BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144657.9 + phase: 0
(398 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC93121 weakly similar to GP|8953375|emb|CAB96648.1 putative pro... 400 e-128
TC78599 similar to GP|9758008|dbj|BAB08605.1 contains similarity... 357 e-108
TC83137 similar to GP|9758523|dbj|BAB08970.1 contains similarity... 226 9e-60
TC82546 similar to PIR|T04446|T04446 hypothetical protein F4D11.... 178 4e-45
TC88262 homologue to GP|15293111|gb|AAK93666.1 unknown protein {... 140 4e-40
TC92412 weakly similar to GP|15146187|gb|AAK83577.1 AT5g33290/F1... 99 5e-38
BF519729 similar to PIR|T04446|T044 hypothetical protein F4D11.1... 92 5e-19
BG584638 similar to PIR|T47480|T47 hypothetical protein F18N11.1... 80 1e-15
TC89251 similar to PIR|H84680|H84680 hypothetical protein At2g28... 77 9e-15
BI272832 similar to GP|18650643|gb At1g21480/F24J8_23 {Arabidops... 66 3e-11
TC89741 similar to PIR|T06757|T06757 hypothetical protein F15B8.... 58 7e-09
BE204106 homologue to GP|15809826|gb AT5g61840/mac9_140 {Arabido... 55 6e-08
TC93084 similar to PIR|H86466|H86466 protein F23M19.7 [imported]... 54 1e-07
TC79742 similar to GP|10177241|dbj|BAB10615. gb|AAC98455.1~gene_... 42 5e-04
TC90643 weakly similar to GP|19386797|dbj|BAB86176. hypothetical... 36 0.023
TC86908 similar to PIR|G96708|G96708 hypothetical protein T26J14... 35 0.066
TC91789 weakly similar to GP|19386797|dbj|BAB86176. hypothetical... 33 0.19
CB894770 homologue to GP|4512698|gb| unknown protein {Arabidopsi... 32 0.56
TC87607 similar to SP|Q9ZTS1|SYM_ORYSA Probable methionyl-tRNA s... 30 1.6
TC87608 similar to GP|13940612|gb|AAK50414.1 Putative methionyl-... 30 1.6
>TC93121 weakly similar to GP|8953375|emb|CAB96648.1 putative protein
{Arabidopsis thaliana}, partial (27%)
Length = 918
Score = 400 bits (1028), Expect(3) = e-128
Identities = 192/193 (99%), Positives = 192/193 (99%)
Frame = +1
Query: 1 MTSLEKIEEDLAQTRALIQRAIRSKKSTTNMKQSFVPKGSIYLNPHAFHQSHKEMVKRFK 60
MTSLEKIEEDLAQTRALIQRAIRSKKSTTNMKQSFVPKGSIYLNPHAFHQSHKEMVKRFK
Sbjct: 205 MTSLEKIEEDLAQTRALIQRAIRSKKSTTNMKQSFVPKGSIYLNPHAFHQSHKEMVKRFK 384
Query: 61 VWVYKEGEQPLVHDGPVNNKYSIEGQFIDEMDTSNKSPFKATHPELAHVFFLPFSVSKVI 120
VWVYKEGEQPLVHDGPVNNKYSIEGQFIDEMDTSNKSPFKATHPELAHVFFLPFSVSKVI
Sbjct: 385 VWVYKEGEQPLVHDGPVNNKYSIEGQFIDEMDTSNKSPFKATHPELAHVFFLPFSVSKVI 564
Query: 121 RYVYKPRKSRSDYNPHRLQLLVEDYIKIVANKYPYWNISQGADHFLLSCHDWGPRVSYAN 180
