BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142526.4 + phase: 0
(187 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC91730 weakly similar to PIR|E96668|E96668 protein F1N19.3 [imp... 92 9e-20
TC82187 weakly similar to GP|21553792|gb|AAM62885.1 unknown {Ara... 76 7e-15
TC88373 weakly similar to GP|21553792|gb|AAM62885.1 unknown {Ara... 70 6e-13
TC85112 similar to GP|19911581|dbj|BAB86894. syringolide-induced... 50 5e-07
TC83802 similar to GP|7417006|gb|AAF62403.1| harpin inducing pro... 46 7e-06
TC87566 weakly similar to GP|21554256|gb|AAM63331.1 unknown {Ara... 44 4e-05
TC89445 similar to GP|7417006|gb|AAF62403.1| harpin inducing pro... 44 5e-05
TC81293 similar to GP|19911581|dbj|BAB86894. syringolide-induced... 39 0.001
TC82735 weakly similar to GP|6686408|gb|AAF23842.1| F1E22.7 {Ara... 39 0.001
AW690364 weakly similar to GP|9759067|dbj contains similarity to... 38 0.002
TC83853 weakly similar to GP|13877665|gb|AAK43910.1 Unknown prot... 36 0.010
CA923022 similar to GP|19571103|dbj putative vesicle transport v... 35 0.022
TC87012 similar to GP|9294029|dbj|BAB01986.1 vesicle transport v... 35 0.022
TC76930 similar to GP|19911581|dbj|BAB86894. syringolide-induced... 34 0.029
TC76929 similar to GP|19911581|dbj|BAB86894. syringolide-induced... 34 0.029
TC89629 weakly similar to GP|11994147|dbj|BAB01168. non-race spe... 34 0.038
BQ137315 homologue to GP|13879785|gb| hypothetical protein {Myco... 31 0.25
TC89517 weakly similar to PIR|A85475|A85475 hypothetical protein... 30 0.42
TC89211 similar to GP|3668093|gb|AAC61825.1| unknown protein {Ar... 30 0.55
AW127141 homologue to GP|18033654|gb| putative nodule membrane p... 29 1.2
>TC91730 weakly similar to PIR|E96668|E96668 protein F1N19.3 [imported] -
Arabidopsis thaliana, partial (13%)
Length = 342
Score = 92.4 bits (228), Expect = 9e-20
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 142 TVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC 187
T EIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC
Sbjct: 3 TREIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC 140
>TC82187 weakly similar to GP|21553792|gb|AAM62885.1 unknown {Arabidopsis
thaliana}, partial (13%)
Length = 581
Score = 76.3 bits (186), Expect = 7e-15
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Frame = +2
Query: 9 PPSNRTNLASCLVATVFLIFILIIIFT-LYFTLFKPQDPKISVTAVQL----PSFNLTNN 63
P R +C+ + L+ +L+I+ L FTLFKP+DPK V + L P
Sbjct: 50 PKKGRNKCVTCICIVLLLLLVLVIVCVILAFTLFKPKDPKTKVVSATLEGISPRLTFPAI 229
Query: 64 STTVNFTFSQYTSVKNPNRGTFSHYDSSFQLLSYGKQIGFMFVPAGKINARRTQFMAATF 123
+ +N T + V N N +F H D + L+ G ++G + AG I A+ + +
