BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144609.4 - phase: 0 /pseudo
(540 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC88437 similar to GP|1621463|gb|AAB17192.1| laccase {Liriodendr... 581 e-166
TC77614 similar to PIR|JC5229|JC5229 laccase (EC 1.10.3.2) precu... 580 e-166
TC86546 weakly similar to PIR|T45944|T45944 laccase-like protein... 456 e-128
TC89596 similar to GP|9757923|dbj|BAB08370.1 laccase (diphenol o... 366 e-117
TC83114 similar to GP|1621467|gb|AAB17194.1| laccase {Liriodendr... 279 e-114
TC80569 similar to GP|9757923|dbj|BAB08370.1 laccase (diphenol o... 340 8e-94
AW691876 similar to GP|3805964|emb laccase {Populus balsamifera ... 320 5e-88
TC93485 similar to GP|21552583|gb|AAM54731.1 diphenol oxidase la... 188 4e-75
TC82760 similar to GP|3805964|emb|CAA74105.1 laccase {Populus ba... 271 4e-73
TC88631 weakly similar to PIR|T00579|T00579 probable laccase [im... 263 1e-70
TC89065 weakly similar to GP|6478936|gb|AAF14041.1| putative lac... 244 4e-65
TC79970 similar to GP|21552583|gb|AAM54731.1 diphenol oxidase la... 207 5e-65
TC78334 similar to GP|19911587|dbj|BAB86897. syringolide-induced... 223 1e-58
TC93728 similar to GP|1621467|gb|AAB17194.1| laccase {Liriodendr... 214 9e-56
TC92795 similar to GP|1621463|gb|AAB17192.1| laccase {Liriodendr... 124 3e-53
TC86426 similar to PIR|T07634|T07634 pollen-specific protein hom... 191 5e-49
TC82428 similar to GP|1621461|gb|AAB17191.1| laccase {Liriodendr... 186 3e-47
CB891121 similar to GP|1621467|gb| laccase {Liriodendron tulipif... 179 2e-45
TC81351 similar to PIR|T00579|T00579 probable laccase [imported]... 146 2e-35
BG645927 similar to GP|11071902|em laccase {Populus balsamifera ... 145 5e-35
>TC88437 similar to GP|1621463|gb|AAB17192.1| laccase {Liriodendron
tulipifera}, partial (41%)
Length = 984
Score = 581 bits (1497), Expect = e-166
Identities = 282/296 (95%), Positives = 284/296 (95%), Gaps = 1/296 (0%)
Frame = +1
Query: 1 MIVTVPLSKALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSM 60
MIVTVPLSKALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSM
Sbjct: 76 MIVTVPLSKALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSM 255
Query: 61 VTVNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQT 120
VTVNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQT
Sbjct: 256 VTVNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQT 435
Query: 121 GQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEW 180
GQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEW
Sbjct: 436 GQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEW 615
Query: 181 WNADP-EAVIAQALQTGGGPNVSDAYTINGFPGPLYNCSKDTYKLKVKPGKTYLLRLINA 239
W + + QTGGGPNVSDAYTING PGPLYNCSKDTYKLKVKPGKTYLLRLINA
Sbjct: 616 WECRS*SCNLHKLFQTGGGPNVSDAYTINGLPGPLYNCSKDTYKLKVKPGKTYLLRLINA 795
Query: 240 ALNDELFFSIANHTLIIVEADASYIKPFESNTIILGPGQTTNVLLKTKPNYPNSTF 295
ALNDELFFSIANHTLIIVEADASYIKPFESNTIILGPGQTTNVLLKTKPNYPNSTF
Sbjct: 796 ALNDELFFSIANHTLIIVEADASYIKPFESNTIILGPGQTTNVLLKTKPNYPNSTF 963
>TC77614 similar to PIR|JC5229|JC5229 laccase (EC 1.10.3.2) precursor -
common tobacco, partial (96%)
Length = 2063
Score = 580 bits (1496), Expect = e-166
Identities = 279/502 (55%), Positives = 351/502 (69%), Gaps = 1/502 (0%)
Frame = +2
Query: 40 RHYKFDIRLANVTRLCHTKSMVTVNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGV 99
RHYKF + N +RLC +K++VTVNGKFPGP + RE D ++VKV N V NNI++HWHG+
Sbjct: 125 RHYKFHVVAKNTSRLCSSKAIVTVNGKFPGPTLYAREDDTVIVKVRNQVNNNITIHWHGI 304
Query: 100 RQLRSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPR 159
RQLR+GW+DGP+YITQCPIQ G SY YNFTI GQRGTL WHAH +WLR+TV+G +++LP+
Sbjct: 305 RQLRTGWADGPAYITQCPIQPGHSYTYNFTITGQRGTLLWHAHVNWLRSTVHGAIVILPK 484
Query: 160 HNESYPFQKPYKEVPILFGEWWNADPEAVIAQALQTGGGPNVSDAYTINGFPGPLYNCS- 218