RYVYKPRKSRSDYNPHRLQLLVEDYIKIVANKYPYWNISQGAD FLLSCHDWGPRVSYAN
Sbjct: 565 RYVYKPRKSRSDYNPHRLQLLVEDYIKIVANKYPYWNISQGADQFLLSCHDWGPRVSYAN 744
Query: 181 PKLFKHFIRALCN 193
PKLFKHFIRALCN
Sbjct: 745 PKLFKHFIRALCN 783
Score = 74.3 bits (181), Expect(3) = e-128
Identities = 34/37 (91%), Positives = 34/37 (91%)
Frame = +3
Query: 200 FWPNRDVSIPQLNLPVGKLGPPNTDQHPNNRTILTFF 236
F PNRDVSIPQLNLP KLGPPNTDQHPNNRTILTFF
Sbjct: 804 FGPNRDVSIPQLNLPGWKLGPPNTDQHPNNRTILTFF 914
Score = 25.4 bits (54), Expect(3) = e-128
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 194 ANTSEGFWP 202
ANTSEGFWP
Sbjct: 785 ANTSEGFWP 811
>TC78599 similar to GP|9758008|dbj|BAB08605.1 contains similarity to
limonene cyclase~gene_id:MED24.9 {Arabidopsis thaliana},
partial (85%)
Length = 1857
Score = 357 bits (916), Expect(2) = e-108
Identities = 169/308 (54%), Positives = 226/308 (72%)
Frame = +3
Query: 84 EGQFIDEMDTSNKSPFKATHPELAHVFFLPFSVSKVIRYVYKPRKSRSDYNPHRLQLLVE 143
+G FI ++ +++ F+ PE AHVFFLPFSV+K++++VY + D++P ++ +
Sbjct: 693 KGNFIHAIEMNDR--FRTRDPEKAHVFFLPFSVAKMVQFVYV--RDSHDFSP--IRKTIT 854
Query: 144 DYIKIVANKYPYWNISQGADHFLLSCHDWGPRVSYANPKLFKHFIRALCNANTSEGFWPN 203
DYI +V+ KYP+WN S GADHF+LSCHDWGP S + P L+K+ IRALCNANTSEGF P
Sbjct: 855 DYINVVSEKYPFWNRSLGADHFMLSCHDWGPETSKSVPNLYKNSIRALCNANTSEGFKPA 1034
Query: 204 RDVSIPQLNLPVGKLGPPNTDQHPNNRTILTFFAGGAHGKIRKKLLKSWKDKDEEVQVHE 263
+DVSIP+ NL G + P+ R++L FFAGG HG +R LL+ W+ KDE++QVH+
Sbjct: 1035KDVSIPETNLQTGTIHGIVGGPSPSKRSVLAFFAGGVHGPVRPVLLEHWEHKDEDLQVHK 1214
Query: 264 YLPKGQDYTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQ 323
YLPKG Y ++ SKFCLCPSG+EVASPRVVEAIY GCVPV+I D+Y PFSDVLNW
Sbjct: 1215YLPKGVSYYDMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKS 1394
Query: 324 FSMEIAVDRIPEIKTILQNITETKYRVLYSNVRRVRKHFEMNRPAKPFDLIHMILHSVWL 383
FS+E++V+ IP +K IL +I+ +Y + V +VR+HFE++ P FD+ HMILHS+WL
Sbjct: 1395FSVEVSVNDIPNLKKILTSISPRQYIRMQRRVGQVRRHFEVHSPPTRFDVFHMILHSIWL 1574
Query: 384 RRLNFRLH 391
RRLNFRLH
Sbjct: 1575RRLNFRLH 1598
Score = 53.9 bits (128), Expect(2) = e-108
Identities = 28/63 (44%), Positives = 45/63 (70%)
Frame = +1
Query: 4 LEKIEEDLAQTRALIQRAIRSKKSTTNMKQSFVPKGSIYLNPHAFHQSHKEMVKRFKVWV 63
L++ E L Q RA I++A R++ T ++ +VP G +Y NP++FH+S+ EM K+FKV+V
Sbjct: 460 LDRTEAGLLQARAAIRKA-RNENRTQDI--DYVPTGPMYHNPNSFHRSYLEMEKQFKVFV 630
Query: 64 YKE 66
Y+E
Sbjct: 631 YEE 639
>TC83137 similar to GP|9758523|dbj|BAB08970.1 contains similarity to
limonene cyclase~gene_id:K15O15.2 {Arabidopsis
