BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144513.18 + phase: 0
(107 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC77378 similar to PIR|D86223|D86223 hypothetical protein [impor... 185 2e-48
TC84955 similar to GP|9716226|emb|CAC01587.1 putative lipoprotei... 34 0.008
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar... 32 0.050
TC82261 similar to GP|10177249|dbj|BAB10717. contains similarity... 31 0.065
TC89384 similar to GP|15450417|gb|AAK96502.1 At1g26300/F28B23_4 ... 30 0.11
BQ751207 weakly similar to GP|604427|gb|AA ACOB protein {Emerice... 28 0.55
TC85538 homologue to GP|14764466|gb|AAK72098.1 myo-inositol-1-ph... 28 0.72
TC88719 similar to GP|9759033|dbj|BAB09360.1 acyl-peptide hydrol... 28 0.72
TC90515 similar to GP|9759033|dbj|BAB09360.1 acyl-peptide hydrol... 28 0.72
BF638991 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 27 0.94
TC90426 similar to GP|10177859|dbj|BAB11211. NAC2-like protein {... 27 0.94
TC78095 weakly similar to PIR|G84776|G84776 hypothetical protein... 27 0.94
AL389740 similar to GP|20330749|gb| Unknown protein {Oryza sativ... 27 1.2
BF637306 similar to GP|20330749|gb Unknown protein {Oryza sativa... 27 1.2
BI272031 weakly similar to GP|50502|emb|C collagen alpha chain p... 27 1.6
TC77895 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 ... 27 1.6
TC80837 similar to GP|20260484|gb|AAM13140.1 unknown protein {Ar... 27 1.6
TC80386 weakly similar to GP|10800070|dbj|BAB16490. contains EST... 27 1.6
AW695306 similar to GP|5702039|emb| Fuct c3 protein {Vigna radia... 27 1.6
TC77444 similar to GP|4468193|emb|CAB38030.1 inosine monophospha... 27 1.6
>TC77378 similar to PIR|D86223|D86223 hypothetical protein [imported] -
Arabidopsis thaliana, partial (54%)
Length = 1372
Score = 185 bits (470), Expect = 2e-48
Identities = 92/95 (96%), Positives = 93/95 (97%)
Frame = +1
Query: 1 MATCFRVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESS 60
MATCFRVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESS
Sbjct: 142 MATCFRVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESS 321
Query: 61 PETLFNPSSSPDNLPFLDIFDSPQLMATPAQVSNS 95
PETLFNPSSSPDNLPFLDIFDSPQLMATPAQ+ S
Sbjct: 322 PETLFNPSSSPDNLPFLDIFDSPQLMATPAQLERS 426
>TC84955 similar to GP|9716226|emb|CAC01587.1 putative lipoprotein
{Streptomyces coelicolor A3(2)}, partial (2%)
Length = 650
Score = 34.3 bits (77), Expect = 0.008
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -1
Query: 8 PISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNP 67
P + MPASSTR + T LR LR ++++ + P P F ++ V L P
Sbjct: 479 PSTNSAPMPASSTRTSSTALRPLRRLSSLRSGRTPRTPGTGFPARSVLVLMLPRRRLARP 300
Query: 68 SSSP 71
P
Sbjct: 299 RRRP 288
>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
thaliana}, partial (3%)
Length = 805
Score = 31.6 bits (70), Expect = 0.050
Identities = 26/97 (26%), Positives = 39/97 (39%), Gaps = 8/97 (8%)
Frame = +3
Query: 8 PISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNP 67
P+S TS PAS+ +P T + + S +P + P A SSP + +P
Sbjct: 120 PVSTTTSPPASTPASSPVSTTTSPPASTPASSPVPTTTSPP-----APTPASSPVSTNSP 284
Query: 68 SSSPDN--------LPFLDIFDSPQLMATPAQVSNSN 96
++SP P SP +TP +SN
Sbjct: 285 TASPAGSLPAAATPSPSSTTAGSPSPSSTPPGTRSSN 395
>TC82261 similar to GP|10177249|dbj|BAB10717. contains similarity to
phytocyanin/early nodulin-like protein~gene_id:K19P17.3,
partial (7%)
Length = 740
Score = 31.2 bits (69), Expect = 0.065
Identities = 23/62 (37%), Positives = 31/62 (49%)
Frame = +1
Query: 32 TVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQ 91
T + +S S+ P N FL L + E SP +PSSSP P I SP +++TP
Sbjct: 418 TPSPVSPSESPSNSPSFFLPSLLTSPELSP----SPSSSPSPSPV--ISPSPTVLSTPPH 579
