TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144477.10 - phase: 0 /pseudo
         (200 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC82122 weakly similar to GP|15010776|gb|AAK74047.1 At2g11890/F2...   188  1e-48
AL376110 weakly similar to GP|15010776|gb| At2g11890/F23M2.5 {Ar...   162  8e-41
TC78583 similar to GP|4097585|gb|AAD09518.1| NTGP4 {Nicotiana ta...    28  1.8
BE323735 similar to GP|21592923|gb induced upon wounding stress ...    27  5.3
TC85524 similar to SP|P93508|CRTC_RICCO Calreticulin precursor. ...    27  5.3
BG645999 similar to GP|16930745|gb NADH-ubiquinone oxidoreductas...    27  5.3
TC77464 similar to GP|13272433|gb|AAK17155.1 unknown protein {Ar...    27  6.9
TC87770 similar to GP|14970762|emb|CAC44460. protein tyrosine ph...    26  9.0

>TC82122 weakly similar to GP|15010776|gb|AAK74047.1 At2g11890/F23M2.5
           {Arabidopsis thaliana}, partial (26%)
          Length = 943

 Score =  188 bits (477), Expect = 1e-48
 Identities = 94/101 (93%), Positives = 94/101 (93%)
 Frame = +1

Query: 1   MEVEVKLRLPNADSYHRVTTLLSPFHVITHRQHNLFFDGAGSELSSRRAILRLRFYGDDE 60
           MEVEVKLRLPNADSYHRVTTLLSPFHVITHRQHNLFFDGAGSELSSRRAILRLRFYGDDE
Sbjct: 640 MEVEVKLRLPNADSYHRVTTLLSPFHVITHRQHNLFFDGAGSELSSRRAILRLRFYGDDE 819

Query: 61  RCVVSLKAKAVLVDGVSRVEEDEEDLDPKIGRDCVDEPGKL 101
           RCVVSLKAKAVLVDGVS VE   EDLDP IG  CVDEPGKL
Sbjct: 820 RCVVSLKAKAVLVDGVSXVEXXXEDLDPXIGXXCVDEPGKL 942


>AL376110 weakly similar to GP|15010776|gb| At2g11890/F23M2.5 {Arabidopsis
           thaliana}, partial (37%)
          Length = 404

 Score =  162 bits (410), Expect = 8e-41
 Identities = 78/78 (100%), Positives = 78/78 (100%)
 Frame = +2

Query: 123 GFVGLGGFKNVRNVYDWKGLKLEVDETHFDFGTLFEIECESSDPEEAKRILEEFLKENGI 182
           GFVGLGGFKNVRNVYDWKGLKLEVDETHFDFGTLFEIECESSDPEEAKRILEEFLKENGI
Sbjct: 2   GFVGLGGFKNVRNVYDWKGLKLEVDETHFDFGTLFEIECESSDPEEAKRILEEFLKENGI 181

Query: 183 DYSYSVASKFAIFRAGKL 200
           DYSYSVASKFAIFRAGKL
Sbjct: 182 DYSYSVASKFAIFRAGKL 235


>TC78583 similar to GP|4097585|gb|AAD09518.1| NTGP4 {Nicotiana tabacum},
           partial (86%)
          Length = 1269

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
 Frame = +3

Query: 51  LRLRFYGDDERCVVSLKA---------KAVLVDGVSRVEEDEEDLDPKIGRDC 94
           +R RF  ++E  + SL+            V+  G   +E+DE+ LD  +GR+C
Sbjct: 414 VRSRFSEEEENALRSLQTLFGSKIVDYMIVVFTGGDELEDDEDTLDDYLGREC 572


>BE323735 similar to GP|21592923|gb induced upon wounding stress {Arabidopsis
           thaliana}, partial (26%)
          Length = 356

 Score = 26.9 bits (58), Expect = 5.3
 Identities = 14/30 (46%), Positives = 19/30 (62%), Gaps = 4/30 (13%)
 Frame = -3

Query: 114 EEFGVVGENGFVGLG----GFKNVRNVYDW 139
           E+ G +GENG  GLG    G+  + NV+DW
Sbjct: 354 EDVGNIGENGEFGLGVI*IGYVTL-NVFDW 268


>TC85524 similar to SP|P93508|CRTC_RICCO Calreticulin precursor. [Castor bean]
            {Ricinus communis}, partial (93%)
          Length = 1699

 Score = 26.9 bits (58), Expect = 5.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 130  FKNVRNVYDWKGLK-LEVDETHFDFGTLFEIECESSDPEEAKRILEE 175
            FK+  ++Y +  LK + ++      GTLF+    + DPE AK++ EE
Sbjct: 991  FKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPEYAKQVAEE 1131


>BG645999 similar to GP|16930745|gb NADH-ubiquinone oxidoreductase {Retama
           raetam}, partial (84%)
          Length = 742

 Score = 26.9 bits (58), Expect = 5.3
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 130 FKNVRNVYDWKGLK-LEVDETHFDFGTLFEIECESSDPEEAKRILEE 175
           FK+  ++Y +  LK + ++      GTLF+    + DPE AK++ EE
Sbjct: 539 FKDDPDIYVFPKLKYVGIELWQVKSGTLFDNVVITDDPEYAKQVAEE 679


>TC77464 similar to GP|13272433|gb|AAK17155.1 unknown protein {Arabidopsis
           thaliana}, partial (24%)
          Length = 1109

 Score = 26.6 bits (57), Expect = 6.9
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = +1

Query: 111 RVKEEFGVVGENGFVGLGGFKNVRNVYDW 139
           RVK   G VGE G    GG    R VYDW
Sbjct: 523 RVKCFNGAVGETGAA*GGGS*RRREVYDW 609


>TC87770 similar to GP|14970762|emb|CAC44460. protein tyrosine phosphatase
           {Lycopersicon esculentum}, partial (82%)
          Length = 1714

 Score = 26.2 bits (56), Expect = 9.0
 Identities = 15/37 (40%), Positives = 20/37 (53%)
 Frame = +3

Query: 9   LPNADSYHRVTTLLSPFHVITHRQHNLFFDGAGSELS 45
           LP + S  +  TL+SP    T R HN+F   + S LS
Sbjct: 303 LPRSSSVLQFHTLVSP--PSTARHHNIFLPSSSSSLS 407


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.141    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,548,860
Number of Sequences: 36976
Number of extensions: 73395
Number of successful extensions: 339
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of query: 200
length of database: 9,014,727
effective HSP length: 91
effective length of query: 109
effective length of database: 5,649,911
effective search space: 615840299
effective search space used: 615840299
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)