BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144766.10 + phase: 2 /partial
(1162 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC83296 similar to GP|9711826|dbj|BAB07925.1 contains EST C72119... 519 e-147
BQ139406 similar to PIR|T48529|T4 hypothetical protein T22P22.90... 170 3e-42
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 50 4e-06
BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 48 3e-05
BQ151059 similar to GP|7291525|gb|A CG9888-PA {Drosophila melano... 45 2e-04
TC84888 similar to GP|21322752|dbj|BAB78536. cold shock protein-... 44 3e-04
TC76707 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulat... 43 8e-04
TC76706 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulat... 43 8e-04
BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 42 0.001
AL372330 similar to GP|21322752|dbj cold shock protein-1 {Tritic... 42 0.001
TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Gl... 42 0.002
TC76556 similar to PIR|S71779|S71779 glycine-rich RNA-binding pr... 41 0.002
TC76557 similar to PIR|S71779|S71779 glycine-rich RNA-binding pr... 41 0.002
TC76561 similar to PIR|S71779|S71779 glycine-rich RNA-binding pr... 41 0.002
TC87796 weakly similar to SP|P03211|EBN1_EBV EBNA-1 nuclear prot... 41 0.003
TC80000 weakly similar to GP|15451136|gb|AAK96839.1 periaxin-lik... 40 0.004
TC85605 similar to GP|437310|gb|AAA62850.1|| nodulin {Medicago t... 40 0.005
TC93504 weakly similar to PIR|S46286|S46286 RNA-binding protein ... 40 0.007
TC86690 similar to GP|6041851|gb|AAF02160.1| unknown protein {Ar... 40 0.007
BQ143784 weakly similar to SP|P33485|VNUA Probable nuclear antig... 39 0.012
>TC83296 similar to GP|9711826|dbj|BAB07925.1 contains EST
C72119(E1022)~unknown protein {Oryza sativa (japonica
cultivar-group)}, partial (20%)
Length = 1064
Score = 519 bits (1336), Expect(2) = e-147
Identities = 279/357 (78%), Positives = 285/357 (79%), Gaps = 14/357 (3%)
Frame = +3
Query: 766 EYDHACLRSCRSRALYEGLKVAATSDLMLAYMDFFLGGDEKRSDLPPRLHQRFPMSIIFG 825
+YDHACLRSCRSRALYEGLKVAATSDLMLAYMDFFLGGDEKRSDLPPRLHQRFPMSIIFG
Sbjct: 33 KYDHACLRSCRSRALYEGLKVAATSDLMLAYMDFFLGGDEKRSDLPPRLHQRFPMSIIFG 212
Query: 826 GDG-------------SYTSPFSLHSDNILTSIMSQSVPPTIWYRLVAGLNAQLRLVRRG 872
GD SY S+ S N + SI S + L
Sbjct: 213 GDRKLHKSFLSS***YSYQHHESVRSTNDMVSISGWS*-------------CSITLSSPW 353
Query: 873 HLKITFGPVISWLDVYANPKLATY-GVRVDLAWCQPTASGYCQFGLVVHATENENMSSSG 931
K F + + G VDLAWCQPTASGYCQFGLVVHATENENMSSSG
Sbjct: 354 TSKNNFRTCY*LA*CICKS*IGLHMGYPVDLAWCQPTASGYCQFGLVVHATENENMSSSG 533
Query: 932 ESYDDSRVTEKQSGFLRSPRNPVHHLTNNEQLLMPRRMSGGLLNGKILRTLKEKKTIYYP 991
ESYDDSRVTEKQSGFLRSPRNPVHHLTNNEQLLMPRRMSGGLLNGKILRTLKEKKTIYYP
Sbjct: 534 ESYDDSRVTEKQSGFLRSPRNPVHHLTNNEQLLMPRRMSGGLLNGKILRTLKEKKTIYYP 713
Query: 992 LALIMYNTKPIGHQDLVGLVISILLLGDFILVLLTLLQMYSLSLVNFFLVLFILPLGVLF 1051
LALIMYNTKPIGHQDLVGLVISILLLGDFILVLLTLLQMYSLSLVNFFLVLFILPLGVLF
Sbjct: 714 LALIMYNTKPIGHQDLVGLVISILLLGDFILVLLTLLQMYSLSLVNFFLVLFILPLGVLF 893
Query: 1052 PFPSGISALFSQGPRRSAGLARLYALWNMTSLVNVVVAFICGFIHYTVHSHDKHPNV 1108
PFPSGISALFSQGP RSAGLARLYALWNMTSL NVVVAFICGFIHYTVHSHDKH NV
Sbjct: 894 PFPSGISALFSQGPXRSAGLARLYALWNMTSLXNVVVAFICGFIHYTVHSHDKHXNV 1064
Score = 24.6 bits (52), Expect(2) = e-147
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 756 LQKLREFVRSE 766
LQKLREFVRSE
Sbjct: 2 LQKLREFVRSE 34
>BQ139406 similar to PIR|T48529|T4 hypothetical protein T22P22.90 - Arabidopsis
thaliana, partial (7%)
Length = 550
Score = 170 bits (431), Expect = 3e-42
Identities = 100/183 (54%), Positives = 123/183 (66%), Gaps = 8/183 (4%)
Frame = +3
Query: 915 FGLVVHATENEN----MSSSGESYDDSRVT----EKQSGFLRSPRNPVHHLTNNEQLLMP 966
+GLVV+A E + + S + SRV E G H T E+ M
Sbjct: 6 YGLVVYALEGGGYRGTIDGALRSEEISRVQTVKKEHPLGLASGAHLSPHGRT--EENCMR 179
Query: 967 RRMSGGLLNGKILRTLKEKKTIYYPLALIMYNTKPIGHQDLVGLVISILLLGDFILVLLT 1026
R+M G L+ L+ L EK+ I+Y L+ I+ +TKP+GHQDLVGLVIS+LLLGDF LVLLT
Sbjct: 180 RKMHGVALDVNNLQMLDEKRDIFYLLSFILQSTKPVGHQDLVGLVISMLLLGDFSLVLLT 359
Query: 1027 LLQMYSLSLVNFFLVLFILPLGVLFPFPSGISALFSQGPRRSAGLARLYALWNMTSLVNV 1086
LLQ+YS+SLV+ FLVL ILPLG+L PFP GI+ALFS GPRRSAGLAR YALWN+TS +NV
Sbjct: 360 LLQLYSISLVDVFLVLXILPLGILLPFPVGINALFSHGPRRSAGLARXYALWNLTSFINV 539
Query: 1087 VVA 1089
A
Sbjct: 540 AXA 548
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 50.4 bits (119), Expect = 4e-06
Identities = 51/154 (33%), Positives = 61/154 (39%), Gaps = 4/154 (2%)
Frame = -1
Query: 329 TGGLGKGRYFENGIGGGGGHGGYGGDG-YYNGNFIEGGTTYGDVDLPCELGSGSGNDSIA 387
