BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144720.7 + phase: 2 /pseudo/partial
(1007 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BQ147964 similar to GP|7769862|gb F12M16.28 {Arabidopsis thalian... 379 e-119
TC83432 weakly similar to GP|7769862|gb|AAF69540.1| F12M16.28 {A... 170 2e-42
TC86205 similar to PIR|A86289|A86289 probable ABC transporter [i... 162 5e-40
TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20 ... 161 1e-39
TC84278 similar to PIR|T02567|T02567 probable ATP-binding casset... 141 1e-33
BE205528 similar to GP|12382006|d putative ABC transporter prote... 130 3e-30
TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Ar... 124 2e-28
TC81415 weakly similar to PIR|A84509|A84509 probable ABC transpo... 116 4e-26
AW685718 homologue to GP|20522008|d pleiotropic drug resistance ... 112 9e-25
BQ139036 similar to GP|14423315|g ATP-binding cassette transport... 111 1e-24
AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis t... 107 2e-23
TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transp... 106 4e-23
TC88124 weakly similar to PIR|T45888|T45888 ABC transporter-like... 94 2e-19
TC89547 similar to GP|12382007|dbj|BAB21276. putative ABC transp... 92 8e-19
AW560126 similar to GP|15292753|gb putative ABC transporter prot... 92 8e-19
TC93816 similar to GP|9279716|dbj|BAB01273.1 ABC transporter {Ar... 92 1e-18
TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC... 92 1e-18
TC86206 similar to GP|20522008|dbj|BAB92011. pleiotropic drug re... 91 2e-18
BQ138652 similar to GP|20522008|d pleiotropic drug resistance li... 88 1e-17
TC87925 similar to GP|13605495|gb|AAK32741.1 At1g65410/T8F5_19 {... 80 4e-15
>BQ147964 similar to GP|7769862|gb F12M16.28 {Arabidopsis thaliana}, partial
(15%)
Length = 698
Score = 379 bits (972), Expect(2) = e-119
Identities = 188/189 (99%), Positives = 188/189 (99%)
Frame = +1
Query: 673 SYQDLPVKWMLHNEYPIPLDMRQHAAQFGIPQSVNSANDLGEVGKTFAGELWNDVRSNVE 732
SYQDLPVKWMLHNEYPIPLDMRQHAAQFGIPQSVNSANDLGEVGKTFAGELWNDVRSNVE
Sbjct: 1 SYQDLPVKWMLHNEYPIPLDMRQHAAQFGIPQSVNSANDLGEVGKTFAGELWNDVRSNVE 180
Query: 733 LRGEKIRLNFLKSKDLSNRKTPGVFKQYKYFLIRVGKQRLREARIQAVDYLILLLAGACL 792
LRGEKIRLNFLKSKDLSNRKTPGVFKQYKYFLIRVGKQRLREARIQAVDYLILLLAGACL
Sbjct: 181 LRGEKIRLNFLKSKDLSNRKTPGVFKQYKYFLIRVGKQRLREARIQAVDYLILLLAGACL 360
Query: 793 GSITKSSDQTFGASGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKD 852
GSITKSSDQTFGASGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSL YFLSKD
Sbjct: 361 GSITKSSDQTFGASGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLTYFLSKD 540
Query: 853 TMDHFNTVI 861
TMDHFNTVI
Sbjct: 541 TMDHFNTVI 567
Score = 69.3 bits (168), Expect(2) = e-119
Identities = 34/44 (77%), Positives = 36/44 (81%)
Frame = +3
Query: 862 KPVVYLSMFYFLTNPRSTFTDNYIVLLCLVYCVTGIAYALSIVF 905
