TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144389.8 - phase: 0 
         (468 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC78524 similar to PIR|D84561|D84561 probable AAA-type ATPase [i...   215  3e-56
TC93594 weakly similar to GP|20466452|gb|AAM20543.1 unknown prot...   162  3e-40
TC87610 similar to GP|9294102|dbj|BAB01954.1 contains similarity...   157  1e-38
TC87252 similar to GP|11559424|dbj|BAB18781. mitochondrial prote...   128  1e-30
TC92685 similar to GP|10122056|gb|AAG13445.1 hypothetical protei...   127  9e-30
CA921421 weakly similar to GP|18700084|gb| At2g46620/F13A10.15 {...   118  6e-27
TC88541 weakly similar to GP|10176993|dbj|BAB10225. contains sim...    80  2e-15
AW684442 similar to GP|9758309|dbj contains similarity to AAA-ty...    57  1e-08
TC85744 homologue to PIR|T08959|T08959 proteinase homolog F19B15...    57  2e-08
TC85745 homologue to GP|17297987|dbj|BAB78491. 26S proteasome re...    55  4e-08
TC77261 homologue to GP|8777330|dbj|BAA96920.1 26S proteasome AA...    55  6e-08
TC87520 similar to GP|9757998|dbj|BAB08420.1 cell division prote...    52  4e-07
TC85768 homologue to SP|P54774|CC48_SOYBN Cell division cycle pr...    50  1e-06
BI271823 similar to GP|21592745|gb cell division protein FtsH-li...    49  3e-06
TC79040 homologue to PIR|F84674|F84674 probable AAA-type ATPase ...    49  5e-06
TC85936 homologue to GP|13537115|dbj|BAB40755. AtSUG1 {Arabidops...    48  7e-06
TC85904 similar to PIR|F84674|F84674 probable AAA-type ATPase [i...    47  1e-05
TC77012 homologue to SP|P54776|PRSA_LYCES 26S protease regulator...    47  2e-05
CB893172 homologue to PIR|T45642|T45 FtsH metalloproteinase-like...    46  3e-05
TC86159 homologue to GP|21387177|gb|AAM47992.1 26S proteasome AA...    46  3e-05

>TC78524 similar to PIR|D84561|D84561 probable AAA-type ATPase [imported] -
           Arabidopsis thaliana, partial (15%)
          Length = 1697

 Score =  215 bits (548), Expect = 3e-56
 Identities = 118/304 (38%), Positives = 184/304 (59%), Gaps = 27/304 (8%)
 Frame = +3

Query: 129 FILRIRKFDKQRILRAYIQHIHAVVDEIEKQGNRDLRFYMNASDFGPWRFVPFTHPSTFE 188
           F+L   +  + +++  YI H+ +  + I K GN+ L+ +   S  GPW+    THP++F+
Sbjct: 531 FVLSFDEKHRDKVMEKYIPHVLSTYEAI-KAGNKTLKIHSMQS--GPWKQSDLTHPASFD 701

Query: 189 TITMETDLKNRVKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSY 248
           ++ M+ DLKN +  DL+ FL+ K+ Y ++G+ WKR +LLYG  GTGKSS IAAMA +L +
Sbjct: 702 SLAMDPDLKNSIIDDLDRFLRRKKLYKKVGKPWKRGYLLYGPPGTGKSSLIAAMAKYLKF 881

Query: 249 DVYYIDLSRISTDSDLKSILLQTAPKSIIVVED-------LDRYLTEK------------ 289
           DVY +DLS + ++S+L   + +T+ +SIIV ED       LDR   +K            
Sbjct: 882 DVYDLDLSSVFSNSELMRAMRETSNRSIIVFEDIDCNSEVLDRAKPDKFPDMDFLDGIKM 1061

Query: 290 ----SSTTVTSSGILNFMDGIWS--GEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLC 343
                    T SG+LN+MDG+WS  GEER+++FT N K+ VDP LLRPGR+D+HIH    
Sbjct: 1062GKNMPPRKFTLSGLLNYMDGLWSSCGEERILIFTTNHKDKVDPALLRPGRMDMHIHLSFL 1241

