BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144474.3 + phase: 0
(449 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC85408 homologue to PIR|S20869|S20869 tubulin beta-2 chain - ga... 922 0.0
TC85406 SP|P29500|TBB1_PEA Tubulin beta-1 chain. [Garden pea] {P... 875 0.0
TC85410 homologue to PIR|JC2510|JC2510 beta-tubulin R1623 - rice... 870 0.0
TC85405 SP|Q39445|TBB_CICAR Tubulin beta chain. [Chickpea Garba... 845 0.0
TC86477 homologue to GP|15408819|dbj|BAB64211. tubulin beta-4 ch... 831 0.0
TC77912 homologue to GP|10176853|dbj|BAB10059. beta tubulin {Ara... 446 0.0
TC85409 homologue to PIR|S20869|S20869 tubulin beta-2 chain - ga... 466 e-132
TC85407 SP|P28551|TBB3_SOYBN Tubulin beta chain (Fragment). [Soy... 305 e-119
TC76676 homologue to SP|P20363|TBA3_ARATH Tubulin alpha-3/alpha-... 395 e-110
TC76675 SP|P46259|TBA1_PEA Tubulin alpha-1 chain. [Garden pea] {... 389 e-108
TC76677 homologue to SP|P33629|TBA_PRUDU Tubulin alpha chain. [A... 289 1e-80
CA921757 homologue to SP|Q41784|TBB7 Tubulin beta-7 chain (Beta-... 287 7e-78
AW689076 homologue to PIR|JA0048|JA0 tubulin beta-1 chain - soyb... 272 2e-73
TC76674 homologue to GP|23452339|gb|AAN33000.1 alpha-tubulin 4 {... 271 4e-73
TC90170 homologue to GP|12963226|gb|AAK11179.1 alpha-tubulin {Co... 241 4e-64
AL369498 homologue to GP|4079637|emb beta-tubulin {Tetrahymena p... 221 3e-58
BG644366 GP|17402471|em alpha-tubulin {Nicotiana tabacum}, parti... 210 8e-55
AL369497 homologue to SP|O04386|TBB_ Tubulin beta chain. {Chlamy... 210 8e-55
TC92572 similar to SP|Q9ZRB0|TBB3_WHEAT Tubulin beta-3 chain (Be... 198 3e-51
TC91984 homologue to GP|16611919|gb|AAL27406.1 alpha-tubulin {Ar... 187 9e-48
>TC85408 homologue to PIR|S20869|S20869 tubulin beta-2 chain - garden pea
(fragment), complete
Length = 2121
Score = 922 bits (2382), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 60
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV
Sbjct: 431 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 610
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 611 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 790
Query: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 791 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 970
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 971 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 1150
Query: 241 RFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMM 300
RFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMM
Sbjct: 1151RFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMM 1330
Query: 301 CAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360
CAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG
Sbjct: 1331CAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 1510
Query: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 1511LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1690
Query: 421 EYQQYQDATAEEDEYEDEEEDYQQEHDEA 449
EYQQYQDATAEEDEYEDEEEDYQQEHDEA
Sbjct: 1691EYQQYQDATAEEDEYEDEEEDYQQEHDEA 1777
>TC85406 SP|P29500|TBB1_PEA Tubulin beta-1 chain. [Garden pea] {Pisum
sativum}, partial (98%)
Length = 1745
Score = 875 bits (2261), Expect = 0.0
Identities = 423/447 (94%), Positives = 438/447 (97%), Gaps = 2/447 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 60
MR+ILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRY GDSDLQLERI+VYYNEASGGRFV
Sbjct: 116 MRQILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERIDVYYNEASGGRFV 295
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDS+RSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 296 PRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 475
Query: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 476 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 655
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADE MVLDNEALYDICFR LKL+ PSFGDLNHLISATMSGVTCCL
