BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144515.9 + phase: 0
(207 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL366605 138 2e-33
AL375831 47 7e-06
TC76562 similar to PIR|T11622|T11622 extensin class 1 precursor ... 33 0.077
BQ144193 weakly similar to GP|14026007|dbj putative transporter ... 33 0.077
BQ150646 29 1.5
TC93915 similar to GP|10178125|dbj|BAB11537. gene_id:MOP10.2~unk... 29 1.5
TC76311 homologue to GP|3204132|emb|CAA07235.1 extensin {Cicer a... 29 1.5
TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 29 1.5
AL368332 weakly similar to GP|21322711|e pherophorin-dz1 protein... 28 1.9
AL367277 homologue to PIR|S14974|S149 extensin class I (clone uG... 28 3.2
TC83956 weakly similar to GP|15982931|gb|AAL09812.1 AT3g53700/F4... 28 3.2
AL372685 weakly similar to GP|4033606|dbj Extensin {Adiantum cap... 28 3.2
AW685919 homologue to PIR|S25298|S252 extensin (clone Tom J-10) ... 28 3.2
BQ141768 weakly similar to GP|11036868|gb| PxORF73 peptide {Plut... 28 3.2
TC76430 similar to PIR|T07623|T07623 extensin homolog HRGP2 - so... 28 3.2
TC77148 ENOD20 28 3.2
TC86164 weakly similar to GP|20514261|gb|AAM22959.1 tubulin fold... 28 3.2
TC76563 homologue to PIR|C29356|C29356 hydroxyproline-rich glyco... 28 3.2
BQ143793 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 28 3.2
TC78902 27 5.5
>AL366605
Length = 422
Score = 138 bits (347), Expect = 2e-33
Identities = 65/67 (97%), Positives = 67/67 (99%)
Frame = -3
Query: 1 MEDAAEWYTSLSKDDVHTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQR 60
MEDAAEWYTSLSK+D+HTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQR
Sbjct: 201 MEDAAEWYTSLSKNDIHTFDELAAAFKSHYGFNTRLKPNREFLRSLSQKKEESFREYAQR 22
Query: 61 WRGAAAR 67
WRGAAAR
Sbjct: 21 WRGAAAR 1
>AL375831
Length = 467
Score = 46.6 bits (109), Expect = 7e-06
Identities = 19/21 (90%), Positives = 21/21 (99%)
Frame = +3
Query: 1 MEDAAEWYTSLSKDDVHTFDE 21
MEDAAEWYTSLSK+D+HTFDE
Sbjct: 405 MEDAAEWYTSLSKNDIHTFDE 467
>TC76562 similar to PIR|T11622|T11622 extensin class 1 precursor - cowpea,
partial (48%)
Length = 1391
Score = 33.1 bits (74), Expect = 0.077
Identities = 27/114 (23%), Positives = 44/114 (37%), Gaps = 5/114 (4%)
Frame = +2
Query: 97 APNNFSEMVTMGTRLEEAVRDGIIVFEKAESSVNASKRYGNGHHKKKETEVGMVSAGAGQ 156
+P N + GT+L +D V KA+ ASK++ K K +
Sbjct: 566 SPFNIPTKLNQGTKLYLKSKDKYEVVLKAKPFAYASKKHFKECEKPKPSPT--------- 718
Query: 157 SMATVAPINAAQMPPSYPYVPYSQHP-----FFPPFYHQYPLPPGQNSLFPFYF 205
P PP P Y+ P + PP+ ++ P PP + + P+Y+
Sbjct: 719 ------PYYYKSPPPPSPVYKYNSPPPPVHYYSPPYTYKSPPPPVKAAPTPYYY 862
Score = 27.7 bits (60), Expect = 3.2
Identities = 14/52 (26%), Positives = 23/52 (43%), Gaps = 5/52 (9%)
Frame = +2
Query: 159 ATVAPINAAQMPPSYPYVPYSQHP-----FFPPFYHQYPLPPGQNSLFPFYF 205
A P PP P Y+ P + PP+ ++ P PP + + P+Y+
Sbjct: 839 AAPTPYYYKSPPPPAPVYKYNSPPPPVHYYSPPYTYKSPPPPVKAAPTPYYY 994
Score = 27.3 bits (59), Expect = 4.2
Identities = 14/52 (26%), Positives = 23/52 (43%), Gaps = 5/52 (9%)
Frame = +2
Query: 159 ATVAPINAAQMPPSYPYVPYSQHP-----FFPPFYHQYPLPPGQNSLFPFYF 205
A P PP P Y+ P + PP+ ++ P PP + + P+Y+
Sbjct: 971 AAPTPYYYKSPPPPAPVYKYNSPPPPVHYYSPPYTYKSPPPPVKVAPTPYYY 1126
Score = 26.9 bits (58), Expect = 5.5
