BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144539.4 - phase: 0
(587 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BQ136987 447 e-126
TC77063 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 ... 191 9e-49
TC76809 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 ... 181 5e-46
AL388510 170 1e-42
TC79190 similar to PIR|E96542|E96542 scarecrow-like protein [imp... 142 4e-34
TC86258 similar to GP|16930433|gb|AAL31902.1 AT4g17230/dl4650c {... 140 1e-33
TC78035 similar to GP|8778540|gb|AAF79548.1| F22G5.9 {Arabidopsi... 140 2e-33
TC89212 weakly similar to PIR|T02531|T02531 probable SCARECROW g... 129 2e-30
TC77716 similar to GP|20465587|gb|AAM20276.1 unknown protein {Ar... 127 2e-29
TC77707 weakly similar to GP|8777405|dbj|BAA96995.1 SCARECROW ge... 125 6e-29
TC90401 similar to GP|9454566|gb|AAF87889.1| scarecrow-like 3 pr... 98 3e-21
TC82600 similar to GP|9757937|dbj|BAB08425.1 SCARECROW gene regu... 92 6e-19
BM813961 homologue to GP|13365610|db SCARECROW {Pisum sativum}, ... 90 2e-18
TC77895 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 ... 87 2e-17
TC80896 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 ... 86 3e-17
TC80047 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 ... 86 3e-17
BE326037 similar to GP|18491223|gb putative SHORT-ROOT (SHR) pro... 86 4e-17
TC79937 similar to GP|14517552|gb|AAK62666.1 F17J6.12/F17J6.12 {... 82 4e-16
TC90344 weakly similar to PIR|H86282|H86282 protein F10B6.34 [im... 78 8e-15
BI308453 weakly similar to PIR|T02736|T0 probable SCARECROW gene... 77 1e-14
>BQ136987
Length = 681
Score = 447 bits (1149), Expect = e-126
Identities = 220/223 (98%), Positives = 221/223 (98%)
Frame = +2
Query: 33 NEMKNVQFSVAEDLGDYNGIESLCSNFGFFQDDPSYQENEFLKFHHQQQESYQDYETFDN 92
+EMKNVQFSVAEDLGDYNGIESLCSNFGFFQDDPSYQENEFLKFHHQQQESYQDYETFDN
Sbjct: 8 DEMKNVQFSVAEDLGDYNGIESLCSNFGFFQDDPSYQENEFLKFHHQQQESYQDYETFDN 187
Query: 93 LHFDMVHFGDTKKDQPFYQTPLAPVDILKNYGKGFKRLLPDDEGNILHPVNDFGLVTNNE 152
LHFDMVHFGDTKKDQPFYQTPLAPVDILKNYGKGFKRLLPDDEGNILHPVNDFGLVTNNE
Sbjct: 188 LHFDMVHFGDTKKDQPFYQTPLAPVDILKNYGKGFKRLLPDDEGNILHPVNDFGLVTNNE 367
Query: 153 NEKKLLSTIEIMKMAGTRFIQSSSSSKSASGLILNHPFGFSFSGLSDEEKENVSLAESLL 212
NEKKLLSTIEIMKMAGTRFIQSSSSSKSASGLILNHPFGFSFSGLSDEEKENVSLAESLL
Sbjct: 368 NEKKLLSTIEIMKMAGTRFIQSSSSSKSASGLILNHPFGFSFSGLSDEEKENVSLAESLL 547
Query: 213 ACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEAL 255
ACAEKVGYQQYERA KLLSQIESLSSKTGNP KRVVHYFAEAL
Sbjct: 548 ACAEKVGYQQYERAXKLLSQIESLSSKTGNPXKRVVHYFAEAL 676
>TC77063 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 {Vitis
vinifera}, partial (71%)
Length = 1762
Score = 191 bits (484), Expect = 9e-49
Identities = 128/389 (32%), Positives = 185/389 (46%), Gaps = 2/389 (0%)
Frame = +3
Query: 199 DEEKENVSLAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQR 258
+ +++ + L SL+ACAE V + A L+ QI L+ +++V YFAE L +R
Sbjct: 576 ETQEKGIRLVHSLMACAEAVEQNNLKMAEALVKQIGYLAVSQEGAMRKVATYFAEGLARR 755
Query: 259 IDKETGRFSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENV 318
I +F VS L I YE P + + FT QA+LE
Sbjct: 756 I-----------------YGVFPQHSVSDSLQ---IHFYETCPNLKFAHFTANQAILEAF 875
Query: 319 NDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKR 378
+HVID I +G QW LMQAL R P ++T I SD S H+ + G R
Sbjct: 876 QGKSSVHVIDFSINQGMQWPALMQALALRPGGP-PAFRLTGIGPPASDNSDHL-QQVGWR 1049
Query: 379 LKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSEET--VAVYSQFALRSKIQQPDKLET 436
L FAQ++++ F + V + L + + ++ S ET VAV S F L +P LE
