BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144515.4 + phase: 0
(292 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC82819 homologue to PIR|T06753|T06753 zinc finger protein F15B8... 322 1e-88
TC78261 homologue to PIR|A86468|A86468 probable zinc finger prot... 102 2e-22
TC88547 similar to PIR|F96592|F96592 probable zinc finger protei... 93 1e-19
TC84551 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 90 9e-19
BG584080 similar to GP|4204303|gb| lcl|prt_seq No definition lin... 90 9e-19
TC78882 homologue to GP|8843731|dbj|BAA97279.1 zinc finger prote... 90 1e-18
TC87148 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No de... 89 2e-18
TC88531 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 87 6e-18
BM814721 homologue to GP|14597044|em unnamed protein product {Ar... 69 2e-12
TC83115 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No de... 68 4e-12
TC81124 homologue to GP|14597044|emb|CAC43563. unnamed protein p... 64 7e-11
TC90105 weakly similar to GP|10241636|emb|CAC09475. putative zin... 61 6e-10
TC84340 homologue to PIR|F96704|F96704 hypothetical protein T23K... 38 2e-07
TC89882 similar to PIR|A86468|A86468 probable zinc finger protei... 46 2e-05
TC88892 similar to GP|4519673|dbj|BAA75685.1 WREBP-2 {Nicotiana ... 42 2e-04
TC77176 homologue to GP|7228329|emb|CAB77055.1 putative TFIIIA (... 33 0.17
TC86679 similar to GP|17065046|gb|AAL32677.1 Unknown protein {Ar... 29 1.9
BI308837 similar to PIR|B84585|B84 hypothetical protein At2g2011... 29 1.9
TC88390 similar to GP|13272457|gb|AAK17167.1 unknown protein {Ar... 29 1.9
TC82080 similar to GP|9757854|dbj|BAB08488.1 contains similarity... 29 1.9
>TC82819 homologue to PIR|T06753|T06753 zinc finger protein F15B8.140 -
Arabidopsis thaliana, partial (50%)
Length = 1064
Score = 322 bits (824), Expect = 1e-88
Identities = 161/289 (55%), Positives = 199/289 (68%), Gaps = 16/289 (5%)
Frame = +1
Query: 16 PSNSSKSYLTSSSSS---------SSSTTQNETIQFFPILSANFSKDEEREVPQIEGFEF 66
P +++ S+ +S SS + S T++E + S +E+E+ I
Sbjct: 82 PYSNNISFASSPSSPPPREALPLLNLSPTKHEDLLESSFSSMEMMNMKEKEL-SISSNSL 258
Query: 67 KEEKEIVALHIGLPHDTKK-------YLDDEKKFFHFKEEEEEEKASKKTFQRFWIPTPA 119
++ VALH+GLP + Y DDEK E K S+ ++WIPTPA
Sbjct: 259 DDDAVTVALHLGLPSISSSDLASSNIYKDDEKVVTVDSSECPPNKISRG---QYWIPTPA 429
Query: 120 QILVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQ 179
QIL+GP QF+C +C KTFNRYNNMQMHMWGHGS++RKGP+SLRGTQP AMLRLPCYCC
Sbjct: 430 QILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAP 609
Query: 180 GCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWY 239
GCKNNI+HPRAKPLKDFRTLQTHYKRKHG KPFMCRKC K FAV+GDWRTHEKNCGKLWY
Sbjct: 610 GCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWY 789
Query: 240 CTCGSDFKHKRSLKDHIRSFGKGHRRLSSIDDRVFEEEKECVTGSEEDE 288
C CGSDFKHKRSLKDHI++FG GH+ ID+ + ++++ GSE ++
Sbjct: 790 CCCGSDFKHKRSLKDHIKAFGNGHKAY-GIDECLDQDDEH--GGSEIEQ 927
>TC78261 homologue to PIR|A86468|A86468 probable zinc finger protein
58191-56692 [imported] - Arabidopsis thaliana, partial
(29%)
Length = 975
Score = 102 bits (253), Expect = 2e-22
Identities = 57/150 (38%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Frame = +1
Query: 135 KTFNRYNNMQMHMWGHGSEFRKG-----PDSLRGTQPAAMLRLPCYCCVQGCKNNINHPR 189
K F R N++MHM GHG E++ P G++P + R C GCK N +H +
Sbjct: 4 KGFKRDANLRMHMRGHGDEYKTPAALAKPHKETGSEPKLIKRYSCP--YGGCKRNKDHKK 177
Query: 190 AKPLKDFRTLQTHYKRKHGTKPFMCRKC-GKTFAVKGDWRTHEKNCGK-LWYCTCGSDFK 247
+PLK ++ HYKR H K + C +C K F+V D +THEK+CGK W C+CG+ F
Sbjct: 178 FQPLKTILCVKNHYKRTHCDKSYTCSRCHTKKFSVMADLKTHEKHCGKDKWLCSCGTTFS 357
Query: 248 HKRSLKDHIRSFGKGHRRLSSIDDRVFEEE 277
K L HI F +GH ++D E
Sbjct: 358 RKDKLFGHIALF-QGHTPAIPLEDNKVSAE 444