Sbjct: 230 NIQLNVTLNLKIQVDNQNHASFKHADGTSLLMYKGVEVGDTDIYAGLIPAKGSTILPCRL 409
Query: 124 TVQSLPLNLEPEGL---QMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCR 172
T+Q+ L GL MG + +E+ + GRV L H+ A ++C+
Sbjct: 410 TLQADKLASNVTGLLGDLMGGQLSLEAVTXIPGRVTFLGFIKKHIVAXSNCQ 565
>TC88373 weakly similar to GP|21553792|gb|AAM62885.1 unknown {Arabidopsis
thaliana}, partial (25%)
Length = 970
Score = 69.7 bits (169), Expect = 6e-13
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Frame = +2
Query: 18 SCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNN----STTVNFTFSQ 73
+CL+ T I I+++I L FT+FK + P +V +++L F++ + +N T
Sbjct: 209 ACLIVTTVFIAIVLLIVILAFTVFKSKHPVTTVNSLKLRDFDVNLDIAKLRVDLNVTLDV 388
Query: 74 YTSVKNPNRGTFSHYDSSFQLLSYGKQIGFMFVPAGKINARRTQ--FMAATFTVQSLPLN 131
SVKNPN+ F + +++ L G+ IG + + AG I++ T+ + TF L N
Sbjct: 389 DVSVKNPNKVGFKYSNTTAHLNYRGQLIGEVPISAGDISSGETKGFNLTLTFMADRLLSN 568
Query: 132 LEPEGLQMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAIAVSDGSVLGFHC 187
+ T+ + + + + G+V +L HV + A C A+ S+ +V C
Sbjct: 569 SQLFSDITSGTLPLNTFLTIFGKVNILGFIKVHVISSASCDFAVNTSNKTVGNQEC 736
>TC85112 similar to GP|19911581|dbj|BAB86894. syringolide-induced protein
B13-1-9 {Glycine max}, partial (27%)
Length = 597
Score = 50.1 bits (118), Expect = 5e-07
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Frame = +1
Query: 7 ETPPSNRTNLASCLVATVFLIFILIIIFT-----LYFTLFKPQDPKISVTAVQLPSFNLT 61
E P T CL +++I + III + + + P+ K V +L FN T
Sbjct: 82 EQPSKRSTRCCFCLYRVLWIILVTIIILVSLIILVIYIIITPRSFKFHVNQAKLTQFNFT 261
Query: 62 NNSTTVNFTFSQYTSVKNPNRGTFSHYD 89
NN+TT+N+ + +NPN+ +YD
Sbjct: 262 NNNTTLNYNLVLNFTAQNPNKKLKIYYD 345
>TC83802 similar to GP|7417006|gb|AAF62403.1| harpin inducing protein
{Nicotiana tabacum}, partial (19%)
Length = 435
Score = 46.2 bits (108), Expect = 7e-06
Identities = 25/68 (36%), Positives = 41/68 (59%)
Frame = +2
Query: 15 NLASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQY 74
NL L+ TV +I I I +F L++ + +P K+ VT L FN TNN++ +N+ +
Sbjct: 224 NLIFKLILTVIII-IGIAVF-LFWLIVRPNAVKVHVTDATLTQFNYTNNNSNLNYNLALN 397
Query: 75 TSVKNPNR 82
+++NPNR
Sbjct: 398 ITIRNPNR 421
>TC87566 weakly similar to GP|21554256|gb|AAM63331.1 unknown {Arabidopsis
thaliana}, partial (44%)
Length = 1042
Score = 43.9 bits (102), Expect = 4e-05
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Frame = +3
Query: 9 PPSNRTNLASCLVATVFLIFILIII-----FTLYFTLFKPQDPKISVTAVQLPSFNLTNN 63
PP R + +F I I++II + F +F+P+ PK SV +++ F+L+NN
Sbjct: 291 PPKKRRSCCCKFFCWIFSILIILIIALGITIGILFLVFRPKIPKYSVDELRVTQFDLSNN 470
Query: 64 STTVNFTFSQYTSVKNPNR 82
+ ++ TF+ + +NPN+
Sbjct: 471 N-SLAVTFNLTITARNPNK 524