Sbjct: 1050LAQFAQTIHVQFEYRGFVANSLADLDASMLELRSPETESVAVNSVFELHKLNARPGALEK 1229
Query: 437 IMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILE 496
+ VIR I P ++ V E EANHN +F++RF E+L Y+S FD E E +
Sbjct: 1230VFSVIRQIRPEIVTVVEQEANHNGPAFLDRFTESLHYYSTLFDSLEG--SSVEPQDKAMS 1403
Query: 497 SMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFAC 556
+Y I N+VA EG +R R+ ++ WR F G L + QA ++ FA
Sbjct: 1404EVYLGKQICNVVACEGTDRVERHETLNQWRNRFNSAGFSPVHLGSNAFKQASMLLALFAG 1583
Query: 557 GYACTFDMNGHCLLVGWKGTPINSVSVWK 585
G + N CL++GW P+ + S WK
Sbjct: 1584GDGYKVEENDGCLMLGWHTRPLIATSAWK 1670
>TC76809 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 {Vitis
vinifera}, partial (72%)
Length = 2764
Score = 181 bits (460), Expect = 5e-46
Identities = 119/401 (29%), Positives = 193/401 (47%), Gaps = 12/401 (2%)
Frame = +2
Query: 197 LSDEEKENVSLAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALC 256
L D ++ V L +L+ACAE + + + A L+ I L+S +++V YFA+AL
Sbjct: 1334 LVDTQETGVRLVHTLMACAEAIQQKNLKLAEALVKHISLLASLQTGAMRKVASYFAQALA 1513
Query: 257 QRIDKETGRFSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLE 316
+RI N + ++S F S+ L+ + YE P+ + + FT QA+LE
Sbjct: 1514 RRI---------YGNPEETIDSSF-----SEILH---MHFYESSPYLKFAHFTANQAILE 1642
Query: 317 NVNDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTG 376
A ++HVID +++G QW LMQAL R P ++T I +D + + + G
Sbjct: 1643 AFAGAGRVHVIDFGLKQGMQWPALMQALALRPGGP-PTFRLTGIGPPQADNTDAL-QQVG 1816
Query: 377 KRLKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSEETVAVYSQFALRSKIQQPDKLET 436
+L AQ++ + F F V + + + + +I E VAV S F L + + +P +E
Sbjct: 1817 WKLAQLAQTIGVQFEFRGFVCNSIADLDPNMLEIRPGEAVAVNSVFELHTMLARPGSVEK 1996
Query: 437 IMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFE------------TC 484
++ ++ INP ++ + E EANHN FV+RF EAL Y+S+ FD E +
Sbjct: 1997 VLNTVKKINPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSNSSSNNSNSNST 2176
Query: 485 MKGDEKNRFILESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSL 544
G ++ +Y I N+VA EG +R R+ + WR+ G L +
Sbjct: 2177 GLGSPSQDLLMSEIYLGKQICNVVAYEGVDRVERHETLTQWRSRMGSAGFEPVHLGSNAF 2356
Query: 545 YQAELVAKRFACGYACTFDMNGHCLLVGWKGTPINSVSVWK 585
QA + FA G + N CL++GW + + S WK
Sbjct: 2357 KQASTLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWK 2479
>AL388510
Length = 458
Score = 170 bits (431), Expect = 1e-42
Identities = 82/144 (56%), Positives = 105/144 (71%)
Frame = +3
Query: 444 INPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILESMYFSHG 503
I P +M+V E EA+ NS+SFVNRF+EALF++SA+FD ETCM +++ R I E + S G
Sbjct: 6 IKPCIMIVLETEASLNSQSFVNRFVEALFFYSAFFDMAETCMSEEDECRMITEGI-LSVG 182
Query: 504 IRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFACGYACTFD 563
+RNIVA EG ER RNVKIDVWR FF R+ MVET S +YQAELV+K F G C +
Sbjct: 183 LRNIVASEGRERTFRNVKIDVWRRFFARYRMVETRFSEACVYQAELVSKEFDDGKFCDVE 362
Query: 564 MNGHCLLVGWKGTPINSVSVWKFI 587
NG CL++GWKGTP+ S+S W+F+
Sbjct: 363 KNGKCLILGWKGTPMYSISAWRFL 434
>TC79190 similar to PIR|E96542|E96542 scarecrow-like protein [imported] -
Arabidopsis thaliana, partial (64%)
Length = 1669
Score = 142 bits (358), Expect = 4e-34
Identities = 117/467 (25%), Positives = 213/467 (45%), Gaps = 11/467 (2%)
Frame = +2
Query: 130 LLPDDEGNILHPVNDFGLVTNNENEKKLLSTIEIMKMAGTRFIQSSSSSKSASGLILNHP 189
L+ D ++ H +++ V N +E+++M T+ + S+S
Sbjct: 236 LIYHDHDDLRHKMSELESVMRGPN-------VEMLEMYDTKVQEESAS------------ 358
Query: 190 FGFSFSGLSDEEKENVS------LAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNP 243
F +++ K+NV L E L CA+ V E +++++ + S +G+P
