BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142222.3 + phase: 0
(326 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed prot... 42 4e-04
TC76402 weakly similar to GP|18086561|gb|AAL57705.1 At2g01100/F2... 42 4e-04
BG644407 similar to GP|12697612|dbj contains ESTs C97999(C0353) ... 41 7e-04
TC87729 similar to GP|9759461|dbj|BAB10377.1 gene_id:MAF19.15~un... 37 0.010
BQ137346 homologue to GP|15027095|em hypothetical protein LT.09 ... 34 0.067
TC88031 similar to PIR|E84706|E84706 hypothetical protein At2g30... 34 0.088
TC90482 33 0.15
TC86029 homologue to GP|5802244|gb|AAD51625.1| seed maturation p... 32 0.26
TC77925 similar to GP|18700163|gb|AAL77693.1 AT4g02720/T10P11_1 ... 32 0.33
TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like... 31 0.57
TC78248 similar to GP|16323192|gb|AAL15330.1 At2g47330/T8I13.17 ... 31 0.57
TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E... 31 0.75
AL385482 similar to GP|5106924|gb|A putative cell wall protein {... 31 0.75
TC77438 homologue to PIR|T06807|T06807 nucleosome assembly prote... 31 0.75
BG645103 31 0.75
TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {... 30 0.97
TC85559 similar to PIR|T07012|T07012 acetyl-CoA carboxylase (EC ... 30 1.3
AJ498363 similar to GP|16604364|gb| AT5g39570/MIJ24_40 {Arabidop... 30 1.3
TC77840 weakly similar to GP|9294391|dbj|BAB02401.1 cytochrome P... 30 1.7
TC82135 30 1.7
>TC93234 weakly similar to GP|21751020|dbj|BAC03887. unnamed protein product
{Homo sapiens}, partial (11%)
Length = 591
Score = 41.6 bits (96), Expect = 4e-04
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Frame = +3
Query: 13 TSVSQARRARQSAGAFTSVSQARRGHPRYDDDHSLDEFLADRRRKKHLALRRHPHYDDDY 72
+ + + R Q+ + + Q +GHPR D L E R LRRHP D
Sbjct: 147 SGLRRPRHRSQAPQVYPAKGQGPQGHPRLALDTPLLELRRRSRSHPRRVLRRHPLQPDQA 326
Query: 73 SLDEIFPNR-----RQKHQAHKRHYHYDDEDSLDSLLPKQHQAERGH 114
+ ++ P R RQ H RH H D + + + +A H
Sbjct: 327 RVRQVPPGRLRLRSRQGHLLRPRHQHRSGRDQRRAQVHRVRRARHRH 467
>TC76402 weakly similar to GP|18086561|gb|AAL57705.1 At2g01100/F23H14.7
{Arabidopsis thaliana}, partial (43%)
Length = 1449
Score = 41.6 bits (96), Expect = 4e-04
Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 23/190 (12%)
Frame = +3
Query: 43 DDHSLDEFLADRRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHYDDED---- 98
D + ++ L + KK D D DE ++ H+ H++H H D D
Sbjct: 780 DAEAKEKKLKTAKHKKRSGSDTDSDRDSD---DERKRASKRSHRKHRKHSHIDSGDHEKR 950
Query: 99 --SLDSLLPKQHQAERGHTRYDDEDSLDEVLPKQRQAKRGRSHYDDDDS----------L 146
K+ +E D+ +S E ++R+ K+ R D DS
Sbjct: 951 KEKSSKWKTKKRSSESSDFSSDESESSSE--EEKRRKKKQRKKIRDQDSRSNSSGSDSYA 1124
Query: 147 DEVLPKQHHAKRGHPH-------YDDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPK 199
DEV ++ +R P Y D+ + D + KRH H ++ E L D +
Sbjct: 1125DEVNKRKRRHRRRRPSKFSDSDFYSDEGECSDRKRGHGKHHKRHRHSESSESDLSSD--E 1298
Query: 200 NHQAKRGRSH 209
+ R RSH
Sbjct: 1299SDDIHRKRSH 1328
>BG644407 similar to GP|12697612|dbj contains ESTs C97999(C0353)
D15249(C0353)~similar to Arabidopsis thaliana chromosome
2 At2g01100~, partial (21%)
Length = 764
Score = 40.8 bits (94), Expect = 7e-04
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 16/110 (14%)
Frame = +2
Query: 69 DDDYSLDEIFPNRRQKHQAHKRHYHYDDEDSLD--------SLLPKQHQAERGHT--RYD 118
