BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144459.6 - phase: 0
(1105 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like... 221 2e-63
BG451959 homologue to GP|6175165|gb| Mutator-like transposase {A... 112 6e-25
BI271388 similar to GP|10177186|db mutator-like transposase-like... 87 5e-17
CB891859 similar to GP|6175165|gb| Mutator-like transposase {Ara... 75 2e-13
AL375902 similar to GP|9759134|dbj mutator-like transposase-like... 72 1e-12
BF646328 similar to PIR|F84533|F845 Mutator-like transposase [im... 56 6e-12
AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~... 42 0.001
AL375901 similar to GP|9759134|dbj mutator-like transposase-like... 40 0.007
TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreu... 38 0.019
BG586394 similar to GP|7295463|gb| CG4835 gene product {Drosophi... 37 0.032
BE941303 36 0.094
BQ124307 35 0.21
TC85072 similar to GP|18087573|gb|AAL58917.1 AT5g63950/MBM17_5 {... 33 0.61
TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-... 33 0.61
TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone d... 33 0.80
TC77441 similar to GP|21592359|gb|AAM64310.1 unknown {Arabidopsi... 32 1.0
TC79086 similar to GP|23499033|emb|CAD51113. ubiquitin-protein l... 32 1.4
TC85930 similar to GP|17065398|gb|AAL32853.1 Unknown protein {Ar... 32 1.8
TC80287 weakly similar to GP|12667516|gb|AAG61157.1 DBC2 {Homo s... 31 2.3
BE319199 similar to PIR|JC4867|JC4 ribonuclease non-S (EC 3.1.-.... 31 3.0
>TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like
transposase {Arabidopsis thaliana}, partial (57%)
Length = 2129
Score = 221 bits (562), Expect(2) = 2e-63
Identities = 149/518 (28%), Positives = 253/518 (48%), Gaps = 9/518 (1%)
Frame = +1
Query: 251 PQLNKDFKFKIGMEFNTLVEFKEAIIEWNVLNGYQIKMPKNESYRVRVECRDQ-CGYKVL 309
P +D F +G EF + F+ AI E + +++++ K++ R +C + C +++
Sbjct: 151 PDCMEDHNFVVGQEFPDVKAFRNAIKEAAIAQHFELRIIKSDLIRYFAKCASEGCPWRIR 330
Query: 310 CSKVGDRRTFQIKTLEGPHTCAPVLEN--KSANSRWVAKKVVPKMQVTKKMSVQEVFNEM 367
K+ + TF I++LEG HTC N A+ W+ + +++ +++ +++
Sbjct: 331 AVKLPNASTFTIRSLEGTHTCGRNALNGHHQASVDWIVSFIEERLRDNINYKPKDILHDI 510
Query: 368 AVNYGVGITMDRAWRARKIAKSIIEGDADKQYAMIRRYAAELKRVCRDNNVKINVAGPSA 427
YG+ I +AWRA++ + I G +++ + ++ + E+K+ + K+ G +
Sbjct: 511 HKQYGITIPYKQAWRAKERGLAAIYGSSEEGFYLLPSFCEEIKKTNPGSVAKVFTTGADS 690
Query: 428 TIQPRFGSFYFCFDGCKKGFISACRPFVGVDGCHLKTRYGGQLLIAVGRDPNDQYFPLAF 487
Q F SFY G F++ C P V + G LK++Y L A D + FPLAF
Sbjct: 691 RFQRLFISFYASIHG----FVNGCLPIVALGGIQLKSKYLSTFLSATSFDADGGLFPLAF 858
