BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144345.6 - phase: 0
(360 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC86917 similar to GP|3776080|emb|CAA77093.1 MtN9 {Medicago trun... 721 0.0
TC86916 similar to GP|3776080|emb|CAA77093.1 MtN9 {Medicago trun... 335 2e-92
TC79334 MtN9 269 1e-72
BG581966 similar to GP|3776080|emb MtN9 {Medicago truncatula}, p... 197 4e-51
TC90008 weakly similar to GP|4249376|gb|AAD14473.1| Strong simil... 139 2e-33
AL379682 weakly similar to SP|P29136|MEP1_ Metalloendoproteinase... 85 2e-17
TC79163 weakly similar to PIR|E96724|E96724 hypothetical protein... 81 5e-16
CA917134 weakly similar to PIR|E96724|E96 hypothetical protein F... 72 4e-13
AL373486 weakly similar to GP|16901508|gb| matrix metalloprotein... 55 3e-12
AL378536 homologue to GP|3776080|emb| MtN9 {Medicago truncatula}... 68 5e-12
TC84571 weakly similar to SP|P29136|MEP1_SOYBN Metalloendoprotei... 65 5e-11
TC81657 weakly similar to PIR|T51957|T51957 metalloproteinase (E... 63 2e-10
TC82218 similar to GP|7159629|emb|CAB76364.1 matrix metalloprote... 50 2e-06
BF633849 weakly similar to PIR|E71433|E714 probable metalloprote... 49 4e-06
AL378535 41 8e-04
AL375060 35 0.059
TC81934 weakly similar to PIR|E71433|E71433 probable metalloprot... 34 0.077
BM779453 similar to PIR|G96744|G96 probable peptide transporter ... 29 2.5
TC79090 similar to PIR|T46111|T46111 probable transposase - Arab... 28 4.2
TC80239 similar to GP|7208779|emb|CAB76912.1 hypothetical protei... 28 4.2
>TC86917 similar to GP|3776080|emb|CAA77093.1 MtN9 {Medicago truncatula},
partial (59%)
Length = 1294
Score = 721 bits (1862), Expect = 0.0
Identities = 359/360 (99%), Positives = 359/360 (99%)
Frame = +1
Query: 1 MMKLYQFEFFLFLLIIVNTTLSSSFPTLSQFAKPLEYIKKTTEAADYIWDKKIKKLVEDL 60
MMKLYQFEFFLFLLII NTTLSSSFPTLSQFAKPLEYIKKTTEAADYIWDKKIKKLVEDL
Sbjct: 103 MMKLYQFEFFLFLLIIGNTTLSSSFPTLSQFAKPLEYIKKTTEAADYIWDKKIKKLVEDL 282
Query: 61 KDKNLKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLEQSGPFNNTLDQETVLALKTYQRYF 120
KDKNLKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLEQSGPFNNTLDQETVLALKTYQRYF
Sbjct: 283 KDKNLKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLEQSGPFNNTLDQETVLALKTYQRYF 462
Query: 121 NIQQDTLSEILQHIALPRCGVPDRILKYNLTNDISFPKGNQWFPKGTKNLTYGFDPRNKI 180
NIQQDTLSEILQHIALPRCGVPDRILKYNLTNDISFPKGNQWFPKGTKNLTYGFDPRNKI
Sbjct: 463 NIQQDTLSEILQHIALPRCGVPDRILKYNLTNDISFPKGNQWFPKGTKNLTYGFDPRNKI 642
Query: 181 PLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVL 240
PLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVL
Sbjct: 643 PLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVL 822
Query: 241 DSTNVKSGFITLDATKYWALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPS 300
DSTNVKSGFITLDATKYWALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPS
Sbjct: 823 DSTNVKSGFITLDATKYWALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPS 1002
Query: 301 HQKNVQITDSDNLAIQKLYSSSTKANANSDDSSGCFKLFGSSSSLLISLSIVFAFVALLN 360
HQKNVQITDSDNLAIQKLYSSSTKANANSDDSSGCFKLFGSSSSLLISLSIVFAFVALLN
Sbjct: 1003HQKNVQITDSDNLAIQKLYSSSTKANANSDDSSGCFKLFGSSSSLLISLSIVFAFVALLN 1182
>TC86916 similar to GP|3776080|emb|CAA77093.1 MtN9 {Medicago truncatula},
partial (39%)
Length = 954
Score = 335 bits (858), Expect = 2e-92
Identities = 183/275 (66%), Positives = 208/275 (75%), Gaps = 13/275 (4%)
Frame = +2
Query: 3 KLYQFEFFLFLL-IIVNTTLSSSFPTLSQFAKPLEYIKKT--TEAADYIWDKKIK----- 54
KLYQFEF LFLL IIVNTTLS SF TLSQF KPLE K +E +D WDK +
Sbjct: 8 KLYQFEFLLFLLLIIVNTTLSISFSTLSQFTKPLEKFDKVINSEGSDIAWDKFVMDPLKD 187
Query: 55 KLVEDLKDKNLKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLEQSGPFNNTLDQETVLALK 114
K++E K ++NIKPS PSQL KYKG+DQIKQYL +FGYLEQSGPFNNTLDQETVLALK
Sbjct: 188 KVMESEAKKMVENIKPSPPSQLLKYKGLDQIKQYLQNFGYLEQSGPFNNTLDQETVLALK 367
Query: 115 TYQRYFNIQ--QDTLSEILQHIALPRCGVPDRILKYNLTNDISFPKGNQWFPKGTKNLTY 172
TYQRYFNI QD+L +ILQHIALPRCGVPD Y+ TNDIS+PKGNQWFPKGTKNLTY
Sbjct: 368 TYQRYFNIYAGQDSLRKILQHIALPRCGVPDMNFTYDSTNDISYPKGNQWFPKGTKNLTY 547
Query: 173 GFDPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVA 232
GF P+N+IPL++TNVFR ALT+WS TTRVLNFTET SYDDA+IKI F N+T DDGI DV
Sbjct: 548 GFAPKNEIPLNVTNVFRKALTRWSQTTRVLNFTETTSYDDADIKIVFNNMTYDDGIYDVV 727
Query: 233 VGFTFIVLDSTNVKSGF---ITLDATKYWALPTEH 264
VG + + GF TL +T + L TE+
Sbjct: 728 VGCHSYQT*FSEYEHGF**VWTLQSTGCFQLRTEN 832
Score = 96.3 bits (238), Expect = 2e-20
Identities = 46/58 (79%), Positives = 49/58 (84%)
Frame = +1
Query: 250 ITLDATKYWALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQKNVQI 307
I+LD TK+W PTE DLETAAMHQIGHLLGLEHSSD+KSIMYPTILPS QK VQI
Sbjct: 781 ISLDITKHWVFPTEDGELDLETAAMHQIGHLLGLEHSSDSKSIMYPTILPSQQKKVQI 954
>TC79334 MtN9
Length = 1241
Score = 269 bits (687), Expect = 1e-72
Identities = 177/369 (47%), Positives = 217/369 (57%), Gaps = 13/369 (3%)
Frame = +1
Query: 5 YQFEFFLFLL-IIVNTTLSSSFPTLSQFAKPLEYIKKTTEAADYIWDKKIKKLVEDLKDK 63
YQFE L LL IIVNTTLS P LS
Sbjct: 1 YQFELLLSLLFIIVNTTLSGYIPQLS---------------------------------- 78