TGG G+G Y G GGG + G GG+G Y G+ G G + C G G S
Sbjct: 498 TGGGGEG-YAYTGDGGGEVYTGGGGEG*AYTGDGGGDGDGGG**GV*CGAGDDGGGGSTQ 322
Query: 388 GATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLL 447
G GGG G + T G + G GD G T +G GG GG
Sbjct: 321 GGGGGGGGSTQGGGDGGGGE*TGGGGECTGGGGGGDKY----GYTGGVGE*GGGGGEXGG 154
Query: 448 FVQTLALGDSSII---STVGGQGSPSGGGGGGGG 478
A G + T GG + GGGGGGG
Sbjct: 153 GGGE*AGGGGGEL***GTGGGGENTGAGGGGGGG 52
Score = 34.3 bits (77), Expect = 0.29
Identities = 55/206 (26%), Positives = 63/206 (29%), Gaps = 1/206 (0%)
Frame = -1
Query: 329 TGGLGKGRYFENGIGGGGGHGGYGGDGY-YNGNFIEGGTTYGDVDLPCELGSGSGNDSIA 387
TGG+G G GGG + G GG+GY Y G+ GG Y +G G + A
Sbjct: 549 TGGIGPSY---TGGGGGDEYTGGGGEGYAYTGD--GGGEVY----------TGGGGEG*A 415
Query: 388 GATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLL 447
GGG DG+ GGG G
Sbjct: 414 YTGDGGG----------------------DGD------------------GGG**GV*C- 358
Query: 448 FVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGG 507
GD GG GS GGGGGGGG GG
Sbjct: 357 -----GAGDD------GGGGSTQGGGGGGGGSTQ------------------------GG 283
Query: 508 GFGGGQGLPGKNGSISGKACPKGLYG 533
G GGG G G +G YG
Sbjct: 282 GDGGGGE*TGGGGECTGGGGGGDKYG 205
Score = 30.4 bits (67), Expect = 4.1
Identities = 24/65 (36%), Positives = 29/65 (43%), Gaps = 5/65 (7%)
Frame = -1
Query: 455 GDSSIISTVGGQGSPSGGGGG-----GGGRVHFHWSHIPVGDEYITLASVEGSIITGGGF 509
GD+ I GG G GGGG GGG + ++ G+ Y T EG TG G
Sbjct: 573 GDAYEIPKTGGIGPSYTGGGGGDEYTGGGGEGYAYTGDGGGEVY-TGGGGEG*AYTGDGG 397
Query: 510 GGGQG 514
G G G
Sbjct: 396 GDGDG 382
>BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (39%)
Length = 1358
Score = 47.8 bits (112), Expect = 3e-05
Identities = 64/213 (30%), Positives = 77/213 (36%), Gaps = 28/213 (13%)
Frame = +2
Query: 330 GGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGA 389
GG G+G G GGG G G GG G G GG E G G G + G
Sbjct: 107 GGWGRGGPLRGGWGGGRGPRGGGGGGPGGGGRWRGGCPRPQAAC*GEWGRGRGGGPVQGR 286
Query: 390 TAGGGIIVMGSLEHSL--------TSLTLNGS--LRSDGESFGDDIRRQDGRTSSIG--- 436
G + G+ + +L + LTL + R DG G RR GR + G
Sbjct: 287 RGAGWVGEGGAGDGALDPGVPPLGSFLTLARAPRRRPDGGRAGG--RRGRGRWGAGGGRA 460
Query: 437 ---PGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGG-------GGGGGGRVH-FHWS 485
GGG+GG + G + GG G GG G GG H F W
Sbjct: 461 GGRRGGGAGGGARPRIVEGLWGGTGAGGLAGG-GEVGGGM*RLGREGRAPGGAAHQFSWQ 637
Query: 486 H----IPVGDEYITLASVEGSIITGGGFGGGQG 514
IP G+E GGG GGG G
Sbjct: 638 EGRVPIPGGEE-------------GGGGGGGGG 697
Score = 47.4 bits (111), Expect = 3e-05
Identities = 59/223 (26%), Positives = 76/223 (33%), Gaps = 18/223 (8%)
Frame = +1
Query: 327 GCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSG---N 383
G GG+G G G+GGG G G G + GG L +G G+G
Sbjct: 97 GACGGVGAGGAAAGGVGGGAGAEGGRRRRARGGGAVAGGMPSAAGGLLRGVGPGAGGGPG 276
Query: 384 DSIAGATAGGG-----------IIVMGSLEHSLTSLTLNGSLRSDGESFGDDI--RRQDG 430
AG GGG +G T + G G R+
Sbjct: 277 PGAAGGRVGGGGRGRGRGSGPRCAALGEFPDLGPGTTATP*RGARGWPAGSGALGGRRGA 456
Query: 431 RTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGR--VHFHWSHIP 488
R + GGG GG S +GG G GGGG GGR V
Sbjct: 457 RGRAPRGGGGGGGAA-----------SDCGGALGGDGGGGTGGGGRGGRGYVATRTRGTS 603
Query: 489 VGDEYITLASVEGSIITGGGFGGGQGLPGKNGSISGKACPKGL 531
G + G+ GG GGG+G G+ G +G C +G+
Sbjct: 604 AGRGCPPIFLARGTRSHSGGGGGGRG-GGRRGVAAG--CARGM 723
Score = 34.3 bits (77), Expect = 0.29
Identities = 49/168 (29%), Positives = 60/168 (35%), Gaps = 8/168 (4%)
Frame = +1
Query: 319 GVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDG---YYNGNFIEGGTTYGDVDLPC 375
G++ G G GG G G G GGGG G G G G F + G
Sbjct: 232 GLLRGVGPGAGGGPGPGA--AGGRVGGGGRGRGRGSGPRCAALGEFPDLGPGTTATP*RG 405
Query: 376 ELGSGSGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSI 435
G +G+ ++ G G G + G+L DG G T
Sbjct: 406 ARGWPAGSGALGGRRGARGRAPRGGGGGGGAASDCGGALGGDG----------GGGTG-- 549
Query: 436 GPGGGSGGTVLLFVQTLALGDSS-----IISTVGGQGSPSGGGGGGGG 478
GGG GG +V T G S+ I G S SGGGGGG G
Sbjct: 550 --GGGRGGRG--YVATRTRGTSAGRGCPPIFLARGTRSHSGGGGGGRG 681
Score = 30.4 bits (67), Expect = 4.1
Identities = 51/183 (27%), Positives = 64/183 (34%), Gaps = 21/183 (11%)
Frame = +3
Query: 319 GVISASGLGCTGG-----LGKGRYFE-NGIGGGGGHGGYGGDGYYN-GNFIEGGTTYGDV 371
G A+G G GG LG+ R + +G GGGGG GG G G +G + V
Sbjct: 165 GGAEAAGPGGGGGGGGDALGRRRLAKGSGAGGGGGARSRGGGGPGGWGRAGQGTGLWTPV 344
Query: 372 DLPCELG---SGSGNDSIAG-ATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRR 427
P + G D++ G A GG+ G E + G R G G
