BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145202.1 - phase: 0
(383 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC86867 similar to GP|9294199|dbj|BAB02101.1 gb|AAF04893.1~gene_... 764 0.0
TC86866 372 e-103
TC81446 weakly similar to GP|15777865|gb|AAL05893.1 At1g54460/F2... 179 1e-45
TC77869 weakly similar to GP|21618286|gb|AAM67336.1 unknown {Ara... 170 7e-43
TC86727 similar to GP|4432859|gb|AAD20707.1| unknown protein {Ar... 123 1e-28
BI270894 similar to GP|16209720|gb| At2g35880/F11F19.21 {Arabido... 115 2e-26
TC79540 similar to GP|2829868|gb|AAC00576.1| Unknown protein {Ar... 41 7e-04
TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-... 37 0.010
TC85442 similar to GP|13543783|gb|AAH06040.1 Unknown (protein fo... 33 0.18
TC80297 similar to GP|21536679|gb|AAM61011.1 unknown {Arabidopsi... 33 0.18
AW685995 similar to PIR|I51618|I516 nucleolar phosphoprotein - A... 32 0.31
TC87846 similar to GP|5821151|dbj|BAA83717.1 RNA binding protein... 32 0.41
TC89413 weakly similar to GP|8778473|gb|AAF79481.1| F1L3.23 {Ara... 31 0.70
TC76717 similar to PIR|T10863|T10863 extensin precursor - kidney... 31 0.70
AW695729 similar to GP|22135814|gb| AT4g18560/F28J12_220 {Arabid... 31 0.70
TC76721 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum s... 31 0.70
BE324834 similar to GP|8132441|gb| extensin {Pisum sativum}, par... 31 0.70
TC76720 similar to GP|11121502|emb|CAC14888. putative extensin {... 31 0.70
TC76718 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum s... 31 0.70
TC76716 similar to PIR|T10863|T10863 extensin precursor - kidney... 31 0.70
>TC86867 similar to GP|9294199|dbj|BAB02101.1
gb|AAF04893.1~gene_id:MXC7.13~similar to unknown protein
{Arabidopsis thaliana}, partial (38%)
Length = 1557
Score = 764 bits (1973), Expect = 0.0
Identities = 383/383 (100%), Positives = 383/383 (100%)
Frame = +1
Query: 1 MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTK 60
MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTK
Sbjct: 115 MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTK 294
Query: 61 EYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTV 120
EYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTV
Sbjct: 295 EYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTV 474
Query: 121 PRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLK 180
PRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLK
Sbjct: 475 PRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLK 654
Query: 181 PDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQA 240
PDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQA
Sbjct: 655 PDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQA 834
Query: 241 MEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPK 300
MEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPK
Sbjct: 835 MEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPK 1014
Query: 301 LGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENETEH 360
LGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENETEH
Sbjct: 1015LGRRKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENETEH 1194
Query: 361 TKLIEEINMIKANGQAGIEISSQ 383
TKLIEEINMIKANGQAGIEISSQ
Sbjct: 1195TKLIEEINMIKANGQAGIEISSQ 1263
>TC86866
Length = 648
Score = 372 bits (954), Expect = e-103
Identities = 181/182 (99%), Positives = 182/182 (99%)
Frame = +1
Query: 1 MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTK 60
MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTK
Sbjct: 103 MGIEDSDICIIKEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTK 282
Query: 61 EYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTV 120
EYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTV
Sbjct: 283 EYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTV 462
Query: 121 PRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLK 180
PRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKP+K
Sbjct: 463 PRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPVK 642
Query: 181 PD 182
PD
Sbjct: 643 PD 648
>TC81446 weakly similar to GP|15777865|gb|AAL05893.1 At1g54460/F20D21_28
{Arabidopsis thaliana}, partial (36%)
Length = 1420
Score = 179 bits (455), Expect = 1e-45
Identities = 133/358 (37%), Positives = 178/358 (49%), Gaps = 13/358 (3%)
Frame = +2
Query: 39 MTESYEH-INETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLN 97
M ++ +H I E+ E +S E K E K+ S K + K+E+ P EG
Sbjct: 179 MVQAMDHEIKESAEGNSFVE--KHQERKDVLNTKSTKLNAGLSEEKNEKSEEPKMEGDKE 352
Query: 98 AKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKG------GHGRK 151
S + ++ P+ P+ ATE+ T E G +
Sbjct: 353 LTSPTAITIPVD---KEHTSPSAPQQSDQATEKHVTHTQTVDTEAVANGQDLSPNANNTH 523
Query: 152 SVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRAT 211
S N N S N+ K +Q +P RK L +KKH D++D+ SVAS + S + + T
Sbjct: 524 SPNTNNTHSPNSSKNSQSNSPFSSRK-LAQHDKKHHDDEDNWSVASSSVASTR----KVT 688
Query: 212 VASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKA 271
V +AP+FR ERA++RKEFY KLEEK +A E E+ Q EAR KEE+E A+KQLR+SL KA
Sbjct: 689 VGTAPTFRIYERAEKRKEFYMKLEEKNRAREEERLQYEARRKEEEEAALKQLRKSLVIKA 868
Query: 272 SPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQRKHRTS 331
P+PSFY+EGPPPK +LKKLP TR KSPKL RRKS AV SS V + +H S
Sbjct: 869 KPVPSFYYEGPPPKTELKKLPLTRPKSPKLSRRKSLGDAVISSPEV-----CTRVRHSIS 1033
Query: 332 NTNNCNLSDVTNGSGLDGLMSKTEN----ETEHTKLIEEINMI--KANGQAGIEISSQ 383
+ D M + N E TK ++E KA Q +IS Q
Sbjct: 1034SNPKSGFGTPVTQKNKDLSMGRNSNGACKTKERTKTVKETKASPPKATEQTNADISVQ 1207
>TC77869 weakly similar to GP|21618286|gb|AAM67336.1 unknown {Arabidopsis
thaliana}, partial (42%)
Length = 1574
Score = 170 bits (431), Expect = 7e-43
Identities = 128/357 (35%), Positives = 186/357 (51%), Gaps = 6/357 (1%)
Frame = +1
Query: 12 KEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEV 71
++P+ V + +G D+GH T E+ +H EVKECT EV
Sbjct: 187 QKPNGVAIALNGSPNDNGHVTSKIAAVKLEAEDH-----------------EVKECT-EV 312
Query: 72 SVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPH---KTRGNHKPRDTVKPTVPRPFSLAT 128
+V + + T + L+ S+ H K G K + +P+ L T
Sbjct: 313 NVFVEKCHETKDALVAKTTSGKNDLHEDESEKHEVQKKSGGDKELSSTQPS-----DLVT 477
Query: 129 ERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSD 188
E+ + T E G + S N N+ S + K + KTP KPL +KK+ D
Sbjct: 478 EKNGSYTHVDTTEAVLAGLN--LSPNANNMHSPYSSKNSLPKTPFSSTKPLHHYDKKNYD 651
Query: 189 EDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQN 248
++D+ SVAS +A S+++ +S+ T SAP+FRS+ERA +R+EFY KLEEK +A+ EK+Q
Sbjct: 652 DEDNWSVAS-SAMSMRTARSKVTQGSAPTFRSSERAAKRREFYLKLEEKNRALLEEKSQY 828
Query: 249 EARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPK--LGRRKS 306
EAR KEE+E AIKQ+R++L KA P+P+FY+E PPPK +LKKLP TR KSPK L RR++
Sbjct: 829 EARLKEEQEAAIKQMRKNLVIKAKPVPNFYYEAPPPKAELKKLPLTRPKSPKLNLNRRRT 1008
Query: 307 NSGAVYSSEGVKEKGAAAQRKHRTSN-TNNCNLSDVTNGSGLDGLMSKTENETEHTK 362
AV S +E G A+ S+ N +D + D + + N TK