Query: 488 GVVETECKESWKWFIQLLMEDIGQD----KRYVFISDQQKGLLSVFDEMFDTIDHRLCLR 543
VV+ E ESW WF+ L + + + +F+SD QKG++ F H C+R
Sbjct: 859 AVVDVENDESWTWFLSELHNALEVNTECMPQIIFLSDGQKGIVDAIRRKFPRSSHAFCMR 1038
Query: 544 HLYANFKKKFGGGSQIRDLMMGAAKATYYQGWLEKMNELKKIDLGAWEWLMAVEPKKWCK 603
HL N K+F S++ L+ AA AT + EKM E++++ A WL P +W
Sbjct: 1039HLSENIGKEF-KNSRLIHLLWSAAYATTINAFREKMAEIEEVSPNASMWLQHFHPSQW-- 1209
Query: 604 HALPFY--SKCDVLMNXISESLNATILSARDQPIISMAEWIRHYLMRRMTTSATKLQKWQ 661
AL ++ ++ L + I E N IL A++ PII + E I+ L K W
Sbjct: 1210-ALVYFEGTRYGHLSSNI-EEFNKWILEAQELPIIQVIERIQSKLKTEFDDRRLKSSSWC 1383
Query: 662 HNVMPMPRKRLDKEITLAAHWRSTWSGIGEQFQVMHTYNRQQFIVDIAKRSCSCNFWEIV 721
+ P +R+ + I A+ ++ S E F+V+ + IV+I SCSC W++
Sbjct: 1384SVLTPSSERRMVEAINRASTYQVLKSDEVE-FEVISA--DRSDIVNIGSHSCSCRDWQLY 1554
Query: 722 GIPCRHAVSALGKRKQRPEMFVDDYYSRTKYALCYSFA 759
GIPC HAV+AL ++ D Y+ T A C++ A
Sbjct: 1555GIPCSHAVAALISSRK-------DVYAYT--AKCFTVA 1641
Score = 41.2 bits (95), Expect(2) = 2e-63
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 779 PPNYKNGPGRPRKLRIREFDENGSRMRRQGVAYRCTKCDQFGHNQRRCKSDV 830
PP ++ PGRP K RI D N R C++C+Q GH + CK+++
Sbjct: 1746 PPKFRRPPGRPEKKRICVEDHN-----RDKHTVHCSRCNQTGHYKTTCKAEM 1886
>BG451959 homologue to GP|6175165|gb| Mutator-like transposase {Arabidopsis
thaliana}, partial (28%)
Length = 658
Score = 112 bits (281), Expect = 6e-25
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Frame = +2
Query: 361 QEVFNEMAVNYGVGITMDRAWRARKIAKSIIEGDADKQYAMIRRYAAELKRVCRDNNVKI 420
+E+ E+ +G+ ++ +AWR ++ + + G ++ Y ++ +Y A +KR ++
Sbjct: 83 KEILEEIHRVHGITLSYKQAWRGKEHIMAAMRGSFEEGYRLLPQYCAHVKRT-NPGSIAS 259
Query: 421 NVAGPSATIQPRFGSFYFCFDGCKKGFISACRPFVGVDGCHLKTRYGGQLLIAVGRDPND 480
PS F + F G ++ACRP +G+D +LK++Y G LL+A G D +
Sbjct: 260 VYGNPSDNC---FQRLFISFQASIYGLLNACRPLLGLDRIYLKSKYLGTLLLATGFDGDG 430
Query: 481 QYFPLAFGVVETECKESWKWFI----QLLMEDIGQDKRYVFISDQQKGLLSVFDEMFDTI 536
FPLAFGVV+ E ++W WF+ LL + R +SD+Q+G++ + F T
Sbjct: 431 ALFPLAFGVVDEENDDNWMWFLSKLHNLLEINTENMPRLTILSDRQQGIVDGVEANFPTA 610
Query: 537 DHRLCLRHLYANFKK 551
H C+RHL NF+K
Sbjct: 611 FHGFCMRHLSDNFRK 655
>BI271388 similar to GP|10177186|db mutator-like transposase-like protein
{Arabidopsis thaliana}, partial (26%)
Length = 711
Score = 86.7 bits (213), Expect = 5e-17
Identities = 47/196 (23%), Positives = 102/196 (51%), Gaps = 3/196 (1%)
Frame = +2
Query: 218 DEEIDGDYLSEELGSSDPDDSNDDTIKYDQFRMPQLNKDFKFKIGMEFNTLVEFKEAIIE 277
+++++ D +E S +NDD + R Q ++ + FN+ EF+EA+ +
Sbjct: 20 EDQVEVDVANEAPAQSLCSGANDDKRQ----RAAQQWENTITGVDQRFNSFSEFREALHK 187