+P YLSMFYFLTNPRSTFTD + LLCL Y VTG AYALSIVF
Sbjct: 567 QPGGYLSMFYFLTNPRSTFTDTILXLLCLGYWVTGXAYALSIVF 698
>TC83432 weakly similar to GP|7769862|gb|AAF69540.1| F12M16.28 {Arabidopsis
thaliana}, partial (12%)
Length = 433
Score = 170 bits (431), Expect = 2e-42
Identities = 89/110 (80%), Positives = 94/110 (84%)
Frame = +1
Query: 883 NYIVLLCLVYCVTGIAYALSIVFEPGAAQLWSVLLPVVSTLIATQQKDSKILKAIANLCY 942
NYIVLL LVYCVTGIAYALSIVFEPGAAQLWSVLLPVVSTLIATQQKDSKILKAIANLCY
Sbjct: 103 NYIVLLWLVYCVTGIAYALSIVFEPGAAQLWSVLLPVVSTLIATQQKDSKILKAIANLCY 282
Query: 943 SKWALQALVIANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILILMGV 992
SKWALQALVIANAERYQGVWLITRCG K ++I+ ++GV
Sbjct: 283 SKWALQALVIANAERYQGVWLITRCGHF*K-----------VAIIFMIGV 399
Score = 65.1 bits (157), Expect = 1e-10
Identities = 32/42 (76%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +3
Query: 853 TMDHFNTVIKPVVYLSMFYFLTNPRSTFTD-NYIVLLCLVYC 893
TMDHFNTVIKPVVYLSMFYFLTNPRSTFT Y L + C
Sbjct: 12 TMDHFNTVIKPVVYLSMFYFLTNPRSTFTA*LYCAALACILC 137
Score = 52.8 bits (125), Expect = 7e-07
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +3
Query: 969 SLLKSGYNLHDWSLCISILILMGV 992
SLLKSGYNLHDWSLCISILILMGV
Sbjct: 360 SLLKSGYNLHDWSLCISILILMGV 431
>TC86205 similar to PIR|A86289|A86289 probable ABC transporter [imported] -
Arabidopsis thaliana, partial (52%)
Length = 2721
Score = 162 bits (411), Expect = 5e-40
Identities = 83/244 (34%), Positives = 149/244 (61%), Gaps = 6/244 (2%)
Frame = +1
Query: 422 ILRNVTGKIKPGRITAIMGPSGAGKTTFLSALAGKALGCLVTGSILINGRNESIHSFKKI 481
+L+ V+G +PG +TA+MG SGAGKTT + LAG+ G + G I ++G + +F +I
Sbjct: 760 LLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGDIKVSGYPKKQETFARI 939
Query: 482 IGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSVVGT 541
G+ Q+D+ ++TV E+L +SA RL + + + + ++ V++ + L S+RNS+VG
Sbjct: 940 SGYCEQNDIHSPHVTVYESLLYSAWLRLPSGVDSNTRKMFIDEVMDLVELNSLRNSLVGL 1119
Query: 542 VEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALRREALEGVNICM 601
G+S QRKR+ + +E+V PS++ +DEPTSGLD+ ++ +++R +R G +
Sbjct: 1120 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVC 1299
Query: 602 VVHQPSYALFNMFDDLILLGKGGLMVYHG----SAKKVEEYFSGL-GIN-VPERINPPDY 655
+HQPS +F FD+L L+ +GG +Y G + + +YF + G++ + + NP +
Sbjct: 1300 TIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSTHLIKYFESIDGVSKIKDGYNPATW 1479
Query: 656 YIDI 659
+++
Sbjct: 1480 MLEV 1491
>TC80149 similar to GP|22137204|gb|AAM91447.1 At2g01320/F10A8.20
{Arabidopsis thaliana}, partial (44%)
Length = 1366
Score = 161 bits (408), Expect = 1e-39
Identities = 84/244 (34%), Positives = 149/244 (60%), Gaps = 3/244 (1%)
Frame = +3
Query: 420 KHILRNVTGKIKPGRITAIMGPSGAGKTTFLSALAGKALGCL---VTGSILINGRNESIH 476
+ +L+N++G+ KPGR+ AIMGPSG+GKTT L+ LAG+ ++G + NG+ S +
