BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144806.12 - phase: 1 /pseudo
(316 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77707 weakly similar to GP|8777405|dbj|BAA96995.1 SCARECROW ge... 174 4e-44
TC76809 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 ... 170 8e-43
TC77716 similar to GP|20465587|gb|AAM20276.1 unknown protein {Ar... 166 8e-42
TC79190 similar to PIR|E96542|E96542 scarecrow-like protein [imp... 161 3e-40
TC77063 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 ... 150 5e-37
TC86258 similar to GP|16930433|gb|AAL31902.1 AT4g17230/dl4650c {... 146 9e-36
TC78035 similar to GP|8778540|gb|AAF79548.1| F22G5.9 {Arabidopsi... 125 3e-29
TC89212 weakly similar to PIR|T02531|T02531 probable SCARECROW g... 121 4e-28
BG586348 similar to GP|20465587|gb unknown protein {Arabidopsis ... 117 4e-27
TC77895 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 ... 108 3e-24
TC80047 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 ... 104 4e-23
TC79937 similar to GP|14517552|gb|AAK62666.1 F17J6.12/F17J6.12 {... 96 1e-20
BM814126 weakly similar to GP|8778540|gb F22G5.9 {Arabidopsis th... 96 2e-20
TC82600 similar to GP|9757937|dbj|BAB08425.1 SCARECROW gene regu... 94 7e-20
BM813961 homologue to GP|13365610|db SCARECROW {Pisum sativum}, ... 90 1e-18
CA917523 similar to GP|17064924|gb| SCARECROW gene regulator {Ar... 89 2e-18
TC90344 weakly similar to PIR|H86282|H86282 protein F10B6.34 [im... 83 1e-16
BE326037 similar to GP|18491223|gb putative SHORT-ROOT (SHR) pro... 77 7e-16
TC81909 homologue to GP|13365610|dbj|BAB39155. SCARECROW {Pisum ... 74 6e-14
TC80896 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 ... 72 2e-13
>TC77707 weakly similar to GP|8777405|dbj|BAA96995.1 SCARECROW gene
regulator-like {Arabidopsis thaliana}, partial (65%)
Length = 2161
Score = 174 bits (441), Expect = 4e-44
Identities = 123/306 (40%), Positives = 162/306 (52%), Gaps = 10/306 (3%)
Frame = +2
Query: 21 EELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFAT 80
EEL + L + CPY KF ++ AN AI EA ++IHI+DF I QG QW LLQA A
Sbjct: 1079 EELLTYMQLLFEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGTQWMTLLQALAA 1258
Query: 81 RSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEF--TPILTPIELLD 138
R G P+ VRI+GI + + G RLS +K G+ EF P+ P D
Sbjct: 1259 RPGGAPH-VRITGIDDPVSKYARGKGLEVVGERLSLMSKKFGIPVEFHGIPVFGPDVTRD 1435
Query: 139 ESSFCIQPDEALAVNFMLQLYNLLDEN---TNSVEKALRLAKSLNPKIVTLGEYEASLTT 195
I+ EALAVNF LQL++ DE+ N + LRL KSL+PK+VTL E E++ T
Sbjct: 1436 --MLDIRHGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVVTLVEQESN-TN 1606
Query: 196 RVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGV--RERMEDK 253
F RF +Y+ A FES++ ++ +S ER VE L R I VI +ER+E
Sbjct: 1607 TTPFFNRFIETLDYYLAIFESIDVTLSRNSKERINVEQHCLARDIVNVIACEGKERVERH 1786
Query: 254 E---QWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPL 310