YPF KP E+ ++ GEWW +D EAVI +AL++G PNVSDA+TING PG + NCS
Sbjct: 485 KGVPYPFPKPDDELVLVLGEWWKSDTEAVINEALKSGLAPNVSDAHTINGLPGTVANCST 664
Query: 219 KDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLIIVEADASYIKPFESNTIILGPGQ 278
+D YKL V+ GKTYLLR+INAALN+ELFF IA H L +VE DA+Y KPF+ TI++ PGQ
Sbjct: 665 QDVYKLPVESGKTYLLRIINAALNEELFFKIAGHKLTVVEVDATYTKPFQIETIVIAPGQ 844
Query: 279 TTNVLLKTKPNYPNSTFYMLARPYFTGQGTFDNSTVAGILEYTKPNDQTNLNLPILKPVL 338
TTNVLLK N + + + A P+ DN T L Y + T N P
Sbjct: 845 TTNVLLKA--NQKSGKYLVAASPFMDAPVAVDNLTATATLHY---SGTTLTNTPTFLTTP 1009
Query: 339 PVINDTNFVANFSNKFLSLNSPKYPANVPKTIDKNFFFIVGLGTSPCPKNQTCQGPNNSS 398
P N T NF N LNS KYP NVP ID + FF VGLG +PCP +C+ N S
Sbjct: 1010PPTNATQIANNFLNSLKGLNSKKYPVNVPLKIDHSLFFTVGLGVNPCP---SCKA-GNGS 1177
Query: 399 KFAASMNNVSFALPSIALLQQHFFGANNGFTTDFPVVPLRPFNYTGTPPNNTLVSNGTKT 458
+ A++NNV+F +P+ ALLQ H+F N FT DFP P +N+TG P N ++GTK
Sbjct: 1178RVVAAINNVTFVMPTTALLQAHYFNIKNVFTADFPPNPPHIYNFTGAGPKNLNTTSGTKL 1357
Query: 459 VVIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVER 518
+ +N VQ+++QDT I+ ESHP+HLHGFNFFVVG+G GN+++ +D KFNLVDPVER
Sbjct: 1358YKLSFNDTVQLVMQDTGIIAPESHPVHLHGFNFFVVGRGVGNYDSKNDSKKFNLVDPVER 1537
Query: 519 NTVAVPSGGWVAIRFLADNPGV 540
NTV VP+GGWVAIRF ADNPGV
Sbjct: 1538NTVGVPAGGWVAIRFRADNPGV 1603
>TC86546 weakly similar to PIR|T45944|T45944 laccase-like protein -
Arabidopsis thaliana, partial (64%)
Length = 2066
Score = 456 bits (1172), Expect = e-128
Identities = 229/522 (43%), Positives = 327/522 (61%), Gaps = 10/522 (1%)
Frame = +3
Query: 29 VLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVTVNGKFPGPRIVVREGDRLLVKVVNHV 88
+L++ + T + F + + RLC+ + +VTVNG +PGP++ VR+GD ++V V+N+
Sbjct: 69 ILSSFMASAATVEHTFLVENKTIKRLCNEQVIVTVNGLYPGPKLEVRDGDSVIVHVINNS 248
Query: 89 PNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRA 148
P NI++HWHGV QL S WSDGP YITQC I+ + Y F + Q GTL+WHAH S +RA
Sbjct: 249 PYNITIHWHGVFQLYSAWSDGPEYITQCSIRPENKFTYKFNVTQQEGTLWWHAHASVVRA 428
Query: 149 TVYGPLILLPRHNESYPFQKPYKEVPILFGEWWNADPEAVIAQALQTGGGPNVSDAYTIN 208
TV+G +I+ PR +PF KPYKEVPI+ G+W++ + E +I + L+T G SDA+TIN
Sbjct: 429 TVHGAIIIQPRSGR-FPFPKPYKEVPIILGDWYDGNVEEIIQKELET-GDKIASDAFTIN 602
Query: 209 GFPGPLYNCSKD-TYKLKVKPGKTYLLRLINAALNDELFFSIANHTLIIVEADASYIKPF 267
GFPG L+NCSK+ YKLKVK GKTYL R++NAAL + LFF IA+H +V DA+Y +P+
Sbjct: 603 GFPGDLFNCSKNQMYKLKVKQGKTYLFRMVNAALANNLFFKIADHKFTVVAMDAAYTEPY 782
Query: 268 ESNTIILGPGQTTNVLLKTKPNYPNSTFYMLARPYFTGQ--GTFDNSTVAGILEYTKPND 325
++ I++ GQ+ ++L + P ++YM A PY G+ G FDNST ++ Y
Sbjct: 783 TTDIIVIAAGQSADILFTA--DQPKGSYYMAASPYVVGEPVGLFDNSTTRAVVFYEGYKK 956
Query: 326 QTNLNLPILKPVLPVINDTNFVANFSNKFLSLNSPKYPANVPKTIDKNFFFIVGLGTSPC 385
++ L P LP+ N+T F + L VP +D++ + + +G PC
Sbjct: 957 LKTKHIVPLMPALPLHNNTPIAHKFFSNITGLVGGPNWVPVPLEVDEHMYITINMGLVPC 1136
Query: 386 PKNQTCQGPNNSSKFAASMNNVSFALP---SIALLQQHFFGANNGFTTDFPVVPLRPFNY 442
P N C GP KFA+SMNN SF LP ++++ +F+ + +TTDFP P + F++
Sbjct: 1137PVNAKCTGP-LGQKFASSMNNESFLLPVGKGYSIMEAYFYNVSGIYTTDFPDNPPKFFDF 1313
Query: 443 TG----TPPNNTLVSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGF 498
PN T TK YN+ V+++ Q+T+IL A+SHP+HLHG NF V+ Q F
Sbjct: 1314VNPKIFLDPNVTFTPKSTKVKQFKYNSTVEIVFQNTAILNAQSHPMHLHGMNFHVLAQDF 1493
Query: 499 GNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGV 540
G FN ++D K+NLV+P RNTVAVP GGW AIRF +NPGV
Sbjct: 1494GIFNPTTDKLKYNLVNPSIRNTVAVPVGGWAAIRFRTNNPGV 1619
>TC89596 similar to GP|9757923|dbj|BAB08370.1 laccase (diphenol oxidase)
{Arabidopsis thaliana}, partial (44%)
Length = 921
Score = 366 bits (939), Expect(3) = e-117
Identities = 172/240 (71%), Positives = 202/240 (83%), Gaps = 1/240 (0%)
Frame = +2
Query: 3 VTVPLSKALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVT 62
+ V + +L A LF++ + F LA TRHY+FDI NVTRLCH K MVT