Query: 92 VS 93
S
Sbjct: 580 SS 585
>TC89384 similar to GP|15450417|gb|AAK96502.1 At1g26300/F28B23_4
{Arabidopsis thaliana}, partial (46%)
Length = 801
Score = 30.4 bits (67), Expect = 0.11
Identities = 26/84 (30%), Positives = 35/84 (40%), Gaps = 1/84 (1%)
Frame = +2
Query: 20 TRFTPTRLRTLRTVNAISKSKIPFNPND-PFLSKLASVAESSPETLFNPSSSPDNLPFLD 78
+ FT T+ +T S K NPN P L SSP+ NP +SP LP
Sbjct: 104 SHFTTTKWKTSGKERRHSPKKPQKNPNL*PPPPPLLESPISSPKPPRNPKNSPPKLPRKQ 283
Query: 79 IFDSPQLMATPAQVSNSNFSFHFL 102
+ +P L P + S + FL
Sbjct: 284 MRSNPPLSVKPIRSSPFPITSPFL 355
>BQ751207 weakly similar to GP|604427|gb|AA ACOB protein {Emericella
nidulans}, partial (12%)
Length = 758
Score = 28.1 bits (61), Expect = 0.55
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 44 NPNDPFL--SKLASVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQVSNSNFSFHF 101
N +PFL SK A+ ++ + + +S+P+ F ++ ++PQ+ A +++S+ H
Sbjct: 57 NALEPFLALSKSATSPRAAADLITRATSNPNTYVFTELLETPQIQA----LASSDLHSHL 224
Query: 102 LQIE 105
+E
Sbjct: 225 TLLE 236
>TC85538 homologue to GP|14764466|gb|AAK72098.1 myo-inositol-1-phosphate
synthase {Glycine max}, complete
Length = 1862
Score = 27.7 bits (60), Expect = 0.72
Identities = 22/71 (30%), Positives = 33/71 (45%), Gaps = 4/71 (5%)
Frame = +1
Query: 26 RLRTLRTVNAISKSKIPFNPNDPFLSKLASV----AESSPETLFNPSSSPDNLPFLDIFD 81
R+ L T N S + ND + A+V +E SP TLF + +N+PF++
Sbjct: 769 RVVVLWTANTERYSNLVVGLNDTMENLFAAVDRNESEISPSTLFAIACVMENVPFIN--G 942
Query: 82 SPQLMATPAQV 92
SPQ P +
Sbjct: 943 SPQNTFVPGLI 975
>TC88719 similar to GP|9759033|dbj|BAB09360.1 acyl-peptide hydrolase-like
{Arabidopsis thaliana}, partial (63%)
Length = 1342
Score = 27.7 bits (60), Expect = 0.72
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 68 SSSPDNLPFLDIFDSPQLMATPAQVSNSNFSFHF 101
SSSPD+L + P+L+ P +V N +F
Sbjct: 656 SSSPDSLKYSSYISKPELIEFPTEVPGQNAYAYF 757
>TC90515 similar to GP|9759033|dbj|BAB09360.1 acyl-peptide hydrolase-like
{Arabidopsis thaliana}, partial (20%)
Length = 749
Score = 27.7 bits (60), Expect = 0.72
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 68 SSSPDNLPFLDIFDSPQLMATPAQVSNSNFSFHF 101
SSSPD+L + P+L+ P +V N +F
Sbjct: 48 SSSPDSLKYSSYISKPELIEFPTEVPGQNAYAYF 149
>BF638991 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (5%)
Length = 482
Score = 27.3 bits (59), Expect = 0.94
Identities = 22/73 (30%), Positives = 30/73 (40%)
Frame = +1
Query: 6 RVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLF 65
+ P S P S SS P R N K + +N N +L L T+
Sbjct: 58 QTPSSYPPSQ--SSNSIVPNRYPNR---NGYIKFRTTYNENLHYLKAL---------TII 195
Query: 66 NPSSSPDNLPFLD 78
NP++ P+NLP D
Sbjct: 196 NPNTKPNNLPHPD 234
>TC90426 similar to GP|10177859|dbj|BAB11211. NAC2-like protein {Arabidopsis
thaliana}, partial (36%)
Length = 1234
Score = 27.3 bits (59), Expect = 0.94
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 51 SKLASVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATP 89
S + +++ ++L P++ D L LDIFDSP+ P
Sbjct: 882 SDACNASDAQHQSLEVPAAEEDQLLNLDIFDSPRFELEP 998
>TC78095 weakly similar to PIR|G84776|G84776 hypothetical protein At2g36090
[imported] - Arabidopsis thaliana, partial (19%)
Length = 1467
Score = 27.3 bits (59), Expect = 0.94
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 13 TSMPASSTRF-TPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNPSSSP 71
TS+P S+ F T ++ L + S + PN+ + + S T NP+SSP
Sbjct: 126 TSLPLSTLSFLTQHKIFILFLLKPFQYSNTNYQPNNIHIHLWIHQSPPSTPTYSNPTSSP 305
Query: 72 D 72
D
Sbjct: 306 D 308
>AL389740 similar to GP|20330749|gb| Unknown protein {Oryza sativa (japonica
cultivar-group)}, partial (59%)
Length = 383
Score = 26.9 bits (58), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (51%), Gaps = 2/42 (4%)