Sbjct: 656 EPYNATLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGDLNHLISATMSGVTCCL 835
Query: 241 RFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMM 300
RFPGQLNSDLRKLAVNL+PFPRLHFFM+GFAPLTSRGSQQYR LSVPE+TQQMWD+KNMM
Sbjct: 836 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELTQQMWDAKNMM 1015
Query: 301 CAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360
CAADPRHGRYLTASA+FRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSTVCDIPPTG
Sbjct: 1016CAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 1195
Query: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 1196LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 1375
Query: 421 EYQQYQDATAEEDEY--EDEEEDYQQE 445
EYQQYQDATA+EDEY E+ EEDY+Q+
Sbjct: 1376EYQQYQDATADEDEYGEEEGEEDYEQQ 1456
>TC85410 homologue to PIR|JC2510|JC2510 beta-tubulin R1623 - rice, complete
Length = 2139
Score = 870 bits (2248), Expect = 0.0
Identities = 423/447 (94%), Positives = 438/447 (97%), Gaps = 1/447 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 60
MREILH+QGGQCGNQIG+KFWEVVC EHGIDPTGRYVG+SDLQLER+NVYYNEAS GRFV
Sbjct: 95 MREILHVQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRFV 274
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 275 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 454
Query: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 455 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 634
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 635 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 814
Query: 241 RFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMM 300
RFPGQLNSDLRKLAVNL+PFPRLHFFM+GFAPLTSRGSQQYRAL+VPE+TQQMWDSKNMM
Sbjct: 815 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 994
Query: 301 CAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360
CAADPRHGRYLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 995 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 1174
Query: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 1175LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 1354
Query: 421 EYQQYQDATA-EEDEYEDEEEDYQQEH 446
EYQQYQDATA EE EY+DEEE+ +Q+H
Sbjct: 1355EYQQYQDATADEEGEYDDEEEE-EQDH 1432
>TC85405 SP|Q39445|TBB_CICAR Tubulin beta chain. [Chickpea Garbanzo] {Cicer
arietinum}, partial (98%)
Length = 1840
Score = 845 bits (2182), Expect = 0.0
Identities = 407/442 (92%), Positives = 431/442 (97%), Gaps = 3/442 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYV--GDSDLQLERINVYYNEASGGR 58
MREILH+QGGQCGNQIG+KFWEV+C EHGIDPTG+YV G +D QLERINVYYNEASGGR
Sbjct: 230 MREILHVQGGQCGNQIGSKFWEVICDEHGIDPTGKYVSEGGNDTQLERINVYYNEASGGR 409
Query: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAVLMDLEPGTM+S+RSGP+G+IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 410 YVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 589
Query: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
VVRKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT
Sbjct: 590 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 769
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSGVTC
Sbjct: 770 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTC 949
Query: 239 CLRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKN 298
CLRFPGQLNSDLRKLAVNL+PFPRLHFFM+GFAPLTSRGSQQY +L+VPE+TQQMWD+KN
Sbjct: 950 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKN 1129
Query: 299 MMCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP 358
MMCAADPRHGRYLTASA+FRGKMSTKEVDEQ+INVQNKNSSYFVEWIPNNVKS+VCDIPP
Sbjct: 1130MMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPP 1309
Query: 359 TGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
LKM+STFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL
Sbjct: 1310KNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 1489
Query: 419 VSEYQQYQDATA-EEDEYEDEE 439
V+EYQQYQDA A EED+YE+EE
Sbjct: 1490VAEYQQYQDAIAEEEDDYEEEE 1555
>TC86477 homologue to GP|15408819|dbj|BAB64211. tubulin beta-4 chain {Oryza