Identities = 15/39 (38%), Positives = 20/39 (50%), Gaps = 3/39 (7%)
Frame = +2
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP P+Y+
Sbjct: 5 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPIPHTPYYY 118
Score = 26.2 bits (56), Expect = 9.4
Identities = 12/36 (33%), Positives = 17/36 (46%)
Frame = +2
Query: 170 PPSYPYVPYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP P P PP+Y++ P PP P+Y+
Sbjct: 128 PPPSPSPP-------PPYYYKSPPPPSPIPHTPYYY 214
Score = 26.2 bits (56), Expect = 9.4
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 163 PINAAQMPPSYPYVPYSQHPF-FPPFYHQYPLPPGQNSLFPFYF 205
P + + PP Y P P P+Y++ P PP + P+Y+
Sbjct: 35 PPSPSPPPPYYYKSPPPPSPIPHTPYYYKSPPPPSPSPPPPYYY 166
>BQ144193 weakly similar to GP|14026007|dbj putative transporter
{Mesorhizobium loti}, partial (4%)
Length = 1037
Score = 33.1 bits (74), Expect = 0.077
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +2
Query: 132 SKRYGNGHHKK-KETEVGMVSAGAGQSMATVAPINAAQMPPSYPYVPYSQHPFFPPFYHQ 190
+K+ NG K ET G + +S + +MPP YP HP PP H
Sbjct: 47 TKKRANGKQAKINETNAGKLKV---KSNTPAYLVGYKEMPPVYPRKSPKTHPRPPPNSHN 217
Query: 191 YPLPPGQ 197
P PP +
Sbjct: 218 RPEPPAK 238
>BQ150646
Length = 917
Score = 28.9 bits (63), Expect = 1.5
Identities = 18/48 (37%), Positives = 25/48 (51%), Gaps = 5/48 (10%)
Frame = +2
Query: 163 PINAAQMPPSYPYVPYSQHPFFPPFYH--QYPL---PPGQNSLFPFYF 205
PI AA PP++PY P F P++ +YP+ PP LF F +
Sbjct: 227 PIRAAVHPPTFPY------PIFIPYFTKLKYPILV*PPTLIDLFHFSY 352
>TC93915 similar to GP|10178125|dbj|BAB11537. gene_id:MOP10.2~unknown
protein {Arabidopsis thaliana}, partial (29%)
Length = 1001
Score = 28.9 bits (63), Expect = 1.5
Identities = 18/51 (35%), Positives = 24/51 (46%), Gaps = 5/51 (9%)
Frame = +3
Query: 157 SMATVAPINAAQMPPSYPYVPY-SQHPFFPPFYHQY----PLPPGQNSLFP 202
++ T P N PP+ P P+ QH PPFYH PLP ++ P
Sbjct: 201 NIPTTLPTNPIMFPPNPP--PHIRQHYRHPPFYHTIHPTLPLPSTMDTCHP 347
>TC76311 homologue to GP|3204132|emb|CAA07235.1 extensin {Cicer arietinum},
partial (77%)
Length = 973
Score = 28.9 bits (63), Expect = 1.5
Identities = 14/44 (31%), Positives = 23/44 (51%), Gaps = 1/44 (2%)
Frame = +2
Query: 163 PINAAQMPPSYPYVPYSQHPFFPP-FYHQYPLPPGQNSLFPFYF 205
P + + PP Y + P P PP +Y++ P PP + P+Y+
Sbjct: 2 PPSPSPPPPYYYHSPPPPSPSPPPPYYYKSPPPPSPSPPPPYYY 133
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP + P+Y+
Sbjct: 68 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPSPPPPYYY 181
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 20/39 (50%), Gaps = 3/39 (7%)
Frame = +2
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y+Q P PP P+++
Sbjct: 116 PPPYYYKSPPPPSPSPP-PPYYYQSPPPPSPTPHTPYHY 229
Score = 27.7 bits (60), Expect = 3.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +2
Query: 163 PINAAQMPPSYPYVPYSQHPFFPPFYHQYPLPPGQNSLFPFYFLK 207
P A PP Y YV PP YH PP + P Y K
Sbjct: 239 PPPTASPPPPYHYVSPPPPTSSPPPYHYTSPPPPSPAPAPTYIYK 373
>TC76326 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (32%)
Length = 777
Score = 28.9 bits (63), Expect = 1.5
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 163 PINAAQMPPSYPYVPYSQHPFFPPFYH-QYPLPPGQNSLFPFYF 205
P + + PP Y P P PP YH Q P PP S P+Y+
Sbjct: 112 PPSPSPPPPYYYKSPPPPSPSPPPPYHYQSPPPPSPISHPPYYY 243