Sbjct: 1009FGDAVNSQS--REVGNRARHSTGCSHIKGGSNTNDPLTQNIKDQAIRRNSNGAYKTK 1173
>TC86727 similar to GP|4432859|gb|AAD20707.1| unknown protein {Arabidopsis
thaliana}, partial (27%)
Length = 1852
Score = 123 bits (309), Expect = 1e-28
Identities = 96/289 (33%), Positives = 141/289 (48%), Gaps = 9/289 (3%)
Frame = +2
Query: 47 NETTEHHSSEESTKEYEVKECTTEVSVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKT 106
N + E E S + E V+ V KS K + ++ +SK
Sbjct: 299 NVSMEEEEEEGSNGKIEGNNVNVSKEVEIEIVDETEKSRTK-----KDLVKNNNSKLPSP 463
Query: 107 RGNHKPRDTVKPTVPRPFSLATERRATILTRPTFEEDNKGGHGRKSVNKKNVLSSNT-LK 165
RG ++ T R + A + + + H R+ VN + V T L
Sbjct: 464 RG-------LRMTSVRKNKDGKDEEAAVASSVSNGTSTFDSHPRQPVNNRAVNDKQTHLS 622
Query: 166 QNQLKTPLV----PRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKSRATVASAP----S 217
++ KT P + +P K D+ A + + + K R V + P S
Sbjct: 623 KHSGKTDAASTEAPMEKTRPHLIKKEPLDNLPGKAESSFPTSEDAKPRR-VGTMPTYGFS 799
Query: 218 FRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSF 277
F+ ERA+RRKEFYSKLEE+ A E E++ +A++KE +E IK+LR+ L FKA+PMPSF
Sbjct: 800 FKCNERAERRKEFYSKLEERIHAKEVEESNIQAKTKESQEAEIKRLRKKLAFKATPMPSF 979
Query: 278 YHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVYSSEGVKEKGAAAQR 326
Y E P +V+LKK+P TRAKSPKLGR+KS++ SSE ++AQ+
Sbjct: 980 YQEPTPSRVELKKIPTTRAKSPKLGRKKSST---MSSELDVNSNSSAQQ 1117
>BI270894 similar to GP|16209720|gb| At2g35880/F11F19.21 {Arabidopsis
thaliana}, partial (21%)
Length = 652
Score = 115 bits (289), Expect = 2e-26
Identities = 70/174 (40%), Positives = 100/174 (57%)
Frame = +2
Query: 184 KKHSDEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEA 243
K S + V S T++ KS S SFR ERA++R+EF+SKLEEK Q EA
Sbjct: 59 KVKSQTEKMTDVNSTTSSLTPGKKSNG---SGFSFRLEERAEKRREFFSKLEEKIQEKEA 229
Query: 244 EKNQNEARSKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGR 303
E + + +SKE +E IK+LR+ + FKA+PMPSFY E PPPKV+LKK+P TR KSPKLGR
Sbjct: 230 EISNLQEKSKESQEAEIKKLRKRMTFKAAPMPSFYKE-PPPKVELKKIPTTRPKSPKLGR 406
Query: 304 RKSNSGAVYSSEGVKEKGAAAQRKHRTSNTNNCNLSDVTNGSGLDGLMSKTENE 357
K + S + Q+K+ ++ DV++ + +K +++
Sbjct: 407 NKGSIANNNSEDKSSSIPHEKQQKNDSTKAKVKGYKDVSSKKPIKKTQAKVQSQ 568
>TC79540 similar to GP|2829868|gb|AAC00576.1| Unknown protein {Arabidopsis
thaliana}, partial (7%)
Length = 1003
Score = 41.2 bits (95), Expect = 7e-04
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = +3
Query: 200 ATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEA 259
AT + K +V + +S ++++ K K+EEK E+ + + + KEEKE
Sbjct: 321 ATVERMEKRSGSVVRTLAPKSDIKSEKGKASSRKIEEKPNTKVVERTRLQTKLKEEKEVE 500
Query: 260 IKQLRRSLKFKASPMPSFY 278
+K+L+ FKA+P+P+ Y
Sbjct: 501 MKKLKHD--FKATPLPTSY 551
>TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-related
protein complex AP-3 beta 1 subunit {Mus musculus},
partial (2%)
Length = 931
Score = 37.4 bits (85), Expect = 0.010
Identities = 39/190 (20%), Positives = 69/190 (35%), Gaps = 8/190 (4%)
Frame = +1
Query: 12 KEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEV 71
K D+VV D S E ++ + +E E + T+ S++S + +T +
Sbjct: 148 KPADKVVNEQDEDSSSEEEEGDEEDGSSSEDEEEEDNQTQQTPSKDSKPASKNPPPSTPI 327
Query: 72 SVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERR 131
S P +SE E + S HK+ P VKP +P T+ +
Sbjct: 328 SNPKP-----AESESGSESGSESGTESDSEPEHKSEPTPPPNPKVKPLASKPMKTQTQAQ 492
Query: 132 ATILTRP------TFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLK--TPLVPRKPLKPDN 183
A P E + G ++S K + +N+++ L K
Sbjct: 493 AQSTPVPIKSGTKRVAESSTGNDSKRSKKKTTTAGGGSDDENEVEEDAKLTGEDSKKNFQ 672