Sbjct: 59 MAVTIFSSLKIATLFLSLINFCAFEFALA-----GTTRHYQFDIGYQNVTRLCHNKRMVT 223
Query: 63 VNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQ 122
VNG+FPGPRI+ REGDRL++KVVN+V NNIS+HWHG+RQL+SGW+DGP+Y+TQCPIQTGQ
Sbjct: 224 VNGQFPGPRIMAREGDRLVIKVVNNVQNNISIHWHGIRQLQSGWADGPAYVTQCPIQTGQ 403
Query: 123 SYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEWWN 182
SYVYN+TI GQRGTLFWHAH SWLR+T+YGPLI+LP+ N YPF KP+KEVP++FGEW+N
Sbjct: 404 SYVYNYTIKGQRGTLFWHAHISWLRSTLYGPLIILPKKNVPYPFAKPHKEVPMIFGEWFN 583
Query: 183 ADPEAVIAQALQTGGGPNVSDAYTINGFPGPLYNCS-KDTYKLKVKPGKTYLLRLINAAL 241
AD EA+IAQALQTGGGPNVS+AYTING PGPLYNCS KDT+KLKVKPGKTYLLRLINAAL
Sbjct: 584 ADTEAIIAQALQTGGGPNVSEAYTINGLPGPLYNCSKKDTFKLKVKPGKTYLLRLINAAL 763
Score = 66.2 bits (160), Expect(3) = e-117
Identities = 29/40 (72%), Positives = 36/40 (89%)
Frame = +1
Query: 254 LIIVEADASYIKPFESNTIILGPGQTTNVLLKTKPNYPNS 293
L +VEADA Y+KPFE+NTI++ PGQTTNVLLKTK +YPN+
Sbjct: 802 LKVVEADAIYVKPFETNTILIAPGQTTNVLLKTKSHYPNA 921
Score = 28.9 bits (63), Expect(3) = e-117
Identities = 11/12 (91%), Positives = 12/12 (99%)
Frame = +3
Query: 242 NDELFFSIANHT 253
NDELFFS+ANHT
Sbjct: 765 NDELFFSVANHT 800
>TC83114 similar to GP|1621467|gb|AAB17194.1| laccase {Liriodendron
tulipifera}, partial (54%)
Length = 1216
Score = 279 bits (714), Expect(2) = e-114
Identities = 137/202 (67%), Positives = 164/202 (80%), Gaps = 7/202 (3%)
Frame = +1
Query: 265 KPFESNTIILGPGQTTNVLLKTKPNYPNSTFYMLARPYFTGQGTFDNSTVAGILEYTKPN 324
KPF +NTI++ PGQTTNVLLKTKP+YPN+TF MLARPY TGQGTFDNSTVAGI+EY P
Sbjct: 4 KPFVTNTILIAPGQTTNVLLKTKPHYPNATFLMLARPYATGQGTFDNSTVAGIIEYEIPF 183
Query: 325 DQTNLN-----LPILKPVLPVINDTNFVANFSNKFLSLNSPKYPANVPKTIDKNFFFIVG 379
+ + N LP+LKP+LP +NDT+F NF+NK SL + ++PANVP+ +DK+FFF VG
Sbjct: 184 NTHHSNSSLKKLPLLKPILPQLNDTSFATNFTNKLHSLANAQFPANVPQKVDKHFFFTVG 363
Query: 380 LGTSPCP-KNQTCQGPNNSSKFAASMNNVSFALPSIALLQQHFFGANNG-FTTDFPVVPL 437
LGT+PC KNQTCQGP N + FAAS+NNVSF +P+ ALLQ HFFG NNG +TTDFP P+
Sbjct: 364 LGTNPCQNKNQTCQGP-NGTMFAASVNNVSFIMPTTALLQTHFFGQNNGIYTTDFPSKPM 540
Query: 438 RPFNYTGTPPNNTLVSNGTKTV 459
PFNYTGTPPNNT+VSNGTK V
Sbjct: 541 NPFNYTGTPPNNTMVSNGTKVV 606
Score = 150 bits (380), Expect(2) = e-114
Identities = 68/81 (83%), Positives = 76/81 (92%)
Frame = +2
Query: 460 VIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVERN 519
V+P+NT V+++LQDTSILG ESHPLHLHGFNFFVVGQGFGNF+++SDP FNLVDPVERN
Sbjct: 608 VLPFNTSVELVLQDTSILGVESHPLHLHGFNFFVVGQGFGNFDSNSDPQNFNLVDPVERN 787
Query: 520 TVAVPSGGWVAIRFLADNPGV 540
TV VPSGGWVAIRFLADNPGV
Sbjct: 788 TVGVPSGGWVAIRFLADNPGV 850
>TC80569 similar to GP|9757923|dbj|BAB08370.1 laccase (diphenol oxidase)
{Arabidopsis thaliana}, partial (46%)
Length = 1117
Score = 340 bits (872), Expect = 8e-94
Identities = 161/241 (66%), Positives = 193/241 (79%), Gaps = 6/241 (2%)
Frame = +1
Query: 306 QGTFDNSTVAGILEYTKPNDQTNL-----NLPILKPVLPVINDTNFVANFSNKFLSLNSP 360
QGTFDN+TVAGILEY P++ + +P+ KP LP +NDT+F FS K SL SP
Sbjct: 1 QGTFDNTTVAGILEYEIPSNTHHSASSLKKIPLFKPTLPALNDTSFATKFSKKLRSLASP 180
Query: 361 KYPANVPKTIDKNFFFIVGLGTSPCPKNQTCQGPNNSSKFAASMNNVSFALPSIALLQQH 420
++PANVP+ +DK+FFF VGLGT+PC NQTCQGPN + FAAS+NNVSF +P+ ALLQ H
Sbjct: 181 QFPANVPQKVDKHFFFTVGLGTNPCQSNQTCQGPNGTM-FAASVNNVSFTMPTTALLQSH 357
Query: 421 FFGANNG-FTTDFPVVPLRPFNYTGTPPNNTLVSNGTKTVVIPYNTRVQVILQDTSILGA 479
F G + G + FP PL PFNYTGTPPNNT+VSNGTK V+P+NT V++++QDTSILGA
Sbjct: 358 FTGQSRGVYAPYFPSSPLHPFNYTGTPPNNTMVSNGTKVTVLPFNTSVELVMQDTSILGA 537
Query: 480 ESHPLHLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPG 539
ESHPLHLHGFNFFVVGQGFGN++++ DP FNLVDPVERNT+ VPSGGWVAIRFLADNPG
Sbjct: 538 ESHPLHLHGFNFFVVGQGFGNYDSNKDPKNFNLVDPVERNTIGVPSGGWVAIRFLADNPG 717
Query: 540 V 540
V
Sbjct: 718 V 720
>AW691876 similar to GP|3805964|emb laccase {Populus balsamifera subsp.