Query: 344 DFSSFKTLASNYLGVK--DHKLFPQVQEIFENGASLSPAEIGELMIANRNSPSRAIKTVI 401
              +F+ LA+NYL ++   H LF Q++E+ E    +SPA + E ++ + + P  A+  ++
Sbjct: 1242KAKAFRILAANYLDIEGNHHSLFEQIEELLEK-VDVSPAVVAEYLLRSED-PDVALGALV 1415

Query: 402 TALK 405
             L+
Sbjct: 1416KFLQ 1427


>TC93594 weakly similar to GP|20466452|gb|AAM20543.1 unknown protein
           {Arabidopsis thaliana}, partial (40%)
          Length = 754

 Score =  162 bits (409), Expect = 3e-40
 Identities = 85/234 (36%), Positives = 129/234 (54%), Gaps = 41/234 (17%)
 Frame = +1

Query: 192 METDLKNRVKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVY 251
           M    K  +  DL +F K K+YY ++G+ WKR +LLYG  GTGKSS +AA+ANFL YD+Y
Sbjct: 4   MSPKKKKEIVDDLVTFSKAKEYYAKIGKPWKRGYLLYGPPGTGKSSLVAAIANFLKYDIY 183

Query: 252 YIDLSRISTDSDLKSILLQTAPKSIIVVEDLDRYL------------------------- 286
            I+L+ +  +++L+ +L+    KS++V+ED+D  L                         
Sbjct: 184 DIELTNVKNNAELRKLLIGITSKSVVVIEDIDCSLDLTGQRKTDSENDKEKEEKNEEVNQ 363

Query: 287 --------------TEKSSTTVTSSGILNFMDGIWSGE--ERVMVFTMNSKENVDPNLLR 330
                          +  ++ VT SG+LNF+DGIWS    ER+++FT N  E +D  L+R
Sbjct: 364 VAAASLQGLQAADKEKNKASQVTLSGLLNFIDGIWSASTGERLIIFTTNYVEKLDQALIR 543

Query: 331 PGRVDVHIHFPLCDFSSFKTLASNYLGVKDHKLFPQVQEIFENGASLSPAEIGE 384
            GR+D+HI      F  FK LA NYL ++ H LF  +Q + E   +++PA++ E
Sbjct: 544 RGRMDMHIELSYWGFDGFKMLAMNYLSIESHPLFETIQRLLEE-TNMTPADVAE 702


>TC87610 similar to GP|9294102|dbj|BAB01954.1 contains similarity to
           AAA-type ATPase~gene_id:T20D4.3 {Arabidopsis thaliana},
           partial (53%)
          Length = 1765

 Score =  157 bits (396), Expect = 1e-38
 Identities = 83/208 (39%), Positives = 128/208 (60%), Gaps = 32/208 (15%)
 Frame = +3

Query: 209 KGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSRISTDSDLKSIL 268
           KGK    +L + WKR +LL+G  GTGKS+ I+A+ANF++YDVY ++L+ +  +++LK +L
Sbjct: 756 KGKSIMLKLEKAWKRGYLLFGPPGTGKSTMISAIANFMNYDVYDLELTIVKDNNELKRLL 935

Query: 269 LQTAPKSIIVVEDLDRYLT-----------------------------EKSSTTVTSSGI 299
           ++T+ KSIIV+ED+D  L                              EK+ + VT SG+
Sbjct: 936 IETSSKSIIVIEDIDCSLDLTGQRKKKKEKDDVENDEKKDPIKKAEKEEKNESKVTLSGL 1115

Query: 300 LNFMDGIWS--GEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLCDFSSFKTLASNYLG 357
           LNF+DGIWS  G ER+++FT N  + +DP L+R GR+D HI    C + +FK LA NYL 
Sbjct: 1116LNFIDGIWSACGSERIIIFTTNFVDKLDPALIRRGRMDKHIEMSYCSYQAFKVLARNYLD 1295

Query: 358 VKDH-KLFPQVQEIFENGASLSPAEIGE 384
           V+ H  LFP ++++     +++PA++ E
Sbjct: 1296VETHDDLFPIIEKLL-GETNMTPADVAE 1376



