TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144765.9 + phase: 0 
         (273 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC93732 homologue to OMNI|NT01MC2635 Integral membrane protein o...    37  0.011
AW687696 weakly similar to PIR|T49965|T499 hypothetical protein ...    29  2.2
TC84224 similar to GP|9758839|dbj|BAB09511.1 UDP-galactose trans...    28  2.9
TC85698 homologue to GP|7960247|gb|AAF71265.1| actin-like protei...    27  8.4
BF633384 similar to PIR|T46179|T46 hypothetical protein T8H10.30...    27  8.4

>TC93732 homologue to OMNI|NT01MC2635 Integral membrane protein of unknown
           function {Magnetococcus sp. MC-1}, partial (2%)
          Length = 443

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 27/89 (30%), Positives = 41/89 (45%), Gaps = 11/89 (12%)
 Frame = +2

Query: 17  NVCAKGGLLDTGSHYIQ-CWKQNERADPGWA------NSHDLYAIEQKFMENCALNYFDK 69
           N+  K GL   G  +IQ CW Q +  +  W       +S D   + Q   +N   N ++K
Sbjct: 176 NLDRKQGLSSRGHTHIQLCWWQRQCCESEWK*LQELLSSFDSTCVNQWARQNYNYNLWEK 355

Query: 70  ----NDYRSMMKFVRAFHSIDLKRGFLQS 94
                 YRS+ K+ +AFH+   K  +L S
Sbjct: 356 MVHFKCYRSLRKWTKAFHNCAAKTRWLVS 442


>AW687696 weakly similar to PIR|T49965|T499 hypothetical protein F8M21.190 -
           Arabidopsis thaliana, partial (16%)
          Length = 289

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 112 MEAAVNIAKTMGDILREADLLGKAGEFLDAYELV 145
           M    NI  T+       DLLG+AG F++AYEL+
Sbjct: 101 MNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELI 202


>TC84224 similar to GP|9758839|dbj|BAB09511.1 UDP-galactose transporter
           related protein-like {Arabidopsis thaliana}, partial
           (52%)
          Length = 798

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 15/42 (35%), Positives = 24/42 (56%), Gaps = 1/42 (2%)
 Frame = -3

Query: 17  NVCAKG-GLLDTGSHYIQCWKQNERADPGWANSHDLYAIEQK 57
           NVC +  G+L  GSH++QC+   ++   G +  HD  A  +K
Sbjct: 460 NVCYRHKGILINGSHWVQCFFTCQQRTSGNS*RHDAVAENKK 335


>TC85698 homologue to GP|7960247|gb|AAF71265.1| actin-like protein
           {Phalaenopsis sp. 'True Lady'}, partial (80%)
          Length = 1459

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 226 LCLWELLDSHFRLNSSKYVW 245
           L +W L DSH   N ++Y+W
Sbjct: 292 LRIWALCDSHHHQNQAQYLW 233


>BF633384 similar to PIR|T46179|T46 hypothetical protein T8H10.30 -
           Arabidopsis thaliana, partial (22%)
          Length = 595

 Score = 26.9 bits (58), Expect = 8.4
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 3/113 (2%)
 Frame = +1

Query: 112 MEAAVNIAKTMGDILREADLLGKAGEFLDAYELVFFY---VFAKSLWSGGSKAWPLKQFT 168
           M+A   I  T        DLLG++G+  +AY L+      +     WS    A  + Q  
Sbjct: 196 MKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNL 375

Query: 169 QKAGLLGKALTFAKEVSSSFYELASTKVELSNKHDNIFEIVNQLKSSRIHSSI 221
           +   +  K L       +S+Y L S     +   D   ++  ++K   +  ++
Sbjct: 376 EIGEIAAKNLFVLDPNVASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVRKNL 534


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.135    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,908,437
Number of Sequences: 36976
Number of extensions: 114663
Number of successful extensions: 669
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of query: 273
length of database: 9,014,727
effective HSP length: 95
effective length of query: 178
effective length of database: 5,502,007
effective search space: 979357246
effective search space used: 979357246
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)