sativa (japonica cultivar-group)}, partial (98%)
Length = 1816
Score = 831 bits (2147), Expect = 0.0
Identities = 401/448 (89%), Positives = 424/448 (94%), Gaps = 1/448 (0%)
Frame = +1
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQ-LERINVYYNEASGGRF 59
MREILHIQGGQCGNQIG KFWE VC EHGIDP G+Y+G+S LQ LER+NVYYNE S GR+
Sbjct: 79 MREILHIQGGQCGNQIGTKFWEAVCDEHGIDPIGQYIGNSKLQQLERVNVYYNEGSNGRY 258
Query: 60 VPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 119
VPRAVLMDLEPGTMD+VRSGPYGQIFRPDNFVFGQSGAGNN+AKGHYTEGAELID VLDV
Sbjct: 259 VPRAVLMDLEPGTMDAVRSGPYGQIFRPDNFVFGQSGAGNNFAKGHYTEGAELIDFVLDV 438
Query: 120 VRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 179
VRKE EN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV
Sbjct: 439 VRKEVENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 618
Query: 180 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 239
VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC
Sbjct: 619 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCC 798
Query: 240 LRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNM 299
LRFPGQLNSDLRKLAVNL+PFPRLHFFM+GFAPLTS+GSQ YRAL+VPE+TQQMWD+KNM
Sbjct: 799 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSQGSQNYRALTVPELTQQMWDAKNM 978
Query: 300 MCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT 359
MCAADPRHGRYLTASA+FRGKMSTKEVDEQ++NVQNKNSSYFVEWIPNNVKS+VCD+PP
Sbjct: 979 MCAADPRHGRYLTASAVFRGKMSTKEVDEQVMNVQNKNSSYFVEWIPNNVKSSVCDVPPR 1158
Query: 360 GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 419
GL MASTF+GNSTSIQEMFRRVSEQF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
Sbjct: 1159GLSMASTFVGNSTSIQEMFRRVSEQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV 1338
Query: 420 SEYQQYQDATAEEDEYEDEEEDYQQEHD 447
+EYQQYQDA ED +DYQ+E D
Sbjct: 1339AEYQQYQDAPVYED-----GDDYQEEED 1407
>TC77912 homologue to GP|10176853|dbj|BAB10059. beta tubulin {Arabidopsis
thaliana}, complete
Length = 1732
Score = 446 bits (1147), Expect(2) = 0.0
Identities = 215/223 (96%), Positives = 218/223 (97%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 60
MREILHIQGGQCGNQIGAKFWEVVCAEHGID TGRY G++DLQLER+NVYYNEAS GRFV
Sbjct: 131 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGNNDLQLERVNVYYNEASCGRFV 310
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 311 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 490
Query: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 491 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 670
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFG 223
EPYNATLSVHQLVENADECM LDNEALYDICFRTLKLTTPSFG
Sbjct: 671 EPYNATLSVHQLVENADECMALDNEALYDICFRTLKLTTPSFG 799
Score = 333 bits (855), Expect(2) = 0.0
Identities = 164/188 (87%), Positives = 173/188 (91%), Gaps = 2/188 (1%)
Frame = +3
Query: 260 FPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMMCAADPRHGRYLTASAIFRG 319
FP L F G P SQQYRAL+VPE+TQQMWDSKNMMCAADPRHGRYLTASA+FRG
Sbjct: 909 FPSLAFLHGGICPTHFSWSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRG 1088
Query: 320 KMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 379
KMSTK+VDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR
Sbjct: 1089 KMSTKKVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFR 1268
Query: 380 RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEED--EYED 437
RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA+E+ +YED
Sbjct: 1269 RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEGYDYED 1448
Query: 438 EEEDYQQE 445
EEE+ Q+E
Sbjct: 1449 EEEEVQEE 1472
Score = 105 bits (261), Expect = 5e-23
Identities = 49/53 (92%), Positives = 51/53 (95%)
Frame = +1
Query: 225 LNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRG 277
LNHLISATMSGVTCCLRF GQLNSDLRKLAVNL+PFPR HFFM+GFAPLTSRG
Sbjct: 805 LNHLISATMSGVTCCLRFTGQLNSDLRKLAVNLIPFPRWHFFMVGFAPLTSRG 963
>TC85409 homologue to PIR|S20869|S20869 tubulin beta-2 chain - garden pea
(fragment), partial (68%)