Sbjct: 396 RFLLKNLSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSASPRLHLSGLLEFNGKPSSRN 575
Query: 477 SFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRN 536
++K +V Q+D+ LTV E L + + +L S E+ V ++ GL S +
Sbjct: 576 AYK--FAYVRQEDLFFSQLTVRETLSLAIELQLHNISSAEERDEYVNNLLFKTGLVSCAD 749
Query: 537 SVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALRREALEG 596
+ VG + RG+SGG++KR+++ E++ PS++ DEPT+GLD+ ++ ++ LR+ AL+G
Sbjct: 750 TNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLRQLALDG 929
Query: 597 VNICMVVHQPSYALFNMFDDLILLGKGGLMVYHGSAKKVEEYFSGLGINVPERINPPDYY 656
+ +HQP ++++ FDD++LL G L+ + + YFS G + P+ +NP ++
Sbjct: 930 HTVICSIHQPRGSVYSKFDDIVLLTDGSLVYAGPAGDEPLTYFSKFGYHCPDHVNPAEFL 1109
Query: 657 IDIL 660
D++
Sbjct: 1110ADLI 1121
>TC84278 similar to PIR|T02567|T02567 probable ATP-binding cassette protein
T16B24.1 - Arabidopsis thaliana, partial (28%)
Length = 835
Score = 141 bits (355), Expect = 1e-33
Identities = 73/179 (40%), Positives = 117/179 (64%), Gaps = 1/179 (0%)
Frame = +3
Query: 495 LTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKR 554
LTVEE L F+A+ RL LSK +K V+ +I+ LGL++ +V+G RGVSGG+R+R
Sbjct: 15 LTVEETLTFAAEFRLPRSLSKSKKNARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRR 194
Query: 555 VNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFNMF 614
V++G++++ +P +L LDEPTSGLDS S+ ++++ L+R A G + M +HQPSY + +
Sbjct: 195 VSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLL 374
Query: 615 DDLILLGKGGLMVYHGSAKKVEEYFSGLGINVPERINPPDYYIDILEGI-AAPGGSSGL 672
D +I L + G VY GS ++ YF+ G +PE N ++ +D++ + +PGG+ L
Sbjct: 375 DRMIFLSR-GQTVYSGSPSQLPSYFAEFGHPIPEGDNRTEFALDLIRELEGSPGGTKSL 548
>BE205528 similar to GP|12382006|d putative ABC transporter protein {Oryza
sativa (japonica cultivar-group)}, partial (14%)
Length = 617
Score = 130 bits (326), Expect = 3e-30
Identities = 68/204 (33%), Positives = 125/204 (60%), Gaps = 6/204 (2%)
Frame = +1
Query: 462 VTGSILINGRNESIHSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLV 521
+ G+I I+G + +F +I G+ Q+D+ +TV E+L +SA RLS D++ + +
Sbjct: 4 IGGNITISGFPKKQETFARISGYCEQNDIHSPYVTVYESLLYSAWLRLSPDINAETRKMF 183
Query: 522 VERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSAS 581
VE V+E + L+ ++N++VG G+S QRKR+ + +E+V PS++ +DEPTSGLD+ +
Sbjct: 184 VEEVMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 363
Query: 582 SQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVYHG----SAKKVEE 637
+ +++R +R G + +HQPS +F FD+L+LL +GG +Y G ++ +
Sbjct: 364 AAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGHNSSNLIN 543
Query: 638 YFSGL-GIN-VPERINPPDYYIDI 659
YF G+ G++ + + NP + +++
Sbjct: 544 YFEGIHGVSKIKDGYNPATWMLEV 615
>TC91754 similar to GP|20260310|gb|AAM13053.1 unknown protein {Arabidopsis
thaliana}, partial (25%)
Length = 663
Score = 124 bits (311), Expect = 2e-28