Query: 278 WNVLNGYQIKMPKNESYRVRVECRDQ-CGYKVLCSKVGDRRTFQIKTLEGPHTC--APVL 334
+++ +G+ + KN+S+RV V+C+ Q C +++ SK+ + IK + HTC + V
Sbjct: 188 YSIAHGFAYRYKKNDSHRVTVKCKSQGCPWRIYASKLSTTQLICIKKMTRDHTCEGSAVK 367
Query: 335 ENKSANSRWVAKKVVPKMQVTKKMSVQEVFNEMAVNYGVGITMDRAWRARKIAKSIIEGD 394
A WV + K++ + +++ +++ YG+ + +AWRA++IA+ ++G
Sbjct: 368 AGYRATRGWVGNIIKEKLKASPNYRPKDIADDIKREYGIQLNYSQAWRAKEIAREQLQGS 547
Query: 395 ADKQYAMIRRYAAELK 410
+ Y + + ++K
Sbjct: 548 YKEAYTQLPFFCEKIK 595
>CB891859 similar to GP|6175165|gb| Mutator-like transposase {Arabidopsis
thaliana}, partial (27%)
Length = 625
Score = 74.7 bits (182), Expect = 2e-13
Identities = 55/202 (27%), Positives = 91/202 (44%)
Frame = +1
Query: 514 RYVFISDQQKGLLSVFDEMFDTIDHRLCLRHLYANFKKKFGGGSQIRDLMMGAAKATYYQ 573
R +SD+Q+G++ + F T H C+RHL +F+K+F + + +L+ AA
Sbjct: 31 RLTILSDRQQGIVDGVEANFPTAFHGFCMRHLSDSFRKEF-NNTMLVNLLWEAANCLTII 207
Query: 574 GWLEKMNELKKIDLGAWEWLMAVEPKKWCKHALPFYSKCDVLMNXISESLNATILSARDQ 633
+ K+ E+++I A W+ V P+ W + + N I E+LN+ IL A
Sbjct: 208 EFEGKVMEIEEISQDAAYWIRRVPPRLWATAYFEGHRFGHLTAN-IVEALNSWILEASGL 384
Query: 634 PIISMAEWIRHYLMRRMTTSATKLQKWQHNVMPMPRKRLDKEITLAAHWRSTWSGIGEQF 693
PII M E IR LM +W ++P + + + + A ++ + E
Sbjct: 385 PIIQMMECIRRQLMTWFNERRETSMQWTSILVPSAERSVAEALERARTYQVLRANEAEFE 564
Query: 694 QVMHTYNRQQFIVDIAKRSCSC 715
+ H IVDI R C C
Sbjct: 565 VISHEGTN---IVDIRNRCCLC 621
>AL375902 similar to GP|9759134|dbj mutator-like transposase-like protein
{Arabidopsis thaliana}, partial (20%)
Length = 542
Score = 72.0 bits (175), Expect = 1e-12
Identities = 42/127 (33%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Frame = +2
Query: 711 RSCSCNFWEIVGIPCRHAVSALGKRKQRPEMFVDDYYSRTKYALCYSFAISPINGMDMWP 770
R CSC W++ G PC HA +AL MF + ++ Y + YS I PI W
Sbjct: 8 RECSCRRWQLYGYPCAHAAAALISCGHNAHMFAEPCFTVQSYRMAYSQMIYPIPDKSQWR 187
Query: 771 E-VEAPE----------LLPPNYKNGPGRPRKLRIREFDENGSRMRRQGVAYRCTKCDQF 819
E E E + PP + PGRP+K +R EN R +R +C +C
Sbjct: 188 EHGEGAEGGGGARVDIVIHPPKIRRPPGRPKKKVLRV--ENFKRPKR---VVQCGRCHML 352
Query: 820 GHNQRRC 826
GH+Q++C
Sbjct: 353 GHSQKKC 373
>BF646328 similar to PIR|F84533|F845 Mutator-like transposase [imported] -
Arabidopsis thaliana, partial (3%)
Length = 636
Score = 55.8 bits (133), Expect(2) = 6e-12
Identities = 22/66 (33%), Positives = 35/66 (52%)
Frame = -1
Query: 682 WRSTWSGIGEQFQVMHTYNRQQFIVDIAKRSCSCNFWEIVGIPCRHAVSALGKRKQRPEM 741
W++TW G E + ++IV++A+R+C+C W + GIPC H + + E
Sbjct: 477 WKATWHGDMEMNNFNVSNETNKYIVNLAQRTCACRKWNLTGIPCAHVIPCIWHNGLADEN 298