 Score = 81.3 bits (199), Expect = 7e-16
 Identities = 59/211 (27%), Positives = 95/211 (44%), Gaps = 29/211 (13%)
 Frame = +2

Query: 38  LWRIIEDWFHVYQVFHVPELN--------DNMQHNTLYRKLSLYFHSLPSLQNSQLNNLV 89
           L R +  + H +  F  P +         DN++HN  Y  +  Y  +  S +  +L   V
Sbjct: 161 LRRYLRKYTHKFTNFMYPYIKITFYEKSGDNLKHNKTYTTIQTYLSANSSQRARRLKAEV 340

Query: 90  TSNTNQNDVVLTLAPNQTIHDHFLGATVSW--------------FNQTQPNRTFILRIRK 135
             ++ QN +VL++  NQ I D F G  V W              +  +   R   L   K
Sbjct: 341 IKDS-QNPLVLSMDDNQEITDEFNGVKVWWSANHITSRTQSFSIYPSSDEKRFLTLTFHK 517

Query: 136 FDKQRILRAYIQHIHAVVDEIEKQGNRDLRFYMN--ASDF-----GPWRFVPFTHPSTFE 188
             ++ I  +YIQH+      I  + NR L+ Y N  ++D+       W    F HP++FE
Sbjct: 518 RHRELITTSYIQHVLEQGKAITMK-NRQLKIYTNNPSNDWFRYRSTKWSHTTFEHPASFE 694

Query: 189 TITMETDLKNRVKSDLESFLKGKQYYHRLGR 219
           T+ +E   K  + +DL  F KGK+YY ++G+
Sbjct: 695 TLALEPKKKEEILNDLVKFKKGKEYYAKVGK 787


>TC87252 similar to GP|11559424|dbj|BAB18781. mitochondrial protein-like
           protein {Cucumis sativus}, partial (72%)
          Length = 968

 Score =  128 bits (322), Expect(2) = 1e-30
 Identities = 79/251 (31%), Positives = 131/251 (51%), Gaps = 26/251 (10%)
 Frame = +2

Query: 47  HVYQVFHVP--ELN-DNMQHNTLYRKLSLYFHSLPSLQNSQLNNLVTSNTNQNDVVLTLA 103
           ++Y   H+   EL+ + ++ +  Y+ +  Y     S +  +L   V  ++ QN +VL++ 
Sbjct: 185 YMYPYIHIKFHELSGERLKQSETYKIIQTYLSDNSSQRARRLKAEVVKDS-QNPLVLSMD 361

Query: 104 PNQTIHDHFLGATVSW--------------FNQTQPNRTFILRIRKFDKQRILRAYIQHI 149
            N+ I D F G  V W              +  +   R   L   K  ++ I  +YIQH 
Sbjct: 362 DNEEIIDEFNGVKVWWTANYTTSKSQSFSYYPTSDEKRFLTLTFHKKHREVITTSYIQH- 538

Query: 150 HAVVDEIEK--QGNRDLRFYMNASDFG-------PWRFVPFTHPSTFETITMETDLKNRV 200
             V+DE +     NR L+ Y N             W    F HP+ F T+ ME + K  +
Sbjct: 539 --VLDEGKSIMSKNRQLKLYTNNPSSNWWGYRSKKWNHTTFEHPARFGTLAMEPEKKQEI 712

Query: 201 KSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSRIST 260
            +DL  F KGK+YY ++G+ WKR +LLYG  GTGKS+ I+A+AN+++YDVY ++L+ +  
Sbjct: 713 LNDLLKFKKGKEYYAKVGKAWKRGYLLYGPPGTGKSTMISAIANYMNYDVYDLELTTVKD 892

Query: 261 DSDLKSILLQT 271
           +++LK +L++T
Sbjct: 893 NNELKRLLIET 925



 Score = 22.7 bits (47), Expect(2) = 1e-30
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 269 LQTAPKSIIVVEDLD 283
           L+ + KSIIV+ED+D
Sbjct: 918 LKRSSKSIIVIEDID 962