Query: 64 NLKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLE--QSGPFNNTLDQETVLALKTYQRYFN 121
PS Q + +G+ +IKQ+L F YL+ F++ LD +T+ A+K YQ++FN
Sbjct: 79 ------PSPGKQTEEIQGLSKIKQHLYHFKYLQGLYLVGFDDYLDNKTISAIKAYQQFFN 240
Query: 122 IQQ----DTLSEILQHIALPRCGVPDRILKYNLTNDISFPK--GNQWFPKGTKNLTYGFD 175
+Q DT E LQ I LPRCGVPD + ++ D F + GN+WFPKGTK LTYGF
Sbjct: 241 LQVTGHLDT--ETLQQIMLPRCGVPD--INPDINPDFGFARAQGNKWFPKGTKELTYGFL 408
Query: 176 PRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNIT-DDDGINDVAVG 234
P +KI +D NVFR A T+WS TTRVL F+E SYDDA+IKIGFYNI+ + + DV V
Sbjct: 409 PESKISIDKVNVFRNAFTRWSQTTRVLKFSEATSYDDADIKIGFYNISYNSKEVIDVVVS 588
Query: 235 FTFIVLDSTNVKSGFITLDATKYWALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMY 294
FI N++S I L+A+K W DLET AMHQIGHLLGL+HSSD +SIMY
Sbjct: 589 DFFI-----NLRSFTIRLEASKVW---------DLETVAMHQIGHLLGLDHSSDVESIMY 726
Query: 295 PTILPSHQKNVQITDSDNLAIQKLYSSSTKANANS---DDSSGCFKLFGSSSSLLISLSI 351
PTI+P HQK VQIT SDN AIQ+LY+ T + + D SG F F SSS LL SLS+
Sbjct: 727 PTIVPLHQKKVQITVSDNQAIQQLYTKQTNQDRDELGFFDYSGDF--FESSSGLLNSLSL 900
Query: 352 VFAFVALLN 360
FAFVAL+N
Sbjct: 901 GFAFVALMN 927
>BG581966 similar to GP|3776080|emb MtN9 {Medicago truncatula}, partial (53%)
Length = 683
Score = 197 bits (502), Expect = 4e-51
Identities = 110/180 (61%), Positives = 131/180 (72%), Gaps = 9/180 (5%)
Frame = +1
Query: 182 LDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIV-- 239
LDM FR A T+WS TTRVLNF+ET SYDDA+IKIGFY+I ++D ++DV VG +FI
Sbjct: 1 LDMIEGFRNAFTRWSQTTRVLNFSETTSYDDADIKIGFYHIYNNDIVDDVVVGDSFISRN 180
Query: 240 LDSTNVKSGFITLDATKYWALPT-------EHRGFDLETAAMHQIGHLLGLEHSSDNKSI 292
LDS NVKSG I L+ +K+W PT E + FDLET MHQIGHLLGL+HSSD +SI
Sbjct: 181 LDS-NVKSGMIRLERSKFWVSPTTTYFKKWELQEFDLETVVMHQIGHLLGLDHSSDKESI 357
Query: 293 MYPTILPSHQKNVQITDSDNLAIQKLYSSSTKANANSDDSSGCFKLFGSSSSLLISLSIV 352
MYP I P +K VQITDSDN AIQ+LY+++ KAN NS D SGCFKLF SS LL +V
Sbjct: 358 MYPLIDPLQEKKVQITDSDNQAIQQLYTNTAKANPNS-DHSGCFKLFESSMFLLAFCPLV 534
>TC90008 weakly similar to GP|4249376|gb|AAD14473.1| Strong similarity to
GP|2829864 F3I6.6 zinc metalloproteinase homolog from
Arabidopsis thaliana BAC, partial (21%)
Length = 1173
Score = 139 bits (350), Expect = 2e-33
Identities = 110/346 (31%), Positives = 177/346 (50%), Gaps = 24/346 (6%)
Frame = +2
Query: 2 MKLYQFEFFLFLLII----VNTTLSSSF-PTLSQFAKPLE--YIKKTTEAADY--IWDKK 52
MKL + ++FLL++ + + S SF P + + Y+K+ T + + IW+K
Sbjct: 44 MKLRTQKGYMFLLVLSFLLADVSESISFAPAIGLIVRSRIPFYLKRITSSKLFSSIWNKL 223
Query: 53 IKKLVEDLKDKNLKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLEQSGPFNNTLDQETV-- 110
LK ++ + G+ +K+YL FGYL S +N D T
Sbjct: 224 KSIFNNALKIGDIAS-------------GISDLKEYLQFFGYLNSSTLHSNFTDAFTENL 364
Query: 111 -LALKTYQRYFNIQQDTL--SEILQHIALPRCGVPDRI-----LKYNLTNDISFPKGNQW 162
A+ +Q FN+ +I + I+ PRCGVPD I +K N N + P W
Sbjct: 365 QSAIIEFQTNFNLNTTGQLDQDIYKIISKPRCGVPDIINGTTTMKNNFINK-TMPFKPWW 541
Query: 163 FPKGTKNLTYGFDPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNI 222
++L Y F P N + ++ ++F+ A +WSN T LNF ET S++D++I+I F +
Sbjct: 542 RNVENRSLAYAFHPENNVTDNVKSLFQDAFNRWSNATE-LNFIETMSFNDSDIRIAFLTL 718
Query: 223 TDDDGINDVAVGFTFIVLDSTNVKSGFITLDATKYWALPTEH----RGFDLETAAMHQIG 278
G VG ++I +++V G + LDA + W LP+E+ DLE+ MHQ+G
Sbjct: 719 DGKGG----TVGGSYI---NSSVNVGSVYLDADEQWVLPSENVVEEDDVDLESVVMHQVG 877
Query: 279 HLLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNL-AIQKLYSSST 323
HLLGL HSS ++IMYP +L +K +++ + D+L IQ++Y +T
Sbjct: 878 HLLGLGHSSVEEAIMYPIVL--QEKKIELVNVDDLQRIQEIYGVNT 1009
>AL379682 weakly similar to SP|P29136|MEP1_ Metalloendoproteinase 1 precursor
(EC 3.4.24.-) (SMEP1). [Soybean] {Glycine max}, partial
(15%)
Length = 386
Score = 85.1 bits (209), Expect(2) = 2e-17
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 8/115 (6%)
Frame = +3
Query: 65 LKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLE--QSGPFNNTLDQETVLALKTYQRYFNI 122
+ + PSL Q + +G+ +IKQ+L F YL+ F++ LD +T+ A+K YQ++FN+
Sbjct: 54 IPQLSPSLGKQTEEIQGLSKIKQHLYHFKYLQGLYLVGFDDYLDNKTISAIKAYQQFFNL 233
Query: 123 Q----QDTLSEILQHIALPRCGVPDRILKYNLTNDISFPK--GNQWFPKGTKNLT 171
Q DT E LQ I LPRCGVPD + ++ D F + GN+WFPKGTK LT
Sbjct: 234 QVTGHLDT--ETLQQIMLPRCGVPD--INPDINPDFGFARAQGNKWFPKGTKELT 386
Score = 21.6 bits (44), Expect(2) = 2e-17
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 13 LLIIVNTTLSSSFPTLSQFA 32
L IIVNTT +P++ F+
Sbjct: 17 LFIIVNTTAFRLYPSIVSFS 76
>TC79163 weakly similar to PIR|E96724|E96724 hypothetical protein F20P5.11
[imported] - Arabidopsis thaliana, partial (32%)
Length = 762
Score = 81.3 bits (199), Expect = 5e-16
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 19/156 (12%)
Frame = +2
Query: 79 YKGVDQIKQYLSDFGYLEQSGPFNNTLDQETVL--ALKTYQRYFN--IQQDTLSEILQHI 134
Y G+ ++K Y + FGY+ P N T D + L A++TYQ+ FN I + + +I
Sbjct: 296 YDGLSKLKNYFNHFGYIPNGPPSNFTDDFDEALESAVRTYQKNFNLNITGELDDATMNYI 475
Query: 135 ALPRCGVPDRIL--------KYNLTND-------ISFPKGNQWFPKGTKNLTYGFDPRNK 179
PRCGV D I K+N ++ SF G +P+GT+ LTY FDP
Sbjct: 476 VKPRCGVADIINGTTSMNSGKFNSSSTNFHTVAHYSFFPGQPRWPEGTQTLTYAFDPSEN 655