E +WK + GF LS Y S + LL YS Y+LVE A L L WK L
Sbjct: 1787 ELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLL--RCYSEHYTLVEKDGAML-LGWKSRNL 1957
Query: 311 LTVSSW 316
++ S+W
Sbjct: 1958 ISASAW 1975
>TC76809 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 {Vitis
vinifera}, partial (72%)
Length = 2764
Score = 170 bits (430), Expect = 8e-43
Identities = 115/304 (37%), Positives = 165/304 (53%), Gaps = 19/304 (6%)
Frame = +2
Query: 32 DACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRI 91
++ PY KFAH TANQAILEA G+ +H++DFG+ QG+QW AL+QA A R G P + R+
Sbjct: 1586 ESSPYLKFAHFTANQAILEAFAGAGRVHVIDFGLKQGMQWPALMQALALRPGGPP-TFRL 1762
Query: 92 SGI-PAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTP-ILTPIELLDESSFCIQPDEA 149
+GI P A T + + G +L++ A+ +G+ FEF + I LD + I+P EA
Sbjct: 1763 TGIGPPQADNTDALQQV---GWKLAQLAQTIGVQFEFRGFVCNSIADLDPNMLEIRPGEA 1933
Query: 150 LAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNY 209
+AVN + +L+ +L SVEK L K +NPKIVT+ E EA+ V FV+RF A +Y
Sbjct: 1934 VAVNSVFELHTML-ARPGSVEKVLNTVKKINPKIVTIVEQEANHNGPV-FVDRFTEALHY 2107
Query: 210 FAAFFESLE-----------PNMALDSPER-FQVESLLLGRRIDGVIGVR-----ERMED 252
+++ F+SLE + L SP + + + LG++I V+ ER E
Sbjct: 2108 YSSLFDSLEGSNSSSNNSNSNSTGLGSPSQDLLMSEIYLGKQICNVVAYEGVDRVERHET 2287
Query: 253 KEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLT 312
QW+ M + GFE V L A QA LL ++ Y VE L L W L+
Sbjct: 2288 LTQWRSRMGSAGFEPVHLGSNAFKQASTLLALFAGGDGYR-VEENNGCLMLGWHTRSLIA 2464
Query: 313 VSSW 316
S+W
Sbjct: 2465 TSAW 2476
>TC77716 similar to GP|20465587|gb|AAM20276.1 unknown protein {Arabidopsis
thaliana}, partial (63%)
Length = 2392
Score = 166 bits (421), Expect = 8e-42
Identities = 105/295 (35%), Positives = 157/295 (52%), Gaps = 8/295 (2%)
Frame = +3
Query: 30 LNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSV 89
L + CP KF + AN AI EA + +HI+DF I QG Q+ L+Q A+R GKP V
Sbjct: 1131 LFEVCPCFKFGFIAANGAISEAIKDDKKVHIIDFDINQGSQYITLIQTLASRP-GKPPYV 1307
Query: 90 RISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESSFCIQPDEA 149
R++G+ V +S G RL + A++LGL FEF + + ++ S +P EA
Sbjct: 1308 RLTGVDDPESVQRSVGGLSIIGQRLEKLAEVLGLPFEFRAVASRSSIVTPSMLNCRPGEA 1487
Query: 150 LAVNFMLQLYNLLDENTNSV---EKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETA 206
L VNF QL+++ DE+ ++V ++ LR+ KSLNPK+VT+ E + + T F+ RF A
Sbjct: 1488 LVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTS-PFLPRFVEA 1664
Query: 207 FNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLME 261
+NY++A FESL+ + +S +R VE L R I VI ER E +W+ M+
Sbjct: 1665 YNYYSAVFESLDATLPRESQDRVNVERQCLARDIVNVIACEGEDRIERYEVAGKWRARMK 1844
Query: 262 NCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
GF S +S + L+ Y Y ++E L W+D L+ S+W
Sbjct: 1845 MAGFTSSPMSTNVKEAIRELI--RQYCDKYKIIEEMGG-LHFGWEDKNLIVASAW 2000
>TC79190 similar to PIR|E96542|E96542 scarecrow-like protein [imported] -