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP + P+Y+
Sbjct: 34 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPSPPPPYYY 147
Score = 26.9 bits (58), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (49%)
Frame = +1
Query: 170 PPSYPYVPYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP P P PP+Y++ P PP + P+Y+
Sbjct: 13 PPPSPSPP-------PPYYYKSPPPPSPSPPPPYYY 99
Score = 26.6 bits (57), Expect = 7.2
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +1
Query: 170 PPSYPYV-PYSQHPF-FPPFYHQYPLPPGQNSLFPFYFL 206
PP Y Y P P PP+Y++ P PP + P++++
Sbjct: 178 PPPYHYQSPPPPSPISHPPYYYKSPPPPSPSPPPPYHYV 294
>AL368332 weakly similar to GP|21322711|e pherophorin-dz1 protein {Volvox
carteri f. nagariensis}, partial (10%)
Length = 478
Score = 28.5 bits (62), Expect = 1.9
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +1
Query: 162 APINAAQMPPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFP 202
AP +++ PP P P HPF PP H +P P + + P
Sbjct: 190 APSHSSPPPPPPPRKXPPPPPSHPFSPPPPHNHPPPSPHHPIAP 321
>AL367277 homologue to PIR|S14974|S149 extensin class I (clone uG-18) -
tomato (fragment), partial (46%)
Length = 254
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP + P+Y+
Sbjct: 40 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPSPPPPYYY 153
Score = 26.9 bits (58), Expect = 5.5
Identities = 12/36 (33%), Positives = 18/36 (49%)
Frame = +1
Query: 170 PPSYPYVPYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP P P PP+Y++ P PP + P+Y+
Sbjct: 19 PPPSPSPP-------PPYYYKSPPPPSPSPPPPYYY 105
>TC83956 weakly similar to GP|15982931|gb|AAL09812.1 AT3g53700/F4P12_400
{Arabidopsis thaliana}, partial (18%)
Length = 762
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/35 (42%), Positives = 18/35 (50%), Gaps = 4/35 (11%)
Frame = +3
Query: 176 VPYSQHPFFPPFYHQYPLPPGQ----NSLFPFYFL 206
+PYS H PF+H P PP Q +S P FL
Sbjct: 42 IPYSLHH---PFFHNTPPPPSQ*NPSSSTHPILFL 137
>AL372685 weakly similar to GP|4033606|dbj Extensin {Adiantum
capillus-veneris}, partial (49%)
Length = 407
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP + P+Y+
Sbjct: 290 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPSPPPPYYY 403
>AW685919 homologue to PIR|S25298|S252 extensin (clone Tom J-10) - tomato,
partial (23%)
Length = 663
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP + P+Y+
Sbjct: 97 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPSPPPPYYY 210
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP + P+Y+
Sbjct: 49 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPSPPPPYYY 162
>BQ141768 weakly similar to GP|11036868|gb| PxORF73 peptide {Plutella
xylostella granulovirus}, partial (29%)
Length = 958
Score = 27.7 bits (60), Expect = 3.2
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 8/50 (16%)
Frame = +2
Query: 163 PINAAQMPPSYPYVPYSQHPFFP--------PFYHQYPLPPGQNSLFPFY 204
PI A +PP+ P Q P FP P+ H P P Q S P Y
Sbjct: 116 PIFAFPLPPTPSSFPPPQSPLFPTPSLSTPFPYPHPKPSPIHQYSPLPPY 265
>TC76430 similar to PIR|T07623|T07623 extensin homolog HRGP2 - soybean
(fragment), partial (61%)
Length = 912
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 20/39 (50%), Gaps = 3/39 (7%)
Frame = +3