thaliana}, partial (50%)
Length = 994
Score = 226 bits (577), Expect = 9e-60
Identities = 123/340 (36%), Positives = 198/340 (58%), Gaps = 9/340 (2%)
Frame = +2
Query: 15 RALIQRAIRSKKSTTNMKQSFVPKGSIYLNPHAFHQSHKEMVKRFKVWVYKEGEQPLVHD 74
R L+ I + + +K S + +Y F +S++ M ++ KV++Y+EGE+P+ H
Sbjct: 32 RELLAAKIEIENANVLLKSSGL-HAPVYREVSKFSRSYELMERKLKVYIYREGEKPIFHQ 208
Query: 75 GPVNNKYSIEGQFIDEMDTSNKSPFKATHPELAHVFFLPFSVSKVIRYVYKPRKSRSDYN 134
+ Y+ EG F+ M+ + + F P+ AH+F+LPFS S+++R K Y
Sbjct: 209 PKMRGIYASEGWFMKLMEGNKR--FIVKDPKKAHLFYLPFS-SQMLRANLSDNKKMEQY- 376
Query: 135 PHRLQLLVEDYIKIVANKYPYWNISQGADHFLLSCHDWGPRVSYANPKLFKHFIRALCNA 194
++ Y+ I+A KY +WN + GADHFL++CHDW R++ + K+ IR+LCNA
Sbjct: 377 -------LDKYVNIIAGKYRFWNRTGGADHFLVACHDWASRITR---QPMKNCIRSLCNA 526
Query: 195 NTSEGFWPNRDVSIPQLNL-----PVGKLGPPNTDQHPNNRTILTFFAGGAHGKIRKKLL 249
N ++GF +D ++P + P+ K+ +HP+ RTIL FFAG HG +R LL
Sbjct: 527 NVAKGFQIGKDTTLPATYIHSVMNPLRKIA----GKHPSERTILAFFAGSMHGYLRPILL 694
Query: 250 KSWKDKDEEVQVHEYLPKGQD----YTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPV 305
K W++K+ ++++ + + + Y M SK+C+C G+EV SPR+VEAI++ CVPV
Sbjct: 695 KHWENKEPDMKIFGAMARDAEGKRIYMDYMNSSKYCICARGYEVYSPRIVEAIFSECVPV 874
Query: 306 IICDNYSLPFSDVLNWSQFSMEIAVDRIPEIKTILQNITE 345
II DNY PF +VL W FS+ + +P + +IL +ITE
Sbjct: 875 IISDNYVPPFFEVLKWEAFSVFVRERDVPNLXSILLSITE 994
>TC82546 similar to PIR|T04446|T04446 hypothetical protein F4D11.10 -
Arabidopsis thaliana, partial (35%)
Length = 760
Score = 178 bits (451), Expect = 4e-45
Identities = 101/263 (38%), Positives = 154/263 (58%), Gaps = 7/263 (2%)
Frame = +1
Query: 69 QPLVHDGPVNNKYSIEGQFIDEMDTSNKSPFKATHPELAHVFFLPFSVSKVIRYVYKPRK 128
+P+ H + Y+ EG F+ M+ + + F +P+ AH+F+LPFS S+++ +
Sbjct: 7 RPISHSPFLTGIYASEGWFMKLMEANKR--FVTKNPKKAHLFYLPFS-SRMLEEALYVKN 177
Query: 129 SRSDYNPHRLQLLVEDYIKIVANKYPYWNISQGADHFLLSCHDWGPRVSYANPKL-FKHF 187
S S N L + DY+ ++A ++ +WN + GADHFL+ CHDW P + KL +
Sbjct: 178 SHSHKN---LIQYLHDYVDMIAARHSFWNRTGGADHFLVGCHDWAP----SETKLRLANC 336
Query: 188 IRALCNANTSEGFWPNRDVSIPQLNLPVGKLGPPNTDQHPNN---RTILTFFAGGAHGKI 244
IR+LCNA+ EGF +D S+P+ + ++ P D N+ +T L FFAG HG +
Sbjct: 337 IRSLCNADVKEGFVFGKDASLPETYVRNAQI--PTRDLGGNSFSKKTTLAFFAGSMHGYV 510
Query: 245 RKKLLKSWKDKDEEVQVHEYLPKGQ---DYTKLMGLSKFCLCPSGHEVASPRVVEAIYAG 301
R LLK W++KD ++++ LP + +Y M SK+C+C G+EV SPRVVEAI+
Sbjct: 511 RPILLKHWENKDPDMKIFGKLPNSKGNSNYIHYMKSSKYCICAKGYEVNSPRVVEAIFYE 690
Query: 302 CVPVIICDNYSLPFSDVLNWSQF 324