Arabidopsis thaliana, partial (64%)
Length = 1669
Score = 161 bits (408), Expect = 3e-40
Identities = 112/325 (34%), Positives = 163/325 (49%), Gaps = 16/325 (4%)
Frame = +2
Query: 8 SSIASSNS--------SSTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIH 59
S IASS S S T EL L + CPY KF +++AN AI EA + N +H
Sbjct: 566 SKIASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEENEVH 745
Query: 60 IVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAK 119
I+DF I QG QW +L+QA A R G P +RI+GI + G +L A+
Sbjct: 746 IIDFQIGQGTQWVSLIQALARRPGGPP-KIRITGIDDSYSSNVRGGGVDIVGEKLLTLAQ 922
Query: 120 LLGLNFEFTPILTPIELLDESSFCIQPDEALAVNFMLQLYNLLDENT---NSVEKALRLA 176
+ FEF + + F ++P+EA+AVNF + L+++ DE+ N ++ LRLA
Sbjct: 923 SCHVPFEFHAVRVYPSEVRLEDFELRPNEAVAVNFAIMLHHVPDESVNIHNHRDRLLRLA 1102
Query: 177 KSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLL 236
K ++PK+VTL E E + T F++RF NY++A +ES++ + D ER VE L
Sbjct: 1103KHMSPKVVTLVEQEFN-TNNAPFLQRFLETMNYYSAVYESIDVVLPRDHKERINVEQHCL 1279
Query: 237 GRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLY 291
R + ++ ER E +W++ GF LS + S K LL SY Y
Sbjct: 1280AREVVNLVACEGEERVERHELLSKWRMRFTMAGFTPYPLSSFINSSIKNLL--ESYRGHY 1453
Query: 292 SLVESQPAFLSLAWKDVPLLTVSSW 316
+L E A L L W + L+ +W
Sbjct: 1454TLEERDGA-LFLGWMNQDLIASCAW 1525
>TC77063 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 {Vitis
vinifera}, partial (71%)
Length = 1762
Score = 150 bits (380), Expect = 5e-37
Identities = 99/293 (33%), Positives = 157/293 (52%), Gaps = 8/293 (2%)
Frame = +3
Query: 32 DACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRI 91
+ CP KFAH TANQAILEA +G +++H++DF I QG+QW AL+QA A R G P + R+
Sbjct: 813 ETCPNLKFAHFTANQAILEAFQGKSSVHVIDFSINQGMQWPALMQALALRPGGPP-AFRL 989
Query: 92 SGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTP-ILTPIELLDESSFCIQ--PDE 148
+GI A S + G RL++FA+ + + FE+ + + LD S ++ E
Sbjct: 990 TGIGPPASDNS--DHLQQVGWRLAQFAQTIHVQFEYRGFVANSLADLDASMLELRSPETE 1163
Query: 149 ALAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFN 208
++AVN + +L+ L+ ++EK + + + P+IVT+ E EA+ F++RF + +
Sbjct: 1164 SVAVNSVFELHK-LNARPGALEKVFSVIRQIRPEIVTVVEQEAN-HNGPAFLDRFTESLH 1337
Query: 209 YFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENC 263
Y++ F+SLE + P+ + + LG++I V+ ER E QW+ +
Sbjct: 1338 YYSTLFDSLEGSSV--EPQDKAMSEVYLGKQICNVVACEGTDRVERHETLNQWRNRFNSA 1511
Query: 264 GFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
GF V L A QA +LL ++ Y VE L L W PL+ S+W
Sbjct: 1512 GFSPVHLGSNAFKQASMLLALFAGGDGYK-VEENDGCLMLGWHTRPLIATSAW 1667
>TC86258 similar to GP|16930433|gb|AAL31902.1 AT4g17230/dl4650c {Arabidopsis
thaliana}, partial (62%)
Length = 2237
Score = 146 bits (369), Expect = 9e-36
Identities = 100/306 (32%), Positives = 151/306 (48%), Gaps = 8/306 (2%)
Frame = +3
Query: 19 TWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAF 78