Query: 742 FVDDYY 747
FV YY
Sbjct: 297 FVSSYY 280
Score = 33.9 bits (76), Expect(2) = 6e-12
Identities = 15/44 (34%), Positives = 22/44 (49%)
Frame = -3
Query: 756 YSFAISPINGMDMWPEVEAPELLPPNYKNGPGRPRKLRIREFDE 799
YS + P +G +WP + P + GRP+KLR + DE
Sbjct: 169 YSHIVLPSSGPKLWPVTNTEHINPLAKRRSAGRPKKLRKKANDE 38
>AW687028 weakly similar to GP|9909176|dbj| hypothetical protein~similar to
Arabidopsis thaliana F20D10.300, partial (11%)
Length = 662
Score = 42.0 bits (97), Expect = 0.001
Identities = 23/91 (25%), Positives = 39/91 (42%)
Frame = +1
Query: 458 DGCHLKTRYGGQLLIAVGRDPNDQYFPLAFGVVETECKESWKWFIQLLMEDIGQDKRYVF 517
D + K +Y L I G + + Q ++E E ES+KW + +E +
Sbjct: 16 DTTYKKNKYNYPLCIFSGCNHHSQTIIFGVALLEDETIESYKWVLNRFLECMENKFPKAV 195
Query: 518 ISDQQKGLLSVFDEMFDTIDHRLCLRHLYAN 548
++D + ++F HRLC HL+ N
Sbjct: 196 VTDGDGSMREAIKQVFPDASHRLCAWHLHKN 288
>AL375901 similar to GP|9759134|dbj mutator-like transposase-like protein
{Arabidopsis thaliana}, partial (27%)
Length = 493
Score = 39.7 bits (91), Expect = 0.007
Identities = 29/146 (19%), Positives = 59/146 (39%), Gaps = 2/146 (1%)
Frame = +3
Query: 533 FDTIDHRLCLRHLYANFKKKFGGGSQIRDLMMGAAKATYYQGWLEKMNELKKIDLGAWEW 592
F + H CLR++ NF+ F +++ ++ A A + K+ E+ ++ W
Sbjct: 9 FPSASHGFCLRYVSENFRDTF-KNTKLVNIFWNAVYALTAAEFESKITEMIEVSQDVISW 185
Query: 593 LMAVEPKKWCKHALPFYS--KCDVLMNXISESLNATILSARDQPIISMAEWIRHYLMRRM 650
P W A+ ++ + ++E L L + P++ M E+IR +
Sbjct: 186 FQHFPPFLW---AVAYFDGVRYGHFTLGVTELLYNWALECHELPVVQMMEYIRQQMTSWF 356
Query: 651 TTSATKLQKWQHNVMPMPRKRLDKEI 676
+W ++P KR+ + I
Sbjct: 357 NDRREVGMEWTSILVPSAEKRISEAI 434
>TC85918 similar to GP|13562014|gb|AAK30610.1 fibroin 1 {Plectreurys tristis},
partial (8%)
Length = 4117
Score = 38.1 bits (87), Expect = 0.019
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Frame = -1
Query: 851 ATEPMQTDPMQAEV----AAATEPMQAEVEAGTEPMQTEPIQTDPMQAEVAAGTKPMQAE 906
ATE ++ +P+ EV EP+ EVEA TE ++ EP T+ ++A +P+ E
Sbjct: 2179 ATETVKEEPVATEVEPTETVKEEPVATEVEA-TETVKDEPAATE-VEATETVKEEPVATE 2006
Query: 907 VEA----GTEPMQPEVEA---------GTQPMHTASTQDPPRHT----TKIVKVKNSEAP 949
EA EP+ EVEA T+ T + ++ P T T++VK + +
Sbjct: 2005 TEATETVKEEPVATEVEATETVKEESVATEVEATETVKEEPVTTVVEPTEMVKDEPAATE 1826
Query: 950 FKIQKVVTSE 959
F+ + V E
Sbjct: 1825 FEATETVKDE 1796
Score = 35.8 bits (81), Expect = 0.094
Identities = 45/163 (27%), Positives = 65/163 (39%), Gaps = 29/163 (17%)
Frame = -1
Query: 852 TEPMQTDPMQAEVAAA----TEPMQAEVEA---------GTEPMQTEPIQTDPMQAEV-- 896
TE ++ +PM EVA A EP+ EVEA TE TE ++ +P EV