>TC92685 similar to GP|10122056|gb|AAG13445.1 hypothetical protein {Oryza
           sativa (japonica cultivar-group)}, partial (12%)
          Length = 665

 Score =  127 bits (319), Expect = 9e-30
 Identities = 69/131 (52%), Positives = 88/131 (66%), Gaps = 14/131 (10%)
 Frame = +1

Query: 339 HFPLCDFSSFKTLASNYLGVKDHKLFPQVQEIF-ENGASLSPAEIGELMIANRNSPSRAI 397
           HFPLCDFS+FK LAS+YLG+K+HKLFPQV+E+F + GA LSPAE+GE+MI+NRNSPSRA+
Sbjct: 1   HFPLCDFSTFKILASSYLGLKEHKLFPQVEEVFYQTGARLSPAEVGEIMISNRNSPSRAL 180

Query: 398 KTVITALKTDGDGRGCGFIERRIGNEGDGVDEGA-----------RDTRKLYGFFRLKGP 446
           KTVITA++   +G G        G   + V++ +           R+ RKLYG  RL   
Sbjct: 181 KTVITAMQVQSNGSGQRLSHSGSGRSSEEVNDTSAVICRESVHTVREFRKLYGLLRLGSR 360

Query: 447 R--KSSSSPNS 455
           R  K  S PNS
Sbjct: 361 RKEKDESVPNS 393


>CA921421 weakly similar to GP|18700084|gb| At2g46620/F13A10.15 {Arabidopsis
           thaliana}, partial (11%)
          Length = 582

 Score =  118 bits (295), Expect = 6e-27
 Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 3/159 (1%)
 Frame = +3

Query: 15  ILLFSIYAIHMIFETGLIHESTKLWRIIEDWFHVYQVFHVPELNDNMQHNTLYRKLSLYF 74
           I +FS   +    +T  +H     W  +E+  H++Q F +P  + N + N LYRK+  Y 
Sbjct: 93  IFVFSYLILRFFRKTSALHFLKHWWLSLENRLHLHQSFKIPLYDHNFRENQLYRKILTYL 272

Query: 75  HSLPSLQNSQLNNLVTSNTNQNDVVLTLAPNQTIHDHFLGATVSWFNQT---QPNRTFIL 131
            SLPS+Q++   NL  S  N +D+ L L  NQ +HD FLGA +SW N T         +L
Sbjct: 273 DSLPSVQDADFTNLF-SGPNPSDIFLHLDANQIVHDTFLGAKLSWTNNTVAGDSASALVL 449

Query: 132 RIRKFDKQRILRAYIQHIHAVVDEIEKQGNRDLRFYMNA 170
           R++K DK+R+ + Y QHI +V DE+E++  +D++ +MN+
Sbjct: 450 RMKKKDKRRVFQQYFQHILSVADELEQRRKKDIKLFMNS 566


>TC88541 weakly similar to GP|10176993|dbj|BAB10225. contains similarity to
           AAA-type ATPase~gene_id:MYH19.21 {Arabidopsis thaliana},
           partial (26%)
          Length = 854

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 19/240 (7%)
 Frame = +1

Query: 7   TPILLKIAILLFSIYAIHMIFETGLIHESTKL-----WRIIEDWFHVYQVFHVPELNDNM 61
           T +  +I  ++ S+  I  IF+    ++   L      R++   +   Q+       + +
Sbjct: 148 TEMFAQIGSIIASLMFIWAIFQQYFPYQLRNLIDKYSQRLVTFIYPYIQITFHEFTGERL 327

Query: 62  QHNTLYRKLSLYFHSLPSLQNSQLNNLVTSNTNQNDVVLTLAPNQTIHDHFLGATVSWFN 121
             +  Y  +  Y  S  S Q  +L   +  N NQ+ ++L++   + I D F G  + W +
Sbjct: 328 MRSEAYSSIENYLSSKASTQAKRLKGDIAKN-NQS-LILSMDDKEEICDEFNGMKLWWAS 501