Sbjct: 345 CRPWGVS*PWPGHHGDALTGGARVAGGVGGAGGPEGGARAGAAGGG-RGGGRGLGLWRGS 521
Query: 428 QDGRTSSIGPGGGSGGTVL----------LFVQTLALGDSSIISTVGGQGSPSGGGGGGG 477
GR GG V + T LG GG+ GG GGG
Sbjct: 522 GGGRGRGDWRGGARWAGVCSDSDERDERRAGLPTNFLGKRDAFPFRGGRRGAGGGEEGGG 701
Query: 478 GRV 480
G V
Sbjct: 702 GGV 710
>BQ151059 similar to GP|7291525|gb|A CG9888-PA {Drosophila melanogaster},
partial (26%)
Length = 308
Score = 44.7 bits (104), Expect = 2e-04
Identities = 47/164 (28%), Positives = 48/164 (28%)
Frame = +2
Query: 315 VEYSGVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLP 374
+ SG G G GG G G G GGGGG GG GG G G GG
Sbjct: 11 IPLSGENPGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------- 163
Query: 375 CELGSGSGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSS 434
G G G G GGG G
Sbjct: 164 ---GGGGGGGGGGGGGGGGG----------------------------------GGGGGG 232
Query: 435 IGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGG 478
G GGG GG GG G GGGGGGGG
Sbjct: 233 GGGGGGGGG--------------------GGGGGGGGGGGGGGG 304
Score = 44.3 bits (103), Expect = 3e-04
Identities = 46/146 (31%), Positives = 46/146 (31%)
Frame = +1
Query: 333 GKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAG 392
GK R G GGGGG GG GG G G GG G G G G G G
Sbjct: 25 GKPRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGG 180
Query: 393 GGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTL 452
GG G G G G G GGG GG
Sbjct: 181 GG-----------------GGGGGGGGGGG-------GGGGGGGGGGGGGG--------- 261
Query: 453 ALGDSSIISTVGGQGSPSGGGGGGGG 478
GG G GGGGGGGG
Sbjct: 262 -----------GGGGGGGGGGGGGGG 306
Score = 41.2 bits (95), Expect = 0.002
Identities = 50/186 (26%), Positives = 50/186 (26%)
Frame = +2
Query: 339 ENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVM 398
EN GGGGG GG GG G G GG G G G G GGG
Sbjct: 26 ENPGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGG---- 160
Query: 399 GSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDSS 458
G G GGG GG
Sbjct: 161 ------------------------------GGGGGGGGGGGGGGG--------------- 205
Query: 459 IISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQGLPGK 518
GG G GGGGGGGG GGG GGG G G
Sbjct: 206 -----GGGGGGGGGGGGGGG---------------------------GGGGGGGGGGGGG 289
Query: 519 NGSISG 524
G G
Sbjct: 290 GGGGGG 307
Score = 39.3 bits (90), Expect = 0.009
Identities = 49/184 (26%), Positives = 49/184 (26%)
Frame = +1
Query: 341 GIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVMGS 400
G GGGGG GG GG G G GG G G G G GGG
Sbjct: 37 GGGGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGG------ 162
Query: 401 LEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDSSII 460
G GGG GG
Sbjct: 163 -----------------------------------GGGGGGGG----------------- 186
Query: 461 STVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQGLPGKNG 520
GG G GGGGGGGG G GGG GGG G G G
Sbjct: 187 ---GGGGGGGGGGGGGGG----------------------GGGGGGGGGGGGGGGGGGGG 291
Query: 521 SISG 524
G
Sbjct: 292 GGGG 303
Score = 38.5 bits (88), Expect = 0.015
Identities = 48/182 (26%), Positives = 48/182 (26%)
Frame = +2
Query: 343 GGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVMGSLE 402
GGGGG GG GG G G GG G G G G GGG
Sbjct: 35 GGGGGGGGGGGGGGGGGGGGGGG------------GGGGGGGGGGGGGGGGG-------- 154
Query: 403 HSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDSSIIST 462
G GGG GG
Sbjct: 155 ---------------------------------GGGGGGGG------------------- 178
Query: 463 VGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQGLPGKNGSI 522
GG G GGGGGGGG G GGG GGG G G G
Sbjct: 179 -GGGGGGGGGGGGGGG----------------------GGGGGGGGGGGGGGGGGGGGGG 289
Query: 523 SG 524
G
Sbjct: 290 GG 295
Score = 35.0 bits (79), Expect = 0.17
Identities = 31/95 (32%), Positives = 32/95 (33%)
Frame = +3
Query: 430 GRTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPV 489
G+T G GGG GG G GG G GGGGGGGG
Sbjct: 24 GKTPGGGGGGGGGGG----------GGGGGGGGGGGGGGGGGGGGGGGG----------- 140
Query: 490 GDEYITLASVEGSIITGGGFGGGQGLPGKNGSISG 524
G GGG GGG G G G G
Sbjct: 141 -----------GGGGGGGGGGGGGGGGGGGGGGGG 212
Score = 33.5 bits (75), Expect = 0.49
Identities = 29/92 (31%), Positives = 29/92 (31%)
Frame = +2
Query: 433 SSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDE 492
S PGGG GG G GG G GGGGGGGG
Sbjct: 20 SGENPGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGG-------------- 124
Query: 493 YITLASVEGSIITGGGFGGGQGLPGKNGSISG 524
GGG GGG G G G G
Sbjct: 125 -------------GGGGGGGGGGGGGGGGGGG 181