>TC89445 similar to GP|7417006|gb|AAF62403.1| harpin inducing protein
{Nicotiana tabacum}, partial (36%)
Length = 651
Score = 43.5 bits (101), Expect = 5e-05
Identities = 26/107 (24%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +1
Query: 19 CLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVK 78
C + T ++ I+I+ F +++ + +P K +V L FN N + T+++ + +V+
Sbjct: 232 CKIITTIIVIIVILGF-IFWLIVRPNVVKFTVNDATLTQFNF-NETNTLHYDLALNVTVR 405
Query: 79 NPNRGTFSHYDSSFQLLSYGKQIGFMFVPAGKI--NARRTQFMAATF 123
NPNR +YD + + +++ K + F G+ + + T F+ F
Sbjct: 406 NPNRRVGIYYD-TIETMAFYKDVQFANQTLGRFFQHHKNTSFLNPVF 543
>TC81293 similar to GP|19911581|dbj|BAB86894. syringolide-induced protein
B13-1-9 {Glycine max}, partial (60%)
Length = 799
Score = 39.3 bits (90), Expect = 0.001
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +1
Query: 7 ETPPSNRTNLASC---------LVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPS 57
E P NR C L+A + L ++I+IF L + +P+ K SV +L
Sbjct: 55 EAQPHNRGRRCCCCLFGIIWKLLLAIIVLAGLIILIFWL---VVQPRTFKFSVKEAKLTK 225
Query: 58 FNLTNNSTTVNFTFSQYTSVKNPNRGTFSHYD 89
FN ++++ T+++ + +NPN+ +YD
Sbjct: 226 FNYSDDTNTLHYNLVLNFTARNPNKKLNIYYD 321
>TC82735 weakly similar to GP|6686408|gb|AAF23842.1| F1E22.7 {Arabidopsis
thaliana}, partial (74%)
Length = 965
Score = 39.3 bits (90), Expect = 0.001
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Frame = +1
Query: 23 TVFLIFILIIIFTL--YFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVKNP 80
T+ LI I+ I T+ + F+P+ K SV +++ FNL++++ ++ TF+ + +NP
Sbjct: 268 TILLILIIAIGITVGALYLAFRPKLTKYSVDRLRITQFNLSDDN-SLFVTFNVTVTARNP 444
Query: 81 NRGTFSHYDSSFQLLSYGKQIGFM--FVPAGKINARRTQFMAATFTVQSLP----LNLEP 134
N+ +Y S + ++ K+ G +P R T + T Q+ N
Sbjct: 445 NKKIGIYYVSGSHISAWYKETGLCEGSLPKFYQGHRNTTVLNLPLTGQTQDATGLFNTLQ 624
Query: 135 EGLQMGPTVEIESTIEMVGRVRVLHLFSHHVEAKADCRVAI 175
+ LQ + ++ + RV++ L V+ + C + +
Sbjct: 625 QQLQEAGNIPLDIKVNQNVRVKLGKLKIFRVKFRVRCSLQV 747
>AW690364 weakly similar to GP|9759067|dbj contains similarity to
harpin-induced protein~gene_id:MGN6.8 {Arabidopsis
thaliana}, partial (48%)
Length = 684
Score = 38.1 bits (87), Expect = 0.002
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +3
Query: 23 TVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVKNPNR 82
+ F IL++I +YF L KP P+ S+ + + NL+ +N + KNPN+
Sbjct: 105 STFFTTILLLILLIYFIL-KPSKPQFSLQELDIYQLNLSG--PILNSSIQLTLLSKNPNQ 275
Query: 83 GTFSHYDSSFQLLSYGKQ--IGFMFVPAGKINARRTQFMAATFTVQSLPL 130
+YD +Y Q FVP + + F++++ LP+
Sbjct: 276 KVSIYYDEFQVYATYKNQQITSDSFVPPFYQGTQESNFLSSSLIGNGLPV 425
>TC83853 weakly similar to GP|13877665|gb|AAK43910.1 Unknown protein
{Arabidopsis thaliana}, partial (49%)