CVPVII DN+ F +VL+W F
Sbjct: 691 CVPVIISDNFVPAFFEVLDWESF 759
>TC88262 homologue to GP|15293111|gb|AAK93666.1 unknown protein {Arabidopsis
thaliana}, partial (66%)
Length = 1367
Score = 140 bits (354), Expect(2) = 4e-40
Identities = 77/221 (34%), Positives = 124/221 (55%), Gaps = 2/221 (0%)
Frame = +2
Query: 39 GSIYLNPHAFHQSHKEMVKRFKVWVYKEGEQPLVHDGP--VNNKYSIEGQFIDEMDTSNK 96
G +Y +P F + EM K+FKV++Y +G+ + P + KY+ EG F + +
Sbjct: 347 GDVYHSPRVFKLNFAEMEKKFKVYIYPDGDSKTFYQTPRKLTGKYASEGYFFQNI---RE 517
Query: 97 SPFKATHPELAHVFFLPFSVSKVIRYVYKPRKSRSDYNPHRLQLLVEDYIKIVANKYPYW 156
S F+ P+ AH+FF+P S K+ R + Y+ + ++V++Y++ + +KYPYW
Sbjct: 518 SRFRTLDPDEAHLFFIPISCHKM-------RGKGTSYD--NMTIIVQNYVESLISKYPYW 670
Query: 157 NISQGADHFLLSCHDWGPRVSYANPKLFKHFIRALCNANTSEGFWPNRDVSIPQLNLPVG 216
N + GADHF ++CHD G R + P L K+ IRA+C+ + GF P++DV++PQ+ P
Sbjct: 671 NRTLGADHFFVTCHDVGVRATEGLPLLVKNSIRAVCSPSYDVGFIPHKDVALPQVLQP-- 844
Query: 217 KLGPPNTDQHPNNRTILTFFAGGAHGKIRKKLLKSWKDKDE 257
P NRT L F+AG + KIR L + W++ E
Sbjct: 845 -FALPAGGNDVENRTSLGFWAGHRNSKIRVILARVWENDTE 964
Score = 42.0 bits (97), Expect(2) = 4e-40
Identities = 18/44 (40%), Positives = 28/44 (62%)
Frame = +3
Query: 271 YTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLP 314
Y K +KFC+CP G +V S R+ ++I+ GC+P D+ +LP
Sbjct: 1014 YQKRFYSTKFCICPGGSQVNSARIADSIHYGCIP----DSETLP 1133
Score = 35.4 bits (80), Expect = 0.039
Identities = 11/27 (40%), Positives = 19/27 (69%)
Frame = +1
Query: 358 VRKHFEMNRPAKPFDLIHMILHSVWLR 384
++KHF+ N P +D HM+++ +WLR
Sbjct: 1117 IQKHFQWNSPPVRYDAFHMVMYDLWLR 1197
>TC92412 weakly similar to GP|15146187|gb|AAK83577.1 AT5g33290/F19N2_10
{Arabidopsis thaliana}, partial (17%)
Length = 540
Score = 98.6 bits (244), Expect(2) = 5e-38
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 354 NVRRVRKHFEMNRPAKPFDLIHMILHSVWLRRLNFRLHLKQMYPS 398
NVRRVRKHFEMNRPAKPFDLIHMILHSVWLRRLNFRLHLKQMYPS
Sbjct: 127 NVRRVRKHFEMNRPAKPFDLIHMILHSVWLRRLNFRLHLKQMYPS 261
Score = 77.4 bits (189), Expect(2) = 5e-38
Identities = 40/50 (80%), Positives = 42/50 (84%)
Frame = +3
Query: 313 LPFSDVLNWSQFSMEIAVDRIPEIKTILQNITETKYRVLYSNVRRVRKHF 362
LPFSD +N SQFSMEIAVDRIPEIKTILQNITETKYRVLYS +K F
Sbjct: 3 LPFSDGVNGSQFSMEIAVDRIPEIKTILQNITETKYRVLYSKC*TCKKAF 152
>BF519729 similar to PIR|T04446|T044 hypothetical protein F4D11.10 -
Arabidopsis thaliana, partial (15%)
Length = 536
Score = 91.7 bits (226), Expect = 5e-19
Identities = 45/98 (45%), Positives = 64/98 (64%)