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/89 (32%), Positives = 29/89 (32%)
Frame = +1
Query: 436 GPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYIT 495
G GGG GG G GG G GGGGGGGG
Sbjct: 76 GGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGG----------------- 171
Query: 496 LASVEGSIITGGGFGGGQGLPGKNGSISG 524
G GGG GGG G G G G
Sbjct: 172 -----GGGGGGGGGGGGGGGGGGGGGGGG 243
Score = 32.3 bits (72), Expect = 1.1
Identities = 29/89 (32%), Positives = 29/89 (32%)
Frame = +3
Query: 436 GPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYIT 495
G GGG GG G GG G GGGGGGGG
Sbjct: 72 GGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGG----------------- 167
Query: 496 LASVEGSIITGGGFGGGQGLPGKNGSISG 524
G GGG GGG G G G G
Sbjct: 168 -----GGGGGGGGGGGGGGGGGGGGGGGG 239
>TC84888 similar to GP|21322752|dbj|BAB78536. cold shock protein-1 {Triticum
aestivum}, partial (58%)
Length = 612
Score = 44.3 bits (103), Expect = 3e-04
Identities = 21/39 (53%), Positives = 24/39 (60%), Gaps = 2/39 (5%)
Frame = +2
Query: 325 GLGCTGGLGKGRYFENGIGGGGGH--GGYGGDGYYNGNF 361
G G GG G G Y + G GGGGG+ GGYGG G Y G +
Sbjct: 395 GGGRGGGRGGGGYXQGGYGGGGGYXQGGYGGQGGYGGGY 511
Score = 37.7 bits (86), Expect = 0.026
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = +2
Query: 339 ENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGG 394
E G GGGGG GG G G Y+ + GG +YG G G G GGG
Sbjct: 293 EMGYGGGGGRGGGGYGGGYDQGYGGGGGSYGGGFGGGRGGGRGGGGYXQGGYGGGG 460
Score = 33.5 bits (75), Expect = 0.49
Identities = 19/46 (41%), Positives = 23/46 (49%), Gaps = 5/46 (10%)
Frame = +2
Query: 325 GLGCTGGLGKGRYFENGIGGGGGH-----GGYGGDGYYNGNFIEGG 365
G G GG G G ++ G GGGGG GG G G G + +GG
Sbjct: 308 GGGGRGGGGYGGGYDQGYGGGGGSYGGGFGGGRGGGRGGGGYXQGG 445
Score = 33.1 bits (74), Expect = 0.64
Identities = 26/69 (37%), Positives = 28/69 (39%)
Frame = +2
Query: 326 LGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDS 385
+G GG G+G G GGG G GG G Y G F GG G G G G
Sbjct: 296 MGYGGGGGRGG---GGYGGGYDQGYGGGGGSYGGGF--GGGRGG--------GRGGGGYX 436
Query: 386 IAGATAGGG 394
G GGG
Sbjct: 437 QGGYGGGGG 463
Score = 31.2 bits (69), Expect = 2.4
Identities = 17/37 (45%), Positives = 19/37 (50%), Gaps = 1/37 (2%)
Frame = +2
Query: 330 GGLGKGRYFENGIGGGGGHGGYGGDGY-YNGNFIEGG 365
GG G F G GGG G GGY GY G + +GG
Sbjct: 368 GGGSYGGGFGGGRGGGRGGGGYXQGGYGGGGGYXQGG 478
Score = 30.8 bits (68), Expect = 3.2
Identities = 32/105 (30%), Positives = 38/105 (35%)
Frame = +2
Query: 429 DGRTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIP 488
DGRT +I G +G G GG G GGG GGG + +
Sbjct: 224 DGRTKAIDVTGPNGAP--------PQGAPRQEMGYGGGGGRGGGGYGGG----YDQGYGG 367
Query: 489 VGDEYITLASVEGSIITGGGFGGGQGLPGKNGSISGKACPKGLYG 533
G Y GGGFGGG+G G G +G YG
Sbjct: 368 GGGSY------------GGGFGGGRG-----GGRGGGGYXQGGYG 451
>TC76707 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulated protein
CORA. [Alfalfa] {Medicago sativa}, partial (87%)
Length = 780
Score = 42.7 bits (99), Expect = 8e-04
Identities = 49/184 (26%), Positives = 59/184 (31%), Gaps = 4/184 (2%)
Frame = +1
Query: 341 GIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVMGS 400
G GGG H GG GY G + GG Y + G G N+ G GGG G
Sbjct: 160 GYGGGYNH---GGGGYNGGGYNHGGGGYNNGGGGYNHGGGGYNNGGGGYNHGGGGYNGGG 330
Query: 401 LEHSLTSLTLNGSLRSDG----ESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGD 456
H G + G G G + G GG G + VQT +
Sbjct: 331 YNHGGGGYNHGGGGYNHGGGGYNGGGGHGGHGGGGYNGGGGHGGHGAAESVAVQTEEKTN 510
Query: 457 SSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQGLP 516
+ GG + GG GG + H G GGG GG G
Sbjct: 511 EVNDAKYGGGYNHGGGSYNHGGGSYHHGG---------------GGYNHGGGGHGGHGGG 645
Query: 517 GKNG 520
G G
Sbjct: 646 GHGG 657
Score = 42.4 bits (98), Expect = 0.001
Identities = 54/181 (29%), Positives = 66/181 (35%), Gaps = 19/181 (10%)
Frame = +1
Query: 317 YSGVISASGLGCTGG---LGKGRYFENGIG---GGGGH----GGY--GGDGYYNGNFIEG 364
Y G + G G GG G G Y G G GGGG+ GGY GG GY G + G
Sbjct: 163 YGGGYNHGGGGYNGGGYNHGGGGYNNGGGGYNHGGGGYNNGGGGYNHGGGGYNGGGYNHG 342
Query: 365 GTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDD 424
G Y G G N G GGG G + NG G +
Sbjct: 343 GGGYNH-------GGGGYNHGGGGYNGGGGHGGHGGGGY-------NGGGGHGGHGAAES 480
Query: 425 IRRQ-DGRTSSIGP---GGG---SGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGG 477
+ Q + +T+ + GGG GG+ + G GG G GGG GG
Sbjct: 481 VAVQTEEKTNEVNDAKYGGGYNHGGGSYNHGGGSYHHGGGGYNHGGGGHGGHGGGGHGGH 660
Query: 478 G 478
G
Sbjct: 661 G 663