trichocarpa}, partial (30%)
Length = 659
Score = 320 bits (820), Expect(2) = 5e-88
Identities = 141/203 (69%), Positives = 169/203 (82%)
Frame = +1
Query: 12 FAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVTVNGKFPGPR 71
F FLF ++ P V+ TRHY F+I NVTRLCHT+++++VNGKFPGPR
Sbjct: 40 FKVFLFGLCVIILFPELVVCR------TRHYTFNIEYKNVTRLCHTRTILSVNGKFPGPR 201
Query: 72 IVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQSYVYNFTIV 131
+V REGDR+LVKVVNH+ NN+++HWHG+RQ +GWSDGP+Y+TQCPIQT Q+Y YNFTI
Sbjct: 202 LVAREGDRVLVKVVNHISNNVTIHWHGIRQKTTGWSDGPAYVTQCPIQTNQTYTYNFTIT 381
Query: 132 GQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEWWNADPEAVIAQ 191
GQRGTLFWHAH SWLRAT+YGP+I+LP+HNESYPFQKP+KE+PILFGEW+N DPEAVI Q
Sbjct: 382 GQRGTLFWHAHISWLRATLYGPIIILPKHNESYPFQKPHKEIPILFGEWFNVDPEAVINQ 561
Query: 192 ALQTGGGPNVSDAYTINGFPGPL 214
ALQTGGGPNVSDAYTING PG +
Sbjct: 562 ALQTGGGPNVSDAYTINGLPGTI 630
Score = 23.1 bits (48), Expect(2) = 5e-88
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 210 FPGPLYNC 217
FPGP YNC
Sbjct: 617 FPGPFYNC 640
>TC93485 similar to GP|21552583|gb|AAM54731.1 diphenol oxidase laccase
{Glycine max}, partial (40%)
Length = 740
Score = 188 bits (477), Expect(2) = 4e-75
Identities = 76/123 (61%), Positives = 99/123 (79%)
Frame = +3
Query: 63 VNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQ 122
VNG+FPGP + + GD L+VKV+N N+++HWHGVRQ+R+GW+DGP ++TQCPI+ G+
Sbjct: 48 VNGQFPGPTLEINNGDTLVVKVINKARYNVTIHWHGVRQIRTGWADGPEFVTQCPIRPGE 227
Query: 123 SYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEWWN 182
SY Y FTI GQ GTL+WHAH SWLRATVYG LI+ P+ ++YPF KP +E PIL GEWW+
Sbjct: 228 SYTYRFTINGQEGTLWWHAHSSWLRATVYGALIIHPKEGDAYPFTKPKRETPILLGEWWD 407
Query: 183 ADP 185
A+P
Sbjct: 408 ANP 416
Score = 112 bits (279), Expect(2) = 4e-75
Identities = 56/94 (59%), Positives = 69/94 (72%), Gaps = 1/94 (1%)
Frame = +2
Query: 192 ALQTGGGPNVSDAYTINGFPGPLYNCS-KDTYKLKVKPGKTYLLRLINAALNDELFFSIA 250
A QTG PN+SDAYTING PG LY CS K T + + G+T L+R+INAALN L F+IA
Sbjct: 437 ATQTGAAPNISDAYTINGQPGDLYKCSSKGTTIVPIXSGETNLIRVINAALNQPLXFTIA 616
Query: 251 NHTLIIVEADASYIKPFESNTIILGPGQTTNVLL 284
NH L ADASY+KPF +N ++LGP QTT+VL+
Sbjct: 617 NHKLTXXGADASYVKPFTTNVLMLGPDQTTDVLI 718
>TC82760 similar to GP|3805964|emb|CAA74105.1 laccase {Populus balsamifera
subsp. trichocarpa}, partial (34%)
Length = 970
Score = 271 bits (694), Expect = 4e-73
Identities = 124/176 (70%), Positives = 149/176 (84%), Gaps = 3/176 (1%)
Frame = +3
Query: 368 KTIDKNFFFIVGLGTSPCPKNQTCQGPNNSSKFAASMNNVSFALPSIALLQQHFFGANNG 427
K + FFF VGLGT PCPKN TCQGPNN++KFAAS+NN SF LPS++++Q ++FG +N
Sbjct: 33 KKLTIKFFFTVGLGTFPCPKNSTCQGPNNNTKFAASVNNFSFVLPSVSIMQAYYFGKSNS 212
Query: 428 ---FTTDFPVVPLRPFNYTGTPPNNTLVSNGTKTVVIPYNTRVQVILQDTSILGAESHPL 484
+ TDFP PL PFNYTGT PNNT+V+N TK VV+ +NT V+++LQDTSILGAESHPL
Sbjct: 213 NGVYKTDFPETPLNPFNYTGTSPNNTMVNNDTKLVVLNFNTSVELVLQDTSILGAESHPL 392
Query: 485 HLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGV 540
HLHG++FFVVGQGFGN++A+ DPAKFNLVDPVERNTV VP+GGWVAIRF ADNPGV
Sbjct: 393 HLHGYDFFVVGQGFGNYDANKDPAKFNLVDPVERNTVGVPAGGWVAIRFFADNPGV 560
>TC88631 weakly similar to PIR|T00579|T00579 probable laccase [imported] -
Arabidopsis thaliana, partial (38%)
Length = 779
Score = 263 bits (673), Expect = 1e-70
Identities = 130/249 (52%), Positives = 167/249 (66%), Gaps = 1/249 (0%)
Frame = +3