Sbjct: 359 ----FLLEAEKWKKNVEMVSRGDLKEMLYTCAKAVDENDIETIEWMVTELRKIVSVSGSP 526
Query: 244 VKRVVHYFAEALCQRIDKETGRFSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFS 303
++R+ Y EAL +I +S+ +SL + +L M LYE P+
Sbjct: 527 IERLGAYMLEALVSKI---------ASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYF 679
Query: 304 QVSIFTCVQALLENVNDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIE-S 362
+ + A+ E + + ++H+ID +I +G QW L+QAL R P ++ +IT I+ S
Sbjct: 680 KFGYMSANGAIAEAMKEENEVHIIDFQIGQGTQWVSLIQALARRPGGPPKI-RITGIDDS 856
Query: 363 GNSDTSKHIVEDTGKRLKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSEETVAVYSQF 422
+S+ V+ G++L AQS ++PF F V V +R E F++ E VAV
Sbjct: 857 YSSNVRGGGVDIVGEKLLTLAQSCHVPFEFHAVRVYPS-EVRLEDFELRPNEAVAVNFAI 1033
Query: 423 ALR----SKIQQPDKLETIMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYF 478
L + + + ++R+ + ++P V+ + E E N N+ F+ RF+E + Y+SA +
Sbjct: 1034MLHHVPDESVNIHNHRDRLLRLAKHMSPKVVTLVEQEFNTNNAPFLQRFLETMNYYSAVY 1213
Query: 479 DCFETCMKGDEKNRFILESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETE 538
+ + + D K R +E + + N+VA EG ER R+ + WR FT G
Sbjct: 1214ESIDVVLPRDHKERINVEQHCLAREVVNLVACEGEERVERHELLSKWRMRFTMAGFTPYP 1393
Query: 539 LSMKSLYQAELVAKRFACGYACTFDMNGHCLLVGWKGTPINSVSVWK 585
LS + + + + Y T + L +GW + + W+
Sbjct: 1394LSSFINSSIKNLLESYRGHY--TLEERDGALFLGWMNQDLIASCAWR 1528
>TC86258 similar to GP|16930433|gb|AAL31902.1 AT4g17230/dl4650c {Arabidopsis
thaliana}, partial (62%)
Length = 2237
Score = 140 bits (354), Expect = 1e-33
Identities = 100/391 (25%), Positives = 190/391 (48%), Gaps = 6/391 (1%)
Frame = +3
Query: 200 EEKENVSLAESLLACAEKVGYQQYERARKLLSQI-ESLSSKTGNPVKRVVHYFAEALCQR 258
E + + E LL CA+ V AR + + + S G+P++R+ Y E L R
Sbjct: 840 ENIPKLDMKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVAGDPIQRLSAYLLEGLRAR 1019
Query: 259 IDKETGRFSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENV 318
++ +S + + K SL Q SK+L M LY+ P+ + + + + E +
Sbjct: 1020 LE-------LSGSLIYK--SLKCEQPTSKELMTYMHMLYQICPYFKFAYISANAVISEAM 1172
Query: 319 NDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHI-VEDTGK 377
+ +IH+ID +I +G QW +L++AL R P ++IT ++ S ++ ++ G+
Sbjct: 1173 ANESRIHIIDFQIAQGTQWQMLIEALARRPGGP-PFIRITGVDDSQSFHARGGGLQIVGE 1349
Query: 378 RLKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSEETVAVYSQFALRSKIQQPDKLET- 436
+L +FA+S + F F +S ++ E ++ E +AV F+L + +E
Sbjct: 1350 QLSNFARSRGVLFEFHSAAMSGC-EVQRENLRVSPGEALAVNFPFSLHHMPDESVSIENH 1526
Query: 437 ---IMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRF 493
++R++++++P V+ + E E+N N+ F RF+E + +++A F+ + D+K R
Sbjct: 1527 RDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETMDFYTAMFESIDVACTKDDKKRI 1706
Query: 494 ILESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKR 553
+E + I N++A EG ER R+ WR+ F+ G + +LS ++ + + K
Sbjct: 1707 SVEQNCVARDIVNMIACEGIERVERHEVFGKWRSRFSMAGFRQCQLSSSVMHSVQNMLKD 1886
Query: 554 FACGYACTFDMNGHCLLVGWKGTPINSVSVW 584
F Y + L +GW + + S W
Sbjct: 1887 FHQNY--WLEHRDGALYLGWMKRAMATSSAW 1973
>TC78035 similar to GP|8778540|gb|AAF79548.1| F22G5.9 {Arabidopsis thaliana},
partial (24%)
Length = 2694
Score = 140 bits (352), Expect = 2e-33
Identities = 110/395 (27%), Positives = 187/395 (46%), Gaps = 11/395 (2%)
Frame = +3
Query: 201 EKENVSLAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEAL-CQRI 259
+++ V L L+ CA+ V A +LL QI + SS +G+ +R+ HYFA A+ + +
Sbjct: 1170 KRDAVDLRTLLVLCAQAVSANDNRTANELLKQIRNHSSPSGDASQRMAHYFANAIEARMV 1349
Query: 260 DKETGRFSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVN 319