>TC76706 similar to SP|Q07202|CORA_MEDSA Cold and drought-regulated protein
CORA. [Alfalfa] {Medicago sativa}, partial (94%)
Length = 1034
Score = 42.7 bits (99), Expect = 8e-04
Identities = 48/153 (31%), Positives = 53/153 (34%), Gaps = 4/153 (2%)
Frame = +1
Query: 330 GGLGKGRYFENGIGGGGGHGGY---GGDGYYNGNFIEGGTTYGD-VDLPCELGSGSGNDS 385
GG G NG GG GGHGGY GG G YNG GG + V + E + ND+
Sbjct: 295 GGYNHGGGGYNGGGGHGGHGGYNGGGGHGGYNGGGGHGGHGAAESVAVQTEEKTNEVNDA 474
Query: 386 IAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTV 445
G GG GS H GS G S+ G G GG
Sbjct: 475 KYG---GGSYNHGGSYNHG------GGSYNHGGGSYHHG-----------GGGYNHGG-- 588
Query: 446 LLFVQTLALGDSSIISTVGGQGSPSGGGGGGGG 478
GG G GGG GG G
Sbjct: 589 ------------------GGHGGHGGGGHGGHG 633
>BQ141932 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (30%)
Length = 1338
Score = 42.0 bits (97), Expect = 0.001
Identities = 44/142 (30%), Positives = 51/142 (34%), Gaps = 3/142 (2%)
Frame = +2
Query: 341 GIGGGGGH-GGYGGDGYYNGNFIEGGTTYGDVDLPCELG--SGSGNDSIAGATAGGGIIV 397
G GGGGG GG GG+G G GG G G G G G TAGGGI
Sbjct: 152 GCGGGGGRGGGGGGEGEGEGWLGGGGKRKGRGGGETRAGGEDGGGVGGGGGGTAGGGIPQ 331
Query: 398 MGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDS 457
+ G R D R + GR +G GG GG
Sbjct: 332 WVQRAEGEWNCRCGGGARVDD-------RGRPGRGGEVGGWGGGGG-------------- 448
Query: 458 SIISTVGGQGSPSGGGGGGGGR 479
+ G +G GGG GGG+
Sbjct: 449 ---ESEGARG--WGGGRDGGGQ 499
Score = 37.7 bits (86), Expect = 0.026
Identities = 34/85 (40%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGG----------GGHGGYGGDGYYNGNFIEGGTTYGDVDLP 374
G G GGL +GR E G GG G GG GGDG GN G G V+LP
Sbjct: 190 GGGGGGGLVRGRRKEEGAWGGRDESWGGGWRGSGGGGGGDG-GGGNPAMGTKGGGGVELP 366
Query: 375 CELGSGSGNDSIAGATAGGGIIVMG 399
G G G A GGG V G
Sbjct: 367 MRRG-GEGR*PWATGAGGGGRRVGG 438
Score = 31.6 bits (70), Expect = 1.9
Identities = 28/86 (32%), Positives = 34/86 (38%), Gaps = 1/86 (1%)
Frame = +2
Query: 445 VLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFH-WSHIPVGDEYITLASVEGSI 503
++LF+ TL S GG G G GGGGGG W +G G
Sbjct: 92 IILFLSTLRCIPSRWCLDWGGCGGGGGRGGGGGGEGEGEGW----LGGGGKRKGRGGGET 259
Query: 504 ITGGGFGGGQGLPGKNGSISGKACPK 529
GG GGG G G G +G P+
Sbjct: 260 RAGGEDGGGVG--GGGGGTAGGGIPQ 331
>AL372330 similar to GP|21322752|dbj cold shock protein-1 {Triticum
aestivum}, partial (33%)
Length = 435
Score = 42.0 bits (97), Expect = 0.001
Identities = 28/75 (37%), Positives = 30/75 (39%)
Frame = +2
Query: 317 YSGVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCE 376
Y G G G GG G Y G GGG G GGYGG GY G + GG
Sbjct: 149 YGGSSGGYGGGGYGGGASGGYGGGGYGGGSG-GGYGGGGYGGGGYGGGG----------- 292
Query: 377 LGSGSGNDSIAGATA 391
G G G D + A
Sbjct: 293 -GGGYGGDKMGALGA 334
Score = 38.1 bits (87), Expect = 0.020
Identities = 34/91 (37%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +2
Query: 317 YSGVISASGLGCTGGLGKGRYFENGIGGGGG-HGGYGGDGYYNGNFIEGGTTYGDVDLPC 375
Y G S G +GG G G G GGG GGYGG GY G+ G YG
Sbjct: 104 YGGGSSGGYGGSSGGYGGSSGGYGGGGYGGGASGGYGGGGYGGGS----GGGYG------ 253
Query: 376 ELGSGSGNDSIAGATAGG-GIIVMGSLEHSL 405
G G G G GG G MG+L +L
Sbjct: 254 --GGGYGGGGYGGGGGGGYGGDKMGALGANL 340
Score = 36.2 bits (82), Expect = 0.075
Identities = 30/90 (33%), Positives = 32/90 (35%), Gaps = 13/90 (14%)
Frame = +2
Query: 318 SGVISASGLGCTGGLGKGRYFENGIGGG---GGHGGYGG--------DGYYNGNFIEGGT 366
SG S G GG Y + GGG G GGYGG G Y G GG
Sbjct: 20 SGGYGGSSSGGYGGSSSSSYPASSSGGGYGGGSSGGYGGSSGGYGGSSGGYGGGGYGGGA 199
Query: 367 T--YGDVDLPCELGSGSGNDSIAGATAGGG 394
+ YG G G G G GGG
Sbjct: 200 SGGYGGGGYGGGSGGGYGGGGYGGGGYGGG 289
Score = 32.3 bits (72), Expect = 1.1
Identities = 31/95 (32%), Positives = 33/95 (34%)
Frame = +2
Query: 430 GRTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPV 489
G SS G GG SGG G SS GG G + GG GGGG
Sbjct: 107 GGGSSGGYGGSSGG----------YGGSSGGYGGGGYGGGASGGYGGGG----------- 223
Query: 490 GDEYITLASVEGSIITGGGFGGGQGLPGKNGSISG 524
G GGG+GGG G G G
Sbjct: 224 ------YGGGSGGGYGGGGYGGGGYGGGGGGGYGG 310
Score = 32.0 bits (71), Expect = 1.4
Identities = 32/99 (32%), Positives = 36/99 (36%)
Frame = +2
Query: 416 SDGESFGDDIRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGG 475
S G G +S G GGGS G G SS GG G SGG GG
Sbjct: 41 SSGGYGGSSSSSYPASSSGGGYGGGSSG---------GYGGSS-----GGYGGSSGGYGG 178
Query: 476 GGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQG 514
GG + G + G GGG+GGG G
Sbjct: 179 GGYGGGASGGYGGGGYGGGSGGGYGGGGYGGGGYGGGGG 295
>TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Glycine max},