Query: 5 VPLSKALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVTVN 64
V K + L + T +++ F A H +++F I+ A V RLC T+ ++TVN
Sbjct: 18 VTTMKTILCYLLGLLTIIVS---FASAAENH-----YHQFVIQTATVKRLCKTRRILTVN 173
Query: 65 GKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQSY 124
G+FPGP I R+GD +++KV N P NIS+HWHG R LR+ W+DGPSY+TQCPIQ G SY
Sbjct: 174 GQFPGPTIEARDGDSMVIKVTNAGPYNISIHWHGFRMLRNPWADGPSYVTQCPIQPGGSY 353
Query: 125 VYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEWWNAD 184
Y FTI Q GTL+WHAH +LRATVYG I+ P+ YPF P +E PIL GEW++ D
Sbjct: 354 TYRFTIQNQEGTLWWHAHTGFLRATVYGAFIIYPKMGSPYPFSMPTREFPILLGEWFDRD 533
Query: 185 PEAVIAQALQTGGGPNVSDAYTINGFPGPLYNC-SKDTYKLKVKPGKTYLLRLINAALND 243
P A++ Q TG PNVS AYT+NG PG LY C S+ T + +V G+T LLR+IN+ALN
Sbjct: 534 PMALLRQTQFTGAPPNVSVAYTMNGQPGDLYRCSSQGTVRFQVYAGETILLRIINSALNQ 713
Query: 244 ELFFSIANH 252
ELFFSIANH
Sbjct: 714 ELFFSIANH 740
>TC89065 weakly similar to GP|6478936|gb|AAF14041.1| putative laccase
{Arabidopsis thaliana}, partial (63%)
Length = 1647
Score = 244 bits (623), Expect(2) = 4e-65
Identities = 142/364 (39%), Positives = 202/364 (55%), Gaps = 13/364 (3%)
Frame = +1
Query: 165 PFQKPYKEVPILFGEWWNADPEAVIAQALQTGGGPNVSDAYTINGFPGPLYNCSKD-TYK 223
P Q+ K+ P G + A TG P S+A TING P LYNCS+D TYK
Sbjct: 469 PSQRFIKKSPYCLGSGGMLMLKKFERNATDTGNPPEESNASTINGLPSDLYNCSQDQTYK 648
Query: 224 LKVKPGKTYLLRLINAALNDELFFSIANHTLIIVEADASYIKPFESNTIILGPGQTTNVL 283
+KVK GKTYLLR+INAALN++ FF IANH+ +V DA Y + + ++ ++L PGQT +VL
Sbjct: 649 VKVKQGKTYLLRIINAALNEQHFFKIANHSFTVVAMDAIYTEHYNTDVVVLAPGQTVDVL 828
Query: 284 LKTKPNYPNSTFYMLARPYFTGQGTFDNSTVAGILEYTKPNDQTNLNLPILKPVLPVIND 343
LKT N ++YM+ PY + N T G++ Y + + PI+ P++P +D
Sbjct: 829 LKT--NQVVDSYYMVFTPYRSSNVGTSNITTRGVVVY---DGASQTKAPIM-PIMPDAHD 990
Query: 344 TNFVANFSNKFLSLNSPKYPANVPKTIDKNFFFIVGLGTSPC--PKNQTCQGPNNSSKFA 401
T F L + + VP+ +D++ F G+G C P C N S+ +
Sbjct: 991 TPTAHKFYTNVTGLTTGPHWVPVPRKVDEHMFITFGIGLEQCINPGPGRCVVLN--SRLS 1164
Query: 402 ASMNNVSFALP---SIALLQQHFFGANNGFTTDFPVVPLRPFNYTGTPPNN-------TL 451
A+MNN SF LP +LL+ + + +T DFP P FNYT N
Sbjct: 1165ANMNNESFVLPKGRGFSLLEAFYKNISGVYTKDFPNQPPFEFNYTDPSLANVNPSEPLAF 1344
Query: 452 VSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASSDPAKFN 511
TK + +N+ V+++LQ+T+ILG E+HP+H+HGFNF V+ QGFGN+NA+ D KFN
Sbjct: 1345APKSTKVKTLKFNSTVEIVLQNTAILGTENHPIHIHGFNFHVLAQGFGNYNATRDEPKFN 1524
Query: 512 LVDP 515
V+P
Sbjct: 1525FVNP 1536
Score = 184 bits (467), Expect = 7e-47
Identities = 83/160 (51%), Positives = 108/160 (66%)
Frame = +3
Query: 29 VLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVTVNGKFPGPRIVVREGDRLLVKVVNHV 88
+LA+S + + F++ + RLC + + VNG PGP I REGD +++ V N
Sbjct: 60 LLASSLASAAIVEHTFNVEDFTIQRLCLPQVITAVNGTLPGPTINAREGDTVIIHVFNKS 239
Query: 89 PNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRA 148
P N++LHWHG+ Q + WSDGP Y+TQCPI +G SY Y F + GQ GTL+WHAH S+LRA
Sbjct: 240 PYNLTLHWHGIIQFLTPWSDGPEYVTQCPIPSGGSYTYQFNLTGQEGTLWWHAHSSFLRA 419
Query: 149 TVYGPLILLPRHNESYPFQKPYKEVPILFGEWWNADPEAV 188
TV+G LI+ PR SYPF K Y+EVPIL GEWWNA+ E V
Sbjct: 420 TVHGALIIKPRLGRSYPFPKVYQEVPILLGEWWNANVEEV 539
Score = 22.7 bits (47), Expect(2) = 4e-65
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 519 NTVAVPSGGW 528
NT++VP GGW
Sbjct: 1547 NTISVPVGGW 1576
>TC79970 similar to GP|21552583|gb|AAM54731.1 diphenol oxidase laccase
