BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144513.3 - phase: 0 /pseudo
(1115 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC86644 similar to GP|7939576|dbj|BAA95777.1 gene_id:K20I9.6~unk... 847 0.0
TC92332 similar to GP|18377648|gb|AAL66974.1 unknown protein {Ar... 700 0.0
TC86643 similar to GP|5922612|dbj|BAA84613.1 EST AU078118(E3904)... 420 e-140
TC88077 similar to GP|15028127|gb|AAK76687.1 unknown protein {Ar... 421 e-118
TC86503 similar to GP|15028127|gb|AAK76687.1 unknown protein {Ar... 378 e-105
TC82225 homologue to GP|15028127|gb|AAK76687.1 unknown protein {... 374 e-103
BF650569 similar to GP|14532678|gb putative WD-repeat protein {A... 319 3e-87
TC86504 similar to GP|15028127|gb|AAK76687.1 unknown protein {Ar... 264 2e-85
BG583562 similar to PIR|G96836|G9 unknown protein T21F11.18 [imp... 298 6e-81
BG450245 similar to GP|5922612|dbj EST AU078118(E3904) correspon... 285 5e-77
TC81251 homologue to GP|5922612|dbj|BAA84613.1 EST AU078118(E390... 233 4e-61
TC88078 homologue to GP|15028127|gb|AAK76687.1 unknown protein {... 172 7e-44
CA990936 similar to GP|18377648|gb unknown protein {Arabidopsis ... 124 3e-28
TC91738 similar to GP|15028127|gb|AAK76687.1 unknown protein {Ar... 109 6e-26
TC77774 similar to GP|15028127|gb|AAK76687.1 unknown protein {Ar... 107 4e-25
TC85659 SP|O24076|GBLP_MEDSA Guanine nucleotide-binding protein ... 50 4e-06
TC87605 homologue to PIR|G96563|G96563 probable coatomer complex... 45 2e-04
TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {... 43 6e-04
TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coa... 42 0.001
TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclea... 41 0.002
>TC86644 similar to GP|7939576|dbj|BAA95777.1 gene_id:K20I9.6~unknown protein
{Arabidopsis thaliana}, partial (37%)
Length = 1867
Score = 847 bits (2188), Expect(2) = 0.0
Identities = 427/427 (100%), Positives = 427/427 (100%)
Frame = +3
Query: 689 AVKWKGAPLQGLLKFLMELILRVEMRRNLGLWKM*WIELNHGSSSKLWILPTVD*LPCLT 748
AVKWKGAPLQGLLKFLMELILRVEMRRNLGLWKM*WIELNHGSSSKLWILPTVD*LPCLT
Sbjct: 375 AVKWKGAPLQGLLKFLMELILRVEMRRNLGLWKM*WIELNHGSSSKLWILPTVD*LPCLT 554
Query: 749 AQILRARLFDFYIQILVLVFWHLGQMVFRSCGSGLGMIRILVGRRLLVLFRNIGNPTVVF 808
AQILRARLFDFYIQILVLVFWHLGQMVFRSCGSGLGMIRILVGRRLLVLFRNIGNPTVVF
Sbjct: 555 AQILRARLFDFYIQILVLVFWHLGQMVFRSCGSGLGMIRILVGRRLLVLFRNIGNPTVVF 734
Query: 809 L*PMMFLVSTLKKQFLALHSQRMIHMLCLHVVERFLYLT**HSR**QHSWHHLPPLRFWL 868
L*PMMFLVSTLKKQFLALHSQRMIHMLCLHVVERFLYLT**HSR**QHSWHHLPPLRFWL
Sbjct: 735 L*PMMFLVSTLKKQFLALHSQRMIHMLCLHVVERFLYLT**HSR**QHSWHHLPPLRFWL 914
Query: 869 STLKITTS*PLGWRIQLFIFIMLEWMR*NQN*RVTKSEFLV*LFQPILASWFHLVLMLIF 928
STLKITTS*PLGWRIQLFIFIMLEWMR*NQN*RVTKSEFLV*LFQPILASWFHLVLMLIF
Sbjct: 915 STLKITTS*PLGWRIQLFIFIMLEWMR*NQN*RVTKSEFLV*LFQPILASWFHLVLMLIF 1094
Query: 929 ACGALIHGRKENQFLYNYLWGRLLLVKLVYSSIQTNSDYWYPMRLSWQYMMPQRWNALDS 988
ACGALIHGRKENQFLYNYLWGRLLLVKLVYSSIQTNSDYWYPMRLSWQYMMPQRWNALDS
Sbjct: 1095 ACGALIHGRKENQFLYNYLWGRLLLVKLVYSSIQTNSDYWYPMRLSWQYMMPQRWNALDS 1274
Query: 989 GFHKMFCLLLYHMQLILATVS*FLLHFAMATLGFLMLTA*D*DVALHHQHTSQQRL*AEA 1048
GFHKMFCLLLYHMQLILATVS*FLLHFAMATLGFLMLTA*D*DVALHHQHTSQQRL*AEA
Sbjct: 1275 GFHKMFCLLLYHMQLILATVS*FLLHFAMATLGFLMLTA*D*DVALHHQHTSQQRL*AEA 1454
Query: 1049 KLCILLLWQLIHSSPTNLPLD*LMGQ*K**SPLNQRESGDPVHLWIME**MVGQHHLQAT 1108
KLCILLLWQLIHSSPTNLPLD*LMGQ*K**SPLNQRESGDPVHLWIME**MVGQHHLQAT
Sbjct: 1455 KLCILLLWQLIHSSPTNLPLD*LMGQ*K**SPLNQRESGDPVHLWIME**MVGQHHLQAT 1634
Query: 1109 THPIRVH 1115
THPIRVH
Sbjct: 1635 THPIRVH 1655
Score = 216 bits (549), Expect(2) = 0.0
Identities = 109/112 (97%), Positives = 110/112 (97%)
Frame = +2