partial (70%)
Length = 738
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/129 (31%), Positives = 53/129 (40%), Gaps = 1/129 (0%)
Frame = -2
Query: 322 SASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGS 381
+ SG+GC GG G F GG G G GG G+ G G + LG S
Sbjct: 572 AGSGIGCGGGAGFSFGFSGCFGGSGFGSGGGGAGFSLG-------FSGSLGFSGSLGF-S 417
Query: 382 GNDSIAGATAGGGII-VMGSLEHSLTSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGG 440
G+ +G+ G GSL S SL L GSL G + S+G GGG
Sbjct: 416 GSLGFSGSFGFSGFFGFSGSLGFS-GSLGLTGSL---------------GFSGSLGLGGG 285
Query: 441 SGGTVLLFV 449
G T+ + +
Sbjct: 284 GGSTISMLL 258
>TC76556 similar to PIR|S71779|S71779 glycine-rich RNA-binding protein GRP1
- wheat, partial (95%)
Length = 754
Score = 41.2 bits (95), Expect = 0.002
Identities = 29/71 (40%), Positives = 30/71 (41%)
Frame = +2
Query: 324 SGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGN 383
SG G GG G G Y G G GG GYGG G Y G GG YG+ G G G
Sbjct: 344 SGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGGG---GGGGYGE-----RRGGGGGY 499
Query: 384 DSIAGATAGGG 394
G GG
Sbjct: 500 SRGGGGGGYGG 532
Score = 36.2 bits (82), Expect = 0.075
Identities = 18/35 (51%), Positives = 19/35 (53%)
Frame = +2
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNG 359
G G GG G+ R G GGG GGYGG GY G
Sbjct: 446 GGGGGGGYGERRGGGGGYSRGGGGGGYGGGGYSRG 550
Score = 34.3 bits (77), Expect = 0.29
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHG-GYGGDGYYNGNFIEGG 365
G G GG G G Y E GGGGG+ G GG GY G + GG
Sbjct: 431 GGGGYGGGGGGGYGERR-GGGGGYSRGGGGGGYGGGGYSRGG 553
Score = 30.0 bits (66), Expect = 5.4
Identities = 25/70 (35%), Positives = 26/70 (36%)
Frame = +2
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGND 384
G T + R G GGG G GGYGG G G G YG G G G
Sbjct: 305 GRNITVNQAQSRGSGGGGGGGRGGGGYGGGGGGYGGERRG---YGGGG-----GYGGGGG 460
Query: 385 SIAGATAGGG 394
G GGG
Sbjct: 461 GGYGERRGGG 490
>TC76557 similar to PIR|S71779|S71779 glycine-rich RNA-binding protein GRP1
- wheat, partial (95%)
Length = 912
Score = 41.2 bits (95), Expect = 0.002
Identities = 29/71 (40%), Positives = 30/71 (41%)
Frame = +1
Query: 324 SGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGN 383
SG G GG G G Y G G GG GYGG G Y G GG YG+ G G G
Sbjct: 502 SGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGGG---GGGGYGE-----RRGGGGGY 657
Query: 384 DSIAGATAGGG 394
G GG
Sbjct: 658 SRGGGGGGYGG 690
Score = 36.2 bits (82), Expect = 0.075
Identities = 18/35 (51%), Positives = 19/35 (53%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNG 359
G G GG G+ R G GGG GGYGG GY G
Sbjct: 604 GGGGGGGYGERRGGGGGYSRGGGGGGYGGGGYSRG 708
Score = 34.3 bits (77), Expect = 0.29
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHG-GYGGDGYYNGNFIEGG 365
G G GG G G Y E GGGGG+ G GG GY G + GG
Sbjct: 589 GGGGYGGGGGGGYGERR-GGGGGYSRGGGGGGYGGGGYSRGG 711
Score = 30.0 bits (66), Expect = 5.4
Identities = 25/70 (35%), Positives = 26/70 (36%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGND 384
G T + R G GGG G GGYGG G G G YG G G G
Sbjct: 463 GRNITVNQAQSRGSGGGGGGGRGGGGYGGGGGGYGGERRG---YGGGG-----GYGGGGG 618
Query: 385 SIAGATAGGG 394
G GGG
Sbjct: 619 GGYGERRGGG 648
>TC76561 similar to PIR|S71779|S71779 glycine-rich RNA-binding protein GRP1
- wheat, partial (95%)
Length = 1054
Score = 41.2 bits (95), Expect = 0.002
Identities = 29/71 (40%), Positives = 30/71 (41%)
Frame = +1
Query: 324 SGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGN 383
SG G GG G G Y G G GG GYGG G Y G GG YG+ G G G
Sbjct: 598 SGGGGGGGRGGGGYGGGGGGYGGERRGYGGGGGYGGG---GGGGYGE-----RRGGGGGY 753
Query: 384 DSIAGATAGGG 394
G GG
Sbjct: 754 SRGGGGGGYGG 786
Score = 36.2 bits (82), Expect = 0.075
Identities = 18/35 (51%), Positives = 19/35 (53%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNG 359
G G GG G+ R G GGG GGYGG GY G
Sbjct: 700 GGGGGGGYGERRGGGGGYSRGGGGGGYGGGGYSRG 804
Score = 34.3 bits (77), Expect = 0.29
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHG-GYGGDGYYNGNFIEGG 365
G G GG G G Y E GGGGG+ G GG GY G + GG
Sbjct: 685 GGGGYGGGGGGGYGERR-GGGGGYSRGGGGGGYGGGGYSRGG 807
Score = 30.0 bits (66), Expect = 5.4
Identities = 25/70 (35%), Positives = 26/70 (36%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGND 384
G T + R G GGG G GGYGG G G G YG G G G
Sbjct: 559 GRNITVNQAQSRGSGGGGGGGRGGGGYGGGGGGYGGERRG---YGGGG-----GYGGGGG 714
Query: 385 SIAGATAGGG 394
G GGG
Sbjct: 715 GGYGERRGGG 744
>TC87796 weakly similar to SP|P03211|EBN1_EBV EBNA-1 nuclear protein.