Query: 122 QTQPN--------------RTFILRIRKFDKQRILRAYIQHIHAVVDEIEKQGNRDLRFY 167
             + +              R + L   K ++  IL  Y+ H+      I+ + NR  + Y
Sbjct: 502 GKKASNSNSISLHQNIDEKRYYKLTFHKHNRDVILGKYLSHVLKEGKAIQVK-NRQRKLY 678

Query: 168 MNASDFGPWRFVPFTHPSTFETITMETDLKNRVKSDLESFLKGKQYYHRLGRLWKRSFLL 227
            N+     W  V F HPSTFET+ M+ + K  +  DL +F K  ++Y R+GR WKR +LL
Sbjct: 679 TNSGSH--WSHVVFEHPSTFETLAMDLEKKEMIIDDLITFSKAGEFYARIGRAWKRGYLL 852


>AW684442 similar to GP|9758309|dbj contains similarity to AAA-type
           ATPase~gene_id:MUA2.5 {Arabidopsis thaliana}, partial
           (33%)
          Length = 600

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 48/172 (27%), Positives = 78/172 (44%), Gaps = 14/172 (8%)
 Frame = +2

Query: 6   YTPILLKIAILLFSIYAIHMIFETGLIHESTKLWRIIEDWFHVYQVFHVPELNDNMQHNT 65
           +T +   + +  F    +  +F   L   S KL+  + + F  Y  F + E+ D +  N 
Sbjct: 89  WTSLASILGVFAFFQTILQTVFPPELRFASAKLFNKLFNCFSSYCYFEITEI-DGVNTNE 265

Query: 66  LYRKLSLYFHSLPSLQNSQLNNLVTSNTNQNDVVLTLAPNQTIHDHFLGATVSWFNQ-TQ 124
           LY  + LY  S  S+  ++L+  +T   N +     LA N +I D F G  V W +  TQ
Sbjct: 266 LYNAVQLYLSSSVSITGNRLS--LTRAVNSSAFTFGLANNDSIIDTFNGVNVVWEHVVTQ 439

Query: 125 PN-------------RTFILRIRKFDKQRILRAYIQHIHAVVDEIEKQGNRD 163
            N             R F LRI+K DKQ +  +Y+ +I     +I ++ N+D
Sbjct: 440 RNSQTFSWRPLPDEKRGFTLRIKKKDKQLLXNSYLDYIMEKASDIRRK-NQD 592


>TC85744 homologue to PIR|T08959|T08959 proteinase homolog F19B15.70 -
           Arabidopsis thaliana, complete
          Length = 1629

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 22/170 (12%)
 Frame = +2

Query: 200 VKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSRIS 259
           +K  +E  L   + Y  +G    +  +LYG  GTGK+    A+AN  S     +      
Sbjct: 689 IKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRV------ 850

Query: 260 TDSDLKSILLQTAPK--------------SIIVVEDLDRYLTEKSSTTV--------TSS 297
             S+L    L   PK              SI+ ++++D   T++             T  
Sbjct: 851 VGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTML 1030

Query: 298 GILNFMDGIWSGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLCDFSS 347
            +LN +DG  S  +  ++   N  E++DP LLRPGR+D  I FPL D  +
Sbjct: 1031ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 1180


>TC85745 homologue to GP|17297987|dbj|BAB78491. 26S proteasome regulatory
           particle triple-A ATPase subunit2b {Oryza sativa
           (japonica cultivar-group), partial (98%)
          Length = 1696

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 22/170 (12%)
 Frame = +3

Query: 200 VKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSRIS 259
           +K  +E  L   + Y  +G    +  +LYG  GTGK+    A+AN  S     +      
Sbjct: 687 IKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRV------ 848

Query: 260 TDSDLKSILLQTAPK--------------SIIVVEDLDRYLTEKSSTTV--------TSS 297
             S+L    L   PK              +I+ ++++D   T++             T  
Sbjct: 849 VGSELIQKYLGDGPKLVRELFRVADDLSPAIVFIDEIDAVGTKRYDAHSGGEREIQRTML 1028

