BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144564.17 - phase: 0
(559 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77943 similar to GP|10179602|gb|AAG13810.1 PSTVd RNA-binding p... 589 e-180
TC77944 similar to GP|10179602|gb|AAG13810.1 PSTVd RNA-binding p... 376 e-114
TC84035 similar to PIR|A86198|A86198 hypothetical protein [impor... 124 7e-29
TC90470 weakly similar to GP|9294219|dbj|BAB02121.1 gb|AAF01563.... 115 4e-26
AL389254 weakly similar to GP|7523514|dbj| Similar to Arabidopsi... 107 1e-23
BI309522 similar to PIR|A86198|A86 hypothetical protein [importe... 102 5e-22
BG457660 similar to PIR|T00472|T00 probable RING3 protein [impor... 85 6e-17
TC82844 similar to PIR|A86198|A86198 hypothetical protein [impor... 42 5e-04
TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Gl... 41 0.001
TC83068 similar to GP|9279622|dbj|BAB01080.1 gene_id:MOJ10.6~unk... 40 0.002
TC79079 similar to GP|19698893|gb|AAL91182.1 splicing factor pu... 40 0.003
TC77387 similar to GP|15983396|gb|AAL11566.1 At1g51440/F5D21_19 ... 39 0.004
TC86556 similar to PIR|T07598|T07598 proline-rich protein GPP1 -... 39 0.005
BQ144307 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 39 0.007
TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 ... 39 0.007
TC91642 similar to PIR|E96613|E96613 hypothetical protein T15M6.... 38 0.012
BF636094 similar to GP|15983759|g At1g05910/T20M3_16 {Arabidopsi... 38 0.012
AL373052 similar to GP|21593014|gb| putative aldolase {Arabidops... 38 0.012
BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus... 37 0.015
TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans P... 37 0.015
>TC77943 similar to GP|10179602|gb|AAG13810.1 PSTVd RNA-binding protein
Virp1a {Lycopersicon esculentum}, partial (43%)
Length = 1783
Score = 589 bits (1518), Expect(2) = e-180
Identities = 299/343 (87%), Positives = 304/343 (88%), Gaps = 7/343 (2%)
Frame = +3
Query: 130 RPFPAEKELKRSK-------SEVGSAMKACGQILQKLMKTKIGWIFSSPVDPVALNLHDY 182
R FPA +L R + + + KACGQILQKLMKTKIGWIFSSPVDPVALNLHDY
Sbjct: 564 RSFPAINDLSRRRRN*RDQSQRLEAQ*KACGQILQKLMKTKIGWIFSSPVDPVALNLHDY 743
Query: 183 FDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKF 242
FDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKF
Sbjct: 744 FDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAMQLLEKF 923
Query: 243 EELYRPIQEKFDEKSFDDELQASSWNHVEPERERERVKKKDNPIPIPPPVAKRQELLPEP 302
EELYRPIQEKFDEKSFDDELQASSWNHVEPERERERVKKKDNPIPIPPPVAKRQELLPEP
Sbjct: 924 EELYRPIQEKFDEKSFDDELQASSWNHVEPERERERVKKKDNPIPIPPPVAKRQELLPEP 1103
Query: 303 ASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLG 362
ASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLG
Sbjct: 1104ASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLG 1283
Query: 363 LQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIK 422
LQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKM
Sbjct: 1284LQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKM----- 1448
Query: 423 RQALMDNNNVPSNKGNGELPDREKVDATPPSEGKKQKKIDTVD 465
ELPDREKVDATPPSEGKKQKKIDTV+
Sbjct: 1449-----------------ELPDREKVDATPPSEGKKQKKIDTVE 1526
Score = 305 bits (780), Expect = 4e-83
Identities = 150/150 (100%), Positives = 150/150 (100%)
Frame = +2
Query: 1 MASAVLANRNEPNWPQHRGGGAGFMGKVPYANPNPNPKFKRNQSPSDDASSINRRSNDVV 60
MASAVLANRNEPNWPQHRGGGAGFMGKVPYANPNPNPKFKRNQSPSDDASSINRRSNDVV
Sbjct: 197 MASAVLANRNEPNWPQHRGGGAGFMGKVPYANPNPNPKFKRNQSPSDDASSINRRSNDVV 376
Query: 61 TNHSQYVTFNVSSYSKSELNELRNCFVTELEQIRQLQTRIESGELKSRSSHNGGGSAKKS 120
TNHSQYVTFNVSSYSKSELNELRNCFVTELEQIRQLQTRIESGELKSRSSHNGGGSAKKS
Sbjct: 377 TNHSQYVTFNVSSYSKSELNELRNCFVTELEQIRQLQTRIESGELKSRSSHNGGGSAKKS 556
Query: 121 ANKKFSGNKRPFPAEKELKRSKSEVGSAMK 150
ANKKFSGNKRPFPAEKELKRSKSEVGSAMK
Sbjct: 557 ANKKFSGNKRPFPAEKELKRSKSEVGSAMK 646
Score = 62.4 bits (150), Expect(2) = e-180
Identities = 30/34 (88%), Positives = 33/34 (96%)
Frame = +2
Query: 484 IEKDKDMGGTGGRASSSSSGSSSSGSGDSSSSET 517
+ KDKDMGGTGGRASSSSSGSSSSGSGDSSSS++
Sbjct: 1583 LRKDKDMGGTGGRASSSSSGSSSSGSGDSSSSDS 1684
Score = 49.7 bits (117), Expect = 3e-06
Identities = 21/32 (65%), Positives = 28/32 (86%)
Frame = +1
Query: 455 GKKQKKIDTVDEDVDIGDDMPANDFPPVEIEK 486
G+ +++ ++EDVDIGDDMPANDFPPVEIE+
Sbjct: 1495 GRNRRR*ILLNEDVDIGDDMPANDFPPVEIEE 1590
>TC77944 similar to GP|10179602|gb|AAG13810.1 PSTVd RNA-binding protein
Virp1a {Lycopersicon esculentum}, partial (27%)
Length = 1144
Score = 376 bits (966), Expect(2) = e-114
Identities = 188/199 (94%), Positives = 189/199 (94%)
Frame = +1
Query: 320 SPVRTPSPTRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIR 379
SPVR PSP RALPVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIR
Sbjct: 4 SPVRLPSPMRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIR 183
Query: 380 KRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNG 439
KRNGHLEQDGDEIELDMEA DTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNG
Sbjct: 184 KRNGHLEQDGDEIELDMEAGDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNG 363
Query: 440 ELPDREKVDATPPSEGKKQKKIDTVDEDVDIGDDMPANDFPPVEIEKDKDMGGTGGRASS 499
ELPDREKVDATPPSEGKKQKKIDTVDEDVDIGDDMPAN+FPPVEIEKDKDMG TGG ASS
Sbjct: 364 ELPDREKVDATPPSEGKKQKKIDTVDEDVDIGDDMPANNFPPVEIEKDKDMGATGGGASS 543
Query: 500 SSSGSSSSGSGDSSSSETS 518
SSSGSSSSGS SSS S
Sbjct: 544 SSSGSSSSGSDSSSSDSDS 600
Score = 53.9 bits (128), Expect(2) = e-114
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +2
Query: 525 IRIQGVLQEVILKLAMVICSRAGLLVLMITKTN 557
IRIQGVLQEV LK AMVICSR GLLVLM+ +TN
Sbjct: 590 IRIQGVLQEVTLKRAMVICSRVGLLVLMVIETN 688
>TC84035 similar to PIR|A86198|A86198 hypothetical protein [imported] -
Arabidopsis thaliana, partial (18%)
Length = 768
Score = 124 bits (312), Expect = 7e-29
Identities = 85/207 (41%), Positives = 113/207 (54%), Gaps = 1/207 (0%)
Frame = +2