TG + + QKM S + D A PF + + F + +L+
Sbjct: 1350 GAGTGTQILYMS--QKMFS-------AADFLKAYQVFISACPFKKFAHFFANKMILKTAE 1502
Query: 320 DAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSD-TSKHIVEDTGKR 378
A+ +H+ID I G QW IL++ L S+ E L+IT IE + +E+TG+R
Sbjct: 1503 KAETLHIIDFGILYGFQWPILIKFL-SKVEGGPPKLRITGIEYPQAGFRPAERIEETGRR 1679
Query: 379 LKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSEETVAVYSQFALRS----KIQQPDKL 434
L ++ + N+ F + + + I+ E I S E VAV ++ I
Sbjct: 1680 LANYCERFNVSFEYKAIPSRNWETIQIEDLNIKSNEVVAVNCLVRFKNLHDETIDVNSPK 1859
Query: 435 ETIMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFI 494
+ ++++IR INP + V + + ++N+ F RF E+LF++SA FD ++T + + + R +
Sbjct: 1860 DAVLKLIRKINPHIFVQSIVNGSYNAPFFSTRFKESLFHYSAMFDMYDTLISRENEWRSM 2039
Query: 495 LESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQ-----AEL 549
+E + I N+VA EG ER R W+ R G + L + + + E
Sbjct: 2040 IEREFLGREIMNVVACEGFERVERPETYKQWQVRNLRAGFRQLPLDKEVMVRFRDKLREW 2219
Query: 550 VAKRFACGYACTFDMNGHCLLVGWKGTPINSVSVW 584
K F FD + + +L GWKG + + + W
Sbjct: 2220 YHKDF------VFDEDNNWMLQGWKGRIMYASAGW 2306
>TC89212 weakly similar to PIR|T02531|T02531 probable SCARECROW gene
regulator At2g37650 [imported] - Arabidopsis thaliana,
partial (37%)
Length = 1266
Score = 129 bits (325), Expect = 2e-30
Identities = 100/357 (28%), Positives = 167/357 (46%), Gaps = 13/357 (3%)
Frame = +1
Query: 241 GNPVKRVVHYFAEALCQRIDKETGRFS----VSSNNMQKMESLFDPQEVSKDLNPAMIAL 296
G+ ++R+ HYFA L R+ ET + ++ +M K LF
Sbjct: 4 GDGLQRLAHYFANGLEIRLAAETPSYQPLDVATAGDMLKAYKLFVTAS------------ 147
Query: 297 YEDLPFSQVSIFTCVQALLENVNDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLK 356
P +V+ + + + V + +HVID I G QW L++ L R P +L +
Sbjct: 148 ----PLQRVTNTLLTKTIFKIVKNESSVHVIDFGICYGFQWPCLVRRLSLRPGGPPKL-R 312
Query: 357 ITAIE---SGNSDTSKHIVEDTGKRLKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSE 413
IT IE G T + VE+TG+RL + + N+PF ++ + E+L KID
Sbjct: 313 ITGIELPQPGFRPTER--VEETGRRLAKYCKKFNVPFEYNFIAQKWETVCLEDL-KIDRN 483
Query: 414 ETVAVYSQFALRSKIQQPDKL----ETIMRVIRTINPIVMVVAEIEANHNSKSFVNRFIE 469
E V + L++ + L E ++++IR INP + + ++++ F+ RF E
Sbjct: 484 EITLVSCLYRLKNLPDETVALNCPREAVLKLIRKINPKIFFHGVVNGSYSAPFFLTRFKE 663
Query: 470 ALFYFSAYFDCFETCMKGDEKNRFILESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFF 529
AL++FS+ FD FE + ++ R +LE F N++A EGAER R W+
Sbjct: 664 ALYHFSSLFDMFEANVPCEDPQRLMLERGLFGRDAINVIACEGAERVERPETYKQWQVRN 843
Query: 530 TRFGMVETELSMKSLYQAELVAKRFACGYACTF--DMNGHCLLVGWKGTPINSVSVW 584
R G + + + + + K+ Y F D++G +L GWKG +N++S W
Sbjct: 844 KRAGFRQIRFDSDLVNETKAMVKK---EYHKDFVVDVDGKWVLQGWKGRILNALSAW 1005
>TC77716 similar to GP|20465587|gb|AAM20276.1 unknown protein {Arabidopsis
thaliana}, partial (63%)
Length = 2392
Score = 127 bits (318), Expect = 2e-29
Identities = 94/380 (24%), Positives = 168/380 (43%), Gaps = 5/380 (1%)
Frame = +3
Query: 211 LLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQRIDKETGRFSVSS 270
L CA + +A ++ + L S G P R+ Y E L R+ +S
Sbjct: 903 LYECASALSEGNEVKASAMIDDLRQLVSIQGEPSDRIAAYMVEGLAARL---------AS 1055
Query: 271 NNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVNDAKKIHVIDLE 330
+ ++L + S D AM L+E P + A+ E + D KK+H+ID +
Sbjct: 1056 SGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAISEAIKDDKKVHIIDFD 1235
Query: 331 IRKGCQWTILMQALQSRNECPLELLKITAIESGNS-DTSKHIVEDTGKRLKDFAQSLNIP 389
I +G Q+ L+Q L SR P +++T ++ S S + G+RL+ A+ L +P
Sbjct: 1236 INQGSQYITLIQTLASRPGKP-PYVRLTGVDDPESVQRSVGGLSIIGQRLEKLAEVLGLP 1412