Length = 815
Score = 35.8 bits (81), Expect = 0.010
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Frame = +1
Query: 3 KHEHETPPSNRTNL-ASCLVATVFLIFILIIIFTL----YFTLFKPQDPKISVTAVQLPS 57
++E T +R N CL + +IFILI + + ++ +F+P+ P ++ + +
Sbjct: 217 RYEQYTRKKHRRNRHCCCLCWFIGIIFILIALLGIAAGIFYLVFRPKAPNYTIENITIRG 396
Query: 58 FNLTNNSTTVNFT--FSQYTSVKNPN 81
N+T+ S+T + F NPN
Sbjct: 397 INITSPSSTTGISPEFDVTVKADNPN 474
>CA923022 similar to GP|19571103|dbj putative vesicle transport v-SNARE
protein {Oryza sativa (japonica cultivar-group)},
partial (21%)
Length = 324
Score = 34.7 bits (78), Expect = 0.022
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 11 SNRTNLASCLVATVFLIFILIIIFTLYFTLFKPQDPKIS 49
S R N C+++T+ + +L+I+ TLYF L K P S
Sbjct: 184 SKRMNRNKCIISTIVAVLVLVIMLTLYFKLSK*TIPDTS 68
>TC87012 similar to GP|9294029|dbj|BAB01986.1 vesicle transport v-SNARE
(vesicle soluble NSF attachment protein receptor)
protein, complete
Length = 1079
Score = 34.7 bits (78), Expect = 0.022
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 11 SNRTNLASCLVATVFLIFILIIIFTLYFTLFKPQDPKIS 49
S R N C+++T+ + +L+I+ TLYF L K P S
Sbjct: 770 SKRMNRNKCIISTIVAVLVLVIMLTLYFKLSK*TIPDTS 886
>TC76930 similar to GP|19911581|dbj|BAB86894. syringolide-induced protein
B13-1-9 {Glycine max}, partial (87%)
Length = 996
Score = 34.3 bits (77), Expect = 0.029
Identities = 23/87 (26%), Positives = 43/87 (48%), Gaps = 6/87 (6%)
Frame = +2
Query: 9 PPSNRTNLASCLVATVF--LIFILIIIFTL----YFTLFKPQDPKISVTAVQLPSFNLTN 62
P S+R+ C + + F L+ LI++ L ++ + +P+ K V L F+ +N
Sbjct: 209 PRSHRSRSCCCCLFSFFWKLLIALIVLAGLAVLIFYLVVQPRGFKFYVDEANLTEFDYSN 388
Query: 63 NSTTVNFTFSQYTSVKNPNRGTFSHYD 89
N T+N+ + +NPN+ +YD
Sbjct: 389 N--TLNYNMVLNFTARNPNKKLNIYYD 463
>TC76929 similar to GP|19911581|dbj|BAB86894. syringolide-induced protein
B13-1-9 {Glycine max}, partial (79%)
Length = 767
Score = 34.3 bits (77), Expect = 0.029
Identities = 23/87 (26%), Positives = 43/87 (48%), Gaps = 6/87 (6%)
Frame = +2
Query: 9 PPSNRTNLASCLVATVF--LIFILIIIFTL----YFTLFKPQDPKISVTAVQLPSFNLTN 62
P S+R+ C + + F L+ LI++ L ++ + +P+ K V L F+ +N
Sbjct: 185 PRSHRSRSCCCCLFSFFWKLLIALIVLAGLAVLIFYLVVQPRGFKFYVDEANLTEFDYSN 364
Query: 63 NSTTVNFTFSQYTSVKNPNRGTFSHYD 89
N T+N+ + +NPN+ +YD
Sbjct: 365 N--TLNYNMVLNFTARNPNKKLNIYYD 439
>TC89629 weakly similar to GP|11994147|dbj|BAB01168. non-race specific
disease resistance protein {Arabidopsis thaliana},
partial (25%)
Length = 864
Score = 33.9 bits (76), Expect = 0.038
Identities = 20/72 (27%), Positives = 37/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 19 CLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTNNSTTV-NFTFSQYTSV 77