{Glycine max}, partial (36%)
Length = 800
Score = 207 bits (528), Expect(2) = 5e-65
Identities = 92/181 (50%), Positives = 123/181 (67%)
Frame = +1
Query: 16 LFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVTVNGKFPGPRIVVR 75
+ + F+L+S LA + T ++F + V RLC T + +TVNG++PGP + +
Sbjct: 121 ILIAIFVLSSFALALANPK----THEHEFVVEATPVKRLCKTHNTITVNGQYPGPTLEIN 288
Query: 76 EGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRG 135
GD L+VKV N N+++HWHGVRQ+R+GW+DGP ++TQCPI+ G SY Y FT+ GQ G
Sbjct: 289 NGDTLVVKVTNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVNGQEG 468
Query: 136 TLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEWWNADPEAVIAQALQT 195
TL+WHAH SWLRATVYG LI+ PR E YPF KP E IL GEWW+ +P V+ QA +T
Sbjct: 469 TLWWHAHSSWLRATVYGALIIRPREGEPYPFPKPNHETSILLGEWWDGNPINVVRQAQRT 648
Query: 196 G 196
G
Sbjct: 649 G 651
Score = 58.9 bits (141), Expect(2) = 5e-65
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 194 QTGGGPNVSDAYTINGFPGPLYNCS-KDTYKLKVKPGKTYLLRLINAALN 242
+ G PN+SDAYTING PG LY CS K T + + G+T L+R+INAALN
Sbjct: 644 ELGAAPNISDAYTINGQPGDLYKCSTKGTTIIPIHSGETNLVRVINAALN 793
>TC78334 similar to GP|19911587|dbj|BAB86897. syringolide-induced protein
B13-1-1 {Glycine max}, partial (98%)
Length = 2187
Score = 223 bits (568), Expect = 1e-58
Identities = 168/533 (31%), Positives = 255/533 (47%), Gaps = 32/533 (6%)
Frame = +3
Query: 40 RHYKFDIRLANVTRLCHTKSMVTVNGKFPGPRIVVREGDRLLVKVVNHV-PNNISLHWHG 98
RHYK++++ + C+ K ++T+NGK PGP I +EGD ++V+V N + N+++HWHG
Sbjct: 222 RHYKWEVKYDYRSPDCYKKLVITINGKTPGPTIQAQEGDTVVVEVNNKLLTENLAIHWHG 401
Query: 99 VRQLRSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLR-ATVYGPLILL 157
+RQ+ + W DG ++QCPI G ++VY F +V + GT +HAH+ R A VYG + +
Sbjct: 402 IRQIGTPWFDGTEGVSQCPILPGDTFVYRF-VVDRPGTYLYHAHYGMQREAGVYGMIRVA 578
Query: 158 PRHNESYPFQKPYKEVPILFGEWWN----ADPEAVIAQALQTGGGPNVSDAYTINGFPGP 213
P N+ PF + + I+ +W++ + A Q G P D+ I+G
Sbjct: 579 P--NDPEPFSYDF-DRSIILNDWYHRSTYEQSARLSAIPFQWVGEP---DSLLIHG--KG 734
Query: 214 LYNCSK-----------------DTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLII 256
YNCS + V GKTY +R+ + L F I H + +
Sbjct: 735 RYNCSLLPSLPAAGVCNSSNPECSPFSQTVVSGKTYRIRVASLTALSALSFQIEGHNMTV 914
Query: 257 VEADASYIKPFESNTIILGPGQTTNVLLKTKPNYPNSTFYMLARPYFTGQGTFDNSTVAG 316
VEAD Y+ PF + + G+T +VL+KT + P+ +++ + + T G
Sbjct: 915 VEADGHYVDPFVVKNLYIYSGETYSVLVKTDQD-PSRNYWITSNVVSRNRTT---PPGLG 1082
Query: 317 ILEYTKPNDQTNLNLPILKPVLPVINDTNFVANFSNKFLSLNSPKYPANVPKTIDKNFFF 376
I Y PN + P P P D N + + Y P T D+
Sbjct: 1083IFNY-YPNHP--MRSPPTSPPPPPAWD-NVESRHTQSLAIKAHQNYTIKPPTTSDR---V 1241
Query: 377 IVGLGTSPCPKNQTCQGPNNSSKFAASMNNVSFALPSIALLQQHFFGANNGFTTDFPVVP 436
IV L T N S+NNVSF LP L T +F P
Sbjct: 1242IVLLNTQNTIDNVR----------HWSVNNVSFFLPHTPYL----VALKENITGEFNQTP 1379
Query: 437 LRPFNY------TGTPPNNTLVSNGTKTVVIPYNTRVQVILQDTSIL---GAESHPLHLH 487
P Y + NNT ++ + +NT V +ILQ+ + + +E+HP HLH
Sbjct: 1380-PPDGYDFNNYDIFSVANNTNATSSNGIYRLKFNTTVDIILQNANTMNKNNSETHPWHLH 1556
Query: 488 GFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGV 540
G +F+V+G G G F+A+ DP +NLV+P+ +NTV V S GW A+RF +DNPGV
Sbjct: 1557GHDFWVLGYGKGKFDANKDPKNYNLVNPIMKNTVPVHSFGWTALRFRSDNPGV 1715
>TC93728 similar to GP|1621467|gb|AAB17194.1| laccase {Liriodendron
tulipifera}, partial (21%)
Length = 514
Score = 214 bits (544), Expect = 9e-56
