVL+VLPDSY+D ++ DYG + ++NGEI+ P + +P +
Sbjct: 341 QCTVDEATSEKFKGLPGVLWVLPDSYIDVKNMDYGGDKYINGEII---PCKYPTYQP--K 505
Query: 214 RGDSRPRYHDRTKYVRRRD 232
R S+ +D +Y RRRD
Sbjct: 506 RSGSK---NDGKRYERRRD 553
>TC81180 similar to GP|7549634|gb|AAF63819.1| DAG protein putative
{Arabidopsis thaliana}, partial (50%)
Length = 687
Score = 127 bits (318), Expect = 5e-30
Identities = 84/178 (47%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Frame = +3
Query: 4 RAIASSFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQTI-FQSLHFG 62
R +AS R L S+++S S + T A ALS S T P IP S + F+S G
Sbjct: 36 RTLASILTRALSSSSSSGIASLNR--TRFAFALSSASRQTLP---IPHSFPVRFKSSGSG 200
Query: 63 GIHRAGYCNYSPLVPGSNTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQMID 122
YSPL S ++S+RPP E L GCDY HWLII++ P ++ +M++
Sbjct: 201 ---------YSPLNDPS-PNWSNRPPKETI-LLDGCDYEHWLIIMEFPDNPKPSEDEMVN 347
Query: 123 CYVKTLAQVLGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYV 180
YVKTLAQVLGSEEEAKKKIY+VS Y GFG + EE S K++ +PGVL+VLPDSY+
Sbjct: 348 SYVKTLAQVLGSEEEAKKKIYSVSTSTYIGFGALVSEELSYKIKELPGVLWVLPDSYL 521
>TC87625 similar to PIR|T04886|T04886 DAG protein homolog F18F4.120 -
Arabidopsis thaliana, partial (27%)
Length = 1019
Score = 123 bits (308), Expect = 7e-29
Identities = 87/249 (34%), Positives = 119/249 (46%), Gaps = 21/249 (8%)
Frame = +2
Query: 2 TTRAIASSF------KRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLT-SPRFIIPMSQT 54
TT A+ASS R L S S + ++ + + G++S SL+ SP + +
Sbjct: 20 TTTAMASSLILLRRSLRSLSGIHHSFSATATSLSVPITGSISSHFSLSKSPNVVDGIQSR 199
Query: 55 IFQSLHFGGIHRAGYCNYSPLVPGSNTSFSDRPPAEMAP---LFPGCDYNHWLIIIDKPG 111
F+S + + Y S L P E+ P LF GCDYNHWL + D P
Sbjct: 200 SFRSTSIS-LLSSRYGETSELSP------------EIGPDTILFEGCDYNHWLFVCDFPR 340
Query: 112 GEGATKQQMIDCYVKTLAQVLG-SEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGIPG 170
++MI Y +T A+ L S EEAKKKIY S Y GF + EE S K EGIPG
Sbjct: 341 DNKPPPEEMIRIYEETCAKGLNISVEEAKKKIYACSTTTYTGFQAVMTEEESKKFEGIPG 520
Query: 171 VLFVLPDSYVDPEHQDYGAELFVNGEIVQRSP----------ERQRRVEPQAQRGDSRPR 220
V+FVLPDSY+DP ++ YG + ++ G+I+ R P R R Q P
Sbjct: 521 VIFVLPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRNLGGRRDYRQNNQLPNNRGNPS 700
Query: 221 YHDRTKYVR 229
Y++R R
Sbjct: 701 YNNRDSMPR 727
>CB892736 homologue to PIR|D84745|D847 plastid protein [imported] -
Arabidopsis thaliana, partial (28%)
Length = 885
Score = 119 bits (298), Expect = 1e-27
Identities = 62/123 (50%), Positives = 80/123 (64%), Gaps = 4/123 (3%)
Frame = +1
Query: 15 FSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQTIFQSLHFGGI----HRAGYC 70
++T T + + +T + L P+ L S P T S F + +RAG
Sbjct: 22 YTTVTLSMAKLLSLSTLPSSLLLPPNRLLSSSTRRPSQVTPSSSFRFTTVQCRVNRAGNS 201
Query: 71 NYSPLVPGSNTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQ 130
YSPL G N++FS+RPP +MAPLFPGCDY HWLI++DKPGGEGA+KQQMIDCYV+TLA+
Sbjct: 202 TYSPLNSG-NSNFSERPPTDMAPLFPGCDYEHWLIVMDKPGGEGASKQQMIDCYVQTLAK 378
Query: 131 VLG 133
VLG
Sbjct: 379 VLG 387
>TC90607 similar to GP|20466724|gb|AAM20679.1 unknown protein {Arabidopsis
thaliana}, partial (49%)
Length = 1143
Score = 93.6 bits (231), Expect = 6e-20
Identities = 48/136 (35%), Positives = 77/136 (56%)
Frame = +1
Query: 79 SNTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQMIDCYVKTLAQVLGSEEEA 138