Query: 298 GILNFMDGIWSGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLCDFSS 347
            +LN +DG  S  +  ++   N  E++DP LLRPGR+D  I FPL D  +
Sbjct: 1029ELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKT 1178


>TC77261 homologue to GP|8777330|dbj|BAA96920.1 26S proteasome AAA-ATPase
           subunit RPT3 {Arabidopsis thaliana}, partial (94%)
          Length = 1575

 Score = 55.1 bits (131), Expect = 6e-08
 Identities = 45/165 (27%), Positives = 71/165 (42%), Gaps = 17/165 (10%)
 Frame = +2

Query: 197 KNRVKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLS 256
           K  ++  +E  L   + Y ++G    R  LLYG  GTGK+    A+AN  +     +  S
Sbjct: 602 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGS 781

Query: 257 RISTD---------SDLKSILLQTAPKSIIVVEDLDRYLTEKSSTTVTSSG--------I 299
                          D+  +  + AP +II ++++D   T +      +          +
Sbjct: 782 EFVQKYLGEGPRMVRDVFRLAKENAP-AIIFIDEVDAIATARFDAQTGADREVQRILMEL 958

Query: 300 LNFMDGIWSGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLCD 344
           LN MDG        ++   N  + +DP LLRPGR+D  I FPL D
Sbjct: 959 LNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 1093


>TC87520 similar to GP|9757998|dbj|BAB08420.1 cell division protein FtsH
           protease-like {Arabidopsis thaliana}, partial (53%)
          Length = 1667

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 52/201 (25%), Positives = 82/201 (39%), Gaps = 15/201 (7%)
 Frame = +2

Query: 201 KSDLES---FLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSR 257
           K +LE    +LK    + RLG    +  LL G+ GTGK+    A+A       +Y   S 
Sbjct: 5   KQELEEVVEYLKNPAKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSE 184

Query: 258 -----ISTDSDLKSILLQTAPKS---IIVVEDLDRYLTEKSS----TTVTSSGILNFMDG 305
                +   +     L Q A K    II ++++D   + +      T  T   +L  MDG
Sbjct: 185 FEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDG 364

Query: 306 IWSGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLCDFSSFKTLASNYLGVKDHKLFP 365
               E  +++   N  + +DP L RPGR D HI  P  D    + +   YL  K      
Sbjct: 365 FEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLHDKPTADNV 544

Query: 366 QVQEIFENGASLSPAEIGELM 386
            ++ I       + A++  L+
Sbjct: 545 DIKAIARGTPGFNGADLANLV 607


>TC85768 homologue to SP|P54774|CC48_SOYBN Cell division cycle protein 48
            homolog (Valosin containing protein homolog) (VCP).
            [Soybean], partial (95%)
          Length = 2785

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
 Frame = +2

Query: 195  DLKNRVKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYID 254
            ++K  ++  ++  ++  + + + G    +  L YG  G GK+    A+AN    +   I 
Sbjct: 1556 NVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIK 1735

Query: 255  LSRIST------DSDLKSIL--LQTAPKSIIVVEDLDRYLTEKSSTTVTSSG-------- 298
               + T      +++++ I    + +   ++  ++LD   T++ S+   + G        
Sbjct: 1736 GPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQ 1915

Query: 299  ILNFMDGIWSGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLCDFSS 347
            +L  MDG+ + +   ++   N  + +DP LLRPGR+D  I+ PL D  S
Sbjct: 1916 LLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDS 2062



 Score = 45.1 bits (105), Expect = 6e-05
 Identities = 39/159 (24%), Positives = 75/159 (46%), Gaps = 13/159 (8%)
 Frame = +2

Query: 199 RVKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYID---- 254
           +++  +E  L+  Q +  +G    +  LLYG  G+GK+    A+AN      + I+    
Sbjct: 749 QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 928

Query: 255 LSRIS--TDSDLKSILLQTAPK--SIIVVEDLDRYLTEKSST-----TVTSSGILNFMDG 305
           +S+++  ++S+L+    +      SII ++++D    ++  T         S +L  MDG
Sbjct: 929 MSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDG 1108