Query: 577 AIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPH 636
AIKR+ GFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPH
Sbjct: 2 AIKRSTIGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPH 181
Query: 637 LRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIESAANK 688
LRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIESAANK
Sbjct: 182 LRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAFEALRSPIESAANK 337
>TC92332 similar to GP|18377648|gb|AAL66974.1 unknown protein {Arabidopsis
thaliana}, partial (34%)
Length = 1164
Score = 700 bits (1807), Expect = 0.0
Identities = 334/389 (85%), Positives = 362/389 (92%), Gaps = 1/389 (0%)
Frame = +2
Query: 196 KTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPFPPAAATANANALAGW 255
KTL +DH+C+PSNGPLAPTPVNLP++AVAKP AYTSLG AHGPFPP ATANANALAGW
Sbjct: 2 KTLXLDHTCSPSNGPLAPTPVNLPISAVAKPVAYTSLG--AHGPFPPNVATANANALAGW 175
Query: 256 MANASVSSSVQAAVVTASTIPVPHNQVSILKRPITPSTTPGMVEYQSADHEQLMKRLRPA 315
MANAS SSSVQAAVVT+ST+PVP NQVSILKRP TP TPG+V+YQ+ DHEQLMKRLRP
Sbjct: 176 MANASASSSVQAAVVTSSTMPVPQNQVSILKRPRTPPATPGIVDYQNTDHEQLMKRLRPG 355
Query: 316 PSVEEVSYPSARQASWSLDDLPRTVAMSLHQGSSVTSMDFHPSHQTLLLVGSNNGEISLW 375
SVEEVSYP ARQASWSLDDLPRTVAM+LHQGSSVTS+DFHPSH TLLLVGS+NGEI+LW
Sbjct: 356 HSVEEVSYPVARQASWSLDDLPRTVAMTLHQGSSVTSLDFHPSHHTLLLVGSSNGEITLW 535
Query: 376 ELGMRERLVSKPFKIWDISACSLPFQAAVVKDTP-SVSRVTWSLDGSFVGVAFTKHLIHI 434
EL +RERLVSKPFKIWD+SACSLPFQAA VKD P SVSRVTWS DG+FVGVAFTKHLIH+
Sbjct: 536 ELSLRERLVSKPFKIWDVSACSLPFQAAAVKDAPISVSRVTWSPDGNFVGVAFTKHLIHL 715
Query: 435 YAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKLIKVWDLTGRRLFNFEG 494
YAY GSNELAQR+E+DAH+GGVNDL+FA PNKQLC+VTCGDDKLIKVWD GRRLF FEG
Sbjct: 716 YAYTGSNELAQRIEVDAHVGGVNDLSFALPNKQLCIVTCGDDKLIKVWDANGRRLFTFEG 895
Query: 495 HEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTR 554
H+APVYSICPHHKENIQFIFSTA+DGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADG+R
Sbjct: 896 HDAPVYSICPHHKENIQFIFSTAIDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGSR 1075
Query: 555 LFSCGTSKDGDSFLVEWNESEGAIKRTYN 583
LFSCGTSKDG+SFL EW+ESEGAIKRTYN
Sbjct: 1076LFSCGTSKDGESFLGEWDESEGAIKRTYN 1162
>TC86643 similar to GP|5922612|dbj|BAA84613.1 EST AU078118(E3904) corresponds
to a region of the predicted gene.~similar to Arabidopsis
thaliana, partial (39%)
Length = 1705
Score = 420 bits (1080), Expect(3) = e-140
Identities = 245/369 (66%), Positives = 271/369 (73%), Gaps = 2/369 (0%)
Frame = +2
Query: 747 LTAQILRARLFDFYIQILVLVFWHLGQMVFRSCGSGLGMIRILVGRRLLVLFRNIGNPTV 806
LT Q L ARL+ FYIQIL+LVFW L QMV RS G+GL M +I +GR+L VLF N+GNPTV
Sbjct: 323 LTPQTLSARLYGFYIQILLLVFWPLVQMVSRSFGNGLAMNKIPLGRQLPVLFHNVGNPTV 502
Query: 807 VFL*PMMFLVSTLKKQFLALHSQRMIHMLCLHVVERFLYLT**HSR**QHSWHHLPPLRF 866
VFL* + STLKKQ LALHSQ+M MLCL VVE+F YLT**HSR**QHS HHL L
Sbjct: 503 VFL*LTISRASTLKKQSLALHSQKMTLMLCLPVVEKFHYLT**HSR**QHSCHHLLHLLS 682
Query: 867 WLSTLKITTS*PLGWRIQLFIFIMLEWMR*NQN*RVTKSEFLV*LFQPILASWFHLVLML 926
LS L+ITT PLGWRIQ F IM EWMR*NQN*RVT+ E LV* FQPIL SWFH LML
Sbjct: 683 *LSILRITTLYPLGWRIQPFTSIMSEWMR*NQN*RVTRDELLV*PFQPILTSWFHPALML 862
Query: 927 IFACGALIHGRKENQFLYNYLWGRLLLVKLVYSSIQTNSDYWYPMRLSWQYMMPQRWNAL 986
CGALIHGRKENQF +NYL LV V+SSI T YW M+L+WQYMM RWNA
Sbjct: 863 KCVCGALIHGRKENQFQFNYLRESHQLVIHVFSSILTKFAYW*SMKLNWQYMMAPRWNAF 1042
Query: 987 DSGFHKMFCLLLYHMQLILATVS*FLLHFAMATLGFLMLTA*D*DVALHHQHTSQQRL*A 1046
SGF KM CLL YHMQ I ATVS*++LHF M TLGF ML A* *DV LHHQ+ +Q L*
Sbjct: 1043 GSGFPKMLCLLPYHMQHIPATVS*YMLHFVMQTLGFSMLIA*G*DVVLHHQYACRQPL*V 1222
Query: 1047 EAKLCILLLWQLIHSSPTNLPLD*LMGQ*K**SPLNQRESGDPVHLWIME**MV-GQHHL 1105
EAKLCILL +LIH + TNL L *+MG K**+P+N R SGD +HLW E *MV HHL