Query: 390 FSFDIVVVSDLLHIREELFKIDSEETVAVYSQFALR----SKIQQPDKLETIMRVIRTIN 445
F F V + + + E + V F L + ++ + ++R+++++N
Sbjct: 1413 FEFRAVASRSSI-VTPSMLNCRPGEALVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLN 1589
Query: 446 PIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILESMYFSHGIR 505
P ++ V E + N N+ F+ RF+EA Y+SA F+ + + + ++R +E + I
Sbjct: 1590 PKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLPRESQDRVNVERQCLARDIV 1769
Query: 506 NIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFACGYACTFDMN 565
N++A EG +R R WRA G + +S + +++ Y +M
Sbjct: 1770 NVIACEGEDRIERYEVAGKWRARMKMAGFTSSPMSTNVKEAIRELIRQYCDKYKIIEEMG 1949
Query: 566 GHCLLVGWKGTPINSVSVWK 585
G L GW+ + S WK
Sbjct: 1950 G--LHFGWEDKNLIVASAWK 2003
>TC77707 weakly similar to GP|8777405|dbj|BAA96995.1 SCARECROW gene
regulator-like {Arabidopsis thaliana}, partial (65%)
Length = 2161
Score = 125 bits (313), Expect = 6e-29
Identities = 106/428 (24%), Positives = 188/428 (43%), Gaps = 11/428 (2%)
Frame = +2
Query: 168 GTRFIQSSSSSKSASGLILNHPFGFSFSGLSDEEKE-----NVSLAESLLACAEKVGYQQ 222
G+++IQS S ++S N +E+ + L + L+ACA+ +
Sbjct: 734 GSQYIQSQPSHVTSSSRQSNEAVHVEKRRKLEEDSSLQGFPSGDLKQLLIACAKAMAENN 913
Query: 223 YERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQRIDKETGRFSVSSNNMQKMESLFDP 282
E +L+ + S G P++R+ Y E L R + S N++ +P
Sbjct: 914 TELFDRLIETARNAVSINGEPIQRLGAYMVEGLVARTE-------ASGNSIYHALKCREP 1072
Query: 283 QEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVNDAKKIHVIDLEIRKGCQWTILMQ 342
+ ++L M L+E P+ + A+ E + IH+ID +I +G QW L+Q
Sbjct: 1073 E--GEELLTYMQLLFEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGTQWMTLLQ 1246
Query: 343 ALQSRNECPLELLKITAIESGNSDTSK-HIVEDTGKRLKDFAQSLNIPFSFDIVVVSDLL 401
AL +R ++IT I+ S ++ +E G+RL ++ IP F + V
Sbjct: 1247 ALAAR-PGGAPHVRITGIDDPVSKYARGKGLEVVGERLSLMSKKFGIPVEFHGIPVFG-P 1420
Query: 402 HIREELFKIDSEETVAVYSQFALR----SKIQQPDKLETIMRVIRTINPIVMVVAEIEAN 457
+ ++ I E +AV L + + + ++R++++++P V+ + E E+N
Sbjct: 1421 DVTRDMLDIRHGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVVTLVEQESN 1600
Query: 458 HNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILESMYFSHGIRNIVAEEGAERKS 517
N+ F NRFIE L Y+ A F+ + + + K R +E + I N++A EG ER
Sbjct: 1601 TNTTPFFNRFIETLDYYLAIFESIDVTLSRNSKERINVEQHCLARDIVNVIACEGKERVE 1780
Query: 518 RNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFAC-GYACTFDMNGHCLLVGWKGT 576
R+ W++ T G + LS Y ++ C T +L+GWK
Sbjct: 1781 RHELFGKWKSRLTMAGFRQCPLSS---YVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKSR 1951
Query: 577 PINSVSVW 584
+ S S W
Sbjct: 1952 NLISASAW 1975
>TC90401 similar to GP|9454566|gb|AAF87889.1| scarecrow-like 3 protein
{Arabidopsis thaliana}, partial (47%)
Length = 1253
Score = 97.8 bits (242), Expect(2) = 3e-21
Identities = 81/302 (26%), Positives = 125/302 (40%), Gaps = 63/302 (20%)
Frame = +3
Query: 322 KKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRLKD 381
+ IH+IDL + QW L+Q L + + P L +IT + K +++ RL
Sbjct: 42 RMIHIIDLNAAEPAQWISLLQVLSAHPDGPPHL-RITGVHQ-----KKEVLDQVAHRLIA 203
Query: 382 FAQSLNIPFSF--------------------DIVVVSDLLHIREELFKIDSEETVAVYSQ 421
A+ L+ PF F + + +S +L + L +D +ET+ S
Sbjct: 204 EAEKLDTPFQFNPVVSKLENLDFEKLRVKTGEALAISSILQLHT-LLALD-DETMKRKSP 377
Query: 422 FALR----------------------------SKIQQPDK---------------LETIM 438
L+ S + PD E +
Sbjct: 378 LLLKTSNGIHLQRFHPINRSTFDNLLEKDLISSYTRSPDSSSSSPASLKTSNSMNTEMFL 557
Query: 439 RVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILESM 498
+ +++P VMVV E ++NHN F +R +EAL ++A FDC E+ + RF +E +