>TC88547 similar to PIR|F96592|F96592 probable zinc finger protein
[imported] - Arabidopsis thaliana, partial (43%)
Length = 1765
Score = 92.8 bits (229), Expect = 1e-19
Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Frame = +2
Query: 120 QILVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQ 179
Q L+ +F C ICNK F R N+Q+H GH P L+ ++R Y C +
Sbjct: 683 QTLLATNRFICEICNKGFQRDQNLQLHKRGHNL-----PWKLKKRNVNEIIRKKVYVCPE 847
Query: 180 GCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCG-KLW 238
++H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K CG K +
Sbjct: 848 --PTCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTKEY 1021
Query: 239 YCTCGSDFKHKRSLKDH 255
C CG+ F + S H
Sbjct: 1022KCDCGTLFSRRDSFITH 1072
>TC84551 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (27%)
Length = 1133
Score = 90.1 bits (222), Expect = 9e-19
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Frame = +2
Query: 122 LVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGC 181
L+ +F C +CNK F R N+Q+H GH ++ S + +P R Y C +
Sbjct: 278 LMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNK--EP----RRKVYLCPE-- 433
Query: 182 KNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWY-C 240
++H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K CG Y C
Sbjct: 434 PTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRC 613
Query: 241 TCGSDFKHKRSLKDH 255
CG+ F + S H
Sbjct: 614 DCGTLFSRRDSFITH 658
>BG584080 similar to GP|4204303|gb| lcl|prt_seq No definition line found
{Arabidopsis thaliana}, partial (28%)
Length = 771
Score = 90.1 bits (222), Expect = 9e-19
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Frame = +3
Query: 122 LVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGC 181
L+ +F C ICNK F R N+Q+H GH P LR A + + C C
Sbjct: 414 LMATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLRQRTSAEVKKKVYVCPEPSC 578
Query: 182 KNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWY-C 240
++H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H+K CG Y C
Sbjct: 579 ---VHHNPSRALGDLTGIKKHFSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKC 749
Query: 241 TCGSDF 246
CG+ F
Sbjct: 750 DCGTIF 767
>TC78882 homologue to GP|8843731|dbj|BAA97279.1 zinc finger protein
{Arabidopsis thaliana}, partial (35%)
Length = 983
Score = 89.7 bits (221), Expect = 1e-18
Identities = 48/135 (35%), Positives = 69/135 (50%), Gaps = 1/135 (0%)
Frame = +3
Query: 122 LVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGC 181
L+ +F C ICNK F R N+Q+H GH P LR + + +R Y C +
Sbjct: 321 LLATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLR-QRSSKEIRKRVYVCPE-- 476
Query: 182 KNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWY-C 240
++H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K CG Y C
Sbjct: 477 PTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKVCGSREYKC 656
Query: 241 TCGSDFKHKRSLKDH 255
CG+ F + S H
Sbjct: 657 DCGTVFSRRDSFITH 701
>TC87148 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No definition
line found {Arabidopsis thaliana}, partial (29%)
Length = 845
Score = 89.0 bits (219), Expect = 2e-18
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +3
Query: 122 LVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGC 181
L+ +F C ICNK F R N+Q+H GH ++ + +A +R Y C +
Sbjct: 468 LMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ------RTSAEIRKRVYVCPE-- 623
Query: 182 KNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWY-C 240
+ ++H A+ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K CG Y C
Sbjct: 624 PSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKC 803
Query: 241 TCGSDFKHKRS 251
CG+ F + S
Sbjct: 804 DCGTIFSRRDS 836
>TC88531 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (27%)