Frame = +3
Query: 297 AIYAGCVPVIICDNYSLPFSDVLNWSQFSMEIAVDRIPEIKTILQNITETKYRVLYSNVR 356
AI+ CVPVII DN+ PF +VLNW FS+ +A IP +K IL ++ E KY L VR
Sbjct: 3 AIFYECVPVIISDNFVPPFFEVLNWDSFSLILAEKDIPNLKQILLSVPEEKYLKLQLGVR 182
Query: 357 RVRKHFEMNRPAKPFDLIHMILHSVWLRRLNFRLHLKQ 394
RV+KHF + +DL HM LHS+W R+ F++++++
Sbjct: 183 RVQKHFLWHTKPLKYDLFHMTLHSIWYNRV-FQINVRK 293
>BG584638 similar to PIR|T47480|T47 hypothetical protein F18N11.160 -
Arabidopsis thaliana, partial (23%)
Length = 758
Score = 80.1 bits (196), Expect = 1e-15
Identities = 44/127 (34%), Positives = 73/127 (56%), Gaps = 5/127 (3%)
Frame = -2
Query: 275 MGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQFSMEI-AVDRI 333
M +SKFCL +G +S R+ +AI + CVPVII D LPF DVL++S+FS+ + A D +
Sbjct: 676 MSMSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFSVFVRAADAV 497
Query: 334 PE--IKTILQNITETKYRVLYSNVRRVRKHFEMNRPAKPFDLIHMILHSV--WLRRLNFR 389
+ + +L +I ++ ++ ++ + HFE P++P D ++MI V + + F
Sbjct: 496 KKGYLLNLLHSIKREEWTKMWERLKEITNHFEYQYPSQPGDAVNMIWQEVARKISSMQFN 317
Query: 390 LHLKQMY 396
H K Y
Sbjct: 316 SHRKNRY 296
>TC89251 similar to PIR|H84680|H84680 hypothetical protein At2g28110
[imported] - Arabidopsis thaliana, partial (30%)
Length = 923
Score = 77.4 bits (189), Expect = 9e-15
Identities = 41/113 (36%), Positives = 59/113 (51%), Gaps = 2/113 (1%)
Frame = +1
Query: 271 YTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQFSMEIAV 330
Y + S FCLCP G SPR+VE++ GCVPVII D+ LPFS +NW + S+ +A
Sbjct: 103 YQSEIARSVFCLCPLGWAPWSPRLVESVALGCVPVIIADSIRLPFSSAVNWPEISVTVAE 282
Query: 331 DRIPEIKTILQNITETKYRVLYSNV--RRVRKHFEMNRPAKPFDLIHMILHSV 381
+ + IL+ + T ++ N+ R RK N D +LHS+
Sbjct: 283 KDVWRLGEILEKVAATNLSIIQRNLWDPRTRKALLFNSRVHEGDATWQVLHSL 441
>BI272832 similar to GP|18650643|gb At1g21480/F24J8_23 {Arabidopsis
thaliana}, partial (42%)
Length = 607
Score = 65.9 bits (159), Expect = 3e-11
Identities = 46/154 (29%), Positives = 78/154 (49%), Gaps = 8/154 (5%)
Frame = +3
Query: 233 LTFFAGGAHGKI-RKKLLKSWKDKDEEVQVHEYLPKG------QDYTKLMGLSKFCLCPS 285
L + G A GK R +L++ K E+++ + G +DY + + SKFCL P
Sbjct: 9 LANYLGRAQGKAGRLQLIELSKQFPEKLECPDLKFSGGEKLGRKDYFEHLRNSKFCLAPR 188
Query: 286 GHEVASPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQFSMEIAVDRI-PEIKTILQNIT 344
G + R E+ + CVPVI+ D LPF +V+++SQ S++ RI PE+ L++I
Sbjct: 189 GESSWTLRFYESFFVECVPVILSDQIELPFQNVIDYSQISIKWPSSRIGPELLQYLESIP 368
Query: 345 ETKYRVLYSNVRRVRKHFEMNRPAKPFDLIHMIL 378
+ + + R+VR + +KP + I+