Query: 313 NPPPLAQSPVRTPSPTRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQILPPEKME 372
NP L +S RTP+P KPKA DP+KR+M EK KL LQ LPP+K++
Sbjct: 68 NPMSLTRS-ARTPAPK-----------KPKANDPDKRDMTYYEKQKLSTHLQNLPPDKLD 211
Query: 373 QVVQIIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNV 432
+VQII+K+N L Q DEIE+D+++VD ETLWELDR VTN+KK +SK KR+A
Sbjct: 212 AIVQIIKKQNSALSQHDDEIEVDIDSVDAETLWELDRYVTNYKKSLSKYKRKA------- 370
Query: 433 PSNKGNGELPDREKVDATPPSEGKKQKKIDTVDEDVD-IGDDMPANDFPPVEIEKDKDMG 491
EL + + +A ++ K Q+ V+ + D+ PV+ E D
Sbjct: 371 -------ELAIQARAEAERIAQQKSQEPPVIVEAPRERQADERNDPSSLPVQGEIRVD-- 523
Query: 492 GTGGRASSSSSGSSSSGSGDSSSSETS 518
G + SSSSS SS SGS S S S
Sbjct: 524 -NGSKTSSSSSSSSDSGSSSSDSDSDS 601
>TC90470 weakly similar to GP|9294219|dbj|BAB02121.1
gb|AAF01563.1~gene_id:K17E12.8~similar to unknown
protein {Arabidopsis thaliana}, partial (11%)
Length = 772
Score = 115 bits (288), Expect = 4e-26
Identities = 69/191 (36%), Positives = 104/191 (54%), Gaps = 3/191 (1%)
Frame = +3
Query: 60 VTNHSQYVTFNVSSYSKSELNELRNCFVTELEQIRQLQTRIESGELKSRSSHNGGGSAKK 119
VT+HS +++ + +L+ F T+ ++ + + GE S+ NG + K
Sbjct: 201 VTSHSPVFITMIATEIIAPATKLKIKFSTKRIEVVS-GPKCQFGEKVSQLDENGRCNPIK 377
Query: 120 SANKKFSGNKRP---FPAEKELKRSKSEVGSAMKACGQILQKLMKTKIGWIFSSPVDPVA 176
++ S + P K ++ GS C IL+ L+ W+F +PVDPVA
Sbjct: 378 KSSLLGSNKREPSGNIEGPKNKRQKLDRKGS--HKCATILKCLISHPYSWVFKTPVDPVA 551
Query: 177 LNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDVNTAAM 236
LN+ DYF +I HPMDLGT+K KL KN Y + EFA DV+LTF NA+TYNP +DV+ A
Sbjct: 552 LNIPDYFTVISHPMDLGTIKFKLDKNIYYSKEEFAADVRLTFSNAMTYNPPSNDVHLMAK 731
Query: 237 QLLEKFEELYR 247
+L + FE ++
Sbjct: 732 ELNKLFERKWK 764
>AL389254 weakly similar to GP|7523514|dbj| Similar to Arabidopsis thaliana
chromosome II BAC F19I3 genomic sequence; putative RING3
protein, partial (18%)
Length = 491
Score = 107 bits (267), Expect = 1e-23
Identities = 57/108 (52%), Positives = 71/108 (64%)
Frame = +3
Query: 317 LAQSPVRTPSPTRALPVKPLKQPKPKARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQ 376
L +S TPS P KPKA+DPNKR+M +EK KL LQ LP EK++ VVQ
Sbjct: 123 LQRSMNNTPSSRTPAP------KKPKAKDPNKRDMTYDEKQKLSTSLQSLPVEKLDAVVQ 284
Query: 377 IIRKRNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQ 424
++RK+N L Q DEIE+D +AVD E LWELDR V N+KK +SK KR+
Sbjct: 285 MMRKKNLELNQQDDEIEVDFDAVDAEILWELDRFVLNYKKSLSKNKRK 428
>BI309522 similar to PIR|A86198|A86 hypothetical protein [imported] -
Arabidopsis thaliana, partial (17%)
Length = 729
Score = 102 bits (253), Expect = 5e-22
Identities = 54/113 (47%), Positives = 69/113 (60%), Gaps = 15/113 (13%)
Frame = +1
Query: 121 ANKKFSGNKRPFPAEKELKRSKSE---------------VGSAMKACGQILQKLMKTKIG 165
+N +F K FP + K+SKS V +K C +L+KLMK K G
Sbjct: 391 SNSEFLLAKDKFPPAESNKKSKSHGKKHGVGEMGHGFGIVSKYLKNCSSLLEKLMKHKHG 570
Query: 166 WIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTF 218
W+F++PVD L LHDYF II PMDLGTVKS+L+KN Y +P EFA+DV+LTF