Sbjct: 2446 TETVKEEPMVTEVATAEIVKEEPVVTEVEATETLKEELVATEVEATETVKEEPAATEVKV 2267
Query: 897 --AAGTKPMQAEVE----AGTEPMQPEVEA-GTQPMHTASTQDPPRHTTKIVKVKNS-EA 948
+P+ EV+ EP+ E EA T +T+ P T K V EA
Sbjct: 2266 TETVKDEPVVTEVDPTETVKEEPLATEAEATETVKEEPVATEVEPTETVKEEPVATEVEA 2087
Query: 949 PFKIQ------KVVTSEAANALPEKIVTEFYEALPESQLETSL 985
++ +V +E P TE E + E + T +
Sbjct: 2086 TETVKDEPAATEVEATETVKEEPVATETEATETVKEEPVATEV 1958
Score = 32.0 bits (71), Expect = 1.4
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Frame = -1
Query: 851 ATEPMQTDPMQAEVAAAT----EPMQAEVEAGTEPMQTEPIQTDPMQAEVAAGTKPMQAE 906
ATE ++ +P+ E A EP+ EVEA TE ++ E + T+ ++A +P+
Sbjct: 2044 ATETVKEEPVATETEATETVKEEPVATEVEA-TETVKEESVATE-VEATETVKEEPVTTV 1871
Query: 907 VEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKVKNSEAPFKIQKVVTSEAANALPE 966
VE TE ++ E A T+ T + +D T + +V +E + E + E
Sbjct: 1870 VEP-TEMVKDE-PAATEFEATETVKD----ETIVTEVDPTETVKEEAVATEVEITKTVKE 1709
Query: 967 KIVTE 971
+VTE
Sbjct: 1708 PLVTE 1694
Score = 32.0 bits (71), Expect = 1.4
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Frame = -1
Query: 827 KSDVQNPEAAKRKRKTPRRKNTS-TAT-EPMQTDPMQAEVA-AATEPMQAEVEAGTEPMQ 883
+ + + PEA+ + + R +N + TAT E +T+ E++ A EP++ + + E +
Sbjct: 817 EDEKKEPEASDAVQVSSREQNEAKTATIEAGETETKVEEISKAVNEPVRETLASKFEKDE 638
Query: 884 TEPIQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKV 943
E IQ E +P++ EVE+ T+ + P T + + I KV
Sbjct: 637 EETIQNGVDNLEKERIEEPVKTEVES-TKENDTTTISKDLPKETPAKPAQKQSNNIIAKV 461
Query: 944 KNSEAPFKIQKVVTSEAANA 963
K S K +K +T ++ ++
Sbjct: 460 KQSLV--KAKKAITGKSPSS 407
>BG586394 similar to GP|7295463|gb| CG4835 gene product {Drosophila
melanogaster}, partial (2%)
Length = 734
Score = 37.4 bits (85), Expect = 0.032
Identities = 37/149 (24%), Positives = 57/149 (37%), Gaps = 5/149 (3%)
Frame = +1
Query: 842 TPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQTDPMQAEVAAGTK 901
TP + T + + ++ TE + E +E E T+P+ + T
Sbjct: 64 TPTKSETDVPETTTTIEKSKNDLGTTTES-ETETPTKSETNVPETTTTEPIVQTDSEETP 240
Query: 902 PMQAEVEAGTEPMQPEVEAGTQP---MHTASTQDPPRHTTKIVKVKNSEAPFKIQKVVTS 958
+ E E T+ +PE E T+P T S D P TT + K +N T+
Sbjct: 241 TEKPEKETTTKTTKPEAETTTEPETNTPTKSETDVPETTTTLEKNQNVPGS-------TT 399
Query: 959 EAANALPEKIVTE--FYEALPESQLETSL 985
E+ P K TE E P + ET +
Sbjct: 400 ESETETPTKSETETTTTEETPTEKPETDI 486
Score = 32.3 bits (72), Expect = 1.0
Identities = 33/122 (27%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Frame = +1
Query: 848 TSTATEPMQTDPMQAEVAAATEPMQAEVEAGT-EPMQTEPIQTDPMQAEVAAG------T 900