Query: 184 KKHSDEDDSC 193
+ S+E+ +C
Sbjct: 673 RVFSEEERTC 702
>TC85442 similar to GP|13543783|gb|AAH06040.1 Unknown (protein for MGC:7642)
{Mus musculus}, partial (62%)
Length = 585
Score = 33.1 bits (74), Expect = 0.18
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 216 PSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMP 275
P ++ + +KE K EEK++ + E+ + E KEEK+E ++ K + +P P
Sbjct: 81 PKKEEPKKEEEKKEEAKKEEEKKEGEKKEEPKKEEEKKEEKKEEGEKKEEEKKKEPAPDP 260
Score = 29.6 bits (65), Expect = 2.0
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +3
Query: 212 VASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEE--KEEAIKQLRRSLKF 269
++ P+ ++ + +KE K EEK++ + E+ + E KEE KEE K+ + K
Sbjct: 39 ISVGPAKEPEKKEEPKKEEPKKEEEKKEEAKKEEEKKEGEKKEEPKKEEEKKEEK---KE 209
Query: 270 KASPMPSFYHEGPPPKVDLKKLPPTRAKSPKL 301
+ + P P L+ + RA +P +
Sbjct: 210 EGEKKEEEKKKEPAPDPVLEMVKAYRAYNPHM 305
>TC80297 similar to GP|21536679|gb|AAM61011.1 unknown {Arabidopsis
thaliana}, partial (67%)
Length = 770
Score = 33.1 bits (74), Expect = 0.18
Identities = 42/201 (20%), Positives = 81/201 (39%), Gaps = 14/201 (6%)
Frame = +1
Query: 82 RKSEEKLTPDFEGVL------NAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATERRATIL 135
R+ ++KL D E +L + KP + R + P+D V P+P +L + A+ +
Sbjct: 28 RQVKQKLPKDGERILAPTRRPDGTLRKPVRIRAGYTPQDEVAIYQPKP-ALMRKEMASHI 204
Query: 136 TRPTFEEDNKGGHGRKSVNKKNVLSSNTLKQNQLKTPLVP--------RKPLKPDNKKHS 187
P ++ K+V K+N + +T L P ++ + +N HS
Sbjct: 205 GPPGYDPQLDSKPKTKAV-KRNERKKEKKRLQAKETNLEPTVVEDSRKQENVIVENSVHS 381
Query: 188 DEDDSCSVASGTATSVKSFKSRATVASAPSFRSTERAQRRKEFYSKLEEKQQAMEAEKNQ 247
+A TS+ + + + AS P + + +R + K+ + E Q
Sbjct: 382 LTSQINELAVSGDTSIVTPTTNSVEASEPIGSAQDLDKRIRALKKKIRLTEALQEKTAEQ 561
Query: 248 NEARSKEEKEEAIKQLRRSLK 268
+ + EK ++ R+ LK
Sbjct: 562 DLKPEQLEKLAKLEDWRKELK 624
>AW685995 similar to PIR|I51618|I516 nucleolar phosphoprotein - African
clawed frog, partial (5%)
Length = 516
Score = 32.3 bits (72), Expect = 0.31
Identities = 26/120 (21%), Positives = 51/120 (41%), Gaps = 9/120 (7%)
Frame = +3
Query: 149 GRKSVNKKNVLSSNTLKQNQLKTPLVPRKPLKPDNKKHSDEDDSCSVASGTATSVKSFKS 208
G+K+ + K+ + P+ + + S ED++ + + A + K
Sbjct: 96 GKKAAKAEEEKKKQQKKKEEKPAPMEVEEDSSSSEESSSSEDEAPAKKAAPAKKAAAKKE 275
Query: 209 RATVASAPSFRS--------TERAQRRKEFYSKLEEKQQAMEA-EKNQNEARSKEEKEEA 259
++ + S S ++A +KE S+ E E+ E+ +NEAR + E+EEA
Sbjct: 276 SSSEEESSSSESESEEEEKPAKKAAAKKESSSEEESSSSEEESDEEEKNEARRR*EQEEA 455
>TC87846 similar to GP|5821151|dbj|BAA83717.1 RNA binding protein {Homo
sapiens}, partial (2%)
Length = 550
Score = 32.0 bits (71), Expect = 0.41
Identities = 27/118 (22%), Positives = 44/118 (36%)
Frame = +1
Query: 12 KEPDRVVVYSDGISQDSGHETGTDNHNMTESYEHINETTEHHSSEESTKEYEVKECTTEV 71
K D+VV D S E ++ + +E E + T+ S++S + +T +
Sbjct: 130 KPADKVVNEQDEDSSSEEEEGDEEDGSSSEDEEEEDNQTQQTPSKDSKPASKNPPPSTPI 309
Query: 72 SVKAPDVSNIRKSEEKLTPDFEGVLNAKSSKPHKTRGNHKPRDTVKPTVPRPFSLATE 129
S P +SE E + S HK+ P VKP +P T+
Sbjct: 310 SNPKP-----AESESGSESGSESGTESDSEPEHKSEPTPPPNPKVKPLASKPMKTQTQ 468
>TC89413 weakly similar to GP|8778473|gb|AAF79481.1| F1L3.23 {Arabidopsis
thaliana}, partial (47%)
Length = 749
Score = 31.2 bits (69), Expect = 0.70
Identities = 22/74 (29%), Positives = 32/74 (42%), Gaps = 7/74 (9%)
Frame = +1
Query: 232 SKLEEKQQAMEAEKNQNEAR-------SKEEKEEAIKQLRRSLKFKASPMPSFYHEGPPP 284
S +E+K Q + K +AR K EKE+ +++ +L K SP P P P
Sbjct: 493 SFIEQKHQVPQNFKKSLKARLRMLVGHGKLEKEQNCFKIKEALSVKKSPSPKQKEAKPSP 672