Sbjct: 1223 EAKLCILL*LRLIH*NLTNLLLG*VMGLSK**NPVNLRVSGDRLHLWTTES*MVRPHHHL 1402
Query: 1106 Q-ATTHPIR 1113
Q ATT IR
Sbjct: 1403 QLATTQRIR 1429
Score = 64.3 bits (155), Expect(3) = e-140
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 652 DNGFKILANAGGLRSLRTVETPAFEALRSPIESAANK 688
DNGFKI+ANA GLRSLRT+ETPAFEALRSPIES + K
Sbjct: 3 DNGFKIMANATGLRSLRTIETPAFEALRSPIESTSIK 113
Score = 55.1 bits (131), Expect(3) = e-140
Identities = 34/57 (59%), Positives = 36/57 (62%)
Frame = +1
Query: 690 VKWKGAPLQGLLKFLMELILRVEMRRNLGLWKM*WIELNHGSSSKLWILPTVD*LPC 746
VKWK A L G L FLMELI VE+ RN WKM IELNHG+ K WIL V PC
Sbjct: 154 VKWKEALLSGRLLFLMELIP*VEV*RNQE-WKMQRIELNHGN*LKFWILSNVAQ*PC 321
>TC88077 similar to GP|15028127|gb|AAK76687.1 unknown protein {Arabidopsis
thaliana}, partial (27%)
Length = 1130
Score = 421 bits (1082), Expect = e-118
Identities = 222/323 (68%), Positives = 251/323 (76%), Gaps = 3/323 (0%)
Frame = +1
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFLEEEKFKE+VHKLE+ESGF+FNMKYFEE+V G W+EVEKYLSGF
Sbjct: 175 MSSLSRELVFLILQFLEEEKFKEAVHKLEQESGFYFNMKYFEEEVHNGNWDEVEKYLSGF 354
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRKQKYLEALD+ D+ K VEILV DLKVFSTFNEEL+KEITQLLT
Sbjct: 355 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKGVEILVKDLKVFSTFNEELFKEITQLLT 534
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLN 180
L NFRENEQLSKYGDTK+AR IML+ELKKLIEANPLFRDKL FP LK+SRLRTLINQSLN
Sbjct: 535 LENFRENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLN 714
Query: 181 WQHQLCKNPRPNPDIKTLFIDHSCTPSNGPLAPTPVNLP-VAAVAKPAAYTSLGVGAHGP 239
WQHQLCKNPRPNPDIKTLF+DHSC NG AP+P N+P + ++ K + L GAHGP
Sbjct: 715 WQHQLCKNPRPNPDIKTLFVDHSCGQPNGARAPSPANMPLLGSLPKVGGFPPL--GAHGP 888
Query: 240 FPPAAATANANALAGWMANAS--VSSSVQAAVVTASTIPVPHNQVSILKRPITPSTTPGM 297
F P A LAGWM+N + SV + + P + + LK P TP T P
Sbjct: 889 FQPTPAPV-PMPLAGWMSNPTPVAHPSVSGGGAISLGVGGP-SMPAALKHPRTPPTNPS- 1059
Query: 298 VEYQSADHEQLMKRLRPAPSVEE 320
V+Y S D + + KR RP +E
Sbjct: 1060VDYPSGDSDHISKRTRPIGMSDE 1128
>TC86503 similar to GP|15028127|gb|AAK76687.1 unknown protein {Arabidopsis
thaliana}, partial (54%)
Length = 1915
Score = 378 bits (970), Expect = e-105
Identities = 175/238 (73%), Positives = 207/238 (86%), Gaps = 2/238 (0%)
Frame = +3
Query: 445 QRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKLIKVWD-LTGRRLFNFEGHEAPVYSIC 503
Q +EIDAH+ GVNDLAF+HPNKQLCV+TCGDDK IKVWD ++G + + FEGHEAPVYS+C
Sbjct: 6 QHLEIDAHVCGVNDLAFSHPNKQLCVITCGDDKTIKVWDAVSGAKQYTFEGHEAPVYSVC 185
Query: 504 PHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKD 563
PH+KENIQFIFSTA+DGKIKAWLYDN+GSRVDYDAPG WCTTM YSADGTRLFSCGTSKD
Sbjct: 186 PHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKD 365
Query: 564 GDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLT 623
G+S +VEWNESEGA+KRTY GFRK+S GVVQFDTT+NRFLAAG+D IKFWDMDN+ LT
Sbjct: 366 GESSIVEWNESEGAVKRTYQGFRKRSMGVVQFDTTKNRFLAAGDDFSIKFWDMDNIQLLT 545
Query: 624 STEAEGGLQGLPHLRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPA-FEALRS 680
+ +A+GGL P +RFNK+G LLAV+ DNG KI+ANA G+R LRT+E + ++A+ S
Sbjct: 546 TVDADGGLPASPRIRFNKDGTLLAVSANDNGIKIVANADGIRLLRTLENNSMYDAVES 719
Score = 87.4 bits (215), Expect = 3e-17
Identities = 94/268 (35%), Positives = 119/268 (44%), Gaps = 2/268 (0%)
Frame = +2
Query: 760 YIQILVLVFWHLGQMVFRSCGSGLGMIRILVGRRLLVLFRNIGNPTVVFL*PMMFLVSTL 819
+IQI ++F H QM F G+G M + R +L + GN * M L++ L
Sbjct: 986 FIQIQEMLF*H*HQMPFTFSGNGREMNVTHLARPMLPCQLSCGNHRAAS**LMTSLIAIL 1165
Query: 820 KKQFLALHSQRMIHMLCLHVVERFLYLT**HSR**QHSWHHLPPLRFWLSTLKITTS*PL 879
K F AL +MI M CLH R+ T** R *Q S L F LS L+IT
Sbjct: 1166 KILFHALLCPKMIRM*CLHQEGRYPCST**LLRR*QLSCLRHLRLLFLLSILRITILLL* 1345