S TS P LFP + HW++ +DKP TK Q++D Y + L +++G+E++A
Sbjct: 175 SATSNQTSIPQTDMLLFPNGNSKHWVVRMDKPAVGVVTKAQIVDHYAQILTKIMGNEKDA 354
Query: 139 KKKIYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYVDPEHQDYGAELFVNGEIV 198
+ IY+VS + FGF CELDE+ +++L G+PGVL V PD + E++DY N +
Sbjct: 355 QMCIYHVSWKTNFGFCCELDEDCAHELSGVPGVLSVQPDDNFESENKDYEGRNLENSLNM 534
Query: 199 QRSPERQRRVEPQAQR 214
S E + + ++
Sbjct: 535 PNSSEASQEASVKTKK 582
>TC88068 homologue to GP|3204125|emb|CAA07232.1 putative Pi
starvation-induced protein {Cicer arietinum}, partial
(72%)
Length = 568
Score = 34.7 bits (78), Expect = 0.033
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 124 YVKTLAQVLGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGIPGVLFVLPDSYV 180
+++TL VLGSEE AK + GF +L ++ PGVL V+P V
Sbjct: 207 HIRTLTAVLGSEEAAKDALLYSYKSAASGFSAKLTPHQVEQISKQPGVLQVVPSQTV 377
>AW329015 weakly similar to PIR|T00349|T003 Avicelase III - Aspergillus
aculeatus, partial (5%)
Length = 683
Score = 32.3 bits (72), Expect = 0.16
Identities = 16/26 (61%), Positives = 19/26 (72%)
Frame = +3
Query: 16 STTTSTSTSTSTYTTTVAGALSKPSS 41
ST+TSTSTSTST T T + S PS+
Sbjct: 195 STSTSTSTSTSTSTATDTSSTSSPST 272
Score = 30.0 bits (66), Expect = 0.80
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +3
Query: 16 STTTSTSTSTSTYTTTVAGALSKPSSLTS 44
+T+TSTSTSTST T+T S S TS
Sbjct: 189 ATSTSTSTSTSTSTSTATDTSSTSSPSTS 275
Score = 28.1 bits (61), Expect = 3.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 18 TTSTSTSTSTYTTTVAGALSKPSSLTSP 45
T +TSTSTST T+T + SS +SP
Sbjct: 183 TDATSTSTSTSTSTSTSTATDTSSTSSP 266
Score = 26.6 bits (57), Expect = 8.9
Identities = 13/29 (44%), Positives = 21/29 (71%)
Frame = +3
Query: 16 STTTSTSTSTSTYTTTVAGALSKPSSLTS 44
ST+TSTSTST+T T++ + + ++ TS
Sbjct: 207 STSTSTSTSTATDTSSTSSPSTSFTTCTS 293
>TC93626 weakly similar to PIR|G84776|G84776 hypothetical protein At2g36090
[imported] - Arabidopsis thaliana, partial (25%)
Length = 805
Score = 32.0 bits (71), Expect = 0.21
Identities = 21/62 (33%), Positives = 30/62 (47%)
Frame = -1
Query: 36 LSKPSSLTSPRFIIPMSQTIFQSLHFGGIHRAGYCNYSPLVPGSNTSFSDRPPAEMAPLF 95
LS PS + P P+S+ SLHF NY PL+P S P++++P+F
Sbjct: 796 LSPPSIDSHP---CPLSENTLPSLHFP--FPTSPVNYKPLLPSLIPSLRRVTPSQISPVF 632
Query: 96 PG 97
G
Sbjct: 631 SG 626
>AL386164 homologue to GP|17432125|emb PUTATIVE TRANSMEMBRANE PROTEIN
{Ralstonia solanacearum}, partial (5%)
Length = 479
Score = 31.2 bits (69), Expect = 0.36
Identities = 24/79 (30%), Positives = 29/79 (36%)
Frame = +2
Query: 18 TTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIPMSQTIFQSLHFGGIHRAGYCNYSPLVP 77
TT STS+S T + SS TSPR ++P + P VP
Sbjct: 227 TTRASTSSSLSRHTSPSTKTTRSSATSPRAVLPSA-------------------LCPSVP 349
Query: 78 GSNTSFSDRPPAEMAPLFP 96
DR PA PL P
Sbjct: 350 SWKLFLRDRTPATSTPLSP 406
>BI263359 similar to GP|13346791|gb Mn-superoxide dismutase {Emericella
nidulans}, partial (65%)
Length = 657
Score = 30.8 bits (68), Expect = 0.47
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 1 MTTRAIAS--SFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTSPRFIIP 50
+TT A+ S S R TT ST+ TS +TT+ +PS+ T+PR ++P
Sbjct: 176 LTTMALLSLTSPARSWSFTTPSTTRPTSPASTTLPTPSLRPSTRTTPRPLLP 331
>TC81043 weakly similar to GP|6523547|emb|CAB62280.1 hydroxyproline-rich
glycoprotein DZ-HRGP {Volvox carteri f. nagariensis},