Sbjct: 571 WVFNTPVDVERLGLHDYFIIISQPMDLGTVKSRLSKNWYKSPKEFAEDVRLTF 729
>BG457660 similar to PIR|T00472|T00 probable RING3 protein [imported] -
Arabidopsis thaliana, partial (34%)
Length = 654
Score = 85.1 bits (209), Expect = 6e-17
Identities = 49/126 (38%), Positives = 71/126 (55%), Gaps = 6/126 (4%)
Frame = +3
Query: 154 QILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKL-AKN--AYSTPAEF 210
Q ++ + K W F PVD L LHDY++II PMD GT+K+K+ AK+ Y E
Sbjct: 81 QYYXQITQHKWAWPFLEPVDVEGLGLHDYYEIIDKPMDFGTIKNKMEAKDGTGYKNVREI 260
Query: 211 ADDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEE---LYRPIQEKFDEKSFDDELQASSW 267
DV+L FKNA+ YN + HDV+ A L+EKFE+ L P + +++ ++E Q
Sbjct: 261 YADVRLIFKNAMKYNNEKHDVHVMAKTLMEKFEDKWLLLLPKVAEEEKRQIEEEAQVQMD 440
Query: 268 NHVEPE 273
H+ E
Sbjct: 441 IHLAQE 458
>TC82844 similar to PIR|A86198|A86198 hypothetical protein [imported] -
Arabidopsis thaliana, partial (9%)
Length = 834
Score = 42.4 bits (98), Expect = 5e-04
Identities = 18/32 (56%), Positives = 25/32 (77%)
Frame = +2
Query: 393 ELDMEAVDTETLWELDRLVTNWKKMVSKIKRQ 424
E+D+++VD ETLWELDR VTN+KK I+ +
Sbjct: 38 EVDIDSVDAETLWELDRYVTNYKKKFE*IQEE 133
Score = 37.0 bits (84), Expect = 0.020
Identities = 35/138 (25%), Positives = 57/138 (40%)
Frame = +3
Query: 381 RNGHLEQDGDEIELDMEAVDTETLWELDRLVTNWKKMVSKIKRQALMDNNNVPSNKGNGE 440
RN L Q DE++ + L ++ +K +SK KR+A +
Sbjct: 3 RNSALPQHDDEMKWTLIVWMQRLFGSLTDMLPTIRKSLSKYKRRA--------------D 140
Query: 441 LPDREKVDATPPSEGKKQKKIDTVDEDVDIGDDMPANDFPPVEIEKDKDMGGTGGRASSS 500
+ + +A ++ K Q+ VD + D N P + ++ + + G + SSS
Sbjct: 141 FAIQARAEAERIAQQKSQEPPVIVDSPRERQAD-ERNASPSLAVQGEIRVDNNGNKTSSS 317
Query: 501 SSGSSSSGSGDSSSSETS 518
SS SS SGS S S S
Sbjct: 318 SSSSSDSGSSTSDSDSDS 371
>TC91327 similar to GP|22597168|gb|AAN03471.1 unknown protein {Glycine max},
partial (70%)
Length = 738
Score = 40.8 bits (94), Expect = 0.001
Identities = 30/93 (32%), Positives = 38/93 (40%)
Frame = +1
Query: 243 EELYRPIQEKFDEKSFDDELQASSWNHVEPERERERVKKKDNPIPIPPPVAKRQELLPEP 302
E+ P + K EK + E EPE+ +E K K+ P P PPP K PEP
Sbjct: 346 EKPKEPEKPKNPEKPKEPEKPKEPEKPKEPEKPKEPEKPKEKPAP-PPPEPK-----PEP 507
Query: 303 ASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKP 335
+P PP P P P +PV P
Sbjct: 508 PKQPEKPKEKPAPP----PQPMPEPAPYIPVCP 594
Score = 37.0 bits (84), Expect = 0.020
Identities = 27/99 (27%), Positives = 42/99 (42%)
Frame = +1
Query: 243 EELYRPIQEKFDEKSFDDELQASSWNHVEPERERERVKKKDNPIPIPPPVAKRQELLPEP 302
E+ P++ K EK + E + EPE+ +E K K+ P P K + P P
Sbjct: 310 EKPKEPVKPKEPEKPKEPEKPKNPEKPKEPEKPKEPEKPKEPEKPKEPEKPKEKPAPPPP 489
Query: 303 ASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKP 341
+P PP + P P+P P +P+ +P P
Sbjct: 490 -----EPK-PEPPKQPEKPKEKPAP----PPQPMPEPAP 576
>TC83068 similar to GP|9279622|dbj|BAB01080.1 gene_id:MOJ10.6~unknown
protein {Arabidopsis thaliana}, partial (8%)
Length = 493
Score = 40.0 bits (92), Expect = 0.002
Identities = 25/70 (35%), Positives = 33/70 (46%)