Query: 880 GWRIQLFIFIMLEWMR*NQN*RVTKSEFLV*LFQPILASWFHLVLMLIFACGALIHGRKE 939
W I F +IM MR N +V + E V L FHL ML F CG L G+
Sbjct: 1346 AWMIPPFRYIMSVLMRLKVNSKVIQKE*PVLLSLMY*MFLFHLERMLRFVCGTLTDGKNR 1525
Query: 940 NQFLYNYLWGRLLLVKL--VYSSIQTNSDYWYPMRLSWQYMMPQRWNALDSGFHKMFCLL 997
+YL G L VYS + W +LS ++ N SG H + L
Sbjct: 1526 RLDSCSYLLGGLHQHSQIHVYSFTRIRYSSWSYTKLSSPFLKQLN*NV*SSGPHGIL-LH 1702
Query: 998 LYHMQLILATVS*FLLHFAMATLGFLML 1025
Y MQL AT S*++ F M +LML
Sbjct: 1703 QYRMQLFHATAS*YMQAF*MLQSVYLML 1786
>TC82225 homologue to GP|15028127|gb|AAK76687.1 unknown protein {Arabidopsis
thaliana}, partial (22%)
Length = 826
Score = 374 bits (960), Expect(2) = e-103
Identities = 193/264 (73%), Positives = 214/264 (80%)
Frame = +1
Query: 12 ILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGFTKVDDNRYSMK 71
+ F EKFKE+VHKLE+ESGFFFNMKYFE++V G W+EVEKYLSGFTKVDDNRYSMK
Sbjct: 31 LASFWMSEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMK 210
Query: 72 IFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLTLTNFRENEQLS 131
IFFEIRKQKYLEALD+ D+ KAVEILV DLKVF+TFNEEL+KEITQLLTL NFRENEQLS
Sbjct: 211 IFFEIRKQKYLEALDKHDRSKAVEILVKDLKVFATFNEELFKEITQLLTLENFRENEQLS 390
Query: 132 KYGDTKTARGIMLLELKKLIEANPLFRDKLVFPTLKSSRLRTLINQSLNWQHQLCKNPRP 191
KYGDTK+AR IML+ELKKLIEANPLFRDKL FP LK+SRLRTLINQSLNWQHQLCKNPRP
Sbjct: 391 KYGDTKSARAIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRP 570
Query: 192 NPDIKTLFIDHSCTPSNGPLAPTPVNLPVAAVAKPAAYTSLGVGAHGPFPPAAATANANA 251
NPDIKTLF+DHSC NG AP+P N P+ + P A +GAHGPF P A A
Sbjct: 571 NPDIKTLFVDHSCGQPNGARAPSPANSPLLG-SLPKAGGFPPLGAHGPFQPNPA-AVPTQ 744
Query: 252 LAGWMANASVSSSVQAAVVTASTI 275
LAGWM+N ++ AAV A I
Sbjct: 745 LAGWMSNP--TTVAHAAVSGAGAI 810
Score = 20.4 bits (41), Expect(2) = e-103
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 6 RELVFLILQ 14
RELVFLILQ
Sbjct: 11 RELVFLILQ 37
>BF650569 similar to GP|14532678|gb putative WD-repeat protein {Arabidopsis
thaliana}, partial (25%)
Length = 667
Score = 319 bits (818), Expect = 3e-87
Identities = 143/197 (72%), Positives = 171/197 (86%), Gaps = 1/197 (0%)
Frame = +2
Query: 422 FVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKLIKV 481
F + ++KH++HIY+Y+G ++L +EI+AH G VNDLAF++PNKQLCVVTCG+D++IKV
Sbjct: 77 FAVLPYSKHIVHIYSYHGGDDLRNHLEIEAHAGSVNDLAFSYPNKQLCVVTCGEDRVIKV 256
Query: 482 WD-LTGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPG 540
WD +TG + + FEGHEAPVYS+CPHHKENIQFIFSTA DGKIKAWLYDNMGSRVDYDAPG
Sbjct: 257 WDAVTGAKQYTFEGHEAPVYSVCPHHKENIQFIFSTATDGKIKAWLYDNMGSRVDYDAPG 436
Query: 541 HWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQN 600
H TTM YSADGTRLFSCGT+K+G+SFLVEWNESEGA+KRTY+G K S GVVQFDTT+N
Sbjct: 437 HSSTTMSYSADGTRLFSCGTNKEGESFLVEWNESEGAVKRTYHGLGKXSTGVVQFDTTKN 616
Query: 601 RFLAAGEDSQIKFWDMD 617
RFL G+ +KFWDMD
Sbjct: 617 RFLXPGDXFMVKFWDMD 667
>TC86504 similar to GP|15028127|gb|AAK76687.1 unknown protein {Arabidopsis
thaliana}, partial (30%)
Length = 1121
Score = 264 bits (675), Expect(3) = 2e-85
Identities = 131/218 (60%), Positives = 158/218 (72%), Gaps = 3/218 (1%)
Frame = +1
Query: 352 SMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKDTP-S 410
SMDFHP QTLLLVG+N +I LWELG RERLV + FK+WD+SACS+PFQAA+VKD S
Sbjct: 466 SMDFHPVQQTLLLVGTNVADIGLWELGSRERLVLRNFKVWDLSACSMPFQAALVKDPAVS 645
Query: 411 VSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPN-KQLC 469
V+RVTWS DG+ GVA+++H++ IY+Y+G + + P +
Sbjct: 646 VNRVTWSPDGALFGVAYSRHIVQIYSYHGGX*STTALGD*CSCWRSK*SSIFSPK*AAMP 825
Query: 470 VVTCGDDKLIKVWDL-TGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYD 528
+TCGDDK IKVWD T + + FEGHEAPVYS+CPH+KENIQFIFSTA+DGKIKAWLYD
Sbjct: 826 *ITCGDDKTIKVWDAATALKQYTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYD 1005