Sbjct: 369 DKDIEAIIARGRQVRCMWVYASDSKPCSAMRGIM 470
>TC89741 similar to PIR|T06757|T06757 hypothetical protein F15B8.180 -
Arabidopsis thaliana, partial (32%)
Length = 1233
Score = 57.8 bits (138), Expect = 7e-09
Identities = 25/72 (34%), Positives = 45/72 (61%)
Frame = +1
Query: 291 SPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQFSMEIAVDRIPEIKTILQNITETKYRV 350
S R+ +++ GC+PV+I D LP+ +VLN+ F++ I D IP + IL+ ET+ +
Sbjct: 523 SGRMEDSVLQGCIPVVIQDGIFLPYENVLNYDSFAVRIPEDEIPNMIKILRGFNETEINL 702
Query: 351 LYSNVRRVRKHF 362
+NV+++ + F
Sbjct: 703 KLANVQKIWQRF 738
>BE204106 homologue to GP|15809826|gb AT5g61840/mac9_140 {Arabidopsis
thaliana}, partial (44%)
Length = 555
Score = 54.7 bits (130), Expect = 6e-08
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 20/163 (12%)
Frame = +2
Query: 96 KSPFKATHPELAHVFFLPFSVSKVIR--------YVYKPRKSRSDYNPHRLQL------L 141
K P TH A F F +S +R + Y P + D P+ L L +
Sbjct: 41 KDPRCLTHMFAAERFMHRFLLSSAVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRM 220
Query: 142 VEDYIKIVANKYPYWNISQGADHFLLSCHDWGPRVSYANPKLFKHFIRALC-NANTSEGF 200
+ I+++++ +PYWN ++GADHF + HD+G Y K + I L A + F
Sbjct: 221 MRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLRRATLVQTF 400
Query: 201 WPNRDVSIPQLNLPVGKLGPP---NTDQHPNN--RTILTFFAG 238
V + ++ + PP +T P+ R+I +F G
Sbjct: 401 GQRNHVCLKDGSITIPAYAPPQKMHTHLIPDKTPRSIFVYFRG 529
>TC93084 similar to PIR|H86466|H86466 protein F23M19.7 [imported] -
Arabidopsis thaliana, partial (46%)
Length = 676
Score = 53.5 bits (127), Expect = 1e-07
Identities = 64/233 (27%), Positives = 96/233 (40%), Gaps = 26/233 (11%)
Frame = +3
Query: 109 VFFLPFSVS-------KVIRYVYKPRKSRSDYNPHRLQLLVEDYIKIVANKYPYWNISQG 161
V F+PF + + + V++ + DY + Q V D++K K WN S G
Sbjct: 6 VVFVPFFATISAELQLGMAKGVFRKKVGNEDY---QRQSEVVDFVK----KTEAWNRSGG 164
Query: 162 ADHFLLSCHD---WGPRVSYANPKL----FKHFIRA---LCNANTSEGFWPNRDVSIPQL 211
DH + W + A L F + R L N +SE + I +
Sbjct: 165 RDHVFVVTDPVAMWHVKDEIAPAILLVVDFGGWYRLDSKLSNCTSSEMIQHTQVSVIKDV 344
Query: 212 NLPVGKLGPPNTDQHPNNRTILTFFAGGAH----GKIRKKLLKSWK--DKDEEVQVHEYL 265
+P L P R L +F G H G +R+KL W + + V + E
Sbjct: 345 IVPYTHLLPRLHLSENKERHNLLYFKGAKHRHRGGLVREKL---WDLLNNEPSVIMEEGF 515
Query: 266 PKG---QDYTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPF 315
P + + M S+FCL P+G S R+ +AI + C+PVI+ DN LPF
Sbjct: 516 PNATGREQSIQGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPF 674
>TC79742 similar to GP|10177241|dbj|BAB10615.