Length = 1099
Score = 466 bits (1200), Expect = e-132
Identities = 230/249 (92%), Positives = 235/249 (94%)
Frame = +3
Query: 3 EILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFVPR 62
EILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRY G S+LQLERINVYYNEAS GRFVPR
Sbjct: 174 EILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYSGTSELQLERINVYYNEASCGRFVPR 353
Query: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
A+LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK
Sbjct: 354 AILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 533
Query: 123 EAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 182
EAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP
Sbjct: 534 EAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 713
Query: 183 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRF 242
YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATM V C + F
Sbjct: 714 YNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATM--VWCHMLF 887
Query: 243 PGQLNSDLR 251
++ LR
Sbjct: 888 EVPWSAKLR 914
Score = 163 bits (413), Expect = 1e-40
Identities = 75/77 (97%), Positives = 77/77 (99%)
Frame = +1
Query: 234 SGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQM 293
SGVTCCLRFPGQLNSDLRKLAVNL+PFPRLHFFMLGFAPLTSRGSQQYRALSVPE+TQQM
Sbjct: 868 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMLGFAPLTSRGSQQYRALSVPELTQQM 1047
Query: 294 WDSKNMMCAADPRHGRY 310
WDSKNMMCAADPRHGRY
Sbjct: 1048WDSKNMMCAADPRHGRY 1098
>TC85407 SP|P28551|TBB3_SOYBN Tubulin beta chain (Fragment). [Soybean]
{Glycine max}, partial (54%)
Length = 766
Score = 305 bits (781), Expect(2) = e-119
Identities = 144/154 (93%), Positives = 150/154 (96%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 60
MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y GDS+LQLERINVYYNEASGGR+V
Sbjct: 83 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYNGDSELQLERINVYYNEASGGRYV 262
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 263 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 442
Query: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISK 154
RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLIS+
Sbjct: 443 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISE 544
Score = 142 bits (358), Expect(2) = e-119
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +3
Query: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR
Sbjct: 543 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 722
Query: 214 TLKLTTPSFG 223
TLKL TP+FG
Sbjct: 723 TLKLATPTFG 752
>TC76676 homologue to SP|P20363|TBA3_ARATH Tubulin alpha-3/alpha-5 chain.
[Mouse-ear cress] {Arabidopsis thaliana}, partial (98%)
Length = 1656
Score = 395 bits (1015), Expect = e-110
Identities = 192/452 (42%), Positives = 287/452 (63%), Gaps = 10/452 (2%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQL--ERINVYYNEASGGR 58
MREI+ I GQ G Q+G WE+ C EHGI P G DS + + + N +++E G+
Sbjct: 72 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDSSVGVAHDAFNTFFSETGSGK 251
Query: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
VPRAV +DLEP +D VRSG Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 252 HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 431
Query: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
VRK A+N LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+++PSP+VS
Sbjct: 432 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 611
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 612 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 791
Query: 239 CLRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKN 298
LRF G +N D+ + NLVP+PR+HF + +AP+ S + LSVPEIT +++ +
Sbjct: 792 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 971
Query: 299 MMCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP 358
MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 972 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 1151