[strain B95-8 Human herpesvirus 4] {Epstein-barr
virus}, partial (23%)
Length = 431
Score = 40.8 bits (94), Expect = 0.003
Identities = 27/70 (38%), Positives = 29/70 (40%)
Frame = +1
Query: 464 GGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQGLPGKNGSIS 523
GG G GGGGGG G H + G T G GGG GGG G G G
Sbjct: 25 GGGGGSGGGGGGGAGGAH----GVGYGSGGGTGGGYGGGSPGGGGGGGGSGGGGGGGGAH 192
Query: 524 GKACPKGLYG 533
G A G+ G
Sbjct: 193 GGAYGGGIGG 222
Score = 36.6 bits (83), Expect = 0.058
Identities = 36/103 (34%), Positives = 40/103 (37%)
Frame = +1
Query: 436 GPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYIT 495
G GGG+GG G GG G SGGGGGGGG +H G Y
Sbjct: 91 GSGGGTGG-----------GYGGGSPGGGGGGGGSGGGGGGGG------AH---GGAY-- 204
Query: 496 LASVEGSIITGGGFGGGQGLPGKNGSISGKACPKGLYGIFCEE 538
GGG GGG+G G +G P G I C E
Sbjct: 205 ----------GGGIGGGEG--GGHGGYE----P*GFNAIQCYE 285
Score = 36.2 bits (82), Expect = 0.075
Identities = 27/77 (35%), Positives = 28/77 (36%)
Frame = +1
Query: 319 GVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELG 378
G G G GG G G G G GGG GG G G G GG+ G
Sbjct: 19 GYGGGGGSGGGGGGGAGGAHGVGYGSGGGTGGGYGGGSPGGGGGGGGS-----------G 165
Query: 379 SGSGNDSIAGATAGGGI 395
G G G GGGI
Sbjct: 166 GGGGGGGAHGGAYGGGI 216
Score = 32.3 bits (72), Expect = 1.1
Identities = 18/35 (51%), Positives = 20/35 (56%), Gaps = 2/35 (5%)
Frame = +1
Query: 324 SGLGCTGGLGKGRYFENGIGGG--GGHGGYGGDGY 356
SG G GG G + GIGGG GGHGGY G+
Sbjct: 160 SGGGGGGGGAHGGAYGGGIGGGEGGGHGGYEP*GF 264
Score = 32.3 bits (72), Expect = 1.1
Identities = 20/41 (48%), Positives = 20/41 (48%)
Frame = +1
Query: 325 GLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGG 365
G G GG G G G GGGG HGG G G G EGG
Sbjct: 121 GGGSPGGGGGGGGSGGGGGGGGAHGGAYGGGIGGG---EGG 234
Score = 32.0 bits (71), Expect = 1.4
Identities = 22/63 (34%), Positives = 25/63 (38%)
Frame = +1
Query: 331 GLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSGSGNDSIAGAT 390
G G + G G GGG GG G G + + GG T G G G G S G
Sbjct: 1 GRDHGGGYGGGGGSGGGGGG-GAGGAHGVGYGSGGGTGGGYGGGSPGGGGGGGGSGGGGG 177
Query: 391 AGG 393
GG
Sbjct: 178 GGG 186
Score = 31.6 bits (70), Expect = 1.9
Identities = 25/76 (32%), Positives = 29/76 (37%)
Frame = +1
Query: 318 SGVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCEL 377
SG G G G+G G G G GGG G GG G +G GG +G
Sbjct: 40 SGGGGGGGAGGAHGVGYGSGGGTGGGYGGGSPGGGGGGGGSGGGGGGGGAHG-------- 195
Query: 378 GSGSGNDSIAGATAGG 393
G+ I G GG
Sbjct: 196 --GAYGGGIGGGEGGG 237
Score = 29.6 bits (65), Expect = 7.1
Identities = 25/72 (34%), Positives = 27/72 (36%), Gaps = 5/72 (6%)
Frame = +1
Query: 467 GSPSGGGGGGGGRVHFHWSHIPVGDEYITLASVEGSIITGGGFGGGQ-----GLPGKNGS 521
G GGG GGGG G + S G TGGG+GGG G G G
Sbjct: 1 GRDHGGGYGGGGGSGGGGGGGAGGAHGVGYGSGGG---TGGGYGGGSPGGGGGGGGSGGG 171
Query: 522 ISGKACPKGLYG 533
G G YG
Sbjct: 172 GGGGGAHGGAYG 207
>TC80000 weakly similar to GP|15451136|gb|AAK96839.1 periaxin-like protein
{Arabidopsis thaliana}, partial (55%)
Length = 1033
Score = 40.4 bits (93), Expect = 0.004
Identities = 61/226 (26%), Positives = 88/226 (37%), Gaps = 19/226 (8%)
Frame = -2
Query: 318 SGVISASGLGCTGGLGKGRYFENGIGGG---GGHGGYGGDGYYNGNFIE--GGTTYGDVD 372
SG++ SGLG +G LG + +G+ G G G G G+ N ++ G G +
Sbjct: 924 SGILGNSGLGNSGTLGNSGFVNSGVLGNCGLGNSGILGNSGFGNSETLDSLGSCNSGALG 745
Query: 373 LPCELGSGS------GNDSIAGATAGG--GIIVMGSLEHSLTSLTLNGSLRSDGESFGDD 424
C SG+ GN G++ G GI+ +GS + ++G+L G
Sbjct: 744 NSCF*SSGTLGTSDLGNSGALGSSGFGNSGILNLGS-----SGFDISGTLGISG-----F 595
Query: 425 IRRQDGRTSSIGPGGGSGGTVLLFVQTLALGDS--SIISTVGGQGSPSGGGGGGGGRVHF 482
+ S+ G G G + TL LG S I T+G G + G G
Sbjct: 594 VNSGTLGCSNFGDSGILGSSGFDNSGTLNLGSSCFGISGTLGISGFGNSGTLGCSS---- 427
Query: 483 HWSHIPVGDEYITLASVEGSIIT----GGGFGGGQGLPGKNGSISG 524
+GD I +S G+ T GFG L N ISG
Sbjct: 426 ------LGDSVILGSSGLGNSGTLNLGSSGFGNSGTLGISNFGISG 307
>TC85605 similar to GP|437310|gb|AAA62850.1|| nodulin {Medicago truncatula},
partial (62%)
Length = 1077
Score = 40.0 bits (92), Expect = 0.005
Identities = 29/80 (36%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -3
Query: 317 YSGVISASGLGCTGGLGKGRYFENGIGGGGGH-GGYGGDGYYNGNFIEGGTTYGDVDLP- 374
Y+G S GL CTGG G G GG GG+ G Y G F GG G
Sbjct: 922 YTGGFSTCGL-CTGGFSTGGLCTGGFSTGGLFTGGFSTCGLYTGGFSTGGL*TGSFSTGG 746
Query: 375 -CELGSGSGNDSIAGATAGG 393
C G +G I G + GG
Sbjct: 745 LCTGGFSTGGLCIGGFSTGG 686