Identities = 70/177 (39%), Positives = 110/177 (61%), Gaps = 6/177 (3%)
Frame = +2
Query: 406 ISFRDLTLTL----KAQNKHILRNVTGKIKPGRITAIMGPSGAGKTTFLSALAGK-ALGC 460
+++ DL + L K K +L + G +PGRI AIMGPSG+GK+T L LAG+ A
Sbjct: 140 LAWEDLRVMLPNFGKGPTKRLLNGLNGFAEPGRIMAIMGPSGSGKSTLLDTLAGRLAKNV 319
Query: 461 LVTGSILINGRNESI-HSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKV 519
++TG++ +NG+ ++ + F + +V Q+DV+ G LTV+E + +SA RL + +SK E
Sbjct: 320 VMTGNVFLNGKKKTPGYGF---VAYVTQEDVLLGTLTVKETITYSAHLRLPSTMSKEEIN 490
Query: 520 LVVERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSG 576
+V+ I +GL + ++G G+SGG+RKR ++ LE++ P L LDEPTSG
Sbjct: 491 GLVDATIIEMGLHDCADRLIGNWHLXGISGGERKRTSIALEILTRPRXLFLDEPTSG 661
>TC81415 weakly similar to PIR|A84509|A84509 probable ABC transporter
[imported] - Arabidopsis thaliana, partial (13%)
Length = 702
Score = 116 bits (291), Expect = 4e-26
Identities = 75/183 (40%), Positives = 110/183 (59%), Gaps = 2/183 (1%)
Frame = +2
Query: 395 NTEKSKRPFIEISFRDLTLTLKAQNKHILRNVTGKIKPGRITAIMGPSGAGKTTFLSALA 454
N + P+ I F +LT K +IL++V+ + I A++GPSG GK+T L +A
Sbjct: 155 NLTYTLHPYKTIPFSFKSLTQKPHPVNILKSVSFVARTSEIVAVVGPSGTGKSTLLRIIA 334
Query: 455 GKALGC-LVTGSILINGRNESIHS-FKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSAD 512
G+ +I IN S S +KI GFV Q+D + LTV+E L F A+ RL +
Sbjct: 335 GRIKDKDFNPKTISINDHPMSTPSQLRKICGFVSQEDNLLPLLTVKETLLFGAKFRLK-E 511
Query: 513 LSKPEKVLVVERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDE 572
++ E+ L VE +++ LGL V +S VG E RGVSGG+RKRV++G++M+ P +L+LDE
Sbjct: 512 MTPKERELRVENLMQELGLFHVAHSFVGDDENRGVSGGERKRVSIGVDMIHNPPILVLDE 691
Query: 573 PTS 575
PTS
Sbjct: 692 PTS 700
>AW685718 homologue to GP|20522008|d pleiotropic drug resistance like protein
{Nicotiana tabacum}, partial (12%)
Length = 613
Score = 112 bits (279), Expect = 9e-25
Identities = 58/172 (33%), Positives = 105/172 (60%), Gaps = 6/172 (3%)
Frame = +2
Query: 494 NLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSVVGTVEKRGVSGGQRK 553
++TV E+L +SA RL AD+ + + +E V+E + L +RNS+VG G+S QRK
Sbjct: 11 HVTVYESLVYSAWLRLPADVDSNTRKMFIEEVMELVELNPLRNSLVGLPGVNGLSTEQRK 190
Query: 554 RVNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFNM 613
R+ + +E+V PS++ +DEPTSGLD+ ++ +++R +R G + +HQPS +F
Sbjct: 191 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA 370
Query: 614 FDDLILLGKGGLMVYHG----SAKKVEEYFSGL-GIN-VPERINPPDYYIDI 659
FD+L L+ +GG +Y G + ++ +YF + G++ + + NP + +++
Sbjct: 371 FDELFLMKRGGEEIYVGPLGRHSSQLIKYFESIEGVSKIKDGYNPATWMLEV 526
>BQ139036 similar to GP|14423315|g ATP-binding cassette transporter Atr5
{Mycosphaerella graminicola}, partial (14%)
Length = 673
Score = 111 bits (278), Expect = 1e-24
Identities = 77/236 (32%), Positives = 124/236 (51%), Gaps = 5/236 (2%)
Frame = +1
Query: 522 VERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLM-LDEPTSGLDSA 580