Query: 529 NMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDS 566
N+GSRVDYDAPG CTTM YSADG CGT KD +S
Sbjct: 1006NLGSRVDYDAPGRXCTTMAYSADGXXXXXCGTXKDXES 1119
Score = 48.9 bits (115), Expect(3) = 2e-85
Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Frame = +3
Query: 212 APTPVNLPV-AAVAKPAAYTSLGVGAHGPFPPAAATANANALAGWMANASVSSSVQAAVV 270
AP+P N+P+ ++ K + LG AHGPF P A LAGWM+N +
Sbjct: 84 APSPANMPLLGSLPKVGGFPPLG--AHGPFQPTPAPVPM-PLAGWMSNPT---------- 224
Query: 271 TASTIPVPHNQVSILKRPITPSTTPGMVEYQSADHEQLMKRLRPAPSVEEVSYP------ 324
PV H VS G+ + + + KR RP +E + P
Sbjct: 225 -----PVAHPSVS-------GGGAIGLGVGGPSMPDHISKRTRPIGMSDEGNLPVNVLSA 368
Query: 325 -----SARQASWSLDDLPRTVAMSLHQGSS 349
QA S DDLP+TV +L+QGSS
Sbjct: 369 TFPGHGHGQAFNSPDDLPKTVLRTLNQGSS 458
Score = 44.3 bits (103), Expect(3) = 2e-85
Identities = 17/18 (94%), Positives = 18/18 (99%)
Frame = +1
Query: 185 LCKNPRPNPDIKTLFIDH 202
LCKNPRPNPDIKTLF+DH
Sbjct: 1 LCKNPRPNPDIKTLFVDH 54
>BG583562 similar to PIR|G96836|G9 unknown protein T21F11.18 [imported] -
Arabidopsis thaliana, partial (19%)
Length = 827
Score = 298 bits (764), Expect = 6e-81
Identities = 136/185 (73%), Positives = 162/185 (87%)
Frame = +3
Query: 496 EAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRL 555
EAPVYS+CPH+KENIQFIFSTA+DGKIKAWLYDN+GSRVDYDAPG WCTTM YSADGTRL
Sbjct: 3 EAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNLGSRVDYDAPGRWCTTMAYSADGTRL 182
Query: 556 FSCGTSKDGDSFLVEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWD 615
FSCGTSKDG+S +VEWNESEGA+KRTY GFRK+S GVVQFDTT+NR+LAAG+D IKFWD
Sbjct: 183 FSCGTSKDGESSIVEWNESEGAVKRTYQGFRKRSLGVVQFDTTKNRYLAAGDDFSIKFWD 362
Query: 616 MDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVETPAF 675
MDN+ LT+ +A+GGL P +RFNKEG+LLAV+ +NG KILAN G+R LR++E ++
Sbjct: 363 MDNIQLLTTVDADGGLPASPRIRFNKEGSLLAVSANENGIKILANGDGIRLLRSLENSSY 542
Query: 676 EALRS 680
+A R+
Sbjct: 543 DASRT 557
>BG450245 similar to GP|5922612|dbj EST AU078118(E3904) corresponds to a
region of the predicted gene.~similar to Arabidopsis
thaliana, partial (15%)
Length = 578
Score = 285 bits (730), Expect = 5e-77
Identities = 145/148 (97%), Positives = 145/148 (97%)
Frame = +2
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF
Sbjct: 134 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 313
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 120
TKVDDNRYSMKIFFEIRK KYL ALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT
Sbjct: 314 TKVDDNRYSMKIFFEIRKXKYLXALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQLLT 493
Query: 121 LTNFRENEQLSKYGDTKTARGIMLLELK 148
LTNFRENEQLSKYGDTKTARGIMLL LK
Sbjct: 494 LTNFRENEQLSKYGDTKTARGIMLLXLK 577
>TC81251 homologue to GP|5922612|dbj|BAA84613.1 EST AU078118(E3904)
corresponds to a region of the predicted gene.~similar
to Arabidopsis thaliana, partial (12%)
Length = 630
Score = 233 bits (593), Expect = 4e-61
Identities = 116/118 (98%), Positives = 118/118 (99%)
Frame = +2
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
MTSLSRELVFLILQFL+EEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYL+GF
Sbjct: 272 MTSLSRELVFLILQFLDEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLAGF 451
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQL 118
TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQL
Sbjct: 452 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLKVFSTFNEELYKEITQL 625
>TC88078 homologue to GP|15028127|gb|AAK76687.1 unknown protein {Arabidopsis
thaliana}, partial (9%)
Length = 486
Score = 172 bits (437), Expect(2) = 7e-44
Identities = 84/102 (82%), Positives = 93/102 (90%)
Frame = +2