Frame = -2
Query: 44 NPNDPFLSKL--ASVAESSPETLFNPSSSPDNLPFLDIFDSP 83
N +P+L K+ ++A+ + FNP+ + PFL D P
Sbjct: 145 NTTNPYLIKM*KVNLAKMAARAAFNPADTAHAYPFLPFDDPP 20
>BF637306 similar to GP|20330749|gb Unknown protein {Oryza sativa (japonica
cultivar-group)}, partial (92%)
Length = 645
Score = 26.9 bits (58), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (51%), Gaps = 2/42 (4%)
Frame = -3
Query: 44 NPNDPFLSKL--ASVAESSPETLFNPSSSPDNLPFLDIFDSP 83
N +P+L K+ ++A+ + FNP+ + PFL D P
Sbjct: 139 NTTNPYLIKM*KVNLAKMAARAAFNPADTAHAYPFLPFDDPP 14
>BI272031 weakly similar to GP|50502|emb|C collagen alpha chain precursor (AA
-27 to 1127) {Mus musculus}, partial (3%)
Length = 540
Score = 26.6 bits (57), Expect = 1.6
Identities = 17/48 (35%), Positives = 24/48 (49%)
Frame = +3
Query: 42 PFNPNDPFLSKLASVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATP 89
P PN P S + ++PET +P+ SPD+ P + SP TP
Sbjct: 285 PGTPNTPNTPASPSPS-TTPETPDSPTPSPDDSPAPNTPASPNPSTTP 425
>TC77895 similar to GP|18087577|gb|AAL58919.1 AT4g00150/F6N15_20 {Arabidopsis
thaliana}, partial (41%)
Length = 2591
Score = 26.6 bits (57), Expect = 1.6
Identities = 17/51 (33%), Positives = 25/51 (48%), Gaps = 1/51 (1%)
Frame = -3
Query: 10 SMPTSMPASSTRFTPTRLRTLRTVNAISKSKI-PFNPNDPFLSKLASVAES 59
S P ++PA+ + + RTLRT+ SK P N N P + V +S
Sbjct: 2295 SAPNTLPATL*SY*TSTARTLRTIVGFSKEVFYPANANGPKQASQLPVEDS 2143
>TC80837 similar to GP|20260484|gb|AAM13140.1 unknown protein {Arabidopsis
thaliana}, partial (13%)
Length = 822
Score = 26.6 bits (57), Expect = 1.6
Identities = 16/36 (44%), Positives = 22/36 (60%)
Frame = -3
Query: 59 SSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQVSN 94
+S ETL N SPDNL FDSP+++ A +S+
Sbjct: 634 NSCETLGN---SPDNLASEP*FDSPEVLVESANLSD 536
>TC80386 weakly similar to GP|10800070|dbj|BAB16490. contains ESTs
C61063(AU063369) C61063(AU093310)~unknown protein,
partial (17%)
Length = 655
Score = 26.6 bits (57), Expect = 1.6
Identities = 13/39 (33%), Positives = 20/39 (50%)
Frame = -3
Query: 38 KSKIPFNPNDPFLSKLASVAESSPETLFNPSSSPDNLPF 76
K+ I + + PFLS + + SSP +L S + PF
Sbjct: 518 KASILLSGDTPFLSNFTAASTSSPFSLSKTSEEDEPYPF 402
>AW695306 similar to GP|5702039|emb| Fuct c3 protein {Vigna radiata var.
radiata}, partial (13%)
Length = 269
Score = 26.6 bits (57), Expect = 1.6
Identities = 20/70 (28%), Positives = 33/70 (46%), Gaps = 3/70 (4%)
Frame = -2
Query: 5 FRVPISMPTSMPASSTRFTPTRLRTLRTV---NAISKSKIPFNPNDPFLSKLASVAESSP 61
F VPI + P + T P +L+ + V ++++ + PN L++ SP
Sbjct: 250 FPVPIKPKFTCPLNMTSI-PVQLQKQKQVP**SSLNMEQASSLPNHSSQLSLSNSKFLSP 74
Query: 62 ETLFNPSSSP 71
T+ NP SSP
Sbjct: 73 PTISNPKSSP 44
>TC77444 similar to GP|4468193|emb|CAB38030.1 inosine monophosphate
dehydrogenase {Glycine max}, partial (98%)
Length = 1935
Score = 26.6 bits (57), Expect = 1.6
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
Frame = +1
Query: 5 FRVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPF-----------NPNDPFLSKL 53
F P+S+ +M +SS+ T T L T +S + PF +PN P+L
Sbjct: 103 FSTPVSLTPTMTSSSSLTTSTSLLMKSTSPPVSAAISPFQLPSSLLLWTPSPNPPWLLPW 282
Query: 54 ASVAES 59
+ ES
Sbjct: 283 LHLVES 300
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.317 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,401,159
Number of Sequences: 36976
Number of extensions: 44853
Number of successful extensions: 438
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of query: 107
length of database: 9,014,727
effective HSP length: 83
effective length of query: 24
effective length of database: 5,945,719
effective search space: 142697256
effective search space used: 142697256
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)
Medicago: description of AC144513.18