Score = 35.8 bits (81), Expect = 0.098
Identities = 28/82 (34%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Frame = -3
Query: 318 SGVISASGLGCTGGLGKGRYFENGIGGGGGH-GGYGGDGYYNGNF-----IEGGTTYGDV 371
+G S GL CTGG G G GG + GG+ DG G+F GG + GD+
Sbjct: 589 TGGFSTGGL-CTGGFSTGGL*SGGFSTGGLYTGGFSTDGL*TGSFSTSGLCTGGFSTGDL 413
Query: 372 DLPCELGSGSGNDSIAGATAGG 393
C G +G G + GG
Sbjct: 412 ---CTGGFSTGGLCTGGFSTGG 356
Score = 32.3 bits (72), Expect = 1.1
Identities = 25/77 (32%), Positives = 31/77 (39%), Gaps = 1/77 (1%)
Frame = -3
Query: 318 SGVISASGLGCTGGLGKGRYFENGIGGGGGH-GGYGGDGYYNGNFIEGGTTYGDVDLPCE 376
+G S GL C GG G G GG + GG+ DG G+F GG C
Sbjct: 739 TGGFSTGGL-CIGGFSTGGL*SGGFSTGGLYTGGFSIDGL*TGSFSTGGL--------CT 587
Query: 377 LGSGSGNDSIAGATAGG 393
G +G G + GG
Sbjct: 586 GGFSTGGLCTGGFSTGG 536
>TC93504 weakly similar to PIR|S46286|S46286 RNA-binding protein - wood
tobacco, partial (55%)
Length = 576
Score = 39.7 bits (91), Expect = 0.007
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = +3
Query: 311 RSVKVEYSGVISASGLGCTGGLGKGRYFENGIGGGGGHGGYGGDGYYNGNFIEGGTTYG 369
R+V+V Y+ + G G GG G G GG GG GGYGG G Y+G GG YG
Sbjct: 348 RTVRVNYATERARPGFG-GGGYGGG-------GGYGGGGGYGGGGGYSG----GGGNYG 488
Score = 30.8 bits (68), Expect = 3.2
Identities = 31/111 (27%), Positives = 40/111 (35%)
Frame = +3
Query: 368 YGDVDLPCELGSGSGNDSIAGATAGGGIIVMGSLEHSLTSLTLNGSLRSDGESFGDDIRR 427
YGDV L + D G + G G I + E + ++L + DG + R
Sbjct: 210 YGDV-----LDAKIIMDRDTGRSRGFGFITFATSEEASSALQAMDNKELDGRTV-----R 359
Query: 428 QDGRTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGG 478
+ T PG G GG GG G GGGG GGG
Sbjct: 360 VNYATERARPGFGGGG-------------------YGGGGGYGGGGGYGGG 455
>TC86690 similar to GP|6041851|gb|AAF02160.1| unknown protein {Arabidopsis
thaliana}, partial (63%)
Length = 1592
Score = 39.7 bits (91), Expect = 0.007
Identities = 25/73 (34%), Positives = 30/73 (40%), Gaps = 3/73 (4%)
Frame = +3
Query: 324 SGLGCTGGLGKGRY---FENGIGGGGGHGGYGGDGYYNGNFIEGGTTYGDVDLPCELGSG 380
S + G G G Y + G+GGG G G YGG G Y + GG G G G
Sbjct: 492 STMNYNSGYGSGMYGSSYGGGLGGGLGGGMYGGGGMYGNSMYRGGYGSGLYGSSGMYGGG 671
Query: 381 SGNDSIAGATAGG 393
+S G GG
Sbjct: 672 GMYNSGLGGPMGG 710
Score = 33.9 bits (76), Expect = 0.37
Identities = 29/102 (28%), Positives = 39/102 (37%), Gaps = 5/102 (4%)
Frame = +3
Query: 344 GGGGHGGYGGDGYYNGNFIEG--GTTYGDVDLPCELGSGSGNDSIAGATAGGGIIVMGSL 401
GGG GGYG YN + G G++YG LG G G G G + G
Sbjct: 465 GGGALGGYGSTMNYNSGYGSGMYGSSYGG-----GLGGGLGGGMYGGGGMYGNSMYRGGY 629
Query: 402 EHSL---TSLTLNGSLRSDGESFGDDIRRQDGRTSSIGPGGG 440
L + + G + + G G + G +GP GG
Sbjct: 630 GSGLYGSSGMYGGGGMYNSG--LGGPMGGMGGYGMGVGPYGG 749
Score = 29.3 bits (64), Expect = 9.2
Identities = 33/111 (29%), Positives = 42/111 (37%), Gaps = 5/111 (4%)
Frame = +3
Query: 428 QDGRTSSIGPGGGSGGTVLLFVQTLALGDSSIISTVGGQ-GSPSGGGGGGGGRVHFHWSH 486
Q+ T+S G GG GG G S+ GG G GGG GGG ++
Sbjct: 441 QNYGTNSYG-GGALGGYGSTMNYNSGYGSGMYGSSYGGGLGGGLGGGMYGGGGMY----- 602
Query: 487 IPVGDEYITLASVEGSIITGGGFGGG----QGLPGKNGSISGKACPKGLYG 533
G+ G + G +GGG GL G G + G G YG
Sbjct: 603 ---GNSMYRGGYGSGLYGSSGMYGGGGMYNSGLGGPMGGMGGYGMGVGPYG 746
>BQ143784 weakly similar to SP|P33485|VNUA Probable nuclear antigen. [strain
Kaplan PRV] {Pseudorabies virus}, partial (2%)
Length = 1022
Score = 38.9 bits (89), Expect = 0.012
Identities = 30/79 (37%), Positives = 35/79 (43%), Gaps = 1/79 (1%)
Frame = -2
Query: 437 PGGGSGGTVLLFVQTLALGDSSIISTVGGQGSPSGGGGGGGGRVHFHWSHIPVGDEYITL 496
PGGG V LF L G + VG GSP G GGGG V W+ P +
Sbjct: 313 PGGGGCPRVRLF---LGAGMEGVCFLVGCLGSPPPRGRGGGGSV---WAPRPAPPFRLVA 152
Query: 497 ASVE-GSIITGGGFGGGQG 514
V G + GGG GG+G
Sbjct: 151 VPVGWGGLRAGGGSCGGRG 95
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.320 0.140 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,802,526
Number of Sequences: 36976
Number of extensions: 656972
Number of successful extensions: 10087
Number of sequences better than 10.0: 206
Number of HSP's better than 10.0 without gapping: 4518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7380
length of query: 1162
length of database: 9,014,727
effective HSP length: 107
effective length of query: 1055
effective length of database: 5,058,295
effective search space: 5336501225
effective search space used: 5336501225
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Medicago: description of AC144766.10