TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC142526.10 + phase: 0 
         (401 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

AJ499348                                                              112  3e-25
TC86960 similar to PIR|C85253|C85253 receptor like protein (part...    44  1e-04
CA989716 weakly similar to GP|19310793|gb| putative ES43 protein...    39  0.003
BQ137811 homologue to GP|18057122|gb| putative hyperpolarization...    30  1.3
BF519264 similar to GP|15293221|gb| unknown protein {Arabidopsis...    30  1.7
CB893592 similar to GP|19310793|gb putative ES43 protein {Arabid...    29  3.7
TC86058 similar to GP|15912261|gb|AAL08264.1 AT4g27720/T29A15_21...    29  3.7
AW694241 similar to GP|18377747|gb unknown protein {Arabidopsis ...    28  4.8
TC83406 weakly similar to GP|19699359|gb|AAL91289.1 At1g79720/F1...    28  4.8
AW776388 similar to GP|21537142|gb| unknown {Arabidopsis thalian...    28  6.3
TC91459 similar to GP|4651202|dbj|BAA77206.1 copper amine oxidas...    28  6.3
TC89482 similar to SP|Q9M3H5|AHM1_ARATH Potential cadmium/zinc-t...    28  6.3
TC89598 weakly similar to GP|20127014|gb|AAM10934.1 putative bHL...    28  6.3
BG585026 similar to GP|9757901|dbj| serine protease-like protein...    28  6.3

>AJ499348 
          Length = 336

 Score =  112 bits (279), Expect = 3e-25
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = -2

Query: 347 NKLGHVEKVEILKGIEDMKDGLRTFLESADSSKPISAADIHQFFDDIKNKRRRVG 401
           NKLGHVEKVEILKGIEDMKDGLRTFLESADSSKPISAADIHQFFDDIKNKRRRVG
Sbjct: 335 NKLGHVEKVEILKGIEDMKDGLRTFLESADSSKPISAADIHQFFDDIKNKRRRVG 171


>TC86960 similar to PIR|C85253|C85253 receptor like protein (partial)
           [imported] - Arabidopsis thaliana, partial (80%)
          Length = 1023

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 25/87 (28%), Positives = 40/87 (45%)
 Frame = +3

Query: 86  EFYCKIFPSKDIENVENSYNHNFKGLYCTCARPYPDPDAEEQIEMIQCCLCEDWFHEEHL 145
           +F+C+     +  +   ++N +   +YC C  PY   D      M+QC  C DWFH   +
Sbjct: 387 DFFCRF----EYNSATGAFNPDRVAVYCKCEMPYNPDDL-----MVQCEGCSDWFHPACI 539

Query: 146 GLESSDEIPRDEEGEPLYEDFMCKACS 172
            +         EE E L + F C++CS
Sbjct: 540 DMTV-------EEAERL-DHFFCESCS 596


>CA989716 weakly similar to GP|19310793|gb| putative ES43 protein
           {Arabidopsis thaliana}, partial (33%)
          Length = 596

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 24/87 (27%), Positives = 41/87 (46%)
 Frame = +1

Query: 86  EFYCKIFPSKDIENVENSYNHNFKGLYCTCARPYPDPDAEEQIEMIQCCLCEDWFHEEHL 145
           +F+C+     +  +   +   +   +YC C  PY +PD      M+QC  C DWFH   +
Sbjct: 19  DFFCRF----NYNSATGALTPDIVQVYCKCEMPY-NPDEV----MVQCDHCTDWFHPACI 171

Query: 146 GLESSDEIPRDEEGEPLYEDFMCKACS 172
            +         EE E + ++F C++CS
Sbjct: 172 DMTV-------EEAERI-DNFSCESCS 228


>BQ137811 homologue to GP|18057122|gb| putative hyperpolarization-activated
           cation channel protein {Oryza sativa (japonica
           cultivar-group)}, partial (7%)
          Length = 1208

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 15/37 (40%), Positives = 20/37 (53%), Gaps = 4/37 (10%)
 Frame = -3

Query: 38  IFSCITCT----PDGNAGVCTACSLSCHDGHQIVELW 70
           IF  ++CT      GNAG C++C  SC  G  +V  W
Sbjct: 216 IFDGLSCTCMI*HFGNAGKCSSCRNSCSSGAPLVVEW 106


>BF519264 similar to GP|15293221|gb| unknown protein {Arabidopsis thaliana},
           partial (7%)
          Length = 416

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 11/17 (64%), Positives = 13/17 (75%)
 Frame = -3

Query: 298 CKNCLEYYHQKRIAFLL 314
           CK CL YYHQ+R  +LL
Sbjct: 399 CKLCLSYYHQRRTNYLL 349


>CB893592 similar to GP|19310793|gb putative ES43 protein {Arabidopsis
           thaliana}, partial (50%)
          Length = 837

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/53 (26%), Positives = 24/53 (44%)
 Frame = +2