Query: 180 IPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANI 215
+ VF A QWS T + FTE SY ++I
Sbjct: 656 LDDATKQVFANAFNQWSKVT-TITFTEATSYSSSDI 760
>CA917134 weakly similar to PIR|E96724|E96 hypothetical protein F20P5.11
[imported] - Arabidopsis thaliana, partial (26%)
Length = 723
Score = 71.6 bits (174), Expect = 4e-13
Identities = 48/170 (28%), Positives = 80/170 (46%), Gaps = 25/170 (14%)
Frame = +1
Query: 79 YKGVDQIKQYLSDFGYLEQS--GPFNNTLDQETVLALKTYQRYFNIQ-QDTLSEI-LQHI 134
Y G+ +K Y FGY+ +S F++ D + A+KTYQ+ FN+ L ++ L+ +
Sbjct: 130 YNGLSNLKNYFQHFGYIPRSPKSNFSDDFDDDLQEAIKTYQKNFNLNVTGELDDMTLRQV 309
Query: 135 ALPRCGVPDRI---------------------LKYNLTNDISFPKGNQWFPKGTKNLTYG 173
LPRCGV D I L+++ + + G +P+G + LTY
Sbjct: 310 MLPRCGVADIINGTTTMNAGKDTETTSNSDSKLRFHTVSHFTVFPGQPRWPEGKQELTYA 489
Query: 174 FDPRNKIPLDMTNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNIT 223
F P N++ + +VF TA +WS T LN + + ++ F+ T
Sbjct: 490 FFPGNELTETVKSVFATAFARWSEVT-TLNSPKQRYIPALILRSDFFTAT 636
Score = 27.3 bits (59), Expect = 9.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 204 FTETKSYDDANIKIGFYNITDDDG 227
FTET Y A+IKIGF + DG
Sbjct: 576 FTETTLYSGADIKIGFLHGDHGDG 647
>AL373486 weakly similar to GP|16901508|gb| matrix metalloproteinase MMP2
{Glycine max}, partial (7%)
Length = 409
Score = 54.7 bits (130), Expect(2) = 3e-12
Identities = 33/81 (40%), Positives = 49/81 (59%), Gaps = 6/81 (7%)
Frame = +2
Query: 65 LKNIKPSLPSQLPKYKGVDQIKQYLSDFGYLE--QSGPFNNTLDQETVLALKTYQRYFNI 122
+ + PSL Q + +G+ +IKQ+L F YL+ F++ LD +T+ A+K YQ++FN+
Sbjct: 71 IPQLSPSLGKQTEEIQGLSKIKQHLYHFKYLQGLYLVGFDDYLDNKTISAIKGYQQFFNL 250
Query: 123 Q----QDTLSEILQHIALPRC 139
Q DT E LQ I LPRC
Sbjct: 251 QVTGHLDT--ETLQQIMLPRC 307
Score = 34.3 bits (77), Expect(2) = 3e-12
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 141 VPDRILKYNLTNDISFPK--GNQWFPKGTKNLTY 172
VPD + ++ D F + GN+WFPKGTK LTY
Sbjct: 312 VPD--INPDINPDFGFGRAQGNKWFPKGTKELTY 407
>AL378536 homologue to GP|3776080|emb| MtN9 {Medicago truncatula}, partial
(20%)
Length = 349
Score = 68.2 bits (165), Expect = 5e-12
Identities = 39/63 (61%), Positives = 48/63 (75%)
Frame = +1
Query: 298 LPSHQKNVQITDSDNLAIQKLYSSSTKANANSDDSSGCFKLFGSSSSLLISLSIVFAFVA 357
+P Q+ VQIT SDNLAIQ+LY++S KAN +S D SGCFKLF S+ SLS+ FAFVA
Sbjct: 1 VPLQQRKVQITVSDNLAIQQLYTNSVKANPDS-DHSGCFKLF--ESTFDTSLSLGFAFVA 171
Query: 358 LLN 360
L+N
Sbjct: 172 LMN 180
>TC84571 weakly similar to SP|P29136|MEP1_SOYBN Metalloendoproteinase 1
precursor (EC 3.4.24.-) (SMEP1). [Soybean] {Glycine
max}, partial (28%)
Length = 506