Sbjct: 558 NALWSLSPKVMVVTEQDSNHNGSHFTDRLLEALHSYAALFDCLESTIPRTSLERFRVEKL 737
Query: 499 YFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFACGY 558
F I+NI+A EG ERK R+ K+D W F G LS Y +L A+RF Y
Sbjct: 738 LFGEEIKNIIACEGLERKERHEKLDKWFMRFDLAGFGNEPLS----YFGKLQARRFMQSY 905
Query: 559 AC 560
C
Sbjct: 906 GC 911
Score = 22.3 bits (46), Expect(2) = 3e-21
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +1
Query: 568 CLLVGWKGTPINSVSVWK 585
C+L+ W+ + S+S W+
Sbjct: 943 CVLICWQDRSLFSISAWR 996
>TC82600 similar to GP|9757937|dbj|BAB08425.1 SCARECROW gene regulator-like
protein {Arabidopsis thaliana}, partial (51%)
Length = 1141
Score = 92.0 bits (227), Expect = 6e-19
Identities = 63/197 (31%), Positives = 98/197 (48%), Gaps = 4/197 (2%)
Frame = +2
Query: 200 EEKENVSLAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQRI 259
EE + L LL CAE V + A LL +I LSS G +RV YFA+AL R+
Sbjct: 476 EESTGLKLLGLLLQCAECVAMDNLDFANDLLPEITELSSPFGTSPERVGAYFAQALQARV 655
Query: 260 DKE-TGRFS---VSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALL 315
G +S S + + + +F+ + ++P + + S FT QA+
Sbjct: 656 VSSCLGSYSPLTAKSVTLNQSQRIFNAFQSYNSVSPLV----------KFSHFTANQAIF 805
Query: 316 ENVNDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDT 375
+ ++ ++H+IDL+I +G QW L L SR++ KI ++ +S ++E T
Sbjct: 806 QALDGEDRVHIIDLDIMQGLQWPGLFHILASRSK------KIRSVRITGFGSSSELLEST 967
Query: 376 GKRLKDFAQSLNIPFSF 392
G+RL DFA SL +PF F
Sbjct: 968 GRRLADFASSLGLPFEF 1018
>BM813961 homologue to GP|13365610|db SCARECROW {Pisum sativum}, partial
(21%)
Length = 550
Score = 90.1 bits (222), Expect = 2e-18
Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Frame = -2
Query: 211 LLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQRIDKETGRFSVSS 270
LL CAE V + ++A K+L +I LS+ G +RV YF+EA+ R+ VSS
Sbjct: 543 LLQCAEAVSAENLDQANKMLLEISQLSTPFGTSAQRVAAYFSEAISARL--------VSS 388
Query: 271 NNMQKMESLFDPQEVSKDLNPAMIALYEDL-PFSQVSIFTCVQALLENVNDAKKIHVIDL 329
++ + P + + ++ + PF + S FT QA+ E + +++H+IDL
Sbjct: 387 --CLRIYATLPPHTLHNQKVASAFQVFNGISPFVKFSHFTANQAIQEAFDREERVHIIDL 214
Query: 330 EIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRLKDFAQSLNIP 389
+I +G QW L L SR P +++T + TS +E TGKRL DFA L +P
Sbjct: 213 DIMQGLQWPGLFHILASRPGGP-PYVRLTGL-----GTSMETLEATGKRLSDFASKLGLP 52
Query: 390 FSF 392
F F
Sbjct: 51 FEF 43
>TC77895 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 {Arabidopsis
thaliana}, partial (41%)
Length = 2591
Score = 87.0 bits (214), Expect = 2e-17
Identities = 91/381 (23%), Positives = 155/381 (39%), Gaps = 1/381 (0%)
Frame = +3
Query: 206 SLAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQRIDKETGR 265
++ + L AE + E A+ +L+++ S G P +R YF EAL +
Sbjct: 1308 AIIDQLFKAAELIDAGNPEHAQGILARLNHQISPMGKPFQRAAFYFKEAL---------Q 1460
Query: 266 FSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVNDAKKIH 325
+ SN + F P + + A + E P Q + FT QALLE V +IH
Sbjct: 1461 LLLQSNVNNSNNNSFSPTSLLLKIG-AYKSFSEISPVLQFANFTSNQALLEAVEGFDRIH 1637
Query: 326 VIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRLKDFAQS 385
+ID +I G QW+ MQ L RN LKITA S S + + T + L +A
Sbjct: 1638 IIDFDIGFGGQWSSFMQELALRNG-GAPALKITAFVS-PSHHDEIELSFTNENLMQYAGE 1811
Query: 386 LNIPFSFDIVVVSDLLHIREELFKIDSEETVAVYSQFALRSKIQQPDKLETIMRVIRTIN 445
+N+ F +I+ + L + D E AV + S P L ++R ++ +
Sbjct: 1812 INMSFELEILTLESLNSVSWPQPLRDCE---AVVVNLPICSFSNYPSYLPLVLRFVKQLM 1982
Query: 446 PIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRF-ILESMYFSHGI 504
P ++V + + F + AL +S + + + ++E Y I