gb|AAC98455.1~gene_id:MRN17.17~strong similarity to
unknown protein {Arabidopsis thaliana}, partial (32%)
Length = 1063
Score = 41.6 bits (96), Expect = 5e-04
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +2
Query: 141 LVEDYIKIVANKYPYWNISQGADHFLLSCHDWG 173
L+ +K+++ +YP+WN S G+DH ++ HD+G
Sbjct: 728 LISSAVKLISTEYPFWNRSTGSDHVFVASHDFG 826
>TC90643 weakly similar to GP|19386797|dbj|BAB86176. hypothetical
protein~similar to Arabidopsis thaliana protein
T1F15.13, partial (21%)
Length = 771
Score = 36.2 bits (82), Expect = 0.023
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 313 LPFSDVLNWSQFSMEIAVDRIPEIKTI---LQNITETKYRVLYSNVRRVRKHFEMNRPAK 369
LPF D +++SQFS+ + + + L+ + + K+ ++ V+ + H+E P K
Sbjct: 3 LPFEDEIDYSQFSLFFSFKEALQAGYMVDQLRKVPKQKWTEMWRQVKNISHHYEFQYPPK 182
Query: 370 PFDLIHMILHSV 381
D ++M+ V
Sbjct: 183 REDAVNMLWRQV 218
>TC86908 similar to PIR|G96708|G96708 hypothetical protein T26J14.4
[imported] - Arabidopsis thaliana, partial (65%)
Length = 1587
Score = 34.7 bits (78), Expect = 0.066
Identities = 41/187 (21%), Positives = 65/187 (33%), Gaps = 35/187 (18%)
Frame = +2
Query: 154 PYWNISQGADHFLL------------SCHDWGPRVSYANPKLFKHFIRALCNANTSEGFW 201
P+WN G DHF+ S D+G + P ++ + W
Sbjct: 761 PWWNRHNGKDHFISLGRTAWDFMRSSSGSDFGANILLNLPP-----VKNMSVLTVERQPW 925
Query: 202 PNRDVSIPQLNLPVGKLGPPNTDQH---------PNNRTILTFFAGGAH-----GKIRKK 247
+ Q +P P T + N+R+ L F GG KIR +
Sbjct: 926 EGEN----QNGIPYPSYFHPKTKEEMLTWQNKMRQNDRSFLFSFIGGKRKGLGKAKIRDE 1093
Query: 248 LLKSWKDKD---------EEVQVHEYLPKGQDYTKLMGLSKFCLCPSGHEVASPRVVEAI 298
L+K + E + H+ + + +M S+FCL G ++I
Sbjct: 1094LVKQCNESSLCKLVDCGGENSKCHQPM----EVLSVMMQSRFCLQAPGDSFTRRSTFDSI 1261
Query: 299 YAGCVPV 305
AGC+PV
Sbjct: 1262LAGCIPV 1282
>TC91789 weakly similar to GP|19386797|dbj|BAB86176. hypothetical
protein~similar to Arabidopsis thaliana protein
T1F15.13, partial (41%)
Length = 548
Score = 33.1 bits (74), Expect = 0.19
Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 18/168 (10%)
Frame = +3
Query: 100 KATHPELAHVFFLPFSVSKVIRYVYKPRKSRSDYNPHRLQLLVEDYIKIVANKYPYWNIS 159
+ + PELA FF+PF S + +LQ+ + +++K K YW S
Sbjct: 9 RVSDPELADAFFVPFFSSLSFNTHGHTMTDPATEIDRKLQVDLMEFLK----KSKYWQRS 176
Query: 160 QGADHFLLSCHDWGPRVSYANPKLFKHFIRALCNAN----TSEGFWP------NRDVSIP 209
+G DH H P F+ F+R N G +P N+DV P
Sbjct: 177 KGRDHVFPMTH----------PNAFR-FLRNQLNDTIQVVVDFGRYPKGMSNLNKDVVSP 323