Query: 285 KVDLKKLPPTRAKS 298
K + P R S
Sbjct: 673 SPKRKMVRPKRQSS 714
>TC76717 similar to PIR|T10863|T10863 extensin precursor - kidney bean,
partial (56%)
Length = 928
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 509 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 604
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 668 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 763
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 350 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 445
Score = 29.6 bits (65), Expect = 2.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 264 RRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
++ K+ + P P + ++ PPP V K PP K P
Sbjct: 149 KKPYKYASPPPPVYKYKSPPPPVYKYKSPPPPPKKP 256
Score = 28.9 bits (63), Expect = 3.5
Identities = 16/45 (35%), Positives = 23/45 (50%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVY 312
K+K+ P P + ++ PPP V K PP P + + KS VY
Sbjct: 290 KYKSPPPPVYKYKSPPPPVYKYKSPP-----PPVYKYKSPPPPVY 409
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 638 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 742
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 320 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 424
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 479 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 583
>AW695729 similar to GP|22135814|gb| AT4g18560/F28J12_220 {Arabidopsis
thaliana}, partial (7%)
Length = 408
Score = 31.2 bits (69), Expect = 0.70
Identities = 19/62 (30%), Positives = 30/62 (47%), Gaps = 14/62 (22%)
Frame = +3
Query: 262 QLRRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRA-KSPKL-------------GRRKSN 307
+++ ++ F SP P+ H PPP K+PP + K P++ RR+SN
Sbjct: 207 KVKVAMGFSKSPSPAHAHSTPPPPAKGGKMPPAKVRKVPEVVEFYHSLMRRDSQTRRESN 386
Query: 308 SG 309
SG
Sbjct: 387 SG 392
>TC76721 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum sativum},
partial (46%)
Length = 674
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +1
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 223 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 318
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 193 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 297
>BE324834 similar to GP|8132441|gb| extensin {Pisum sativum}, partial (44%)
Length = 451
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +3
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 75 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 170
Score = 29.3 bits (64), Expect = 2.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 264 RRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
++ K+ + P P + ++ PPP V K PP SP
Sbjct: 162 KKPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPVHSP 269
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 45 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 149
Score = 27.7 bits (60), Expect = 7.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 265 RSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVY 312
R K+ + P P + ++ PPP V K PP P + + KS VY
Sbjct: 6 RPYKYPSPPPPVYKYKSPPPPVYKYKSPP-----PPVYKYKSPPPPVY 134
>TC76720 similar to GP|11121502|emb|CAC14888. putative extensin {Nicotiana
sylvestris}, partial (51%)
Length = 1290
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 122 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 217