Sbjct: 1983 PKIVVTLDRSCDRTDAPFPQHMVFALQSYSGLLESLDAVSVNVHPDVLQMIEKYYLQPAI 2162
Query: 505 RNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFACGYACTFDM 564
+V +S++ + W+ G S + QAE + +R G +
Sbjct: 2163 EKLVL---GRLRSQDRTLP-WKNLLLSSGFSPLTFSNFTESQAECLVQRIP-GRGFHVEK 2327
Query: 565 NGHCLLVGWKGTPINSVSVWK 585
+ L++ W+ + SVS W+
Sbjct: 2328 KQNSLVLCWQRKDLISVSTWR 2390
>TC80896 similar to GP|20334379|gb|AAM19210.1 GAI-like protein 1 {Vitis
vinifera}, partial (17%)
Length = 783
Score = 86.3 bits (212), Expect = 3e-17
Identities = 48/154 (31%), Positives = 74/154 (47%)
Frame = +1
Query: 434 LETIMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRF 493
+E ++ IR++NP ++ V E EANHN F+ RF EAL Y+S FD E C +K
Sbjct: 19 IEMVLGWIRSLNPKIVTVVEQEANHNENGFMERFTEALHYYSTVFDSLEACPVEPDK--- 189
Query: 494 ILESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKR 553
+ MY I N+V EG R R+ + W+ + G L + QA ++
Sbjct: 190 AMAEMYLQREICNVVCCEGPARVERHEPLVKWKERLGKAGFRPLHLGSNAFKQASMLLTL 369
Query: 554 FACGYACTFDMNGHCLLVGWKGTPINSVSVWKFI 587
F+ C + G L +GW P+ + S W+ +
Sbjct: 370 FSAEGYCVEENQG-SLTLGWHSRPLIAASAWQAV 468
>TC80047 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20
{Arabidopsis thaliana}, partial (30%)
Length = 1357
Score = 86.3 bits (212), Expect = 3e-17
Identities = 95/384 (24%), Positives = 161/384 (41%), Gaps = 4/384 (1%)
Frame = +2
Query: 206 SLAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQRIDKETGR 265
S+ + L AE + +A+ +L+++ S GNP +R Y EAL +
Sbjct: 35 SIFDQLFKTAELIEAGNPVQAQGILARLNHQLSPIGNPFQRASFYMKEALQLMLHS---- 202
Query: 266 FSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVNDAKKIH 325
+ NN+ + F P + A + E P Q + FTC Q+L+E + +IH
Sbjct: 203 ---NGNNL----TAFSPISFIFKIG-AYKSFSEISPVLQFANFTCNQSLIEALERFDRIH 358
Query: 326 VIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRLKDFAQS 385
VID +I G QW+ MQ + R+ LKITA+ S +S ++ + T + L +A+
Sbjct: 359 VIDFDIGFGVQWSSFMQEIVLRSN-GKPSLKITAVVSPSS-CNEIELNFTQENLSQYAKD 532
Query: 386 LNIPFSFDIVVVSDL----LHIREELFKIDSEETVAVYSQFALRSKIQQPDKLETIMRVI 441
LNI F F+++ + L + F DS E + V F + S I P + +
Sbjct: 533 LNILFEFNVLNIESLNLPSCPLPGHFF--DSNEAIGV--NFPVSSFISNPSCFPVALHFL 700
Query: 442 RTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILESMYFS 501
+ + P ++V + + + L +SA + + + + I E Y
Sbjct: 701 KQLRPKIVVTLDKNCDRMDVPLPTNVVHVLQCYSALLESLDAVNVNLDVLQKI-ERHYIQ 877
Query: 502 HGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKRFACGYACT 561
I IV +R K+ WR F + G S + QAE + +R A
Sbjct: 878 PTINKIVLSHHNQRD----KLPPWRNMFLQSGFSPFSFSNFTEAQAECLVQR-APVRGFQ 1042
Query: 562 FDMNGHCLLVGWKGTPINSVSVWK 585
+ L++ W+ + SVS W+
Sbjct: 1043VERKPSSLVLCWQRKELISVSTWR 1114
>BE326037 similar to GP|18491223|gb putative SHORT-ROOT (SHR) protein
{Arabidopsis thaliana}, partial (23%)
Length = 646
Score = 85.9 bits (211), Expect = 4e-17
Identities = 57/184 (30%), Positives = 101/184 (53%), Gaps = 3/184 (1%)
Frame = -1
Query: 320 DAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRL 379
+ K H+ID+ QW L++AL +RN+ LK+T + + NS +S ++++ G+R+
Sbjct: 583 ERKNFHIIDISNTLCTQWPTLLEALATRND-ETPHLKLTIVVTNNS-SSVVVMKEVGQRM 410
Query: 380 KDFAQSLNIPFSFDIVVVSDLLHIRE---ELFKIDSEETVAVYSQFALRSKIQQPDKLET 436
+ FA+ + +P F++ V+SDL HIRE E I E +A+ ALR K++ ++ E+
Sbjct: 409 EKFARLMGVP--FELNVISDLKHIRELTKERLGIQEGEAIALNCVGALR-KVEVEER-ES 242
Query: 437 IMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRFILE 496
+++ ++++P V+ E E + S FV F E L ++ YF+ E R +LE
Sbjct: 241 VVQFFKSLSPRVVTFVEEEGDFCSDDFVKCFEECLKFYRIYFEMLEESFPPTSNERLMLE 62
Query: 497 SMYF 500
F
Sbjct: 61 REVF 50