T +EL L CPY KFA+++AN I EA + IHI+DF I QG QW L++A
Sbjct: 1071 TSKELMTYMHMLYQICPYFKFAYISANAVISEAMANESRIHIIDFQIAQGTQWQMLIEAL 1250
Query: 79 ATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLD 138
A R G P +RI+G+ + + G +LS FA+ G+ FEF +
Sbjct: 1251 ARRPGGPP-FIRITGVDDSQSFHARGGGLQIVGEQLSNFARSRGVLFEFHSAAMSGCEVQ 1427
Query: 139 ESSFCIQPDEALAVNFMLQLYNLLDENT---NSVEKALRLAKSLNPKIVTLGEYEASLTT 195
+ + P EALAVNF L+++ DE+ N ++ LRL KSL+PK+VTL E E++ T
Sbjct: 1428 RENLRVSPGEALAVNFPFSLHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNT 1607
Query: 196 RVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR--ERMEDK 253
F +RF +++ A FES++ D +R VE + R I +I ER+E
Sbjct: 1608 S-PFFQRFVETMDFYTAMFESIDVACTKDDKKRISVEQNCVARDIVNMIACEGIERVERH 1784
Query: 254 E---QWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPL 310
E +W+ GF LS + + +L ++ + +E + L L W +
Sbjct: 1785 EVFGKWRSRFSMAGFRQCQLSSSVMHSVQNMLKDFHQN---YWLEHRDGALYLGWMKRAM 1955
Query: 311 LTVSSW 316
T S+W
Sbjct: 1956 ATSSAW 1973
>TC78035 similar to GP|8778540|gb|AAF79548.1| F22G5.9 {Arabidopsis thaliana},
partial (24%)
Length = 2694
Score = 125 bits (313), Expect = 3e-29
Identities = 82/258 (31%), Positives = 133/258 (50%), Gaps = 13/258 (5%)
Frame = +3
Query: 26 SYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGK 85
+Y+ ACP+ KFAH AN+ IL+ E + +HI+DFGI+ G QW L++ F ++ G
Sbjct: 1419 AYQVFISACPFKKFAHFFANKMILKTAEKAETLHIIDFGILYGFQWPILIK-FLSKVEGG 1595
Query: 86 PNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILT-PIELLDESSFCI 144
P +RI+GI G P I TG RL+ + + ++FE+ I + E + I
Sbjct: 1596 PPKLRITGIEYPQAGFRPAERIEETGRRLANYCERFNVSFEYKAIPSRNWETIQIEDLNI 1775
Query: 145 QPDEALAVNFMLQLYNLLDE--NTNSVEKA-LRLAKSLNPKI----VTLGEYEASLTTRV 197
+ +E +AVN +++ NL DE + NS + A L+L + +NP I + G Y A
Sbjct: 1776 KSNEVVAVNCLVRFKNLHDETIDVNSPKDAVLKLIRKINPHIFVQSIVNGSYNAPF---- 1943
Query: 198 GFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR-----ERMED 252
F RF+ + +++A F+ + ++ ++ R +E LGR I V+ ER E
Sbjct: 1944 -FSTRFKESLFHYSAMFDMYDTLISRENEWRSMIEREFLGREIMNVVACEGFERVERPET 2120
Query: 253 KEQWKVLMENCGFESVGL 270
+QW+V GF + L
Sbjct: 2121 YKQWQVRNLRAGFRQLPL 2174
>TC89212 weakly similar to PIR|T02531|T02531 probable SCARECROW gene
regulator At2g37650 [imported] - Arabidopsis thaliana,
partial (37%)
Length = 1266
Score = 121 bits (303), Expect = 4e-28
Identities = 82/307 (26%), Positives = 140/307 (44%), Gaps = 12/307 (3%)
Frame = +1
Query: 22 ELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATR 81
++ +YK A P + + + I + + +++H++DFGI G QW L++ + R
Sbjct: 109 DMLKAYKLFVTASPLQRVTNTLLTKTIFKIVKNESSVHVIDFGICYGFQWPCLVRRLSLR 288
Query: 82 SSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPIELLDESS 141
G P +RI+GI G P + TG RL+++ K + FE+ I E +
Sbjct: 289 PGGPP-KLRITGIELPQPGFRPTERVEETGRRLAKYCKKFNVPFEYNFIAQKWETVCLED 465
Query: 142 FCIQPDEALAVNFMLQLYNLLDENTN---SVEKALRLAKSLNPKI----VTLGEYEASLT 194