Score = 64.7 bits (156), Expect = 5e-11
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 9/97 (9%)
Frame = +2
Query: 246 KSGFITLDATKYW---------ALPTEHRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPT 296
++G LDA + W +LPT DLE+ A+H+IGHLLGL HSS+ ++IM+PT
Sbjct: 11 RNGRFHLDAAEDWVVSGDVSKSSLPT---AVDLESVAVHEIGHLLGLGHSSEEEAIMFPT 181
Query: 297 ILPSHQKNVQITDSDNLAIQKLYSSSTKANANSDDSS 333
I S K V + D D IQ LY ++ N ++ SS
Sbjct: 182 I-SSRMKKVVLADDDVRGIQYLYGTNPSFNGSTVISS 289
>TC81657 weakly similar to PIR|T51957|T51957 metalloproteinase (EC 3.4.24.-)
[imported] - Arabidopsis thaliana, partial (24%)
Length = 537
Score = 63.2 bits (152), Expect = 2e-10
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Frame = +2
Query: 248 GFITLDATKYWALPTE------HRGFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSH 301
G + LD + W + + DLE+ +H+IGHLLGL HSS ++IMYPTI S
Sbjct: 8 GRLHLDKAEDWVVNGDVTESSLSNAVDLESVVVHEIGHLLGLGHSSIEEAIMYPTI-SSR 184
Query: 302 QKNVQITDSDNLAIQKLYSS------STKANANSDDSSGCFKLFGSSSSLLISLSIVF 353
K V++ D IQ LY S +T A + DSS FG + + LS+VF
Sbjct: 185 TKKVELESDDIEGIQMLYGSNPNFTGTTTATSRDRDSS-----FGGRHGVSLFLSLVF 343
>TC82218 similar to GP|7159629|emb|CAB76364.1 matrix metalloproteinase
{Cucumis sativus}, partial (19%)
Length = 688
Score = 49.7 bits (117), Expect = 2e-06
Identities = 27/73 (36%), Positives = 34/73 (45%)
Frame = +1
Query: 267 FDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPSHQKNVQITDSDNLAIQKLYSSSTKAN 326
FDLET A+H++GHLLGL HS+D S MYP Y + + N
Sbjct: 259 FDLETVALHEMGHLLGLAHSTDQNSAMYP-----------------------YWAGVRRN 369
Query: 327 ANSDDSSGCFKLF 339
N DD G L+
Sbjct: 370 LNQDDVDGITALY 408
>BF633849 weakly similar to PIR|E71433|E714 probable metalloproteinase (EC
3.4.24.-) - Arabidopsis thaliana, partial (5%)
Length = 544
Score = 48.5 bits (114), Expect = 4e-06
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Frame = +2
Query: 21 LSSSFPTLSQFAKPLEYIKKTTEAADYIWDKKIKKLVEDLKDKNLKNIKPSLPSQLPKYK 80
LS SF +L P ++ T K +D ++L+N+K Q K
Sbjct: 47 LSISFLSLLLLKNPFSIVESRTI-----------KPSKDSFTQSLQNLKGVQKGQTQK-- 187
Query: 81 GVDQIKQYLSDFGYLE------QSGPFNNTLDQETVLALKTYQRYFNI----QQDTLSEI 130
G+ ++K YL FGYL S N+ D+ ALK +Q Y ++ + DT +
Sbjct: 188 GIGELKNYLKRFGYLNVQHDATPSTTLNDHFDENLEFALKDFQTYHHLHVTGRVDTTT-- 361
Query: 131 LQHIALPRCGVPD 143
++ ++LPRCGVPD
Sbjct: 362 IKILSLPRCGVPD 400
>AL378535
Length = 207
Score = 40.8 bits (94), Expect = 8e-04
Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Frame = +1
Query: 1 MMKLYQFEFFLFL-LIIVNTTLSSSFPTLS-----QFAKPLEYIKKT 41