C + F+I I ++ ++ +L + +PK+ + + LP+ N N+T N TF+ +
Sbjct: 75 CSCCSGFIITIGLMALFIWLSL-RVDEPKLYIDKIYLPALNKALNTTAKSNTTFTFLLKL 251
Query: 78 KNPNRGTFSHYD 89
NPN+ YD
Sbjct: 252 VNPNKDKGIQYD 287
>BQ137315 homologue to GP|13879785|gb| hypothetical protein {Mycobacterium
tuberculosis CDC1551}, partial (2%)
Length = 921
Score = 31.2 bits (69), Expect = 0.25
Identities = 24/75 (32%), Positives = 35/75 (46%)
Frame = +1
Query: 1 MTKHEHETPPSNRTNLASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNL 60
+T H TPP L C++A I L I LY T + P S+T + P L
Sbjct: 562 ITTRSHTTPPFTSIMLPICIIAA--YITTLTIDPLLYHTNVR-HIPLTSLTRLPPPLHTL 732
Query: 61 TNNSTTVNFTFSQYT 75
T ++ T+ ++FS T
Sbjct: 733 TCSNYTIIWSFSHMT 777
>TC89517 weakly similar to PIR|A85475|A85475 hypothetical protein AT4g40080
[imported] - Arabidopsis thaliana, partial (46%)
Length = 1177
Score = 30.4 bits (67), Expect = 0.42
Identities = 25/84 (29%), Positives = 44/84 (51%), Gaps = 1/84 (1%)
Frame = -1
Query: 30 LIIIFTLYFT-LFKPQDPKISVTAVQLPSFNLTNNSTTVNFTFSQYTSVKNPNRGTFSHY 88
+III +L+ + LFK Q + + PSF+L+ NS T+ T + + ++ P+ T S
Sbjct: 850 IIIILSLHISNLFKTQTNSTTSPKPRQPSFSLSPNSLTL--TKTSFITI-TPSSSTKSII 680
Query: 89 DSSFQLLSYGKQIGFMFVPAGKIN 112
++ S +GF +P+ K N
Sbjct: 679 STTTLFCSLIGVLGFFPIPSIKAN 608
>TC89211 similar to GP|3668093|gb|AAC61825.1| unknown protein {Arabidopsis
thaliana}, partial (18%)
Length = 579
Score = 30.0 bits (66), Expect = 0.55
Identities = 21/76 (27%), Positives = 36/76 (46%)
Frame = +1
Query: 3 KHEHETPPSNRTNLASCLVATVFLIFILIIIFTLYFTLFKPQDPKISVTAVQLPSFNLTN 62
KH +T S T T+ + F+L++++ L+ T F+P D S SFN
Sbjct: 94 KHTFQTLFSTMTR-KPVFKQTLIIFFVLLLLYALFNTFFQPTDS--STFDSSTFSFNSAT 264
Query: 63 NSTTVNFTFSQYTSVK 78
+S ++ S+ +VK
Sbjct: 265 SSVLLSSAASKSPAVK 312
>AW127141 homologue to GP|18033654|gb| putative nodule membrane protein
{Medicago sativa}, partial (8%)
Length = 405
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 4 HEHETPPSNRTNLASCLVATVFLIFILIIIFTLYFTLF 41
H+++TP + SCL T +F+ + +F L+FT F
Sbjct: 115 HKNKTPFFLSSFYPSCLNQTTPYLFVFLFLFLLFFTNF 228
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.324 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,714,620
Number of Sequences: 36976
Number of extensions: 72551
Number of successful extensions: 795
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of query: 187
length of database: 9,014,727
effective HSP length: 91
effective length of query: 96
effective length of database: 5,649,911
effective search space: 542391456
effective search space used: 542391456
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Medicago: description of AC142526.4