Length = 898
Score = 87.4 bits (215), Expect = 6e-18
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Frame = +1
Query: 122 LVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGC 181
L+ +F C +C K F R N+Q+H GH ++ S + + L C C
Sbjct: 319 LMATNRFVCEVCQKGFQREQNLQLHRRGHNLPWKLKQKSNKEPKRKVYL-----CPEPTC 483
Query: 182 KNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWY-C 240
++H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K CG Y C
Sbjct: 484 ---VHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRC 654
Query: 241 TCGSDFKHKRSLKDH 255
CG+ F + S H
Sbjct: 655 DCGTLFSRRDSFITH 699
>BM814721 homologue to GP|14597044|em unnamed protein product {Arabidopsis
thaliana}, partial (17%)
Length = 771
Score = 68.9 bits (167), Expect = 2e-12
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 185 INHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCG-KLWYCTCG 243
++H ++ L D ++ HY RKHG K + C KC K +AV+ DW+ H K CG K + C CG
Sbjct: 31 VHHDPSRALGDLTGIKKHYFRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTKEYRCDCG 210
Query: 244 SDFKHKRSLKDH 255
+ F + S H
Sbjct: 211 TLFSRRDSFITH 246
>TC83115 homologue to GP|4204303|gb|AAD10684.1| lcl|prt_seq No definition
line found {Arabidopsis thaliana}, partial (25%)
Length = 519
Score = 68.2 bits (165), Expect = 4e-12
Identities = 33/109 (30%), Positives = 55/109 (50%)
Frame = +2
Query: 122 LVGPMQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGC 181
L+ +F C C K F R N+Q+H GH ++ + + ++ Y C +
Sbjct: 215 LMATNRFLCETCGKGFQRDQNLQLHRRGHNLPWKLKQRTNKE------IKKRVYVCPE-- 370
Query: 182 KNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTH 230
K ++H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H
Sbjct: 371 KTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAH 517
>TC81124 homologue to GP|14597044|emb|CAC43563. unnamed protein product
{Arabidopsis thaliana}, partial (21%)
Length = 1609
Score = 63.9 bits (154), Expect = 7e-11
Identities = 27/62 (43%), Positives = 35/62 (55%), Gaps = 1/62 (1%)
Frame = +1
Query: 195 DFRTLQTHYKRKHGTKPFMCRKCGKTFAVKGDWRTHEKNCGKLWY-CTCGSDFKHKRSLK 253
D ++ HY RKHG K + C KC K +AV+ DW+ H K CG Y C CG+ F + S
Sbjct: 4 DLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFI 183
Query: 254 DH 255
H
Sbjct: 184 TH 189
>TC90105 weakly similar to GP|10241636|emb|CAC09475. putative zinc finger
protein {Oryza sativa}, partial (21%)
Length = 653
Score = 60.8 bits (146), Expect = 6e-10
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +3
Query: 130 CSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCY--CCVQGCKNNINH 187
C IC K F R N++MHM HG++F K P++L +P M+R P C +GC N H
Sbjct: 420 CEICGKGFKRDANLRMHMRAHGNQF-KTPEAL--AKPLNMVRRPTQFSCPFEGCNRNKKH 590
Query: 188 PRAKPLKDFRTLQTHYKRKH 207
+ K LK ++TH+K H
Sbjct: 591 KKFKALKSVICVKTHFKXSH 650
>TC84340 homologue to PIR|F96704|F96704 hypothetical protein T23K23.2
[imported] - Arabidopsis thaliana, partial (33%)
Length = 692
Score = 38.1 bits (87), Expect(2) = 2e-07
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 127 QFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLRGTQPAAMLRLPCYCCVQGCKNNIN 186
++ C ICN+ F R N+QMH H K P L + + + C C ++
Sbjct: 346 RYVCEICNQGFQRDQNLQMHRRRH-----KVPWKLLKRETPVVRKRVFVCPEPTC---LH 501
Query: 187 HPRAKPLKDFRTLQTHYKRKH 207
H L D ++ H++RKH
Sbjct: 502 HDPCHALGDLVGIKKHFRRKH 564
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 11/26 (42%), Positives = 18/26 (68%)
Frame = +2
Query: 210 KPFMCRKCGKTFAVKGDWRTHEKNCG 235
K ++C +C K +AV+ D++ H K CG
Sbjct: 575 KQWVCERCSKGYAVQSDYKAHLKTCG 652
>TC89882 similar to PIR|A86468|A86468 probable zinc finger protein
58191-56692 [imported] - Arabidopsis thaliana, partial
(9%)
Length = 513
Score = 45.8 bits (107), Expect = 2e-05