I +E V+ + +L NL DE E L+L + +NPKI V G Y A
Sbjct: 466 LKIDRNEITLVSCLYRLKNLPDETVALNCPREAVLKLIRKINPKIFFHGVVNGSYSAPF- 642
Query: 195 TRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR-----ER 249
F+ RF+ A +F++ F+ E N+ + P+R +E L GR VI ER
Sbjct: 643 ----FLTRFKEALYHFSSLFDMFEANVPCEDPQRLMLERGLFGRDAINVIACEGAERVER 810
Query: 250 MEDKEQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVP 309
E +QW+V + GF + +++ K ++ + +V+ ++ WK
Sbjct: 811 PETYKQWQVRNKRAGFRQIRFDSDLVNETKAMVKKEYHKDF--VVDVDGKWVLQGWKGRI 984
Query: 310 LLTVSSW 316
L +S+W
Sbjct: 985 LNALSAW 1005
>BG586348 similar to GP|20465587|gb unknown protein {Arabidopsis thaliana},
partial (33%)
Length = 755
Score = 117 bits (294), Expect = 4e-27
Identities = 82/246 (33%), Positives = 126/246 (50%), Gaps = 12/246 (4%)
Frame = +1
Query: 74 LLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTP 133
L+Q A+RS KP+ VR++GI + + G RL + A+ LGL+FEF + +
Sbjct: 13 LIQTLASRSC-KPSHVRLTGIDDPESVQRSIGGLKIIGQRLEQLAETLGLSFEFRAVSSR 189
Query: 134 IELLDESSFCIQPDEALAVNFMLQLYNLLDENTNSV---EKALRLAKSLNPKIVTLGEYE 190
++ S + EAL VNF QL+++ DE+ ++V ++ LRL KSLNPK+VT+ E +
Sbjct: 190 TSIVTSSMLNCRRGEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQD 369
Query: 191 ASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVR--- 247
+ T F++RF A+NY++A FESL+ + +S +R VE L R I +
Sbjct: 370 VN-TNTAPFLQRFVEAYNYYSAVFESLDFTLPRESQDRMNVERQCLARDIVNTVACEGED 546
Query: 248 --ERMEDKEQWKVLMENCGFE----SVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFL 301
ER E +W+ M GF S +S Q K+ Y Y + E + A L
Sbjct: 547 RIERYEVAGKWRARMTMAGFSSSPMSTNVSDEIQKQVKL------YCDRYKIKEEKGA-L 705
Query: 302 SLAWKD 307
W+D
Sbjct: 706 HFGWED 723
>TC77895 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 {Arabidopsis
thaliana}, partial (41%)
Length = 2591
Score = 108 bits (270), Expect = 3e-24
Identities = 93/321 (28%), Positives = 163/321 (49%), Gaps = 7/321 (2%)
Frame = +3
Query: 3 KITAQSSIASSNSSSTTWEELTL---SYKALNDACPYSKFAHLTANQAILEATEGSNNIH 59
++ QS++ +SN++S + L L +YK+ ++ P +FA+ T+NQA+LEA EG + IH
Sbjct: 1458 QLLLQSNVNNSNNNSFSPTSLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVEGFDRIH 1637
Query: 60 IVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAK 119
I+DF I G QW++ +Q A R+ G P +++I+ ++ +S T L ++A
Sbjct: 1638 IIDFDIGFGGQWSSFMQELALRNGGAP-ALKITAF--VSPSHHDEIELSFTNENLMQYAG 1808
Query: 120 LLGLNFEFTPILTPIELLDESSF--CIQPDEALAVNFMLQLYNLLDENTNSVEKALRLAK 177
+ ++FE ILT +E L+ S+ ++ EA+ VN + ++ + + LR K
Sbjct: 1809 EINMSFEL-EILT-LESLNSVSWPQPLRDCEAVVVNLPICSFS---NYPSYLPLVLRFVK 1973
Query: 178 SLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQ-VESLLL 236
L PKIV + T F + A ++ ESL+ P+ Q +E L
Sbjct: 1974 QLMPKIVVTLDRSCD-RTDAPFPQHMVFALQSYSGLLESLDAVSVNVHPDVLQMIEKYYL 2150
Query: 237 GRRIDGVIGVRERMEDKE-QWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVE 295
I+ ++ R R +D+ WK L+ + GF + S++ SQA+ L+ + VE