Query: 359 T--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
+ ++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 1152SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 1331
Query: 411 AESNMNDLVSEYQQYQDATAEEDEYEDEEEDY 442
A ++ L +Y++ AE+DE E EDY
Sbjct: 1332AREDLAALEKDYEEVGAEGAEDDE---EGEDY 1418
>TC76675 SP|P46259|TBA1_PEA Tubulin alpha-1 chain. [Garden pea] {Pisum
sativum}, partial (98%)
Length = 1660
Score = 389 bits (998), Expect = e-108
Identities = 188/452 (41%), Positives = 285/452 (62%), Gaps = 10/452 (2%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQL--ERINVYYNEASGGR 58
MRE + I GQ G Q+G WE+ C EHGI P G+ GD + + N +++E G+
Sbjct: 108 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 287
Query: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 288 HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 467
Query: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+N LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 468 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 647
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T
Sbjct: 648 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 827
Query: 239 CLRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKN 298
LRF G LN D+ + NLVP+PR+HF + +AP+ S + LSV EIT ++ +
Sbjct: 828 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 1007
Query: 299 MMCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPP 358
MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 1008MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 1187
Query: 359 T--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
T ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY GEGM++ EF+E
Sbjct: 1188TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEKGEFSE 1367
Query: 411 AESNMNDLVSEYQQYQDATAEEDEYEDEEEDY 442
A ++ L +Y++ + + D+ D +EDY
Sbjct: 1368AREDLAALEKDYEEVGAESGDGDDV-DGDEDY 1460
>TC76677 homologue to SP|P33629|TBA_PRUDU Tubulin alpha chain. [Almond
Prunus amygdalus] {Prunus dulcis}, partial (80%)
Length = 1392
Score = 289 bits (739), Expect(2) = 1e-80
Identities = 142/341 (41%), Positives = 215/341 (62%), Gaps = 8/341 (2%)
Frame = +1
Query: 109 GAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFS 168
G E++D LD +RK A+N LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+
Sbjct: 160 GKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFT 339
Query: 169 VFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHL 228
V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L
Sbjct: 340 VYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRL 519
Query: 229 ISATMSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPE 288
+S +S +T LRF G LN D+ + NLVP+PR+HF + +AP+ S + LSV E
Sbjct: 520 VSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAE 699
Query: 289 ITQQMWDSKNMMCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNN 348
IT ++ +MM DPRHG+Y+ ++RG + K+V+ + ++ K + FV+W P
Sbjct: 700 ITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTG 879
Query: 349 VKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG 400
K + PPT ++ A I NSTS+ E+F R+ +F M+ ++AF+HWY G
Sbjct: 880 FKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFGRIDHKFDLMYAKRAFVHWYVG 1059
Query: 401 EGMDEMEFTEAESNMNDLVSEYQQYQDATAEEDEYEDEEED 441
EGM+E EF+EA DL + + Y++ AE E DE+ D
Sbjct: 1060EGMEEGEFSEAR---EDLAALEKDYEEVGAESGEGGDEDMD 1173
Score = 29.6 bits (65), Expect(2) = 1e-80
Identities = 10/21 (47%), Positives = 15/21 (70%)
Frame = +2
Query: 87 PDNFVFGQSGAGNNWAKGHYT 107
P+ + G+ A NN+A+GHYT
Sbjct: 5 PEQLISGKEDAANNFARGHYT 67
>CA921757 homologue to SP|Q41784|TBB7 Tubulin beta-7 chain (Beta-7 tubulin).
[Maize] {Zea mays}, partial (34%)
Length = 743
Score = 287 bits (734), Expect = 7e-78
Identities = 137/147 (93%), Positives = 145/147 (98%)
Frame = -1
Query: 295 DSKNMMCAADPRHGRYLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVC 354
