TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144513.4 - phase: 0 /pseudo
         (1015 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC76321 homologue to GP|16033631|gb|AAL13304.1 leucine zipper-co...    41  0.002
BG647437 similar to PIR|G84555|G84 hypothetical protein At2g1773...    31  2.7
TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana taba...    30  3.6
TC91159 weakly similar to GP|20197705|gb|AAD17402.2 putative RIN...    30  3.6
TC93758 weakly similar to GP|22002164|gb|AAM88648.1 putative rec...    30  4.7
TC90423 similar to GP|20466586|gb|AAM20610.1 unknown protein {Ar...    30  4.7
TC91210 similar to GP|2291080|gb|AAC96017.1| defective gibberell...    30  6.1
TC81779                                                                30  6.1
TC92255 weakly similar to GP|4049888|gb|AAC97848.1| ORF MSV023 A...    29  8.0

>TC76321 homologue to GP|16033631|gb|AAL13304.1 leucine zipper-containing
           protein {Euphorbia esula}, partial (92%)
          Length = 1468

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 25/79 (31%), Positives = 45/79 (56%)
 Frame = +3

Query: 236 KTIIKWLKLVGVKTMVTALRSLK*LLVNWIAEVNKNMGTFLRM*KILKRPSLILKIVFLL 295
           K   + L+L+ +K ++   RSL+ LL+N +A +++++ +FLR   +L        +VF  
Sbjct: 321 KLCFRNLRLITIKLILLGTRSLRKLLINLMALLDRSLLSFLRGLVLLN------SLVFFS 482

Query: 296 KKSLDGSRRKKIFWMVCWS 314
            KSL+G  RK   W + +S
Sbjct: 483 TKSLEGDLRKPTLWWLRFS 539


>BG647437 similar to PIR|G84555|G84 hypothetical protein At2g17730 [imported]
           - Arabidopsis thaliana, partial (48%)
          Length = 693

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 31/101 (30%), Positives = 48/101 (46%), Gaps = 1/101 (0%)
 Frame = +3

Query: 647 FMVSKLLLMPPALLTFFMQMAIFSFVRLTLMRPLLYPTFFLNTK-LFLARKLILISQIWS 705
           F++  LLL P +L   F           TL   L+    F++ + +FL   L      W 
Sbjct: 3   FIII*LLLKPKSLYHQFQ-------TERTLPILLVLVVLFVSIRAIFLCENL----DKWI 149

Query: 706 LAQIPVLVLKIYSELISLSTSRIIFLSIWGFLLSLEDLKLK 746
           L QI VL++ + S L+ +S +++  L    FLLSLE   L+
Sbjct: 150 LYQIHVLLVLLCSVLLGISLTKLNNLVPSQFLLSLETFSLR 272


>TC81816 similar to GP|8096269|dbj|BAA95789.1 KED {Nicotiana tabacum},
           partial (13%)
          Length = 663

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
 Frame = -2

Query: 645 VTFMVSKLLLMPPALLTFFMQMAIFSFVR--LTLMRPLLYPTFF----LNTKLFLARKLI 698
           + F++S+ LL+    L FF  + +F+F R    +  P  Y T F    L   LFL   L+
Sbjct: 644 LVFILSRFLLL--LFLVFFFLLLLFTFFRGFFYINIPYRYFTLFFLILLLLFLFLILILL 471

Query: 699 LISQIWSLAQIPVLVLKIYSELISLSTSRIIFLSIWGFLLSLEDLKLKILSLLWI 753
            ++ I  L  I V +L ++  L+ L       L    F L L  L L +L LL+I
Sbjct: 470 FLTSI--LTFIIVFILVLFLLLVFLRFLLFTILVFVFFSLLLLFLFLLLLILLFI 312


>TC91159 weakly similar to GP|20197705|gb|AAD17402.2 putative RING-H2 zinc
           finger protein {Arabidopsis thaliana}, partial (21%)
          Length = 695

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +2

Query: 18  IKNLSHVFSMVLSLILLLLIVLLVIAIDQVVL 49
           I  + HVFS+ L  IL++LIV L++++D + L
Sbjct: 464 ISIIQHVFSLGLKHILIVLIVELLLSLDDIYL 559


>TC93758 weakly similar to GP|22002164|gb|AAM88648.1 putative receptor-like
           protein kinase {Oryza sativa (japonica cultivar-group)},
           partial (3%)
          Length = 814

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 26/89 (29%), Positives = 42/89 (46%), Gaps = 7/89 (7%)
 Frame = -2

Query: 674 LTLMRP--LLYPTFFLNTKLFLARKL-----ILISQIWSLAQIPVLVLKIYSELISLSTS 726
           +T M+P  ++Y   + NT  ++AR +      LI+ +WS            + LI + T 
Sbjct: 324 VTEMKPK*MIYVLLYRNTPTYVARTVNTLFASLINPVWS------------NILI*IWTI 181

Query: 727 RIIFLSIWGFLLSLEDLKLKILSLLWIEF 755
           R I  S W       ++K  ILS+LWI +
Sbjct: 180 RCIICSAWNM-----NVKGAILSVLWISY 109


>TC90423 similar to GP|20466586|gb|AAM20610.1 unknown protein {Arabidopsis
           thaliana}, partial (14%)
          Length = 1114

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 643 IRVTFMVSKLLLMPPALLTFFMQMAIFSFVRLTLMRPLLYP 683
           +R   ++   LL+   +L  FM+M IFSF R   MR L  P
Sbjct: 809 VREGLLIFNTLLLQIFMLLHFMEMVIFSFTREN*MRNLCEP 931


>TC91210 similar to GP|2291080|gb|AAC96017.1| defective gibberellin
           3B-hydroxylase {Pisum sativum}, partial (44%)
          Length = 659

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 17/40 (42%), Positives = 24/40 (59%)
 Frame = +2

Query: 353 TL*LTHMKKFGEITITFMRSLLPILRRCLLVLDLLFPLML 392
           TL   H K F  +T+     + P+LRR LLV  +LFPL++
Sbjct: 170 TLISIHYKNFLNLTLGTTLMITPLLRRVLLV--VLFPLLI 283


>TC81779 
          Length = 478

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +2

Query: 101 ILLICYIILENMIVGLFLGILT*YYIVLKS*EEILLFLY 139
           I LIC ++LEN  V    G++ *YYIVL  *  I +F +
Sbjct: 362 ISLICLLVLENGDV--VFGVVK*YYIVLAI*RYISIFQF 472


>TC92255 weakly similar to GP|4049888|gb|AAC97848.1| ORF MSV023 ALI motif
           gene family protein {Melanoplus sanguinipes
           entomopoxvirus}, partial (8%)
          Length = 886

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -3

Query: 701 SQIWSLAQIPVLVLKIYSELISLSTSRIIFLSIWGFLLSL 740
           S  +S+    +L+LK  S  + LSTS +   SIW F+ SL
Sbjct: 179 SSSFSVFNASILLLKWASSFLFLSTSCLWLASIWNFINSL 60


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.368    0.167    0.619 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,509,345
Number of Sequences: 36976
Number of extensions: 608841
Number of successful extensions: 10600
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2673
Number of HSP's successfully gapped in prelim test: 596
Number of HSP's that attempted gapping in prelim test: 7524
Number of HSP's gapped (non-prelim): 3945
length of query: 1015
length of database: 9,014,727
effective HSP length: 106
effective length of query: 909
effective length of database: 5,095,271
effective search space: 4631601339
effective search space used: 4631601339
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 63 (28.9 bits)