Sbjct: 2151 QPAIEKLVLGRLRSQDRTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFH--VE 2324
Query: 296 SQPAFLSLAWKDVPLLTVSSW 316
+ L L W+ L++VS+W
Sbjct: 2325 KKQNSLVLCWQRKDLISVSTW 2387
>TC80047 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20
{Arabidopsis thaliana}, partial (30%)
Length = 1357
Score = 104 bits (260), Expect = 4e-23
Identities = 91/308 (29%), Positives = 149/308 (47%), Gaps = 17/308 (5%)
Frame = +2
Query: 26 SYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGK 85
+YK+ ++ P +FA+ T NQ+++EA E + IH++DF I G+QW++ +Q RS+GK
Sbjct: 257 AYKSFSEISPVLQFANFTCNQSLIEALERFDRIHVIDFDIGFGVQWSSFMQEIVLRSNGK 436
Query: 86 PNSVRISGIPAMALGTSPVS----SISATGNRLSEFAKLLGLNFEFTPILTPIELLDESS 141
P S++I+ + SP S ++ T LS++AK L + FEF + IE L+ S
Sbjct: 437 P-SLKITAV------VSPSSCNEIELNFTQENLSQYAKDLNILFEFN--VLNIESLNLPS 589
Query: 142 FCIQP------DEALAVNFMLQLYNLLDENTNSVEKALRLAKSLNPKIV-----TLGEYE 190
C P +EA+ VNF + + N + AL K L PKIV +
Sbjct: 590 -CPLPGHFFDSNEAIGVNFPVSSF---ISNPSCFPVALHFLKQLRPKIVVTLDKNCDRMD 757
Query: 191 ASLTTRVGFVERFETAFNYFAAFFESLEP-NMALDSPERFQVESLLLGRRIDGVIGVRER 249
L T V V ++A ESL+ N+ LD ++ +E + I+ ++
Sbjct: 758 VPLPTNVVHV------LQCYSALLESLDAVNVNLDVLQK--IERHYIQPTINKIVLSHHN 913
Query: 250 MEDK-EQWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDV 308
DK W+ + GF S++ +QA+ L+ VE +P+ L L W+
Sbjct: 914 QRDKLPPWRNMFLQSGFSPFSFSNFTEAQAECLVQRAPVRGFQ--VERKPSSLVLCWQRK 1087
Query: 309 PLLTVSSW 316
L++VS+W
Sbjct: 1088ELISVSTW 1111
>TC79937 similar to GP|14517552|gb|AAK62666.1 F17J6.12/F17J6.12 {Arabidopsis
thaliana}, partial (28%)
Length = 886
Score = 96.3 bits (238), Expect = 1e-20
Identities = 73/213 (34%), Positives = 111/213 (51%), Gaps = 10/213 (4%)
Frame = +3
Query: 114 LSEFAKLLGLNFEFTPI-LTPIELLDESSFCIQPDEALAVNFMLQLYNLLDENT----NS 168
LS+ A+ + FEF I ++P E+ E ++ EA+AVNF + L+++ DE+ N
Sbjct: 3 LSKLAESYNVAFEFHAIGVSPSEVRLED-LELRRGEAIAVNFAMMLHHVPDEDVHGGKNH 179
Query: 169 VEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPER 228
++ +RLAK L+PK+VTL E E++ T + F RF NY+ A FES++ + + ER
Sbjct: 180 RDRLVRLAKCLSPKVVTLVEQESN-TNELPFFARFVETMNYYFAVFESIDVALPREHRER 356
Query: 229 FQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAISQAKILLW 283
VE L R + ++ ER E ++W+ GF LS Y + LL
Sbjct: 357 INVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSIQNLLE 536
Query: 284 NYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
N Y Y+L E A L L W + PL+T S+W
Sbjct: 537 N--YQGHYTLQEKDGA-LYLGWMNQPLITSSAW 626
>BM814126 weakly similar to GP|8778540|gb F22G5.9 {Arabidopsis thaliana},
partial (10%)
Length = 543
Score = 95.5 bits (236), Expect = 2e-20
Identities = 52/161 (32%), Positives = 89/161 (54%), Gaps = 1/161 (0%)
Frame = +3
Query: 6 AQSSIASSNSSSTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGI 65
AQ+ +S ++ + E +Y+ P+ KFA+ AN+ I++A+ + +HI+DFGI