T+T E Q P + P ++E E T E TE +TD + A+ T
Sbjct: 352 TTTTLEKNQNVPGSTTESETETPTKSETETTTTEETPTEKPETDIPKTTTASEKNKTTTT 531
Query: 901 KPMQAEVEAGTEPMQPEVEAGTQPMHTASTQDPPRHTTKIVKVKNSEAPFKIQKVVTSEA 960
+P V T +PE E T P A+TQ P T KN + T+
Sbjct: 532 EPTVPTVSEETPTEKPEKETTTTPETEATTQ-PETDNTPTNPEKNKATTTPETETTTASE 708
Query: 961 AN 962
N
Sbjct: 709 TN 714
>BE941303
Length = 631
Score = 35.8 bits (81), Expect = 0.094
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -3
Query: 766 MDMWPEV-EAPELLPPNYKNGPGRPRKLRIREFDENGSRMRRQGVAYRCTKCD 817
MDMW +V + E++PP YK G RKL + ++ GVA+R CD
Sbjct: 617 MDMWLKVNDHEEIIPPLYKKGLSNLRKLELGNMMITD*GLKWPGVAHRRINCD 459
>BQ124307
Length = 762
Score = 34.7 bits (78), Expect = 0.21
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 828 SDVQNPEA-AKRKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEP 886
SD + E+ A+ ++ P+ T T TEP+Q P + TEP+Q + E
Sbjct: 438 SDSEKDESDAQTEQVLPQPNPTDTQTEPVQVLPQENR---QTEPVQV--------LPQEN 584
Query: 887 IQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGTQP 924
QT+P+Q + T+ QAE+E +PE E P
Sbjct: 585 PQTEPVQVLLRENTQNEQAEMEQLL--FEPESELELNP 692
>TC85072 similar to GP|18087573|gb|AAL58917.1 AT5g63950/MBM17_5 {Arabidopsis
thaliana}, partial (1%)
Length = 724
Score = 33.1 bits (74), Expect = 0.61
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +3
Query: 169 VTVNNKTLRIKKCGSKTPKKKSPKKNNSGRMNVIAPVSLLKNGKGKYVVDEEIDGDYLSE 228
++ +NKT R +K+ KK P+ N + +S K + D+E+D
Sbjct: 162 ISFSNKTQRSSMAANKSVKK--PQSLNDSHYRFLQDLSAPPKPSSKSI-DDELDTPIQPR 332
Query: 229 ELGSSDPDDSNDDTI 243
L D DD +DDTI
Sbjct: 333 NLVYQDVDDDDDDTI 377
>TC87847 similar to GP|15929245|gb|AAH15068.1 Similar to adaptor-related
protein complex AP-3 beta 1 subunit {Mus musculus},
partial (2%)
Length = 931
Score = 33.1 bits (74), Expect = 0.61
Identities = 27/152 (17%), Positives = 60/152 (38%)
Frame = +1
Query: 788 RPRKLRIREFDENGSRMRRQGVAYRCTKCDQFGHNQRRCKSDVQNPEAAKRKRKTPRRKN 847
+P + E DE+ S +G ++ G + + + + K P KN
Sbjct: 148 KPADKVVNEQDEDSSSEEEEGD-------EEDGSSSEDEEEEDNQTQQTPSKDSKPASKN 306
Query: 848 TSTATEPMQTDPMQAEVAAATEPMQAEVEAGTEPMQTEPIQTDPMQAEVAAGTKPMQAEV 907
+T P ++E + + ++ E+ +EP P +KPM+ +
Sbjct: 307 PPPSTPISNPKPAESE-SGSESGSESGTESDSEPEHKSEPTPPPNPKVKPLASKPMKTQT 483
Query: 908 EAGTEPMQPEVEAGTQPMHTASTQDPPRHTTK 939
+A + +++GT+ + +ST + + + K
Sbjct: 484 QAQAQSTPVPIKSGTKRVAESSTGNDSKRSKK 579
>TC77681 similar to GP|22597156|gb|AAN03465.1 nucleolar histone deacetylase
HD2-P39 {Glycine max}, partial (47%)
Length = 1233
Score = 32.7 bits (73), Expect = 0.80