Identities = 97/164 (59%), Positives = 126/164 (76%), Gaps = 7/164 (4%)
Frame = +2
Query: 2 IVTVPLSKALFAAFLFVTTFLLTSPGFVLAT-------SQHGSVTRHYKFDIRLANVTRL 54
++ + +A A L V L P A ++H S TRHYKFDI+L NVTRL
Sbjct: 23 VLLISKCQAFMRAMLIVLCALWVLPELAHARHVRTTSHAKHVSTTRHYKFDIKLQNVTRL 202
Query: 55 CHTKSMVTVNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYIT 114
C TKS+VTVNG+FPGPRI+ REGDR++VKVVNHV N+S+HWHG+RQ+RS W+DGP+YIT
Sbjct: 203 CQTKSIVTVNGQFPGPRIIAREGDRVVVKVVNHVQYNVSIHWHGIRQVRSAWADGPAYIT 382
Query: 115 QCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLP 158
QCPI+ GQSYV+ FTI+GQRGTL++HAH SWLR+T++GP+++LP
Sbjct: 383 QCPIKPGQSYVHKFTIIGQRGTLWYHAHISWLRSTLHGPIVILP 514
>TC92795 similar to GP|1621463|gb|AAB17192.1| laccase {Liriodendron
tulipifera}, partial (19%)
Length = 662
Score = 124 bits (311), Expect(2) = 3e-53
Identities = 60/95 (63%), Positives = 72/95 (75%)
Frame = +2
Query: 10 ALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVTVNGKFPG 69
+LF++ L + F+ + F S TRHY FDIR NVTRLCH KSMVTVNG+FPG
Sbjct: 194 SLFSS-LKIQVFIFSLINFGFFEVALASTTRHYHFDIRYENVTRLCHKKSMVTVNGQFPG 370
Query: 70 PRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRS 104
PRIV REGDRL++KVVNHV NNIS+HWHG+RQL+S
Sbjct: 371 PRIVAREGDRLIIKVVNHVQNNISIHWHGIRQLQS 475
Score = 103 bits (256), Expect(2) = 3e-53
Identities = 41/49 (83%), Positives = 47/49 (95%)
Frame = +3
Query: 105 GWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGP 153
GW+DGP+Y+TQCPIQTGQSYVYN+TI GQRGTLFWHAH SWLR+T+YGP
Sbjct: 477 GWADGPAYVTQCPIQTGQSYVYNYTIKGQRGTLFWHAHISWLRSTLYGP 623
>TC86426 similar to PIR|T07634|T07634 pollen-specific protein homolog
T1P17.10 - Arabidopsis thaliana, partial (91%)
Length = 2220
Score = 191 bits (486), Expect = 5e-49
Identities = 154/554 (27%), Positives = 243/554 (43%), Gaps = 21/554 (3%)
Frame = +3
Query: 8 SKALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVTVNGKF 67
S A FLF+ F+L S Y+F++ + L + ++ +N +F
Sbjct: 174 SMASSPLFLFLINIF-----FLLTLSYAEDAFVPYEFEVSYITASPLGVPQQVIAINKQF 338
Query: 68 PGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQSYVYN 127
PGP I V + + V V N + N+ +HW GV+Q RS W DG T CPI ++ Y
Sbjct: 339 PGPTINVTTNNNVAVNVHNKLDENLLIHWSGVQQRRSSWQDGVLG-TNCPIPPKWNWTYQ 515
Query: 128 FTIVGQRGTLFWHAHFSWLRATV-YGPLILLPRHNESYPFQKPYKEVPILFGEWWNADPE 186
F + Q G+ F+ ++ RA +G I+ R S PF P +++ + G+W+ +
Sbjct: 516 FQVKDQIGSFFYFPSLNFQRAAGGFGGFIINNRPVISVPFDTPERDIVVFIGDWYTRNHT 695
Query: 187 AVIAQALQTGGGPNVSDAYTINGFPGPLYNCSK-----DTYKLKVKPGKTYLLRLINAAL 241
A + +AL G + D ING YN + D ++ VKPGKTY LR+ N +
Sbjct: 696 A-LRKALDDGKDLGMPDGVLINGKGPYRYNDTLVPEGIDFEQIDVKPGKTYRLRVHNVGI 872
Query: 242 NDELFFSIANHTLIIVEADASYIKPFESNTIILGPGQTTNVLLKTKPNYPNSTFYMLARP 301
+ L F I NH L++ E + SY ++ + GQ+ + L+ N +S +Y++A
Sbjct: 873 STSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQN-ASSDYYIVASA 1049
Query: 302 YFTGQGTFDNSTVAGILEYTKPNDQTNLNLPILKPVLPVINDTNFVANFSNKFLSLNSPK 361
F + + T GIL Y+ + +LP D F FS
Sbjct: 1050RFVNESRWQRVTGVGILHYSNSKGKARGHLPPGP-------DDQFDKTFS---------- 1178
Query: 362 YPANVPKTIDKNFFFIVGLGTSPCPKNQTCQGPNN---------------SSKFAASMNN 406
N ++I N + G P P+ G N K A+++
Sbjct: 1179--MNQARSIRWN---VSASGARPNPQGSFRYGSINVTEIYVLKNKPPVKIDGKRRATLSG 1343
Query: 407 VSFALPSIALLQQHFFGANNGFTTDFPVVPLRPFNYTGTPPNNTLVSNGTKTVVIPYNTR 466
+SFA P+ + + + DFP PL TG+P T V NG+ +
Sbjct: 1344ISFANPATPIRLADHYKLKGVYKLDFPTKPL-----TGSPRVETSVINGS------FRGF 1490