V+ +IE L L + ++++G V G+S QRKRV +G+E+V +PS+L+ LDEPTSGLD
Sbjct: 10 VDTIIELLELYDLEHTLIGRVGA-GLSVEQRKRVTIGVELVSKPSILIFLDEPTSGLDGQ 186
Query: 581 SSQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVYHG----SAKKVE 636
++ +R LR+ A G + + +HQPS LF FD L+LL KGG VY G + V+
Sbjct: 187 AAFNTVRFLRKLADVGQAVLVTIHQPSAQLFAQFDTLLLLAKGGKTVYFGEIGDNGDTVK 366
Query: 637 EYFSGLGINVPERINPPDYYIDILEGIAAPGGSSGLSYQDLPVKWMLHNEYPIPLDMRQH 696
EYF G+ P +NP ++ ID++ G A + +D W+ + P M+Q
Sbjct: 367 EYFDRNGVPCPRDVNPAEFMIDVVTGTHA-------NEKDWHQVWL---DSPEQAQMQQD 516
Query: 697 AAQFGIPQSVNSANDLGEVGKTFAGELWNDVRSNVELRGEKIRLNFLKSKDLSNRK 752
I + + G FA +W + ++L ++ ++ ++ D N K
Sbjct: 517 LEHI-INDAAGKEPGTTDDGHEFATTMW----TQIKLVTHRMNVSLYRNIDYVNNK 669
>AJ499813 similar to GP|9279716|db ABC transporter {Arabidopsis thaliana},
partial (13%)
Length = 573
Score = 107 bits (268), Expect = 2e-23
Identities = 55/157 (35%), Positives = 98/157 (62%), Gaps = 6/157 (3%)
Frame = -3
Query: 509 LSADLSKPEKVLVVERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLL 568
L ++ EK+ VE+V++ + LQS+++++VG G+S QRKR+ + +E+V PS++
Sbjct: 571 LPKEVGNEEKMQFVEQVMDLVELQSLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSII 392
Query: 569 MLDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVY 628
+DEPTSGLD+ ++ +++R +R G + +HQPS +F FD+LIL+ +GG +VY
Sbjct: 391 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELILMKRGGQLVY 212
Query: 629 HG----SAKKVEEYFSGL-GI-NVPERINPPDYYIDI 659
G ++ K+ EYF + G+ + E NP +++
Sbjct: 211 GGPLGRNSHKIIEYFEEIPGVPKIKEMYNPATRMLEV 101
>TC82289 similar to GP|12382007|dbj|BAB21276. putative ABC transporter
protein {Oryza sativa (japonica cultivar-group)},
partial (25%)
Length = 1108
Score = 106 bits (265), Expect = 4e-23
Identities = 60/204 (29%), Positives = 113/204 (54%), Gaps = 6/204 (2%)
Frame = +3
Query: 462 VTGSILINGRNESIHSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLV 521
+ G+I I+G + +F +I G+ Q+D R D++ + +
Sbjct: 3 ICGNITISGFPKKQETFARISGYCEQND------------------RHWPDINAETRKMF 128
Query: 522 VERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSAS 581
VE V+E + L+ ++N++VG G+S QRKR+ + +E+V PS++ +DEPTSGLD+ +
Sbjct: 129 VEEVMELVELKPLQNALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 308
Query: 582 SQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVYHG----SAKKVEE 637
+ +++R +R G + +HQPS +F FD+L+LL +GG +Y G ++ +
Sbjct: 309 AAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLLKQGGQEIYVGPLGHNSSNLIN 488
Query: 638 YFSGL-GIN-VPERINPPDYYIDI 659
YF G+ G++ + + NP + +++
Sbjct: 489 YFEGIHGVSKIKDGYNPATWMLEV 560
>TC88124 weakly similar to PIR|T45888|T45888 ABC transporter-like protein -
Arabidopsis thaliana, partial (27%)
Length = 1641
Score = 94.4 bits (233), Expect = 2e-19
Identities = 45/134 (33%), Positives = 84/134 (62%), Gaps = 6/134 (4%)