Identities = 42/187 (22%), Positives = 79/187 (41%), Gaps = 16/187 (8%)
Frame = +2
Query: 77 HINEEVSGYSVANKVDAHIFV------EHNVLDISVKVDVPRFFDLDVGYDEE-DVMVST 129
HI++ G + +K + + + + VL K +P+ LD+ ++E ++ ++
Sbjct: 146 HISQVALGEAKKDKPNESVVIYLKVGEQKLVLGTLTKDKIPQI-SLDIVLEKEFELSHNS 322
Query: 130 DDDSGKFVGF-------DDSEDERTTALEDGFEDVEVEAPTNGTNRVTVNNKTLRIKKCG 182
S F G+ DDSE+E T ED ED+ + T + + L++ +
Sbjct: 323 KAASVHFCGYKAYYEDNDDSEEEGETDSED--EDIPL-ITTEQNGKPEPKAEELKVSEPK 493
Query: 183 SKTPKKKSPKKN--NSGRMNVIAPVSLLKNGKGKYVVDEEIDGDYLSEELGSSDPDDSND 240
K +P KN + + V+ P ++ D D +E+GSSD + N
Sbjct: 494 KADAKNAAPAKNAATAKHVKVVDPKD-----------EDSDDDDESDDEIGSSDDEMENA 640
Query: 241 DTIKYDQ 247
D+ D+
Sbjct: 641 DSDSEDE 661
Score = 32.0 bits (71), Expect = 1.4
Identities = 31/108 (28%), Positives = 46/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 106 VKVDVPRFFDLDVGYDEEDVMVSTDDDSGKFVGFDDSEDERTTALEDGFEDVEVEAPTNG 165
VKV P+ D D + +D + S+DD+ DSEDE +D ED E E P
Sbjct: 548 VKVVDPKDEDSDDDDESDDEIGSSDDEMEN--ADSDSEDE-----DDSDEDDEEETPVKK 706
Query: 166 TNRVTVN-NKTLRIKKCGSKTPKKKSPKKNNSGRMNVIAPVSLLKNGK 212
++ N++ SK K +P+K + + A K GK
Sbjct: 707 VDQGKKRPNESASKTPISSKKSKNATPEKTDGKKAGHTATPHPKKGGK 850
>TC77441 similar to GP|21592359|gb|AAM64310.1 unknown {Arabidopsis
thaliana}, partial (98%)
Length = 1046
Score = 32.3 bits (72), Expect = 1.0
Identities = 22/67 (32%), Positives = 35/67 (51%)
Frame = +3
Query: 94 HIFVEHNVLDISVKVDVPRFFDLDVGYDEEDVMVSTDDDSGKFVGFDDSEDERTTALEDG 153
H+F+E DI + +PR D D + DV V++DD+S DD +++ T AL
Sbjct: 354 HLFLEGTKRDIEDNI-IPRSVDAD----DSDVEVNSDDESD-----DDDDEDDTEALLAE 503
Query: 154 FEDVEVE 160
E ++ E
Sbjct: 504 LEQIKKE 524
>TC79086 similar to GP|23499033|emb|CAD51113. ubiquitin-protein ligase 1
putative {Plasmodium falciparum 3D7}, partial (0%)
Length = 1418
Score = 32.0 bits (71), Expect = 1.4
Identities = 56/308 (18%), Positives = 105/308 (33%), Gaps = 41/308 (13%)
Frame = +2
Query: 815 KCDQFGHNQRRCKSDVQNPEAAKRKRKTPRRKNTSTATEPMQTDPMQAEVAAATEPMQAE 874
K +Q N S+ + + + + T P +T+P V E
Sbjct: 104 KIEQHDENDEETSSEAGSSSEGGEEEEESSEEEAPKTTPPPKTNPKNNSVEDEDEE---- 271
Query: 875 VEAGTEPMQTEPIQTDPMQAEVAAGTKPMQAEVEAGTEPMQPEVEAGT-QPMHTAST-QD 932
+TD + E TKP++ +++GT+P +GT +P T Q
Sbjct: 272 -------------ETDTDEDEPPPKTKPIEQTLKSGTKPSIAPARSGTKRPAENNDTKQS 412
Query: 933 PPRHTTKIVKVKNSEAP----------FKIQKVVTSEAANAL--------------PEKI 968
+ TT+ K + P Q+V T + A+ P K
Sbjct: 413 NKKKTTEEKNKKKEKEPEEDDNSNNKKASFQRVFTEDDEVAILQGLVDFTAKSGNDPTKH 592