Query: 467 VQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSG 526
+++ILQ+ + H HL G+ FFVVG FG+++ +S +N D + R+T V G
Sbjct: 1491MEIILQNND---TKMHTYHLSGYAFFVVGMDFGDWSENS-RGTYNKWDGIARSTAQVYPG 1658
Query: 527 GWVAIRFLADNPGV 540
W A+ DN GV
Sbjct: 1659AWTAVLVSLDNVGV 1700
>TC82428 similar to GP|1621461|gb|AAB17191.1| laccase {Liriodendron
tulipifera}, partial (22%)
Length = 707
Score = 186 bits (471), Expect = 3e-47
Identities = 90/90 (100%), Positives = 90/90 (100%)
Frame = +1
Query: 451 LVSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASSDPAKF 510
LVSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASSDPAKF
Sbjct: 1 LVSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASSDPAKF 180
Query: 511 NLVDPVERNTVAVPSGGWVAIRFLADNPGV 540
NLVDPVERNTVAVPSGGWVAIRFLADNPGV
Sbjct: 181 NLVDPVERNTVAVPSGGWVAIRFLADNPGV 270
>CB891121 similar to GP|1621467|gb| laccase {Liriodendron tulipifera},
partial (25%)
Length = 706
Score = 179 bits (454), Expect = 2e-45
Identities = 81/108 (75%), Positives = 92/108 (85%)
Frame = -3
Query: 433 PVVPLRPFNYTGTPPNNTLVSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHGFNFF 492
P P FNYTGTPP N +V +GTK V+PYNT+V+++LQDTSILGAESHPLHLHGFNFF
Sbjct: 704 PSNPPVKFNYTGTPPKNIMVKSGTKVAVLPYNTKVELVLQDTSILGAESHPLHLHGFNFF 525
Query: 493 VVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGV 540
+VGQG GNF+ DPAKFNLVDPVERNT VP+GGWVA+RFLADNPGV
Sbjct: 524 IVGQGNGNFDPKKDPAKFNLVDPVERNTAGVPAGGWVALRFLADNPGV 381
>TC81351 similar to PIR|T00579|T00579 probable laccase [imported] -
Arabidopsis thaliana, partial (27%)
Length = 765
Score = 146 bits (368), Expect = 2e-35
Identities = 69/114 (60%), Positives = 80/114 (69%), Gaps = 1/114 (0%)
Frame = +3
Query: 428 FTTDFPVVPLRPFNYTGTPPNNTLVSN-GTKTVVIPYNTRVQVILQDTSILGAESHPLHL 486
FTTDFP V FNYTG P GTK + Y + VQ++LQDTSI+ E HP+H+
Sbjct: 54 FTTDFPPVLPIQFNYTGNVPRGLWTPRKGTKLFKLKYGSNVQIVLQDTSIVTVEDHPMHV 233
Query: 487 HGFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGV 540
HGF+FFVVG GFGNFN +DPA FNLVDP RNT+ P GGWVAIRF ADNPG+
Sbjct: 234 HGFHFFVVGSGFGNFNPRTDPATFNLVDPPVRNTIGTPPGGWVAIRFKADNPGI 395
>BG645927 similar to GP|11071902|em laccase {Populus balsamifera subsp.
trichocarpa}, partial (38%)
Length = 574
Score = 145 bits (365), Expect = 5e-35
Identities = 67/112 (59%), Positives = 83/112 (73%)
Frame = -1
Query: 429 TTDFPVVPLRPFNYTGTPPNNTLVSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHG 488
T DFP P +N+TG+ N + GT+ + YN+ VQ++LQDT +L E+HP+HLHG
Sbjct: 574 TDDFPGNPPVVYNFTGSQVTNLATTKGTRLYRLAYNSTVQLVLQDTGMLTPENHPIHLHG 395
Query: 489 FNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGV 540
FNFFVVG+G GNF++ D KFNLVDPVERNTV VP+GGW AIRF ADNPGV
Sbjct: 394 FNFFVVGRGQGNFDSKKDVKKFNLVDPVERNTVGVPAGGWTAIRFKADNPGV 239
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.321 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,015,612
Number of Sequences: 36976
Number of extensions: 280873
Number of successful extensions: 1407
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of query: 540
length of database: 9,014,727
effective HSP length: 101
effective length of query: 439
effective length of database: 5,280,151
effective search space: 2317986289
effective search space used: 2317986289
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC144609.4