Query: 1 MTSLSRELVFLILQFLEEEKFKESVHKLEKESGFFFNMKYFEEKVQAGEWEEVEKYLSGF 60
M+SLSRELVFLILQFLEEEKFKE+VHKLE+ESGF+FNMKYFEE+V G W+EVEKYLSGF
Sbjct: 149 MSSLSRELVFLILQFLEEEKFKEAVHKLEQESGFYFNMKYFEEEVHNGNWDEVEKYLSGF 328
Query: 61 TKVDDNRYSMKIFFEIRKQKYLEALDRQDKPKAVEILVGDLK 102
TKVDDNRYSMKIFFEIRKQKYLEALD+ D+ K V ILV D +
Sbjct: 329 TKVDDNRYSMKIFFEIRKQKYLEALDKHDRSKGVXILVKDFE 454
Score = 24.3 bits (51), Expect(2) = 7e-44
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 101 LKVFSTFNEELY 112
LKVFSTFNE L+
Sbjct: 450 LKVFSTFNEXLF 485
>CA990936 similar to GP|18377648|gb unknown protein {Arabidopsis thaliana},
partial (20%)
Length = 694
Score = 124 bits (310), Expect = 3e-28
Identities = 102/211 (48%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Frame = +3
Query: 704 LMELILRVEMRRNLGLWKM*WIELNHGSSSKLWILPTVD*LPCLTAQILRARLFDFYIQI 763
+MELIL E R+ +W * I L K L V *L C L RLF F+ I
Sbjct: 60 IMELILWPEA*RSKEVWTT*LINLKLAI*QK*LTLAIVV*LLCQILLTLLTRLFVFFTPI 239
Query: 764 LVLVFWHLGQMVFRSCGSGLGMIRILVGRRLLVLFRNIGNPTVVFL*PMMFLVSTLKKQF 823
L L FW L FRSCG+G M R V R L+LF NIGN VVF * +M + LK QF
Sbjct: 240 LGLAFWLLVLKGFRSCGNGAVMTRTPVERPQLLLFPNIGNHLVVFS*-LMTSQTVLKNQF 416
Query: 824 LALHSQRMIHMLCLHVVERFLYLT**HSR**QHSWHHLPPLR-FWLSTLKITTS*PLGWR 882
LA HSQ+MI M CL V E+F T** R* Q HLP L+ F LK S L W+
Sbjct: 417 LA*HSQKMILMSCLPVEEKFHCST**LLR*WQ-LLCHLPRLQPFSCFILKTIISLQLEWK 593
Query: 883 IQLFIFIMLEWMR*NQN*RVTKSEFLV*LFQ 913
+Q FIF LE MR N N*RVT+S LV* F+
Sbjct: 594 MQPFIFTTLELMRSNIN*RVTRSVLLV*PFR 686
>TC91738 similar to GP|15028127|gb|AAK76687.1 unknown protein {Arabidopsis
thaliana}, partial (9%)
Length = 371
Score = 109 bits (273), Expect(3) = 6e-26
Identities = 53/77 (68%), Positives = 66/77 (84%)
Frame = +1
Query: 336 LPRTVAMSLHQGSSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISA 395
LP+TV +L+QGSS SMDFHP Q+LLLVG+N G I+LWE+G RE+LVS+ FK+WD+SA
Sbjct: 46 LPKTVTRTLNQGSSPMSMDFHPVQQSLLLVGTNVGGIALWEVGSREKLVSRNFKVWDLSA 225
Query: 396 CSLPFQAAVVKDTPSVS 412
CS+PFQAA+VKD PSVS
Sbjct: 226 CSMPFQAALVKD-PSVS 273
Score = 25.4 bits (54), Expect(3) = 6e-26
Identities = 7/19 (36%), Positives = 16/19 (83%)
Frame = +3
Query: 424 GVAFTKHLIHIYAYNGSNE 442
GVA+++H++ IY+Y+ ++
Sbjct: 315 GVAYSRHIVQIYSYHTGDD 371
Score = 21.9 bits (45), Expect(3) = 6e-26
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 411 VSRVTWSLDGSFVGVAFTK 429
++RV WS DG+F+ K
Sbjct: 275 LTRVIWSPDGAFIWCCILK 331
>TC77774 similar to GP|15028127|gb|AAK76687.1 unknown protein {Arabidopsis
thaliana}, partial (31%)
Length = 1487
Score = 107 bits (267), Expect(2) = 4e-25
Identities = 112/314 (35%), Positives = 144/314 (45%), Gaps = 6/314 (1%)
Frame = +1
Query: 785 MIRILVGRRLLVLFRNIGNPTVVFL*PMMFLVSTLKKQFLALHSQRMIHMLCLHVVERFL 844
MI I + R LLV GN V * M +++ L+ Q AL +MI C H V RFL
Sbjct: 124 MIAIHLARPLLVCHLTCGNLQVAS**LMTLMITILRMQSHALLFPKMILT*CRHRVGRFL 303
Query: 845 YLT**HSR**QHSWHHLPPLRFWLSTLKITTS*PLGWRIQLFIFIMLEWMR*NQN*RVTK 904
** R *Q S HH RFWLS LKIT W I F +IM MR N +
Sbjct: 304 SSI**LLRQ*QRSCHHHLRQRFWLSILKITILLL*AWMILPFRYIMSA*MRLKVNSKAIL 483
Query: 905 SEFLV*LFQPILASWFHLVLMLIFACGALIHGRKENQFLYNYLWGRLLLVKLV--YSSIQ 962
E LV F FHL LM+ F G L+ GR N+L G L L + + Y+ I+
Sbjct: 484 KE*LVLHFLMY*MC*FHLGLMVRFLYGILMGGRSRRIDSCNFLLGGLHLHRQIHGYNFIR 663
Query: 963 TNSDYWYPMRLSWQYMMPQRWNALDSGFHKMFCLLLYHMQLILATVS*FLLHFAMATLGF 1022
T+S W+ M+LS +M Q WN SG +M L YHMQL +*+L F M
Sbjct: 664 TSSASWWYMKLSLPFMKQQNWNV*SSGSREML-LHQYHMQLSHVIAT*YLPAF*MQQSVC 840
Query: 1023 LMLTA*D*DVALHHQHTSQQRL*AEAKLCILLLWQL----IHSSPTNLPLD*LMGQ*K** 1078
+L D D L ++ +L L IH++ +L LD M
Sbjct: 841 SVLQTFDCDAV-------SILLLIFPQMSVLTFNHL*LLHIHTNQISLLLDCQMA*FMCL 999
Query: 1079 SPLNQRESGDPVHL 1092