Frame = +3
Query: 531 LQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALR 590
L +++S+VG + G+S QRKR+ + +E+V PS++ +DEPTSGLD+ ++ +++RA++
Sbjct: 9 LDDIKDSLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVK 188
Query: 591 REALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVYHGS----AKKVEEYFSGL-GI- 644
G +HQPS +F FD+LIL+ GG ++Y+G+ + ++ EYF + G+
Sbjct: 189 NVVTTGRTTVCTIHQPSIDIFETFDELILMKSGGKIIYNGALGHHSSRLIEYFQSISGVP 368
Query: 645 NVPERINPPDYYID 658
+ + NP + ++
Sbjct: 369 KIKDNYNPATWMLE 410
>TC89547 similar to GP|12382007|dbj|BAB21276. putative ABC transporter
protein {Oryza sativa (japonica cultivar-group)},
partial (28%)
Length = 1283
Score = 92.4 bits (228), Expect = 8e-19
Identities = 90/359 (25%), Positives = 159/359 (44%), Gaps = 13/359 (3%)
Frame = +3
Query: 526 IEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSASSQLL 585
+E + L S+R ++VG + G+S QRKR+ + +E+V PS++ +DEPTSGLD+ ++ ++
Sbjct: 6 MELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 185
Query: 586 LRALRREALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVYHGSAKKVEEYFSGLGIN 645
+R +R G + +HQPS +F+ FD+L+L+ GG +Y G LG +
Sbjct: 186 MRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLMKLGGEQIYSGP----------LGRH 335
Query: 646 VPERINPPDYYIDILEGIAAPGGSSGLSYQDLPVKWMLHNEYPIPLDMRQHAAQFGIPQS 705
I +Y + +EG+ P G + P WML
Sbjct: 336 CAHLI----HYFEAIEGV--PKIKDGYN----PATWML---------------------E 422
Query: 706 VNSANDLGEVGKTFAGELWND--VRSNVELRGEKIRLNFLKSKDL--SNRKTPGVFKQYK 761
V SA + F N R N +L +++ + SK+L ++ T + Q K
Sbjct: 423 VTSAGSEANLKVNFTNVYRNSELYRRNKQLI-QELSIPPQDSKELYFDSQYTQTMLSQCK 599
Query: 762 YFLIRVGKQRLREARIQAVDYLILLLAGACLGSI-------TKSSDQTFGASGYTY-TVI 813
L + R AV L L G I + F A G Y +VI
Sbjct: 600 ACLWKQHLSYWRNTSYTAVRLLFTTLIAFLFGIIFWNIGLKRRKEQDLFNAMGSMYASVI 779
Query: 814 AVSLLCKIAALRSFSLDKLHYWRESDSGM-SSLAYFLSKDTMDHFNTVIKPVVYLSMFY 871
+ + + ++++ ++RE +GM S+L Y ++ ++ + +++ +VY + Y
Sbjct: 780 FIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYAAAQVIIELPHILVQTLVYGIIVY 956
>AW560126 similar to GP|15292753|gb putative ABC transporter protein
{Arabidopsis thaliana}, partial (17%)
Length = 727
Score = 92.4 bits (228), Expect = 8e-19
Identities = 52/123 (42%), Positives = 75/123 (60%)
Frame = +3
Query: 418 QNKHILRNVTGKIKPGRITAIMGPSGAGKTTFLSALAGKALGCLVTGSILINGRNESIHS 477
Q + IL NVTG PG I AI+GPSG+GK+T L++LAG+ +TG+IL N ++ +
Sbjct: 360 QERIILNNVTGIAYPGEILAILGPSGSGKSTLLNSLAGRLHTHNLTGTILANS-SKLDRT 536
Query: 478 FKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNS 537
+ GFV QDD+++ +LTV E L F + RL L++ KV E I LGL N+
Sbjct: 537 ILRRTGFVTQDDILYPHLTVRETLVFCSMLRLPRQLTRETKVAAAESAIAELGLTKCENT 716
Query: 538 VVG 540
++G
Sbjct: 717 IIG 725
>TC93816 similar to GP|9279716|dbj|BAB01273.1 ABC transporter {Arabidopsis