partial (19%)
Length = 555
Score = 30.4 bits (67), Expect = 0.61
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 24/107 (22%)
Frame = +3
Query: 2 TTRAIASSFKRRLFSTTTSTST----------------STSTYTTTVAGALSKPSSL--- 42
+T+A +++ R ST+TST+T ST++ T+T SK S+
Sbjct: 237 STKATSTTKSRESTSTSTSTTTDSSKSTSTTKSRESTESTTSITSTTKAYTSKRQSIVTN 416
Query: 43 -----TSPRFIIPMSQTIFQSLHFGGIHRAGYCNYSPLVPGSNTSFS 84
+S I+ + QTIF S H I CN+S N S
Sbjct: 417 A*KNTSSSHVILLILQTIFSSRHISCI----CCNHSKSQKHQNAPLS 545
Score = 27.3 bits (59), Expect = 5.2
Identities = 22/46 (47%), Positives = 25/46 (53%), Gaps = 1/46 (2%)
Frame = +3
Query: 2 TTRAIASSFKRRLFSTTTST-STSTSTYTTTVAGALSKPSSLTSPR 46
TT A S + STT S STSTST TTT + SK +S T R
Sbjct: 210 TTSAAKSGESTKATSTTKSRESTSTSTSTTTDS---SKSTSTTKSR 338
>TC79856 similar to GP|21617998|gb|AAM67048.1 unknown {Arabidopsis
thaliana}, partial (30%)
Length = 1216
Score = 30.4 bits (67), Expect = 0.61
Identities = 12/45 (26%), Positives = 27/45 (59%)
Frame = -1
Query: 75 LVPGSNTSFSDRPPAEMAPLFPGCDYNHWLIIIDKPGGEGATKQQ 119
++ ++++ ++R + PL C + W+II+ + GG ATK++
Sbjct: 640 IIMHNHSTLTNRTSNNLCPLSQPCLHRLWIIIVAEDGGARATKRR 506
>TC80770 similar to GP|4680336|gb|AAD27627.1| hypothetical protein {Oryza
sativa subsp. indica} [Oryza sativa (indica
cultivar-group)], partial (7%)
Length = 507
Score = 30.4 bits (67), Expect = 0.61
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 2 TTRAIASSFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLTS 44
TT + ++ ST +STS++T+T T T +S PSS S
Sbjct: 135 TTASATTATTLHYISTASSTSSTTATSTATTLDYISTPSSTPS 7
>TC86065 homologue to PIR|S28420|S28420 ubiquitin / ribosomal protein CEP52
- wood tobacco, complete
Length = 1328
Score = 29.3 bits (64), Expect = 1.4
Identities = 15/39 (38%), Positives = 22/39 (55%)
Frame = -3
Query: 5 AIASSFKRRLFSTTTSTSTSTSTYTTTVAGALSKPSSLT 43
A +SS + T+ ST+T T +T V ++KP SLT
Sbjct: 549 ATSSSVVVTSYKQPTTLSTTTKTLSTAVQAVMAKPHSLT 433
>AJ501243 weakly similar to PIR|A40411|A40 translation elongation factor
eEF-2 - Caenorhabditis elegans, partial (18%)
Length = 497
Score = 28.9 bits (63), Expect = 1.8
Identities = 10/23 (43%), Positives = 15/23 (64%)
Frame = +1
Query: 95 FPGCDYNHWLIIIDKPGGEGATK 117
FP C ++HW +I D P +G T+
Sbjct: 424 FPQCVFDHWKVISDDPYEKGLTR 492
>BQ141541 similar to GP|334068|gb|A ORF2 {Pseudorabies virus}, partial (2%)
Length = 1320
Score = 28.9 bits (63), Expect = 1.8
Identities = 28/95 (29%), Positives = 39/95 (40%), Gaps = 2/95 (2%)
Frame = -2
Query: 4 RAIASSFKRRLFSTTTSTSTSTSTYTTTV--AGALSKPSSLTSPRFIIPMSQTIFQSLHF 61
RA+ +S + L S + S S S + + LS P SPR P +
Sbjct: 854 RALRASLRVLLASFSPSLRRSLSAILCSYFRSSVLSPPLVSLSPRVTNPSA--------- 702
Query: 62 GGIHRAGYCNYSPLVPGSNTSFSDRPPAEMAPLFP 96
A +YSP P + SFS R P+ +PL P
Sbjct: 701 --FLPAARGSYSPSSPPTPPSFSSRAPSPTSPLPP 603
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,151,936
Number of Sequences: 36976
Number of extensions: 104529
Number of successful extensions: 984
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of query: 235
length of database: 9,014,727
effective HSP length: 93
effective length of query: 142
effective length of database: 5,575,959
effective search space: 791786178
effective search space used: 791786178
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC145202.10