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 281 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 376
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 251 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 355
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 92 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 196
>TC76718 homologue to GP|8132441|gb|AAF73291.1| extensin {Pisum sativum},
partial (63%)
Length = 712
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +1
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 433 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 528
Score = 29.6 bits (65), Expect = 2.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 264 RRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
++ K+ + P P + ++ PPP V K PP K P
Sbjct: 232 KKPYKYASPPPPVYKYKSPPPPVYKYKSPPPPPKKP 339
Score = 28.9 bits (63), Expect = 3.5
Identities = 16/45 (35%), Positives = 23/45 (50%)
Frame = +1
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSPKLGRRKSNSGAVY 312
K+K+ P P + ++ PPP V K PP P + + KS VY
Sbjct: 373 KYKSPPPPVYKYKSPPPPVYKYKSPP-----PPVYKYKSPPPPVY 492
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 403 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 507
>TC76716 similar to PIR|T10863|T10863 extensin precursor - kidney bean,
partial (48%)
Length = 1275
Score = 31.2 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 18/32 (55%)
Frame = +3
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+K+ P P + ++ PPP V K PP K P
Sbjct: 69 KYKSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 164
Score = 29.3 bits (64), Expect = 2.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 264 RRSLKFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
++ K+ + P P + ++ PPP V K PP SP
Sbjct: 669 KKPYKYPSPPPPVYKYKSPPPPVYKYKSPPPPVHSP 776
Score = 28.9 bits (63), Expect = 3.5
Identities = 12/32 (37%), Positives = 17/32 (52%)
Frame = +3
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+ + P P + ++ PPP V K PP K P
Sbjct: 582 KYPSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 677
Score = 28.9 bits (63), Expect = 3.5
Identities = 12/32 (37%), Positives = 17/32 (52%)
Frame = +3
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPTRAKSP 299
K+ + P P + ++ PPP V K PP K P
Sbjct: 324 KYPSPPPPVYKYKSPPPPVYKYKSPPPPPKKP 419
Score = 28.5 bits (62), Expect = 4.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + ++ PPP V K PP + KSP
Sbjct: 39 KYKSPPPPVYKYKSPPPPVYKYKSPPPPVYKYKSP 143
Score = 28.1 bits (61), Expect = 5.9
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + + PPP V K PP + KSP
Sbjct: 552 KYKSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSP 656
Score = 28.1 bits (61), Expect = 5.9
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +3
Query: 268 KFKASPMPSFYHEGPPPKVDLKKLPPT---RAKSP 299
K+K+ P P + + PPP V K PP + KSP
Sbjct: 294 KYKSPPPPPYKYPSPPPPVYKYKSPPPPVYKYKSP 398
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.305 0.123 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,762,027
Number of Sequences: 36976
Number of extensions: 127811
Number of successful extensions: 968
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of query: 383
length of database: 9,014,727
effective HSP length: 98
effective length of query: 285
effective length of database: 5,391,079
effective search space: 1536457515
effective search space used: 1536457515
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC145202.1