Sbjct: 6 AQTFYSSPSTKRISTAEFLKAYQVHLSTSPFKKFAYFFANKMIMKASANAETLHIIDFGI 185
Query: 66 VQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNF 125
+ G QW L++ + R G PN ++I+GI G P+ I TG RL+++ K + F
Sbjct: 186 LYGFQWPILIKFLSDREGGPPN-LKITGIEFPLPGFRPMEKIEETGRRLADYCKRFHVPF 362
Query: 126 EFTPILTPI-ELLDESSFCIQPDEALAVNFMLQLYNLLDEN 165
EF I + E + I+ +E + VN +++ NLLDE+
Sbjct: 363 EFNAIPSRYWETIQVEDLKIKSNEVVVVNSLMRFKNLLDES 485
>TC82600 similar to GP|9757937|dbj|BAB08425.1 SCARECROW gene regulator-like
protein {Arabidopsis thaliana}, partial (51%)
Length = 1141
Score = 94.0 bits (232), Expect = 7e-20
Identities = 51/131 (38%), Positives = 78/131 (58%), Gaps = 1/131 (0%)
Frame = +2
Query: 26 SYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGK 85
++++ N P KF+H TANQAI +A +G + +HI+D I+QG+QW L A+RS K
Sbjct: 734 AFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGLFHILASRSK-K 910
Query: 86 PNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTPILTPI-ELLDESSFCI 144
SVRI+G S + +TG RL++FA LGL FEF P+ I + + +
Sbjct: 911 IRSVRITGF------GSSSELLESTGRRLADFASSLGLPFEFHPVEGKIGSVTEPGQLGV 1072
Query: 145 QPDEALAVNFM 155
+P+EA+ V++M
Sbjct: 1073RPNEAIVVHWM 1105
>BM813961 homologue to GP|13365610|db SCARECROW {Pisum sativum}, partial
(21%)
Length = 550
Score = 90.1 bits (222), Expect = 1e-18
Identities = 48/109 (44%), Positives = 68/109 (62%)
Frame = -2
Query: 21 EELTLSYKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFAT 80
+++ +++ N P+ KF+H TANQAI EA + +HI+D I+QG+QW L A+
Sbjct: 342 QKVASAFQVFNGISPFVKFSHFTANQAIQEAFDREERVHIIDLDIMQGLQWPGLFHILAS 163
Query: 81 RSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEFTP 129
R G P VR++G LGTS + ++ ATG RLS+FA LGL FEF P
Sbjct: 162 RPGGPP-YVRLTG-----LGTS-METLEATGKRLSDFASKLGLPFEFFP 37
>CA917523 similar to GP|17064924|gb| SCARECROW gene regulator {Arabidopsis
thaliana}, partial (4%)
Length = 129
Score = 89.0 bits (219), Expect = 2e-18
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +1
Query: 184 VTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSP 226
VTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSP
Sbjct: 1 VTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSP 129
>TC90344 weakly similar to PIR|H86282|H86282 protein F10B6.34 [imported] -
Arabidopsis thaliana, partial (28%)
Length = 1170
Score = 83.2 bits (204), Expect = 1e-16
Identities = 43/101 (42%), Positives = 62/101 (60%)
Frame = +1
Query: 27 YKALNDACPYSKFAHLTANQAILEATEGSNNIHIVDFGIVQGIQWAALLQAFATRSSGKP 86
Y +ACPY KFAH TANQAILEA G + +H++DF ++ G+QW AL+QA A R G P
Sbjct: 751 YHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGPP 930
Query: 87 NSVRISGIPAMALGTSPVSSISATGNRLSEFAKLLGLNFEF 127
+R++GI + ++ G RL+E A+ + + F F
Sbjct: 931 -FLRLTGIGPPS--PDDRDNLREIGLRLAELARSVNVRFAF 1044
>BE326037 similar to GP|18491223|gb putative SHORT-ROOT (SHR) protein
{Arabidopsis thaliana}, partial (23%)
Length = 646