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 213 MCRKCGKTFAVKGDWRTHEKNCGKL-WYCTCGSDFKHKRSLKDHIRSFGKGHRRLSSIDD 271
+CRK K +++ D ++H + CG+ W C+CGS F K L H+ F +GH ++D
Sbjct: 14 LCRK--KNYSMLSDLKSHMRQCGESKWKCSCGSTFSRKDKLFGHVALF-EGHMPAVVLED 184
Query: 272 RVFEEEKECVTGSEED 287
V + K+ V ED
Sbjct: 185 EV--KGKQVVAEENED 226
>TC88892 similar to GP|4519673|dbj|BAA75685.1 WREBP-2 {Nicotiana tabacum},
partial (90%)
Length = 1399
Score = 42.4 bits (98), Expect = 2e-04
Identities = 47/183 (25%), Positives = 66/183 (35%), Gaps = 9/183 (4%)
Frame = +3
Query: 97 KEEEEEEKASKKTFQRFWIPTPAQILVGPMQFACSI--CNKTFNRYNNMQMHMWGHGSEF 154
KE+E+E A P P + F CS C KTF ++ H HG
Sbjct: 270 KEKEKEPLA----------PEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGER- 416
Query: 155 RKGPDSLRGTQPAAMLRLPCYCCVQGCKNNINHPRAKPLKDFRTLQTHYKRKHGTKPFMC 214
C +GC K D L+ H+ G + F+C
Sbjct: 417 ------------------QFVCHYEGC--------GKKFLDSSKLKRHFLIHTGERDFVC 518
Query: 215 --RKCGKTFAVKGDWRTHEK-----NCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHRRLS 267
CGK F++ + R+H K N Y CG + H+ LK+HI S H + +
Sbjct: 519 PHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASH---HEKST 689
Query: 268 SID 270
ID
Sbjct: 690 PID 698
>TC77176 homologue to GP|7228329|emb|CAB77055.1 putative TFIIIA (or
kruppel)-like zinc finger protein {Medicago sativa},
partial (96%)
Length = 1005
Score = 32.7 bits (73), Expect = 0.17
Identities = 12/36 (33%), Positives = 18/36 (49%)
Frame = +2
Query: 115 IPTPAQILVGPMQFACSICNKTFNRYNNMQMHMWGH 150
+P PA + + CS+CNK F+ Y + H H
Sbjct: 326 VPVPAPLTTVKLSHKCSVCNKAFSSYQALGGHKASH 433
>TC86679 similar to GP|17065046|gb|AAL32677.1 Unknown protein {Arabidopsis
thaliana}, partial (48%)
Length = 1445
Score = 29.3 bits (64), Expect = 1.9
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = -1
Query: 13 WLKPSNSSKSYLTSSSSSS-----SSTTQNETIQFFPILSANFSKDEEREV 58
W S S+ +SSSSSS SS +++ +I FFP+ S+ S+ ERE+
Sbjct: 509 WSSSSCSTSPTWSSSSSSSGHNSSSSDSESSSITFFPL*SS--SETSEREI 363
>BI308837 similar to PIR|B84585|B84 hypothetical protein At2g20110 [imported]
- Arabidopsis thaliana, partial (28%)
Length = 667
Score = 29.3 bits (64), Expect = 1.9
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 126 MQFACSICNKTFNRYNNMQMHMWGHGSEFRKGPDSLR 162
+ F S CN + N +M W H F + PD L+
Sbjct: 650 LHFLQSFCNPCIYSFQNKEMLAWKHSQYFLRHPDFLQ 540
>TC88390 similar to GP|13272457|gb|AAK17167.1 unknown protein {Arabidopsis
thaliana}, partial (11%)
Length = 976
Score = 29.3 bits (64), Expect = 1.9
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -2
Query: 15 KPSNSSKSYLTSSSSSSSSTTQNETIQFFPILSANFSKDEEREVPQIEGFEFKEEKEIVA 74
+P S+K+ + SSSSSSSS+T + F I S++ E++ + E E V
Sbjct: 261 EPLGSAKTNVNSSSSSSSSSTSCLSSFSFSIFSSSILSFEKKSFSNFLETSLRGEVETVC 82
Query: 75 L 75
+
Sbjct: 81 I 79
>TC82080 similar to GP|9757854|dbj|BAB08488.1 contains similarity to
apoptosis antagonizing transcription
factor~gene_id:MFB13.10, partial (37%)
Length = 908
Score = 29.3 bits (64), Expect = 1.9
Identities = 16/35 (45%), Positives = 24/35 (67%)
Frame = -3
Query: 17 SNSSKSYLTSSSSSSSSTTQNETIQFFPILSANFS 51
S+SS S L SSSSSSSS+T ++ +S+++S
Sbjct: 180 SSSSSSSLPSSSSSSSSSTSLSSLTSLKDISSSYS 76
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,874,017
Number of Sequences: 36976
Number of extensions: 209389
Number of successful extensions: 2499
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2212
length of query: 292
length of database: 9,014,727
effective HSP length: 95
effective length of query: 197
effective length of database: 5,502,007
effective search space: 1083895379
effective search space used: 1083895379
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Medicago: description of AC144515.4