thaliana}, partial (16%)
Length = 743
Score = 92.0 bits (227), Expect = 1e-18
Identities = 43/128 (33%), Positives = 80/128 (61%), Gaps = 6/128 (4%)
Frame = +1
Query: 538 VVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALRREALEGV 597
+VG G+S QRKR+ + +E++ PS++ +DEPTSGLD+ ++ +++R +R G
Sbjct: 1 IVGLPGVTGLSTEQRKRLTIAVELIANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR 180
Query: 598 NICMVVHQPSYALFNMFDDLILLGKGGLMVYHG----SAKKVEEYFSGL-GI-NVPERIN 651
+ +HQPS +F FD+L+L+ +GG ++Y G ++ K+ EYF + G+ + E+ N
Sbjct: 181 TVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYN 360
Query: 652 PPDYYIDI 659
P + +++
Sbjct: 361 PATWMLEV 384
>TC81334 weakly similar to GP|19423992|gb|AAL87274.1 putative ABC
transporter protein {Arabidopsis thaliana}, partial
(29%)
Length = 977
Score = 91.7 bits (226), Expect = 1e-18
Identities = 60/159 (37%), Positives = 94/159 (58%), Gaps = 10/159 (6%)
Frame = +2
Query: 406 ISFRDLTLTLKA------QNKHILRNVTGKIKPGRITAIMGPSGAGKTTFLSALAGK-AL 458
++++DL +T+ A ++K IL+ +TG KP ++ AIMGPSG GK+T L ALAG+
Sbjct: 68 LTWKDLWVTVSASTGKTNESKSILQGLTGYAKPAQLLAIMGPSGCGKSTLLDALAGRLGS 247
Query: 459 GCLVTGSILINGRNESIHSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEK 518
+G ILING +++ +V QDD + LTV+E +++SAQ +L +S EK
Sbjct: 248 NTRQSGDILINGNKQALAYGTS--AYVTQDDTLLTTLTVKEAVYYSAQLQLPDTMSNEEK 421
Query: 519 VLVVERVIEFLGLQ---SVRNSVVGTVEKRGVSGGQRKR 554
+ I +GLQ + RN G + +G+SGGQ++R
Sbjct: 422 KERADFTIREMGLQDAINTRNRKGGVL--KGISGGQKRR 532
Score = 73.6 bits (179), Expect = 4e-13
Identities = 56/169 (33%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Frame = +3
Query: 496 TVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSVVGTV----EKRGVSGGQ 551
T++ N + QC + K E +L E+ + +QS + +G V E GV G+
Sbjct: 372 TIQLNFNYLTQCLMKR--KKKELILQ*EKWV--CKMQSTQE--IGRVGC*KE*VGVKKGE 533
Query: 552 RKRVNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALRR-EALEGVNICMV--VHQPSY 608
V++ +E++ P LL LDEPTSGLDSA+S +++ + + +G+ +V +HQPS
Sbjct: 534 ---VSISIEILTRPRLLFLDEPTSGLDSAASYYVMKRIASLDKKDGIQRTIVASIHQPST 704
Query: 609 ALFNMFDDLILLGKGGLMVYHGSAKKVEEYFSGLGINVPERINPPDYYI 657
+F +F +L LL G VY G A E+F+ G P NP D+ +
Sbjct: 705 EVFQLFHNLCLL-SSGKTVYFGPASAASEFFASNGFPCPPLQNPSDHLL 848
>TC86206 similar to GP|20522008|dbj|BAB92011. pleiotropic drug resistance
like protein {Nicotiana tabacum}, partial (11%)
Length = 757
Score = 91.3 bits (225), Expect = 2e-18
Identities = 47/130 (36%), Positives = 80/130 (61%)
Frame = +3
Query: 422 ILRNVTGKIKPGRITAIMGPSGAGKTTFLSALAGKALGCLVTGSILINGRNESIHSFKKI 481
+L+ V+G +PG +TA+MG SGAGKTT + LAG+ G + G I ++G + +F +I
Sbjct: 333 LLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGDIKVSGYPKKQETFARI 512
Query: 482 IGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSVVGT 541
G+ Q+D+ ++TV E+L +SA RL + + + + +E V++ + L S+R+S+VG