Query: 306 IWSGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPLCD 344
           + S    +++   N   ++DP L R GR D  I   + D
Sbjct: 1109LKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 1225


>BI271823 similar to GP|21592745|gb cell division protein FtsH-like protein
           {Arabidopsis thaliana}, partial (33%)
          Length = 714

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 45/147 (30%), Positives = 64/147 (42%), Gaps = 16/147 (10%)
 Frame = +3

Query: 203 DLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSRI---- 258
           ++ S L+G   Y +LG    R  LL G  GTGK+    A+A       + +  S      
Sbjct: 141 EIVSCLQGDINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFTVSASEFVEMF 320

Query: 259 -----STDSDLKSILLQTAPKSIIVVEDLD-------RYLTEKSSTTVTSSGILNFMDGI 306
                +   DL S   + AP SII +++LD       R   E+   T+    +L  MDG 
Sbjct: 321 VGRGAARIRDLFSRARKFAP-SIIFIDELDAVGGKRGRGFNEERDQTLNQ--LLTEMDGF 491

Query: 307 WSGEERVMVFTMNSKENVDPNLLRPGR 333
            S    V++   N  E +DP L RPGR
Sbjct: 492 ESEIRVVVIAATNRPEALDPALCRPGR 572


>TC79040 homologue to PIR|F84674|F84674 probable AAA-type ATPase [imported]
           - Arabidopsis thaliana, partial (74%)
          Length = 1193

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
 Frame = +3

Query: 208 LKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSRISTD------ 261
           +K  Q++    R W R+FLLYG  GTGKS    A+A       + I  S + +       
Sbjct: 120 VKFPQFFTGKRRPW-RAFLLYGPPGTGKSYLAKAVATEADSTFFSISSSDLVSKWMGESE 296

Query: 262 ---SDLKSILLQTAPKSIIVVEDLDRYL------TEKSSTTVTSSGILNFMDGIWSGEER 312
              S+L  +  ++AP SII V+++D          E  ++    + +L  M G+ + +++
Sbjct: 297 KLVSNLFQMARESAP-SIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQK 473

Query: 313 VMVF-TMNSKENVDPNLLRPGRVDVHIHFPLCDFSSFKTLASNYLGVKDHKL 363
           V+V    N+   +D  + R  R D  I+ PL D  + + +   +LG   H L
Sbjct: 474 VLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHNL 623


>TC85936 homologue to GP|13537115|dbj|BAB40755. AtSUG1 {Arabidopsis
           thaliana}, partial (98%)
          Length = 1633

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
 Frame = +1

Query: 185 STFETITMETDLKNRVKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMAN 244
           ST++ I         +K  +E  +K  + +  LG    +  LLYG  GTGK+    A+A+
Sbjct: 613 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 792

Query: 245 FLSYDVYYIDLSRISTD---------SDLKSILLQTAPKSIIVVEDLDRYLTEK------ 289
                   +  S +             +L  +  + AP SII ++++D   + +      
Sbjct: 793 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP-SIIFMDEIDSIGSARMESGSG 969

Query: 290 ---SSTTVTSSGILNFMDGIWSGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFP 341
              S    T   +LN +DG  +  +  ++   N  + +D  LLRPGR+D  I FP
Sbjct: 970 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 1134


>TC85904 similar to PIR|F84674|F84674 probable AAA-type ATPase [imported] -
           Arabidopsis thaliana, complete
          Length = 1793

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
 Frame = +2

Query: 208 LKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSRISTD------ 261
           +K  Q++    R W R+FLLYG  GTGKS    A+A       + +  S + +       
Sbjct: 638 VKFPQFFTGKRRPW-RAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESE 814

Query: 262 ---SDLKSILLQTAPKSIIVVEDLDRYL------TEKSSTTVTSSGILNFMDGIWSGEER 312
              S+L  +  ++AP SII V+++D          E  ++    + +L  M G+   +++
Sbjct: 815 KLVSNLFEMARESAP-SIIFVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDQK 991