SPL+ + SG +HL
Sbjct: 1000 SPLSPKASGVCLHL 1041
Score = 26.9 bits (58), Expect(2) = 4e-25
Identities = 13/23 (56%), Positives = 15/23 (64%)
Frame = +3
Query: 760 YIQILVLVFWHLGQMVFRSCGSG 782
YI I V++FWH QM F GSG
Sbjct: 48 YILIHVMLFWH*LQMPFIFSGSG 116
>TC85659 SP|O24076|GBLP_MEDSA Guanine nucleotide-binding protein beta
subunit-like protein. [Alfalfa] {Medicago sativa},
complete
Length = 1261
Score = 50.4 bits (119), Expect = 4e-06
Identities = 70/294 (23%), Positives = 122/294 (40%), Gaps = 10/294 (3%)
Frame = +2
Query: 350 VTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKDTP 409
VT++ + +++ S + I LW L +K K + + L + V+D
Sbjct: 113 VTAIATPIDNSDMIVTASRDKSIILWHL-------TKEDKTYGVPRRRLTGHSHFVQDVV 271
Query: 410 SVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLC 469
S ++L GS+ G + ++ N + V H V +AF+ N+Q
Sbjct: 272 LSSDGQFALSGSWDGE------LRLWDLNAGTSARRFV---GHTKDVLSVAFSIDNRQ-- 418
Query: 470 VVTCGDDKLIKVWDLTGRRLFNFEGHEAPV--YSICPHHKENIQ-FIFSTAVDGKIKAWL 526
+V+ D+ IK+W+ G + + +A S +Q I S + D +K W
Sbjct: 419 IVSASRDRTIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVSASWDRTVKVWN 598
Query: 527 YDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFLVEWNESEGAIKRTYNGFR 586
N R + T+ S DG+ S G KDG ++ W+ +EG KR Y+
Sbjct: 599 LTNCKLRNTLAGHSGYVNTVAVSPDGSLCASGG--KDG--VILLWDLAEG--KRLYSLDA 760
Query: 587 KKSAGVVQFDTTQNRF-LAAGEDSQIKFWDMDNVNPL------TSTEAEGGLQG 633
+ F + NR+ L A +S IK WD+++ + + TEA+ + G
Sbjct: 761 GSIIHALCF--SPNRYWLCAATESSIKIWDLESKSIVEDLKVDLKTEADAAIGG 916
Score = 37.4 bits (85), Expect = 0.033
Identities = 35/131 (26%), Positives = 61/131 (45%), Gaps = 19/131 (14%)
Frame = +2
Query: 446 RVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKLIKVWDLT-GRRLFNFEGHEAPVYSICP 504
R + H G VN +A + P+ LC + G D +I +WDL G+RL++ + ++++C
Sbjct: 617 RNTLAGHSGYVNTVAVS-PDGSLCA-SGGKDGVILLWDLAEGKRLYSLDAGSI-IHALCF 787
Query: 505 HHKENIQFIFSTAVDGKIKAW----------LYDNMGSRVDYDAPGH--------WCTTM 546
++ A + IK W L ++ + D G +CT++
Sbjct: 788 SPN---RYWLCAATESSIKIWDLESKSIVEDLKVDLKTEADAAIGGDTTTKKKVIYCTSL 958
Query: 547 LYSADGTRLFS 557
+SADG+ LFS
Sbjct: 959 NWSADGSTLFS 991
>TC87605 homologue to PIR|G96563|G96563 probable coatomer complex subunit
33791-27676 [imported] - Arabidopsis thaliana, partial
(23%)
Length = 765
Score = 45.1 bits (105), Expect = 2e-04
Identities = 47/185 (25%), Positives = 82/185 (43%), Gaps = 2/185 (1%)
Frame = +3
Query: 350 VTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKIWDISACSLPFQAAVVKDTP 409
V +D HP+ + +L +G + +W + + ++K F++ ++ S F
Sbjct: 177 VKCVDLHPT-EPWILASLYSGTVCIWNY--QSQTMAKSFEVTELPVRSAKF--------- 320
Query: 410 SVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEIDAHIGGVNDLAFAHPNKQLC 469
V+R W + G+ I +Y YN +++ +AH + +A HP
Sbjct: 321 -VARKQWVVAGA------DDMFIRVYNYNTMDKVKV---FEAHTDYIRCVA-VHPTLPY- 464
Query: 470 VVTCGDDKLIKVWDLTGRRLFN--FEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLY 527
V++ DD LIK+WD + FEGH V + + K+ F S ++D IK W
Sbjct: 465 VLSSSDDMLIKLWDWEKGWICTQIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTIKIW-- 635
Query: 528 DNMGS 532
N+GS
Sbjct: 636 -NLGS 647
>TC79118 similar to GP|16323188|gb|AAL15328.1 AT5g67320/K8K14_4 {Arabidopsis
thaliana}, partial (44%)
Length = 1098
Score = 43.1 bits (100), Expect = 6e-04
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 463 HPNKQLCVVTCGDDKLIKVWDL-TGRRLFNFEGHEAPVYSICPHHKENIQFIFSTAVDGK 521
+PNK+L + + D +K+WD+ G+ + + GH PVYS+ N ++I S ++D
Sbjct: 494 NPNKKLLLASASFDSTVKLWDIELGKLIHSLNGHRHPVYSVA--FSPNGEYIASGSLDKS 667
Query: 522 IKAW 525
+ W
Sbjct: 668 LHIW 679
>TC82717 weakly similar to GP|21539583|gb|AAM53344.1 putative coatomer
complex subunit {Arabidopsis thaliana}, partial (29%)