Frame = +2
Query: 273 ERERERVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALP 332
E ++ V ++ P+PP L EP TSNQ ST N PP P +P P LP
Sbjct: 170 ENDQSYVPSQNPQQPLPP------FSLSEPTQTSNQQSTPNEPP--PPPSSSPPPLPPLP 325
Query: 333 VKPLKQPKPK 342
P + P P+
Sbjct: 326 PTPQQYPVPQ 355
>TC79079 similar to GP|19698893|gb|AAL91182.1 splicing factor putative
{Arabidopsis thaliana}, partial (17%)
Length = 1114
Score = 39.7 bits (91), Expect = 0.003
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Frame = +1
Query: 271 EPERERERVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTS-----NPPPLAQSPVRTP 325
+P + + IPIPPP + +P P + PS+ +PPP Q P
Sbjct: 181 QPPPMHPSISMNNQGIPIPPPPGSQFTPVPRPYAPHPHPSSGMMPMMHPPPPPQGVPPPP 360
Query: 326 SPTRALPVKPLKQPKPKARDPNKREMNVEEK 356
P A P P ++P+PK + + + E+K
Sbjct: 361 PPEEAPPPLP-EEPEPKRQKHDDSALIPEDK 450
>TC77387 similar to GP|15983396|gb|AAL11566.1 At1g51440/F5D21_19
{Arabidopsis thaliana}, partial (75%)
Length = 1793
Score = 39.3 bits (90), Expect = 0.004
Identities = 23/49 (46%), Positives = 28/49 (56%)
Frame = -2
Query: 470 IGDDMPANDFPPVEIEKDKDMGGTGGRASSSSSGSSSSGSGDSSSSETS 518
IG + P+ F P GG+G +SSSSS SSSS S SSSS +S
Sbjct: 475 IGSNRPSQSFSPWISLHTSLNGGSGDSSSSSSSSSSSSSSSSSSSSSSS 329
Score = 29.3 bits (64), Expect = 4.2
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 298 LLPEPASTSNQPSTSNP-----PPLAQSPVRTPSPTRALPVKPLKQPKPKARDPNKREMN 352
+LP P + PST+NP P +R + AL ++PL K + KR+M
Sbjct: 178 ILPIPTISFQNPSTTNPTSFSFPIPKNLIIRQYYSSNALLLRPL*TNCTKRKRKRKRKMK 357
Query: 353 VEEKHK 358
+++K K
Sbjct: 358 MKKKKK 375
>TC86556 similar to PIR|T07598|T07598 proline-rich protein GPP1 - potato,
partial (24%)
Length = 1250
Score = 38.9 bits (89), Expect = 0.005
Identities = 21/62 (33%), Positives = 27/62 (42%), Gaps = 7/62 (11%)
Frame = +3
Query: 287 PIPPPVAKRQELLPEPASTSNQP-------STSNPPPLAQSPVRTPSPTRALPVKPLKQP 339
P+PPPV + LP P ++P PPP + PV P+P P P QP
Sbjct: 114 PLPPPVPVYHKPLPPPTPVYHKPLPPPVPVKKPCPPPKVEHPVLPPAPVYKPPPVPKPQP 293
Query: 340 KP 341
P
Sbjct: 294 PP 299
Score = 33.9 bits (76), Expect = 0.17
Identities = 19/58 (32%), Positives = 28/58 (47%), Gaps = 3/58 (5%)
Frame = +3
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVK---PLKQPKP 341
P+PPPV + LP P +P P P+ P+ P+P P+ P+K+P P
Sbjct: 48 PLPPPVPVYHKPLPPPTPVYEKP-LPPPVPVYHKPLPPPTPVYHKPLPPPVPVKKPCP 218
Score = 33.9 bits (76), Expect = 0.17
Identities = 25/89 (28%), Positives = 37/89 (41%)
Frame = +3
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQPKPKARDP 346
P+PPP ++ LP P ++P P P+ + P+ P P KPL P P P
Sbjct: 15 PLPPPTPVYEKPLPPPVPVYHKP-LPPPTPVYEKPLPPPVPVYH---KPLPPPTPVYHKP 182
Query: 347 NKREMNVEEKHKLGLGLQILPPEKMEQVV 375
+ V++ PP K+E V
Sbjct: 183 LPPPVPVKKP---------CPPPKVEHPV 242
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/59 (38%), Positives = 27/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 285 PIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPT-RALPVK-PLKQPKP 341
