TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144931.14 - phase: 0 /pseudo
         (122 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76973 homologue to GP|6984222|gb|AAF34799.1| 40S ribosomal pro...   144  8e-36
TC76975 homologue to GP|6984222|gb|AAF34799.1| 40S ribosomal pro...   132  2e-32
TC85056 homologue to GP|9651530|gb|AAF91178.1| ClpB {Phaseolus l...    27  2.5
BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xan...    26  3.3
TC81077 similar to GP|19698827|gb|AAL91149.1 unknown protein {Ar...    25  5.6
TC83832 similar to GP|5042435|gb|AAD38274.1| Unknown protein {Ar...    25  5.6
TC78179 weakly similar to GP|7211427|gb|AAF40306.1| RNA helicase...    25  7.3
TC83610 similar to SP|Q9LNQ4|ALA4_ARATH Potential phospholipid-t...    25  7.3
BQ137210 similar to SP|P09789|GRP1_ Glycine-rich cell wall struc...    25  7.3

>TC76973 homologue to GP|6984222|gb|AAF34799.1| 40S ribosomal protein S16
           {Euphorbia esula}, partial (96%)
          Length = 665

 Score =  144 bits (363), Expect = 8e-36
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = +3

Query: 1   MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
           MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV
Sbjct: 66  MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 245

Query: 61  DMRIRVKGG 69
           DMRIRVKGG
Sbjct: 246 DMRIRVKGG 272


>TC76975 homologue to GP|6984222|gb|AAF34799.1| 40S ribosomal protein S16
           {Euphorbia esula}, partial (96%)
          Length = 728

 Score =  132 bits (333), Expect = 2e-32
 Identities = 63/69 (91%), Positives = 67/69 (96%)
 Frame = +2

Query: 1   MEQVQCFGRKKNAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGV 60
           +EQVQCFGRKKNAVAVT+CKRGRGLIKING PIELVEPEILRFKA+EPILLLG+HRFAGV
Sbjct: 95  LEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELVEPEILRFKAFEPILLLGKHRFAGV 274

Query: 61  DMRIRVKGG 69
           DMRIRV GG
Sbjct: 275 DMRIRVNGG 301


>TC85056 homologue to GP|9651530|gb|AAF91178.1| ClpB {Phaseolus lunatus},
          partial (25%)
          Length = 743

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 14/21 (66%), Positives = 14/21 (66%)
 Frame = +3

Query: 17 THCKRGRGLIKINGCPIELVE 37
          THC RGRG    NGC  ELVE
Sbjct: 45 THCCRGRGYKWCNGC-WELVE 104


>BQ150123 similar to GP|21109992|gb| TonB-dependent receptor {Xanthomonas
           axonopodis pv. citri str. 306}, partial (2%)
          Length = 1131

 Score = 26.2 bits (56), Expect = 3.3
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 107 EGSGGGKRYGRTRG 120
           EG+GGGKR G+T G
Sbjct: 151 EGAGGGKRGGKTNG 192


>TC81077 similar to GP|19698827|gb|AAL91149.1 unknown protein {Arabidopsis
           thaliana}, partial (25%)
          Length = 809

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 12  NAVAVTHCKRGRGLIKINGCPIELVEPE 39
           NA++V   KRG GLI+   C + L E E
Sbjct: 427 NAISVCKYKRGEGLIEGTECSVCLSEFE 510


>TC83832 similar to GP|5042435|gb|AAD38274.1| Unknown protein {Arabidopsis
           thaliana}, partial (9%)
          Length = 423

 Score = 25.4 bits (54), Expect = 5.6
 Identities = 8/18 (44%), Positives = 13/18 (71%)
 Frame = +3

Query: 4   VQCFGRKKNAVAVTHCKR 21
           ++CF ++   VA+THC R
Sbjct: 342 IECFNQQGFIVAITHCSR 395


>TC78179 weakly similar to GP|7211427|gb|AAF40306.1| RNA helicase {Vigna
           radiata}, partial (12%)
          Length = 692

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 108 GSGGGKRYGRTRGG 121
           G GGGK YG  RGG
Sbjct: 302 GGGGGKGYGGGRGG 343


>TC83610 similar to SP|Q9LNQ4|ALA4_ARATH Potential phospholipid-transporting
           ATPase 4 (EC 3.6.3.1) (Aminophospholipid flippase 4).,
           partial (30%)
          Length = 1131

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
 Frame = -2

Query: 6   CFGRKKNAVA-VTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFA 58
           CF    N +  +T+CK G               P  L ++ Y+  LLLGRH  A
Sbjct: 275 CFLYHANIICTITYCKSGL--------------PSSLFYQPYDQCLLLGRHTTA 156


>BQ137210 similar to SP|P09789|GRP1_ Glycine-rich cell wall structural
           protein 1 precursor. [Petunia] {Petunia hybrida},
           partial (13%)
          Length = 990

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +1

Query: 110 GGGKRYGRTRGG 121
           GGGKR GR RGG
Sbjct: 7   GGGKRKGRRRGG 42


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.325    0.147    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,605,778
Number of Sequences: 36976
Number of extensions: 25117
Number of successful extensions: 108
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of query: 122
length of database: 9,014,727
effective HSP length: 84
effective length of query: 38
effective length of database: 5,908,743
effective search space: 224532234
effective search space used: 224532234
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)