DSKNMMCAADPRHG YLTASA+FRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VC
Sbjct: 713 DSKNMMCAADPRHGPYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVC 534
Query: 355 DIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 414
DIPP GLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN
Sbjct: 533 DIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESN 354
Query: 415 MNDLVSEYQQYQDATAEEDEYEDEEED 441
MNDLV+EYQQYQDATA+E++YE+EEE+
Sbjct: 353 MNDLVAEYQQYQDATADEEDYEEEEEE 273
>AW689076 homologue to PIR|JA0048|JA0 tubulin beta-1 chain - soybean, partial
(33%)
Length = 468
Score = 272 bits (695), Expect = 2e-73
Identities = 124/142 (87%), Positives = 134/142 (94%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 60
MREILH+Q GQCGNQIG KFWEV+C EHGIDP+G YVG S LQLER+NVYYNEASGGR+V
Sbjct: 18 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDPSGSYVGKSHLQLERVNVYYNEASGGRYV 197
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDS+RSGP+G+IFRPDNFVFGQ+GAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 198 PRAVLMDLEPGTMDSLRSGPFGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVV 377
Query: 121 RKEAENSDCLQGFQVCHSLGGG 142
RKEA N DCLQGFQ+CHSLGGG
Sbjct: 378 RKEAXNCDCLQGFQICHSLGGG 443
>TC76674 homologue to GP|23452339|gb|AAN33000.1 alpha-tubulin 4 {Gossypium
hirsutum}, partial (90%)
Length = 970
Score = 271 bits (693), Expect = 4e-73
Identities = 127/274 (46%), Positives = 185/274 (67%), Gaps = 2/274 (0%)
Frame = +2
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQL--ERINVYYNEASGGR 58
MRE + + GQ G Q+G WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 131 MRECISVHIGQAGIQVGNACWELYCLEHGIGPDGQMPSDKTIGGGDDAFNTFFSETGAGK 310
Query: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 311 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 490
Query: 119 VVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+N LQGF V +++GGGTGSG+G+LL+ ++ +Y + L F+V+PSP+VS +
Sbjct: 491 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 670
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T
Sbjct: 671 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 850
Query: 239 CLRFPGQLNSDLRKLAVNLVPFPRLHFFMLGFAP 272
LRF G LN D+ + NLVP+PR+HF + +AP
Sbjct: 851 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 952
>TC90170 homologue to GP|12963226|gb|AAK11179.1 alpha-tubulin
{Colletotrichum lagenarium}, partial (56%)
Length = 809
Score = 241 bits (615), Expect = 4e-64
Identities = 118/253 (46%), Positives = 166/253 (64%), Gaps = 3/253 (1%)
Frame = +3
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLER---INVYYNEASGG 57
MRE++ I GQ G QI WE+ C EHGI P G Y+ + Q + + +++E G
Sbjct: 51 MREVISINVGQAGCQIANSCWELYCLEHGIQPDG-YLTEERKQADPDHGFSTFFSETGQG 227
Query: 58 RFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
++VPRA+ DLEP +D VR+GPY +F P++ + G+ A NN+A+GHYT G ELID VL
Sbjct: 228 KYVPRAIYCDLEPNVVDEVRTGPYRGLFHPEHMITGKEDASNNYARGHYTVGKELIDQVL 407
Query: 118 DVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
D VR+ A+N LQGF V HS GGGTGSG G LL+ ++ +Y + L F V+P+P+ +
Sbjct: 408 DKVRRVADNCVGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTAT 587
Query: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
+VVEPYN+ L+ H +E++D ++DNEA+YDIC R L L P++ +LN LI+ +S +T
Sbjct: 588 SVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSIT 767
Query: 238 CCLRFPGQLNSDL 250
LRF G LN DL
Sbjct: 768 ASLRFDGSLNVDL 806
>AL369498 homologue to GP|4079637|emb beta-tubulin {Tetrahymena pyriformis},
partial (27%)
Length = 517
Score = 221 bits (564), Expect = 3e-58
Identities = 106/117 (90%), Positives = 112/117 (95%)
Frame = +3
Query: 323 TKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVS 382
TKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDIPP GLKMA TFIGNST+IQE+F+RVS
Sbjct: 3 TKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAVTFIGNSTAIQELFKRVS 182
Query: 383 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEDEYEDEE 439
EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQDATAEED DEE
Sbjct: 183 EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQDATAEEDGEFDEE 353
>BG644366 GP|17402471|em alpha-tubulin {Nicotiana tabacum}, partial (47%)
Length = 646
Score = 210 bits (535), Expect = 8e-55
Identities = 98/207 (47%), Positives = 145/207 (69%)
Frame = +1
Query: 44 LERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAK 103
L N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+
Sbjct: 25 LTAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFAR 204
Query: 104 GHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM 163
GHYT G E++D LD +RK A+N LQGF V +++GGGTGSG+G+LL+ ++ +Y +
Sbjct: 205 GHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKS 384
Query: 164 MLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFG 223
L F+++PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++
Sbjct: 385 KLGFTIYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPTYT 564
Query: 224 DLNHLISATMSGVTCCLRFPGQLNSDL 250
+LN LIS +S +T LRF G + D+
Sbjct: 565 NLNRLISQVISSLTASLRFDGAPDVDV 645
>AL369497 homologue to SP|O04386|TBB_ Tubulin beta chain. {Chlamydomonas
incerta}, partial (24%)
Length = 414
Score = 210 bits (535), Expect = 8e-55
Identities = 94/107 (87%), Positives = 103/107 (95%)
Frame = +1
Query: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYVGDSDLQLERINVYYNEASGGRFV 60
MREI+HIQGGQCGNQIGAKFWEV+ EHG+DPTG Y GDSDLQLERINVY+NEA+GGR+V
Sbjct: 94 MREIVHIQGGQCGNQIGAKFWEVISDEHGVDPTGTYHGDSDLQLERINVYFNEATGGRYV 273
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYT 107
PRAVLMDLEPGTMDSVR+GPYGQ+FRPDNFVFGQ+GAGNNWAKGHYT
Sbjct: 274 PRAVLMDLEPGTMDSVRAGPYGQLFRPDNFVFGQTGAGNNWAKGHYT 414
>TC92572 similar to SP|Q9ZRB0|TBB3_WHEAT Tubulin beta-3 chain (Beta-3
tubulin). [Wheat] {Triticum aestivum}, partial (25%)
Length = 720
Score = 198 bits (504), Expect = 3e-51
Identities = 93/110 (84%), Positives = 101/110 (91%)
Frame = +1
Query: 332 NVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRR 391
NVQNKNSSYFVEWIPNNVKS+VCDIPPTGL M+STF+GNSTSIQEMFRRVSEQFT MF+R
Sbjct: 1 NVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKR 180
Query: 392 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEDEYEDEEED 441
KAFLHWYT EGMDEMEFTEAESNMNDLVSEYQQYQDA E+ DE+++
Sbjct: 181 KAFLHWYTAEGMDEMEFTEAESNMNDLVSEYQQYQDAAGVEEGESDEDDE 330
>TC91984 homologue to GP|16611919|gb|AAL27406.1 alpha-tubulin {Artemia
franciscana}, partial (55%)
Length = 755
Score = 187 bits (474), Expect = 9e-48
Identities = 88/243 (36%), Positives = 144/243 (59%), Gaps = 8/243 (3%)
Frame = +1
Query: 190 HQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSD 249
H +E++D ++DNE +YDIC R L + P++ +LN LI+ +S +T LRF G LN D
Sbjct: 4 HTTLEHSDCAFMVDNEGVYDICRRNLDIERPTYTNLNRLIAQVVSSITASLRFDGSLNVD 183
Query: 250 LRKLAVNLVPFPRLHFFMLGFAPLTSRGSQQYRALSVPEITQQMWDSKNMMCAADPRHGR 309
L + NLVP+PR+HF ++ +AP+ S + L+V EIT ++ N M DPRHG+
Sbjct: 184 LTEFRTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVAEITYSCFEPNNQMVKCDPRHGK 363
Query: 310 YLTASAIFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPT--------GL 361
Y+ ++RG + K+V+ + ++ K + FV+W P K + PPT +
Sbjct: 364 YMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKV 543
Query: 362 KMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 421
+ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +
Sbjct: 544 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 723
Query: 422 YQQ 424
Y++
Sbjct: 724 YEE 732
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,739,942
Number of Sequences: 36976
Number of extensions: 161648
Number of successful extensions: 1130
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of query: 449
length of database: 9,014,727
effective HSP length: 99
effective length of query: 350
effective length of database: 5,354,103
effective search space: 1873936050
effective search space used: 1873936050
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC144474.3