Score = 77.0 bits (188), Expect(2) = 7e-16
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
Frame = -1
Query: 57 NIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGTSPVSSISATGNRLSE 116
N HI+D QW LL+A ATR+ P+ + + +S V + G R+ +
Sbjct: 574 NFHIIDISNTLCTQWPTLLEALATRNDETPH---LKLTIVVTNNSSSVVVMKEVGQRMEK 404
Query: 117 FAKLLGLNFEFTPI--LTPIELLDESSFCIQPDEALAVNFMLQLYNLLDENTNSVEKALR 174
FA+L+G+ FE I L I L + IQ EA+A+N + L + E SV ++
Sbjct: 403 FARLMGVPFELNVISDLKHIRELTKERLGIQEGEAIALNCVGALRKVEVEERESV---VQ 233
Query: 175 LAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSPERFQVE 232
KSL+P++VT E E + FV+ FE ++ +FE LE + S ER +E
Sbjct: 232 FFKSLSPRVVTFVEEEGDFCSD-DFVKCFEECLKFYRIYFEMLEESFPPTSNERLMLE 62
Score = 23.9 bits (50), Expect(2) = 7e-16
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 39 FAHLTANQAILEATEGSNNI 58
F H+ +N AILEA +G +
Sbjct: 629 FGHVASNGAILEALDGEKKL 570
>TC81909 homologue to GP|13365610|dbj|BAB39155. SCARECROW {Pisum sativum},
partial (16%)
Length = 1040
Score = 74.3 bits (181), Expect = 6e-14
Identities = 46/122 (37%), Positives = 65/122 (52%), Gaps = 4/122 (3%)
Frame = +2
Query: 199 FVERFETAFNYFAAFFESLEPNMALDSPERFQVESLLLGRRIDGVIGVRERMEDKE---- 254
F+ RF A +Y++A F+SL + +S ER VE LL R I V+ V E
Sbjct: 17 FLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGEIKFH 196
Query: 255 QWKVLMENCGFESVGLSHYAISQAKILLWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVS 314
W+ ++ CGF + L+ A +QA +LL + S Y+LVE L L WKD+ LLT S
Sbjct: 197 NWREKLQQCGFRGISLAGNAATQASLLLGMFP-SEGYTLVEDN-GILKLGWKDLCLLTAS 370
Query: 315 SW 316
+W
Sbjct: 371 AW 376
>TC80896 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 {Vitis
vinifera}, partial (17%)
Length = 783
Score = 72.4 bits (176), Expect = 2e-13
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Frame = +1
Query: 167 NSVEKALRLAKSLNPKIVTLGEYEASLTTRVGFVERFETAFNYFAAFFESLEPNMALDSP 226
+ +E L +SLNPKIVT+ E EA+ GF+ERF A +Y++ F+SLE P
Sbjct: 13 SGIEMVLGWIRSLNPKIVTVVEQEANHNEN-GFMERFTEALHYYSTVFDSLEACPV--EP 183
Query: 227 ERFQVESLLLGRRIDGVIGVR-----ERMEDKEQWKVLMENCGFESVGLSHYAISQAKIL 281
++ E + L R I V+ ER E +WK + GF + L A QA +L
Sbjct: 184 DKAMAE-MYLQREICNVVCCEGPARVERHEPLVKWKERLGKAGFRPLHLGSNAFKQASML 360
Query: 282 LWNYSYSSLYSLVESQPAFLSLAWKDVPLLTVSSW 316
L +S VE L+L W PL+ S+W
Sbjct: 361 LTLFSAEGY--CVEENQGSLTLGWHSRPLIAASAW 459
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.316 0.131 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,026,732
Number of Sequences: 36976
Number of extensions: 112666
Number of successful extensions: 670
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of query: 316
length of database: 9,014,727
effective HSP length: 96
effective length of query: 220
effective length of database: 5,465,031
effective search space: 1202306820
effective search space used: 1202306820
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144806.12