>TC79937 similar to GP|14517552|gb|AAK62666.1 F17J6.12/F17J6.12 {Arabidopsis
thaliana}, partial (28%)
Length = 886
Score = 82.4 bits (202), Expect = 4e-16
Identities = 55/212 (25%), Positives = 97/212 (44%), Gaps = 5/212 (2%)
Frame = +3
Query: 379 LKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSEETVAVYSQFALRSKIQQP-----DK 433
L A+S N+ F F + VS +R E ++ E +AV L + +
Sbjct: 3 LSKLAESYNVAFEFHAIGVSPS-EVRLEDLELRRGEAIAVNFAMMLHHVPDEDVHGGKNH 179
Query: 434 LETIMRVIRTINPIVMVVAEIEANHNSKSFVNRFIEALFYFSAYFDCFETCMKGDEKNRF 493
+ ++R+ + ++P V+ + E E+N N F RF+E + Y+ A F+ + + + + R
Sbjct: 180 RDRLVRLAKCLSPKVVTLVEQESNTNELPFFARFVETMNYYFAVFESIDVALPREHRERI 359
Query: 494 ILESMYFSHGIRNIVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMKSLYQAELVAKR 553
+E + + N+VA EGAER R+ + WR+ FT G LS Y + + +
Sbjct: 360 NVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTMAGFTPYPLSSYINYSIQNLLEN 539
Query: 554 FACGYACTFDMNGHCLLVGWKGTPINSVSVWK 585
+ Y T L +GW P+ + S W+
Sbjct: 540 YQGHY--TLQEKDGALYLGWMNQPLITSSAWR 629
>TC90344 weakly similar to PIR|H86282|H86282 protein F10B6.34 [imported] -
Arabidopsis thaliana, partial (28%)
Length = 1170
Score = 78.2 bits (191), Expect = 8e-15
Identities = 60/217 (27%), Positives = 101/217 (45%), Gaps = 2/217 (0%)
Frame = +1
Query: 200 EEKENVSLAESLLACAEKVGYQQYERARKLLSQIESL--SSKTGNPVKRVVHYFAEALCQ 257
EE + L L+ CA+ V A L+ ++ L + T + + +V YF +AL +
Sbjct: 511 EEDSAIKLVHMLMTCADSVQRGNLSLAGSLIEGMQGLLANMNTNSGIGKVAGYFIDALNR 690
Query: 258 RIDKETGRFSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLEN 317
RI NN+ SL++ + YE P+ + + FT QA+LE
Sbjct: 691 RI--------FGQNNVSHQVSLYENDVLYHHY-------YEACPYLKFAHFTANQAILEA 825
Query: 318 VNDAKKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGK 377
N +HVID + G QW L+QAL R P L++T I + D ++ + G
Sbjct: 826 FNGHDCVHVIDFNLMHGLQWPALIQALALRPGGP-PFLRLTGIGPPSPDDRDNL-REIGL 999
Query: 378 RLKDFAQSLNIPFSFDIVVVSDLLHIREELFKIDSEE 414
RL + A+S+N+ F+F V L ++ + ++ S++
Sbjct: 1000RLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSSKK 1110
>BI308453 weakly similar to PIR|T02736|T0 probable SCARECROW gene regulator
[imported] - Arabidopsis thaliana, partial (11%)
Length = 712
Score = 77.4 bits (189), Expect = 1e-14
Identities = 51/192 (26%), Positives = 90/192 (46%)
Frame = +3
Query: 202 KENVSLAESLLACAEKVGYQQYERARKLLSQIESLSSKTGNPVKRVVHYFAEALCQRIDK 261
+E V L L+ CA+ + A +LL+QI+ SS TG+ +R+ H+F AL R+
Sbjct: 168 EEVVDLRTLLMLCAQSISCNDISNANQLLNQIKKHSSPTGDGTQRLAHFFGNALEARL-- 341
Query: 262 ETGRFSVSSNNMQKMESLFDPQEVSKDLNPAMIALYEDLPFSQVSIFTCVQALLENVNDA 321
+ +L ++ + D+ A PF +++I A+L +
Sbjct: 342 -------AGTGSHVYRALSSKKKSAADMVKAYQVYSSACPFEKLAIMFSNDAILNVAKET 500
Query: 322 KKIHVIDLEIRKGCQWTILMQALQSRNECPLELLKITAIESGNSDTSKHIVEDTGKRLKD 381
+ +H+ID + G +W + L R+ P + L+IT I+ N S V +TG RL
Sbjct: 501 ESLHIIDFGVGYGFKWLGFIYRLSKRSGGPPK-LRITGIDLPN---SLERVNETGLRLSS 668
Query: 382 FAQSLNIPFSFD 393
+ + N+PF ++
Sbjct: 669 YCKRFNVPFEYN 704
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.319 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,836,406
Number of Sequences: 36976
Number of extensions: 244649
Number of successful extensions: 1330
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of query: 587
length of database: 9,014,727
effective HSP length: 101
effective length of query: 486
effective length of database: 5,280,151
effective search space: 2566153386
effective search space used: 2566153386
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Medicago: description of AC144539.4