Query: 210 QLNLPVGKLGPPNTDQHPNN----RTILTFFAGGA----HGKIRKKLL 249
+++ TD P + R+ L FF G G +R KL+
Sbjct: 324 YVHVV-----DSYTDDEPQDPYEIRSTLLFFRGRTFRKDEGIVRAKLM 452
>CB894770 homologue to GP|4512698|gb| unknown protein {Arabidopsis thaliana},
partial (40%)
Length = 720
Score = 31.6 bits (70), Expect = 0.56
Identities = 41/174 (23%), Positives = 60/174 (33%), Gaps = 20/174 (11%)
Frame = +1
Query: 152 KYPYWNISQGADHFLLSCH-DWGPR------VSYANPKLFKHFIRALCNANTSEGFWPNR 204
K P W+I G DHFL++ W R + N LF + + W
Sbjct: 79 KRPEWSIMNGKDHFLVAGRITWDFRRLSEEETDWGNKLLFLPAAKNMSMLVVESSPWNAN 258
Query: 205 DVSIPQLNL--PVGKLGPPNTDQHPNN--RTILTFFAGGAHGKIRKKLLKSWKDKDEEVQ 260
D IP P N + R L FAG K + ++
Sbjct: 259 DFGIPYPTYFHPAKDADVFNWQDRMRHLERKWLFSFAGAPRPDNAKSIRGQLIEQCRSSP 438
Query: 261 VHEYLP------KGQDYTKLMGL---SKFCLCPSGHEVASPRVVEAIYAGCVPV 305
V + L K + +M + S+FCL P G +++ AGC+PV
Sbjct: 439 VGKLLECDFGESKCHSPSSIMQMFQSSQFCLQPQGDSYTRRSAFDSMLAGCIPV 600
>TC87607 similar to SP|Q9ZTS1|SYM_ORYSA Probable methionyl-tRNA synthetase
(EC 6.1.1.10) (Methionine--tRNA ligase) (MetRS). [Rice],
partial (54%)
Length = 1726
Score = 30.0 bits (66), Expect = 1.6
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +1
Query: 271 YTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQFSME 327
Y +L G + +C + E + +A+ C P ICD Y +V +W S +
Sbjct: 307 YCRLRGYNAIYICGTD-EYGTATETKALEENCSPKEICDKYHAIHKEVYDWFNISFD 474
>TC87608 similar to GP|13940612|gb|AAK50414.1 Putative methionyl-tRNA
synthetase {Oryza sativa}, partial (33%)
Length = 686
Score = 30.0 bits (66), Expect = 1.6
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 271 YTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQFSME 327
Y +L G + +C + E + +A+ C P ICD Y +V +W S +
Sbjct: 135 YCRLRGYNAIYICGTD-EYGTATETKALEENCSPKEICDKYHAIHKEVYDWFNISFD 302
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,135,178
Number of Sequences: 36976
Number of extensions: 217271
Number of successful extensions: 1118
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of query: 398
length of database: 9,014,727
effective HSP length: 98
effective length of query: 300
effective length of database: 5,391,079
effective search space: 1617323700
effective search space used: 1617323700
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Medicago: description of AC144657.9