Length = 1118
Score = 42.0 bits (97), Expect = 0.001
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 444 AQRVEIDAHIGGVNDLAFAHPNKQLCVVTCGDDKLIKVWDLTGRR-LFNFEGHEAPVYSI 502
A + H+ G+N + + N + +++ DD KVWD + + EGH+ V +I
Sbjct: 616 APNFTFEGHLKGMNCVDYFESNDKQYLLSGSDDYTAKVWDYDSKNCVQTLEGHKNNVTAI 795
Query: 503 CPHHKENIQFIFSTAVDGKIKAW 525
C H I I + + D +K W
Sbjct: 796 CAH--PEIPIIITASEDSTVKIW 858
Score = 36.6 bits (83), Expect = 0.056
Identities = 43/189 (22%), Positives = 74/189 (38%), Gaps = 5/189 (2%)
Frame = +1
Query: 475 DDKLIKVWDLTGRRLFN--FEGHEAPVYSICPHHKENIQFIFSTAVDGKIKAWLYDNMGS 532
DD+++K+W+ + FEG+ V + + K+ F S ++DG +K W D+
Sbjct: 445 DDQVLKLWNWKKGWSCDETFEGNSHYVMQVAFNPKDPSTFA-SASLDGTLKIWTIDSSAP 621
Query: 533 RVDYDA--PGHWCTTMLYSADGTRLFSCGTSKDGDSFLVE-WNESEGAIKRTYNGFRKKS 589
++ G C S D L S D + + W+ +T G +
Sbjct: 622 NFTFEGHLKGMNCVDYFESNDKQYLLS-----GSDDYTAKVWDYDSKNCVQTLEGHKNNV 786
Query: 590 AGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAEGGLQGLPHLRFNKEGNLLAVT 649
+ + A EDS +K WD V + GL+ + + + K + LA
Sbjct: 787 TAICAHPEIPI-IITASEDSTVKIWDA--VTYRLQNTLDFGLERVWSIGYKKGSSQLAF- 954
Query: 650 TADNGFKIL 658
D GF I+
Sbjct: 955 GCDKGFIIV 981
>TC88481 similar to PIR|T00806|T02445 probable U4/U6 small nuclear
ribonucleoprotein [imported] - Arabidopsis thaliana,
partial (60%)
Length = 1836
Score = 41.2 bits (95), Expect = 0.002
Identities = 44/224 (19%), Positives = 82/224 (35%)
Frame = +1
Query: 449 IDAHIGGVNDLAFAHPNKQLCVVTCGDDKLIKVWDLTGRRLFNFEGHEAPVYSICPHHKE 508
+ H D+A++ +K + T D+ K W+ G L F+GH + I H
Sbjct: 1063 LKGHTQRATDVAYSPVHKNH-LATASADRTAKYWNDQGALLGTFKGHLERLARIAFHPSG 1239
Query: 509 NIQFIFSTAVDGKIKAWLYDNMGSRVDYDAPGHWCTTMLYSADGTRLFSCGTSKDGDSFL 568
+++ + + D + W + + + + + DG+ SCG D+
Sbjct: 1240 --KYLGTASYDKTWRLWDVETEEELLLQEGHSRSVYGLDFHHDGSLAASCGL----DALA 1401
Query: 569 VEWNESEGAIKRTYNGFRKKSAGVVQFDTTQNRFLAAGEDSQIKFWDMDNVNPLTSTEAE 628
W+ G G K G+ F GED+ + WD+ L + A
Sbjct: 1402 RVWDLRTGRSVLALEGHVKSILGI-SFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAH 1578
Query: 629 GGLQGLPHLRFNKEGNLLAVTTADNGFKILANAGGLRSLRTVET 672
L + ++F + VT + + + A R + V+T
Sbjct: 1579 SNL--ISQVKFEPQEGYFLVTAS---YDMTAKVWSSRDFKPVKT 1695
Score = 38.1 bits (87), Expect = 0.019
Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 1/173 (0%)
Frame = +1
Query: 331 WSLDDLPRTVAMSLHQGSSVTSMDFHPSHQTLLLVGSNNGEISLWELGMRERLVSKPFKI 390
WS+ ++ + + H T + + P H+ L S + W
Sbjct: 1030 WSMPNVKKVSTLKGHT-QRATDVAYSPVHKNHLATASADRTAKYWN-------------- 1164
Query: 391 WDISACSLPFQAAVVKDTPSVSRVTWSLDGSFVGVAFTKHLIHIYAYNGSNELAQRVEID 450
D A F+ + + ++R+ + G ++G A ++ EL + +
Sbjct: 1165 -DQGALLGTFKGHLER----LARIAFHPSGKYLGTASYDKTWRLWDVETEEELLLQ---E 1320
Query: 451 AHIGGVNDLAFAHPNKQLCVVTCGDDKLIKVWDL-TGRRLFNFEGHEAPVYSI 502
H V L F H +CG D L +VWDL TGR + EGH + I
Sbjct: 1321 GHSRSVYGLDFHHDGS--LAASCGLDALARVWDLRTGRSVLALEGHVKSILGI 1473
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.333 0.143 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,481,968
Number of Sequences: 36976
Number of extensions: 614167
Number of successful extensions: 5053
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 2851
Number of HSP's successfully gapped in prelim test: 250
Number of HSP's that attempted gapping in prelim test: 2021
Number of HSP's gapped (non-prelim): 3333
length of query: 1115
length of database: 9,014,727
effective HSP length: 106
effective length of query: 1009
effective length of database: 5,095,271
effective search space: 5141128439
effective search space used: 5141128439
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 64 (29.3 bits)
Medicago: description of AC144513.3