Query: 313 VMVF-TMNSKENVDPNLLRPGRVDVHIHFPLCDFSSFKTLASNYLGVKDHKL 363
           V+V    N+   +D  + R  R D  I+ PL D  + + +   +LG   H L
Sbjct: 992 VLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQHMFKVHLGDTPHNL 1141


>TC77012 homologue to SP|P54776|PRSA_LYCES 26S protease regulatory subunit
           6A homolog (TAT-binding protein homolog 1) (TBP-1)
           (Mg(2+), complete
          Length = 1793

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 41/147 (27%), Positives = 65/147 (43%), Gaps = 16/147 (10%)
 Frame = +1

Query: 211 KQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMA-----NFLSYDVYYIDLSRISTDSDLK 265
           K+ + +LG    +  LLYG  GTGK+    A A      FL      +    I   + L 
Sbjct: 709 KERFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV 888

Query: 266 SILLQTAPKS---IIVVEDLDRYLTEKSSTTV--------TSSGILNFMDGIWSGEERVM 314
               Q A +    II ++++D   T++  + V        T   +LN +DG  S +   +
Sbjct: 889 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKV 1068

Query: 315 VFTMNSKENVDPNLLRPGRVDVHIHFP 341
           +   N  + +DP L+R GR+D  I FP
Sbjct: 1069IAATNRADILDPALMRSGRLDRKIEFP 1149


>CB893172 homologue to PIR|T45642|T45 FtsH metalloproteinase-like protein -
           Arabidopsis thaliana, partial (25%)
          Length = 661

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 44/151 (29%), Positives = 63/151 (41%), Gaps = 20/151 (13%)
 Frame = +3

Query: 205 ESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYIDLSR------- 257
           + FL+    Y RLG    R  LL G  GTGK+    A+A     DV +I  S        
Sbjct: 33  QEFLRNPDRYARLGARPPRGVLLVGLPGTGKTLLAKAVAG--EADVPFISCSASEFVELY 206

Query: 258 ----ISTDSDLKSILLQTAPKSIIVVEDLDRYLTEKSST---------TVTSSGILNFMD 304
                S   DL +   + AP SII ++++D     +              T + +L  MD
Sbjct: 207 VGMGASRVRDLFARAKKEAP-SIIFIDEIDAVAKSRDGKFRIVGNDEREQTLNQLLTEMD 383

Query: 305 GIWSGEERVMVFTMNSKENVDPNLLRPGRVD 335
           G  S    +++   N  + +DP L RPGR D
Sbjct: 384 GFDSNSPVIVLAATNRADVLDPALRRPGRFD 476


>TC86159 homologue to GP|21387177|gb|AAM47992.1 26S proteasome AAA-ATPase
           subunit RPT4a-like protein {Arabidopsis thaliana},
           complete
          Length = 1640

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 48/185 (25%), Positives = 81/185 (42%), Gaps = 17/185 (9%)
 Frame = +2

Query: 194 TDLKNRVKSDLESFLKGKQYYHRLGRLWKRSFLLYGSSGTGKSSFIAAMANFLSYDVYYI 253
           +D    ++  +E  L   + + R+G    +  LLYG  GTGK+    A+A+ +  +   +
Sbjct: 503 SDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKV 682

Query: 254 DLSRISTDSDLKSILL--------QTAPKSIIVVEDLD----RYLTEKSSTTV----TSS 297
             S I      +S  L        +     II ++++D    R  +E +S       T  
Sbjct: 683 VSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 862

Query: 298 GILNFMDGIWSGEERVMVFTMNSKENVDPNLLRPGRVDVHIHFPL-CDFSSFKTLASNYL 356
            +LN +DG     +  M+   N  + +DP LLRPGR+D  I  PL  + S  + L  +  
Sbjct: 863 ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAA 1042

Query: 357 GVKDH 361
           G+  H
Sbjct: 1043GIAKH 1057


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.322    0.138    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,459,027
Number of Sequences: 36976
Number of extensions: 202420
Number of successful extensions: 1296
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of query: 468
length of database: 9,014,727
effective HSP length: 100
effective length of query: 368
effective length of database: 5,317,127
effective search space: 1956702736
effective search space used: 1956702736
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)