P+ PPPV K Q P P P P L PV P P +ALP P+K+P P
Sbjct: 255 PVYKPPPVPKPQPP-PVPVKKPCPPPKVEHPVLPPVPVYKPPPVPKALPPPVPIKKPCP 428
Score = 30.0 bits (66), Expect = 2.4
Identities = 19/60 (31%), Positives = 24/60 (39%), Gaps = 5/60 (8%)
Frame = +3
Query: 287 PIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPT-----RALPVKPLKQPKP 341
P PPP + L P P PPP+ PV+ P P LP P+ +P P
Sbjct: 210 PCPPPKVEHPVLPPAPVYKPPPVPKPQPPPV---PVKKPCPPPKVEHPVLPPVPVYKPPP 380
>BQ144307 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (24%)
Length = 1059
Score = 38.5 bits (88), Expect = 0.007
Identities = 25/66 (37%), Positives = 30/66 (44%), Gaps = 1/66 (1%)
Frame = -2
Query: 284 NPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALP-VKPLKQPKPK 342
+P+PI PP R P P + + P T P P Q TPSP A P + P P P
Sbjct: 473 HPLPISPPPPLRPP--PPPLPSPDIPPTPTPAPRLQL---TPSPPHAPPPLNPSTHPPPN 309
Query: 343 ARDPNK 348
D NK
Sbjct: 308 KNDKNK 291
>TC78495 homologue to PIR|S53504|S53504 extensin-like protein S3 - alfalfa,
partial (97%)
Length = 1049
Score = 38.5 bits (88), Expect = 0.007
Identities = 25/70 (35%), Positives = 33/70 (46%), Gaps = 7/70 (10%)
Frame = +3
Query: 284 NPIPI---PPPVAKRQELL---PEPASTSNQPSTSNPPPLAQSPVRTP-SPTRALPVKPL 336
+P P+ PPPV L P PA ++ P S+PPP+ QSP TP +P P
Sbjct: 318 SPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSPPPVQQSPPPTPLTPPPVQSTPPP 497
Query: 337 KQPKPKARDP 346
P P + P
Sbjct: 498 ASPPPASPPP 527
Score = 33.9 bits (76), Expect = 0.17
Identities = 22/67 (32%), Positives = 29/67 (42%), Gaps = 2/67 (2%)
Frame = +3
Query: 282 KDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALP-VKPLKQP- 339
+ P P PP A P PA+ P + PPP P TP+P + P P P
Sbjct: 480 QSTPPPASPPPASPPPFSPPPAT----PPPATPPPATPPPALTPTPLSSPPATTPAPAPA 647
Query: 340 KPKARDP 346
K K++ P
Sbjct: 648 KLKSKAP 668
Score = 32.0 bits (71), Expect = 0.64
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +3
Query: 282 KDNPIPI---PPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPLKQ 338
+ P P+ PPPV + P P + P S PPP A P +P P P P
Sbjct: 396 QSTPPPVQSSPPPVQQS----PPPTPLTPPPVQSTPPP-ASPPPASPPPFSPPPATPPPA 560
Query: 339 PKPKARDP 346
P A P
Sbjct: 561 TPPPATPP 584
Score = 30.8 bits (68), Expect = 1.4
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +3
Query: 284 NPIPIPP-PVAKRQELLPEPASTSNQPSTSNPPPLAQSP---VRTPSPTRALPVKPLKQP 339
N P PP P A P+ S P S+PPP+ SP +P P ++ P P
Sbjct: 258 NSSPAPPTPPANTPPTTPQ---ASPPPVQSSPPPVQSSPPPLQSSPPPAQSTPPPVQSSP 428
Query: 340 KPKARDP 346
P + P
Sbjct: 429 PPVQQSP 449
Score = 30.8 bits (68), Expect = 1.4
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 279 VKKKDNPIPI-PPPVAKRQELLPEPASTSN-QPSTSNPPPLAQSPVRTP--SPTRALPVK 334
V++ P P+ PPPV + P PAS P +PPP P P +P AL
Sbjct: 435 VQQSPPPTPLTPPPV----QSTPPPASPPPASPPPFSPPPATPPPATPPPATPPPALTPT 602
Query: 335 PLKQP 339
PL P
Sbjct: 603 PLSSP 617
>TC91642 similar to PIR|E96613|E96613 hypothetical protein T15M6.22
