TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144516.12 - phase: 0 
         (105 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC90561 similar to GP|17473784|gb|AAL38327.1 allyl alcohol dehyd...   216  1e-57
TC93151 homologue to GP|22136928|gb|AAM91808.1 unknown protein {...    27  1.6
TC91152 similar to GP|9759423|dbj|BAB09910.1 contains similarity...    25  3.6
TC77549 similar to GP|21592984|gb|AAM64933.1 photolyase/blue-lig...    25  4.7
BF639281 similar to PIR|G71415|G71 hypothetical protein - Arabid...    25  6.1
TC85470 homologue to GP|10334503|emb|CAC10213. GTP-binding prote...    24  8.0
TC80569 similar to GP|9757923|dbj|BAB08370.1 laccase (diphenol o...    24  8.0
BG587101 similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana...    24  8.0

>TC90561 similar to GP|17473784|gb|AAL38327.1 allyl alcohol
           dehydrogenase-like protein {Arabidopsis thaliana},
           partial (69%)
          Length = 490

 Score =  216 bits (550), Expect = 1e-57
 Identities = 105/105 (100%), Positives = 105/105 (100%)
 Frame = +3

Query: 1   MGLLWWRKGKNSQPEAKLSTTENAAKNGGASAVKPTTEAPGMNGAVEVKRPKNASVSVFE 60
           MGLLWWRKGKNSQPEAKLSTTENAAKNGGASAVKPTTEAPGMNGAVEVKRPKNASVSVFE
Sbjct: 36  MGLLWWRKGKNSQPEAKLSTTENAAKNGGASAVKPTTEAPGMNGAVEVKRPKNASVSVFE 215

Query: 61  FGSVAASNDKVTLAGYCPVSEDLEPCRWEILPAVESNAPQFRVVF 105
           FGSVAASNDKVTLAGYCPVSEDLEPCRWEILPAVESNAPQFRVVF
Sbjct: 216 FGSVAASNDKVTLAGYCPVSEDLEPCRWEILPAVESNAPQFRVVF 350


>TC93151 homologue to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
           thaliana}, partial (4%)
          Length = 657

 Score = 26.6 bits (57), Expect = 1.6
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -1

Query: 2   GLLWWRKGK 10
           GLLWWRKGK
Sbjct: 234 GLLWWRKGK 208


>TC91152 similar to GP|9759423|dbj|BAB09910.1 contains similarity to unknown
           protein~dbj|BAA90946.1~gene_id:K7J8.7 {Arabidopsis
           thaliana}, partial (44%)
          Length = 792

 Score = 25.4 bits (54), Expect = 3.6
 Identities = 11/31 (35%), Positives = 18/31 (57%)
 Frame = +1

Query: 6   WRKGKNSQPEAKLSTTENAAKNGGASAVKPT 36
           W++ + ++ +  L +TE A K G    VKPT
Sbjct: 283 WQEKREAKRQMYLMSTEKAVKLGERKDVKPT 375


>TC77549 similar to GP|21592984|gb|AAM64933.1 photolyase/blue-light receptor
           PHR2 {Arabidopsis thaliana}, partial (72%)
          Length = 1653

 Score = 25.0 bits (53), Expect = 4.7
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -2

Query: 2   GLLWWRKGKNSQPEAKLSTTENAAKNGGASAV 33
           G+L W KG+  + E +   +E     G    V
Sbjct: 173 GILGWNKGRREEREREREASEGGGSGGSGEGV 78


>BF639281 similar to PIR|G71415|G71 hypothetical protein - Arabidopsis
          thaliana, partial (0%)
          Length = 482

 Score = 24.6 bits (52), Expect = 6.1
 Identities = 7/13 (53%), Positives = 9/13 (68%)
 Frame = -1

Query: 82 DLEPCRWEILPAV 94
          DL PC W  +PA+
Sbjct: 86 DLSPCMWRFIPAI 48


>TC85470 homologue to GP|10334503|emb|CAC10213. GTP-binding protein {Cicer
           arietinum}, complete
          Length = 947

 Score = 24.3 bits (51), Expect = 8.0
 Identities = 11/24 (45%), Positives = 12/24 (49%)
 Frame = +1

Query: 69  DKVTLAGYCPVSEDLEPCRWEILP 92
           D V L GYC   E   P RW + P
Sbjct: 256 DSVLLLGYCWTREVWWPQRWILYP 327


>TC80569 similar to GP|9757923|dbj|BAB08370.1 laccase (diphenol oxidase)
           {Arabidopsis thaliana}, partial (46%)
          Length = 1117

 Score = 24.3 bits (51), Expect = 8.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 77  CPVSEDLEPCRW 88
           CP ++ L+PC+W
Sbjct: 587 CPTTKKLKPCKW 552


>BG587101 similar to GP|6691191|gb F7F22.15 {Arabidopsis thaliana}, partial
           (10%)
          Length = 624

 Score = 24.3 bits (51), Expect = 8.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -1

Query: 69  DKVTLAGYCPVSEDLEPCRWEILPAVESNA 98
           + V L   CP    LEP +W+ +P + S+A
Sbjct: 165 ETVLLTAKCPA*--LEPWQWKSMPGISSSA 82


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.311    0.127    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,021,668
Number of Sequences: 36976
Number of extensions: 27542
Number of successful extensions: 119
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of query: 105
length of database: 9,014,727
effective HSP length: 81
effective length of query: 24
effective length of database: 6,019,671
effective search space: 144472104
effective search space used: 144472104
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 50 (23.9 bits)