Sbjct: 513 SGYCEQNDIHSPHVTVYESLLYSAWLRLPSGVDSNTRKMFIEEVMDLVELNSLRDSLVGL 692
Query: 542 VEKRGVSGGQ 551
G+S Q
Sbjct: 693 PGVSGLSTEQ 722
>BQ138652 similar to GP|20522008|d pleiotropic drug resistance like protein
{Nicotiana tabacum}, partial (15%)
Length = 670
Score = 88.2 bits (217), Expect = 1e-17
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 33/204 (16%)
Frame = +2
Query: 489 DVVHGNLTVEENLWFSAQCR-------LSADLSKPEKV---------------------- 519
D+ G +TV E L FSA+ + L A+LS+ EK
Sbjct: 2 DLHIGEMTVRETLAFSARVQGVGPRYDLLAELSRREKHANIMPDPDIDVYMKAIATEGQK 181
Query: 520 --LVVERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGL 577
L+ + V+ LGL+ ++VVG RG+SGGQ+KRV G +V L +DE ++GL
Sbjct: 182 ANLITDYVLRILGLEICADTVVGNAMLRGISGGQKKRVTTGEMLVGPAKALFMDEISTGL 361
Query: 578 DSASSQLLLRALRR--EALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVYHGSAKKV 635
DS+++ ++ ++++ L+G + ++ QP +N+FDD+ILL + +Y G + V
Sbjct: 362 DSSTTFQIVNSMKQFVHILKGTAVISLL-QPPPETYNLFDDIILLSDSHI-IYQGPREHV 535
Query: 636 EEYFSGLGINVPERINPPDYYIDI 659
E+F +G P+R D+ ++
Sbjct: 536 LEFFESIGFKCPDRKGVADFLQEV 607
>TC87925 similar to GP|13605495|gb|AAK32741.1 At1g65410/T8F5_19 {Arabidopsis
thaliana}, partial (82%)
Length = 1699
Score = 80.1 bits (196), Expect = 4e-15
Identities = 73/231 (31%), Positives = 113/231 (48%), Gaps = 24/231 (10%)
Frame = +1
Query: 420 KHILRNVTGKIKPGRITAIMGPSGAGKTTFLSALAGKALGCLVTGSILINGRN-ESIHSF 478
K IL V+ KI+ G I+GPSG GK+T L +AG L G + I GR + + S
Sbjct: 502 KKILNGVSFKIRHGEAVGIIGPSGTGKSTILKIIAG--LLAPDKGEVYIRGRKRDGLISD 675
Query: 479 KKI----IGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVL--VVERVIEFLGLQ 532
+I IG V Q + +LTV EN+ F L S PE+ + +V+ + +GL+
Sbjct: 676 DEISGLRIGLVFQSAALFDSLTVRENVGFL----LYEHSSMPEEEISELVKETLAAVGLK 843
Query: 533 SVRNSVVGTVEKRGVSGGQRKRVNVGLEMV-------MEPSLLMLDEPTSGLDSASSQLL 585
V N + + SGG +KRV + ++ +EP +L+ DEPT+GLD +S ++
Sbjct: 844 GVENRLPSEL-----SGGMKKRVALARSIIFDTTKDSIEPEVLLYDEPTAGLDPIASTVV 1008
Query: 586 LRALRREALEG----------VNICMVVHQPSYALFNMFDDLILLGKGGLM 626
+R ++G + +V HQ S + D L+ L KG L+
Sbjct: 1009EDLIRSVHIKGRDALGKPGNISSYVVVTHQHS-TIKRAIDRLLFLHKGKLV 1158
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.326 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,546,195
Number of Sequences: 36976
Number of extensions: 487937
Number of successful extensions: 3276
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 2394
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 807
Number of HSP's gapped (non-prelim): 2578
length of query: 1007
length of database: 9,014,727
effective HSP length: 106
effective length of query: 901
effective length of database: 5,095,271
effective search space: 4590839171
effective search space used: 4590839171
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC144720.7