Query: 969 VTEFYEALPES---------------QLETSLGPDVFDDLDDSVLAAITDQMFEAAEKEF 1013
++ FY+ + +S +L + + + + MFE ++K +
Sbjct: 593 LSAFYQIVKKSVHFKVTLDQLRDKVRRLRLKYENKIKSKKTPTFSKPVEETMFELSKKIW 772
Query: 1014 NVVNVVKSRNEQKKKTLGLKKSVKAGRKSSRLMKLKTKAIKGAGSSMDQPMVLDESEEGT 1073
V + E+ +K G + K + + K + D P+V+ + + G
Sbjct: 773 GGGKVDVNEGEENEKVNGKPAKKELAVKKAAAARTTKKLV----MEPDSPLVVLKVDSGN 940
Query: 1074 LTQEDHGL 1081
+ED GL
Sbjct: 941 -GKEDTGL 961
>TC85930 similar to GP|17065398|gb|AAL32853.1 Unknown protein {Arabidopsis
thaliana}, partial (62%)
Length = 1234
Score = 31.6 bits (70), Expect = 1.8
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -3
Query: 637 SMAEWIRHYLMRRMTTSATKLQKWQ---HNVMPMPRKRLDKEITLAAHWRSTWSGIGEQF 693
S+ WI H+ R +S + +W N + P R HW S + F
Sbjct: 818 SIHVWIMHHETR--ISSLLCILRWHIAIRNSISRPSNR---------HWSSWYRCKHFIF 672
Query: 694 QVMHTYNRQQFIVDIAKRSCSCNFWEIVGIP 724
QV+ +N Q I DI+ C CN + G P
Sbjct: 671 QVLPRHNVNQEIKDISSCDCCCNVILLKGSP 579
>TC80287 weakly similar to GP|12667516|gb|AAG61157.1 DBC2 {Homo sapiens},
partial (4%)
Length = 779
Score = 31.2 bits (69), Expect = 2.3
Identities = 33/101 (32%), Positives = 49/101 (47%), Gaps = 3/101 (2%)
Frame = -3
Query: 118 VGYDEEDVMVSTDDDSGKFVGFDDSEDERTTALEDGFEDVEVE-APTNGTNRVTVNNKTL 176
VGY EE V DDD DD E E +DG +D++ E P + N++
Sbjct: 462 VGYSEEQVNHDDDDD-------DDDESE-----DDGDDDLDDELVPWDIGNKL----GRQ 331
Query: 177 RIKKCGSKTPKKKSPKKNNSGRMNVIAPVSLLKNG--KGKY 215
R++K G K+ S K NNS R +P+ ++ G +GK+
Sbjct: 330 RMRKLG----KRVSSKMNNSKR----SPILFVRPGCVRGKH 232
>BE319199 similar to PIR|JC4867|JC4 ribonuclease non-S (EC 3.1.-.-) precursor
- Japanese pear, partial (64%)
Length = 581
Score = 30.8 bits (68), Expect = 3.0
Identities = 17/57 (29%), Positives = 28/57 (48%), Gaps = 2/57 (3%)
Frame = +3
Query: 18 KRIFYRGGVQTVVSGLESNNWGV--CDIQNTVASWGYEKNKFRVWSQIEVIFEDFFQ 72
K +F + + ++ GLE NNW C N + W +E K S+ ++ D+FQ
Sbjct: 240 KSVFDKSKISDLIKGLE-NNWPSLSCPSGNGIRLWSHEWMKHGTCSESKLTQHDYFQ 407
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,901,963
Number of Sequences: 36976
Number of extensions: 444633
Number of successful extensions: 2429
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 2353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2407
length of query: 1105
length of database: 9,014,727
effective HSP length: 106
effective length of query: 999
effective length of database: 5,095,271
effective search space: 5090175729
effective search space used: 5090175729
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Medicago: description of AC144459.6