TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144807.5 + phase: 0 
         (112 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

BE318378 similar to GP|6681351|dbj| ETAG-A3 {Lycopersicon escule...    26  2.0
TC91431 similar to GP|10177753|dbj|BAB11066. gene_id:MDN11.10~un...    26  2.6
TC77890 similar to GP|20466476|gb|AAM20555.1 alpha-mannosidase {...    26  2.6
TC82384 similar to PIR|T51591|T51591 dimethyladenosine transfera...    25  3.4
TC81123 similar to PIR|E96789|E96789 protein T23E18.10 [imported...    25  4.5
BQ137998 GP|6165483|emb putative nuclear transport receptor {Sch...    25  5.9
AW683124 homologue to PIR|E96600|E96 protein F14J16.20 [imported...    25  5.9
TC78151 similar to GP|22655006|gb|AAM98094.1 At1g76400/F15M4_10 ...    25  5.9

>BE318378 similar to GP|6681351|dbj| ETAG-A3 {Lycopersicon esculentum},
           partial (21%)
          Length = 654

 Score = 26.2 bits (56), Expect = 2.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 40  QKIIEALEAEKDSLTKTNKSIRNTLWDW 67
           QK+I A     +S TK+ K +   LW W
Sbjct: 638 QKVINAKIVHSNSPTKSKKPVFTNLWMW 555


>TC91431 similar to GP|10177753|dbj|BAB11066. gene_id:MDN11.10~unknown
           protein {Arabidopsis thaliana}, partial (86%)
          Length = 1047

 Score = 25.8 bits (55), Expect = 2.6
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 41  KIIEALEAEKDSLTKTNKSIRNTLWDWKQQLYAEAASDSAPVPLARLYE 89
           + I+A+ A K+         + +LW     L+A  ASD+   PL R  E
Sbjct: 853 RTIDAINAAKEQ--------KRSLWRVSSTLFAHIASDAVLKPLGRFAE 975


>TC77890 similar to GP|20466476|gb|AAM20555.1 alpha-mannosidase {Arabidopsis
           thaliana}, partial (55%)
          Length = 2422

 Score = 25.8 bits (55), Expect = 2.6
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +3

Query: 9   DIAKRASENNTVINVGLGAVFAILGARSYNQQKIIEALEAEKDSLTKTNK 58
           DIA R+   +    VGLG +  +   +     + I      K+SL +T+K
Sbjct: 849 DIAHRSGNESDAFEVGLGNLKLVYSRKEGKLTQYINRKRKVKESLEQTHK 998


>TC82384 similar to PIR|T51591|T51591 dimethyladenosine transferase (EC
           2.1.1.-) PFC1 [validated] - Arabidopsis thaliana,
           partial (78%)
          Length = 1138

 Score = 25.4 bits (54), Expect = 3.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 38  NQQKIIEALEAEKDSLTKTNKSIRNTLWDWKQQLY 72
           N Q   +   A K    +T   I  +LW WKQQ +
Sbjct: 68  NLQLPPQTATAAKSYRRQTESKILRSLWPWKQQSF 172


>TC81123 similar to PIR|E96789|E96789 protein T23E18.10 [imported] -
           Arabidopsis thaliana, partial (68%)
          Length = 1242

 Score = 25.0 bits (53), Expect = 4.5
 Identities = 10/35 (28%), Positives = 21/35 (59%)
 Frame = -2

Query: 38  NQQKIIEALEAEKDSLTKTNKSIRNTLWDWKQQLY 72
           N++++I+A+E   + +  ++   R  LW WK  +Y
Sbjct: 254 NKERLIQAIENTNNQVIISD---RFNLWSWKLSIY 159


>BQ137998 GP|6165483|emb putative nuclear transport receptor
           {Schizosaccharomyces pombe}, partial (11%)
          Length = 656

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = -2

Query: 5   HKIVDIAKRASENNTVINVGLGAV-----FAILGARS 36
           H ++ IAK A + ++V  +GLG       F ++ ARS
Sbjct: 286 HSVICIAKLAKQTHSVNRIGLGPA*KTVRFLMMEARS 176


>AW683124 homologue to PIR|E96600|E96 protein F14J16.20 [imported] -
           Arabidopsis thaliana, partial (11%)
          Length = 399

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 14/52 (26%), Positives = 24/52 (45%)
 Frame = +3

Query: 35  RSYNQQKIIEALEAEKDSLTKTNKSIRNTLWDWKQQLYAEAASDSAPVPLAR 86
           R + +Q ++ AL     +     ++   TLW WK +  AE  S++    L R
Sbjct: 66  RLFKEQGLLLALLLGLSAFFSLAETSITTLWPWKVRELAEKESENGVFRLLR 221


>TC78151 similar to GP|22655006|gb|AAM98094.1 At1g76400/F15M4_10
           {Arabidopsis thaliana}, partial (88%)
          Length = 2171

 Score = 24.6 bits (52), Expect = 5.9
 Identities = 9/17 (52%), Positives = 11/17 (63%)
 Frame = -2

Query: 55  KTNKSIRNTLWDWKQQL 71
           K N S+RN LW W Q +
Sbjct: 526 KLNVSLRNFLWKWLQYM 476


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.316    0.131    0.369 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,881,999
Number of Sequences: 36976
Number of extensions: 26212
Number of successful extensions: 125
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of query: 112
length of database: 9,014,727
effective HSP length: 88
effective length of query: 24
effective length of database: 5,760,839
effective search space: 138260136
effective search space used: 138260136
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)