Query: 86  EFYCKIFPSKDIENVENSYNHNFKGLYCTCARPYPDPDAEEQIEMIQCCLCED 138
           +F+C+     +  +   ++N +   +YC C  PY   D      M+QC  C D
Sbjct: 221 DFFCRF----EYNSATGAFNPDRVAVYCKCEMPYNPDDL-----MVQCEGCSD 352


>TC86058 similar to GP|15912261|gb|AAL08264.1 AT4g27720/T29A15_210
           {Arabidopsis thaliana}, partial (96%)
          Length = 1979

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 294 ALCKCKNCLEYYHQKRIAFLLDKE 317
           A C CK C+ +YH+ R+   +D+E
Sbjct: 108 AECVCKICVRWYHETRVV*KIDEE 37


>AW694241 similar to GP|18377747|gb unknown protein {Arabidopsis thaliana},
           partial (19%)
          Length = 372

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (52%)
 Frame = -3

Query: 91  IFPSKDIENVENSYNHNFKGLYCTCARPYP 120
           +FPS   E +EN   H +    C+C +P P
Sbjct: 301 LFPSPSYEMLENPSQHPWCSYGCSCQKPVP 212


>TC83406 weakly similar to GP|19699359|gb|AAL91289.1 At1g79720/F19K16_30
           {Arabidopsis thaliana}, partial (51%)
          Length = 1197

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 207 DTPSTCGFEKPLGDTSYNSPKIDVAQASVGSESISN 242
           + PS+C +    GD S+   ++ V   S G  S+SN
Sbjct: 635 NNPSSCNYTVSYGDGSFTDGELGVEHLSFGGISVSN 742


>AW776388 similar to GP|21537142|gb| unknown {Arabidopsis thaliana}, partial
           (14%)
          Length = 485

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 16/51 (31%), Positives = 23/51 (44%), Gaps = 1/51 (1%)
 Frame = +3

Query: 67  VELWT-KRNFRCDCGNSKFGEFYCKIFPSKDIENVENSYNHNFKGLYCTCA 116
           V LW+  RN  C C   K   +YC  F      N ++S++ +   L C  A
Sbjct: 69  VHLWSFSRNSFCGCWKGKMDGYYCNCF-----GNTDSSWDSSILVLLCVPA 206


>TC91459 similar to GP|4651202|dbj|BAA77206.1 copper amine oxidase {Pisum
           sativum}, partial (31%)
          Length = 694

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -1

Query: 81  NSKFGE-FYCKIFPSKDIENVENSYNHNFKGLYCT 114
           NS+F + FY    P+  I  +E + +  FK L+CT
Sbjct: 571 NSQFSQSFYSLFLPNHPIVKLEQTTSERFKPLFCT 467


>TC89482 similar to SP|Q9M3H5|AHM1_ARATH Potential
          cadmium/zinc-transporting ATPase HMA1 (EC 3.6.3.3) (EC
          3.6.3.5). [Mouse-ear cress], partial (41%)
          Length = 1100

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 18/53 (33%), Positives = 26/53 (48%)
 Frame = +2

Query: 37 AIFSCITCTPDGNAGVCTACSLSCHDGHQIVELWTKRNFRCDCGNSKFGEFYC 89
          +I  CI C   G+ G+C +  L C  GH I + WT     C  G + F  ++C
Sbjct: 35 SITMCIGC---GSIGICHSNQLLCKKGH-ITQRWT-----CS-GCTSFVSYHC 163


>TC89598 weakly similar to GP|20127014|gb|AAM10934.1 putative bHLH
           transcription factor {Arabidopsis thaliana}, partial
           (24%)
          Length = 849

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 21/85 (24%), Positives = 41/85 (47%), Gaps = 4/85 (4%)
 Frame = +3

Query: 303 EYYHQKRIAFLLDKEDSIVEYEKMAKQKREEKLQQQEGAELSLFNKLGHVEKVEIL---- 358
           +YY ++     +++         +A++KR EKL Q+  A  S+   L  ++K  IL    
Sbjct: 477 DYYKRENKVSAVNRNPMQARDHVIAERKRREKLSQRFIALSSILPGLKKMDKATILEDAI 656

Query: 359 KGIEDMKDGLRTFLESADSSKPISA 383
           K ++ +++ ++T  E     K  SA
Sbjct: 657 KHMKQLQERVKTLEEQVADKKVESA 731


>BG585026 similar to GP|9757901|dbj| serine protease-like protein
           {Arabidopsis thaliana}, partial (10%)
          Length = 438

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 66  IVELWTKRNFRCDCGNSKFGEFYCK 90
           I + W  RN  C C   K+  ++C+
Sbjct: 301 IKKCWCSRNIHCSCSEPKWDHYFCE 375


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.319    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,771,402
Number of Sequences: 36976
Number of extensions: 284509
Number of successful extensions: 1404
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of query: 401
length of database: 9,014,727
effective HSP length: 98
effective length of query: 303
effective length of database: 5,391,079
effective search space: 1633496937
effective search space used: 1633496937
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)