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y+Q P PP P+++
Sbjct: 3 PPPYYYKSPPPPSPSPP-PPYYYQSPPPPSPTPHTPYHY 116
Score = 27.7 bits (60), Expect = 3.2
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 163 PINAAQMPPSYPYVPYSQHPFFPPFYHQYPLPPGQNSLFPFYFLK 207
P A PP Y YV PP YH PP + P Y K
Sbjct: 126 PPPTASPPPPYHYVSPPPPTSSPPPYHYTSPPPPSPAPAPTYIYK 260
>TC77148 ENOD20
Length = 1108
Score = 27.7 bits (60), Expect = 3.2
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +3
Query: 139 HH----KKKETEVGMVSAGAGQSMATVAPINAAQMPPSYPYVPYSQHPFFPPFYHQYPLP 194
HH KK+ +G+ A + VAP+ ++ PP P P S P P P P
Sbjct: 339 HHFISGKKRHCRLGLKLA----VVVMVAPVLSSPPPPPSPPTPRSSTPIPHPPRRSLPSP 506
Query: 195 P 195
P
Sbjct: 507 P 509
>TC86164 weakly similar to GP|20514261|gb|AAM22959.1 tubulin folding cofactor
C {Arabidopsis thaliana}, partial (8%)
Length = 1369
Score = 27.7 bits (60), Expect = 3.2
Identities = 14/38 (36%), Positives = 15/38 (38%)
Frame = -1
Query: 162 APINAAQMPPSYPYVPYSQHPFFPPFYHQYPLPPGQNS 199
API P Y P H PP QYP PG +
Sbjct: 1000 APIRQRYCPSRP*YAPVPPHSRPPPSSRQYPSAPGSQT 887
>TC76563 homologue to PIR|C29356|C29356 hydroxyproline-rich glycoprotein
(clone Hyp2.13) - kidney bean (fragment), partial (34%)
Length = 507
Score = 27.7 bits (60), Expect = 3.2
Identities = 17/52 (32%), Positives = 25/52 (47%), Gaps = 3/52 (5%)
Frame = +2
Query: 157 SMATVAPINAAQMPPSY---PYVPYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
S A + I ++ PP Y P P P PP+Y++ P PP P+Y+
Sbjct: 98 SAAADSYIYSSPPPPYYYKSPPPPSPSPP--PPYYYKSPPPPSPIPKTPYYY 247
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP + P+Y+
Sbjct: 326 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPSPPPPYYY 439
Score = 27.7 bits (60), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP + P+Y+
Sbjct: 278 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPSPPPPYYY 391
Score = 26.9 bits (58), Expect = 5.5
Identities = 15/39 (38%), Positives = 20/39 (50%), Gaps = 3/39 (7%)
Frame = +2
Query: 170 PPSYPYV---PYSQHPFFPPFYHQYPLPPGQNSLFPFYF 205
PP Y Y P S P PP+Y++ P PP P+Y+
Sbjct: 374 PPPYYYKSPPPPSPSPP-PPYYYKSPPPPSPIPHTPYYY 487
>BQ143793 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (19%)
Length = 1100
Score = 27.7 bits (60), Expect = 3.2
Identities = 13/29 (44%), Positives = 17/29 (57%), Gaps = 3/29 (10%)
Frame = +3
Query: 170 PPSYPYVPYSQHPFFP---PFYHQYPLPP 195
PP P +P++ HP FP PF Y +PP
Sbjct: 66 PPPPPPIPHNIHPPFPSPPPFPLPYLIPP 152
>TC78902
Length = 686
Score = 26.9 bits (58), Expect = 5.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -2
Query: 154 AGQSMATVAPINAAQMPPSYPYVPYSQHPFFPP 186
+ ++ T +P ++ QM P + QHP FPP
Sbjct: 661 SNSTLLTXSPSHSNQMNPQHHKNDNFQHPIFPP 563
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,170,056
Number of Sequences: 36976
Number of extensions: 82313
Number of successful extensions: 917
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of query: 207
length of database: 9,014,727
effective HSP length: 92
effective length of query: 115
effective length of database: 5,612,935
effective search space: 645487525
effective search space used: 645487525
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Medicago: description of AC144515.9