MMKLYQ+EF L L LIIVNTT S P LS Q K L+ IK++
Sbjct: 19 MMKLYQYEFLLSLFLIIVNTTFSGYVPQLSPSLGKQIGKTLDKIKQS 159
>AL375060
Length = 248
Score = 34.7 bits (78), Expect = 0.059
Identities = 19/23 (82%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +2
Query: 1 MMKLYQFEFFLFL-LIIVNTTLS 22
MMKLYQFEF L L LIIVNTT S
Sbjct: 11 MMKLYQFEFLLSLFLIIVNTTFS 79
>TC81934 weakly similar to PIR|E71433|E71433 probable metalloproteinase (EC
3.4.24.-) - Arabidopsis thaliana, partial (24%)
Length = 619
Score = 34.3 bits (77), Expect = 0.077
Identities = 22/68 (32%), Positives = 32/68 (46%), Gaps = 5/68 (7%)
Frame = +1
Query: 81 GVDQIKQYLSDFGYLE---QSGPFNNTLDQETVLALKTYQRYFN--IQQDTLSEILQHIA 135
G+ ++K+Y + FGYL + F +T D A+ YQ+ I S + I
Sbjct: 217 GMAELKKYFNRFGYLSPPLTTANFTDTFDSSFQSAVVLYQKNLGLPITGKLDSNTISTIV 396
Query: 136 LPRCGVPD 143
PRCGV D
Sbjct: 397 SPRCGVSD 420
>BM779453 similar to PIR|G96744|G96 probable peptide transporter PTR2-B
T9N14.16 [imported] - Arabidopsis thaliana, partial
(26%)
Length = 547
Score = 29.3 bits (64), Expect = 2.5
Identities = 14/42 (33%), Positives = 24/42 (56%)
Frame = +2
Query: 38 IKKTTEAADYIWDKKIKKLVEDLKDKNLKNIKPSLPSQLPKY 79
I+ + A+ +IWD I+K ++ KNL+N K ++ P Y
Sbjct: 317 IECKSHAS*FIWDLIIEKFLKTNHGKNLRNTKQNILRNQPPY 442
>TC79090 similar to PIR|T46111|T46111 probable transposase - Arabidopsis
thaliana, partial (28%)
Length = 1068
Score = 28.5 bits (62), Expect = 4.2
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 25 FPTLSQFAKPLEYIKKTTEAADYIWDKKIKKL 56
+PTLS+ A+ + I +T +D I+DKK K++
Sbjct: 668 YPTLSKMARDILSIPVSTVPSDSIFDKKSKEM 763
>TC80239 similar to GP|7208779|emb|CAB76912.1 hypothetical protein {Cicer
arietinum}, partial (43%)
Length = 930
Score = 28.5 bits (62), Expect = 4.2
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 20 TLSSSFPTLSQFAKPLEYIKKTTEAADYIWDKKIKKLVEDLKDKNLKNIKP 70
TL+ + Q KP+E K+ + + + K+K L ++++ + I+P
Sbjct: 384 TLTRTLEESDQIEKPVEVTKRAVKPSQFTKQNKVKALPMAIRNRGKRRIQP 536
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.318 0.135 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,631,982
Number of Sequences: 36976
Number of extensions: 143322
Number of successful extensions: 967
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of query: 360
length of database: 9,014,727
effective HSP length: 97
effective length of query: 263
effective length of database: 5,428,055
effective search space: 1427578465
effective search space used: 1427578465
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC144345.6