[imported] - Arabidopsis thaliana, partial (11%)
Length = 949
Score = 37.7 bits (86), Expect = 0.012
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 155 ILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPM 190
I++K+MK F+ PV+P AL + DYFDII PM
Sbjct: 840 IIRKVMKMDAAEPFNVPVNPEALGIPDYFDIIDTPM 947
>BF636094 similar to GP|15983759|g At1g05910/T20M3_16 {Arabidopsis thaliana},
partial (12%)
Length = 503
Score = 37.7 bits (86), Expect = 0.012
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 181 DYFDIIKHPMDLGTVKSKLAKNAYSTPAEFADDVKLTFKNALTYNPKGHDVN 232
+Y II++PMD+ T+ + Y T A F D+ L NA YN G D N
Sbjct: 196 NYRSIIQNPMDIATILQHVDNGNYITCAAFLQDIDLIVSNARAYN--GDDYN 345
>AL373052 similar to GP|21593014|gb| putative aldolase {Arabidopsis
thaliana}, partial (19%)
Length = 459
Score = 37.7 bits (86), Expect = 0.012
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +3
Query: 277 ERVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPPPLAQSPVRTPSPTRALPVKPL 336
ER++ NP P PP + P P +TSN S P A S +PSP P+ P
Sbjct: 153 ERIRHFSNPSPTTPPSQSPPQPPPHPTATSNPVSVLMKPSTASS--SSPSP----PLSPK 314
Query: 337 KQPKP 341
P P
Sbjct: 315 SPPSP 329
>BQ140761 weakly similar to GP|18076245|emb phosphophoryn {Rattus
norvegicus}, partial (9%)
Length = 620
Score = 37.4 bits (85), Expect = 0.015
Identities = 27/91 (29%), Positives = 37/91 (39%), Gaps = 4/91 (4%)
Frame = +1
Query: 428 DNNNVPSNKGNGELPDREKVDATPPSEGKKQKKIDTVDEDVDIGDDMPANDFPPVEIEK- 486
D+++ + + D E V A + KK KK +V D DD + E
Sbjct: 316 DSDDSSDSSSDDSSSDEEPVPAPKKEKAKKAKKAKSVSSSSDSSDDSSSESESEPEPXNV 495
Query: 487 ---DKDMGGTGGRASSSSSGSSSSGSGDSSS 514
+ D + S SSS SSS S DSSS
Sbjct: 496 PLPESDDSSSASSDSDSSSDSSSDSSSDSSS 588
>TC81718 weakly similar to GP|22532805|gb|AAM97960.1 C. elegans PQN-75
protein (corresponding sequence W03D2.1b)
{Caenorhabditis elegans}, partial (10%)
Length = 546
Score = 37.4 bits (85), Expect = 0.015
Identities = 22/65 (33%), Positives = 27/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 278 RVKKKDNPIPIPPPVAKRQELLPEPASTSNQPSTSNPP-PLAQSPVRTPSPTRALPVKPL 336
R+ + P PP LP+P + S P S PP P SP +P PT P P
Sbjct: 249 RIGPRSPPTTGSPPTRPPSSPLPDPTTGSPPPPGSPPPDPTPGSPPPSPDPTPGSPPPPG 428
Query: 337 KQPKP 341
P P
Sbjct: 429 SPPDP 443
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.310 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,683,728
Number of Sequences: 36976
Number of extensions: 249580
Number of successful extensions: 5893
Number of sequences better than 10.0: 330
Number of HSP's better than 10.0 without gapping: 2819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4513
length of query: 559
length of database: 9,014,727
effective HSP length: 101
effective length of query: 458
effective length of database: 5,280,151
effective search space: 2418309158
effective search space used: 2418309158
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Medicago: description of AC144564.17