D D F ++ ++HK+H + D +D PK+ ++ G R
Sbjct: 392 DSGSDTDSEFEKKKSTRKSHKKHRKHHSSDLVDLDRKDKKSKRKPKRRSSDSGDDSCREY 571
Query: 119 DEDSLDEVLPKQRQAKRGRSH--YDD----DDSLDEVLPKQHHAKRGHPH 162
D DS +E K+R K+ R H Y D D S DE + K+HH+K H
Sbjct: 572 DGDSEEERRRKKRGHKKHRHHDRYSDYNSSDSSDDEDVGKKHHSKHHKRH 721
Score = 36.2 bits (82), Expect = 0.018
Identities = 37/142 (26%), Positives = 51/142 (35%), Gaps = 25/142 (17%)
Frame = +2
Query: 9 AGAFTSVSQARRARQSAG--------AFTSVSQARRGHPRYDDDHSLDEFLADRRRKK-- 58
AG T ++ RR S F R+ H ++ HS D DR+ KK
Sbjct: 338 AGEKTKAAKHRRKSDSGSDSGSDTDSEFEKKKSTRKSHKKHRKHHSSDLVDLDRKDKKSK 517
Query: 59 HLALRRHPHYDDDYSLD---EIFPNRRQKHQAHKRHYHY------------DDEDSLDSL 103
RR DD + + RR+K + HK+H H+ DDED
Sbjct: 518 RKPKRRSSDSGDDSCREYDGDSEEERRRKKRGHKKHRHHDRYSDYNSSDSSDDEDVGKKH 697
Query: 104 LPKQHQAERGHTRYDDEDSLDE 125
K H+ R E S D+
Sbjct: 698 HSKHHKRHRRSQPNGSESSSDD 763
Score = 28.1 bits (61), Expect = 4.8
Identities = 32/176 (18%), Positives = 54/176 (30%), Gaps = 4/176 (2%)
Frame = +2
Query: 129 KQRQAKRGRSHYDDDDSLDEVLPKQHHAKRGHPHYDDDDDLPDGVLPKQQAKKRHP---- 184
K Q ++ D E H ++ D D K+ +K H
Sbjct: 287 KWEQKLEASANLKSDAEAGEKTKAAKHRRKSDSGSDSGSDTDSEFEKKKSTRKSHKKHRK 466
Query: 185 HYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPHYDNDGDSLHED 244
H+ +D L K+ + + RS +D+ + YD D +
Sbjct: 467 HHSSDLVDLDRKDKKSKRKPKRRSSDSGDDSCRE---------------YDGDSEEERRR 601
Query: 245 LPKNHQAERGQPRYDDDDDLPDGVLPKQRQAKKLHPHYDNDEDSLHEDLPKNHQAK 300
+ H+ R RY D Y++ + S ED+ K H +K
Sbjct: 602 KKRGHKKHRHHDRYSD---------------------YNSSDSSDDEDVGKKHHSK 706
>TC87729 similar to GP|9759461|dbj|BAB10377.1 gene_id:MAF19.15~unknown protein
{Arabidopsis thaliana}, partial (37%)
Length = 2210
Score = 37.0 bits (84), Expect = 0.010
Identities = 37/153 (24%), Positives = 69/153 (44%), Gaps = 4/153 (2%)
Frame = +3
Query: 174 LPKQQAKKRHPHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPH 233
LP ++ + Y +DE R S Y+ ED+ + ++P+++ R
Sbjct: 1557 LPPAKSSRHQVGYPDDE--------------RDESEYETEDDEEE----ERPRSRMR--- 1673
Query: 234 YDNDGDSLHEDLPKNHQAERGQPRYDDDDDLPDGVLPK----QRQAKKLHPHYDNDEDSL 289
D+D ++ +ED ++ Q E+ D+D+D +G+ K +R+AKK +D+DE S
Sbjct: 1674 -DDDSEAEYEDEEEDEQIEQENDASDEDED--EGLKQKSKNLKRKAKK--KGFDSDEGSP 1838
Query: 290 HEDLPKNHQAKRGRPLYDDTDSLDEVLPARRRR 322
P H+ DD + D + R+ +
Sbjct: 1839 PPKKPTTHRRMTIMSDSDDE*NSDLTIGIRKEK 1937
Score = 34.3 bits (77), Expect = 0.067
Identities = 30/108 (27%), Positives = 45/108 (40%), Gaps = 3/108 (2%)
Frame = +3
Query: 111 ERGHTRYDDEDSLDEVLPKQRQAKRGRSHYDDDDSLDEVLPKQHHAKRGHPHYDDDDDLP 170
ER + Y+ ED +E +R RS DDDS E ++ + + D+D
Sbjct: 1605 ERDESEYETEDDEEE--------ERPRSRMRDDDSEAEYEDEEEDEQIEQENDASDEDED 1760
Query: 171 DGVLPKQQAKKRHPH---YDNDEDSLHEDLPKNHQAKRGRSHYDVEDN 215
+G+ K + KR +D+DE S P H+ S D E N
Sbjct: 1761 EGLKQKSKNLKRKAKKKGFDSDEGSPPPKKPTTHRRMTIMSDSDDE*N 1904
>BQ137346 homologue to GP|15027095|em hypothetical protein LT.09 {Leishmania
major}, partial (0%)
Length = 1101
Score = 34.3 bits (77), Expect = 0.067
Identities = 44/195 (22%), Positives = 71/195 (35%), Gaps = 11/195 (5%)
Frame = +3
Query: 80 NRRQKHQAHKRHYHYDDEDSLDSLLPKQHQAERGHTRYDDEDSLDEVLP---KQRQA--K 134
N R+K Q R +E++ D + + ER R ++DS E P +QR +
Sbjct: 495 NDRKKKQPASRGRA--EEENEDKNRHNRARDERHDARTHEKDSRTEQTPTHTRQRHTTKR 668
Query: 135 RGRSHYDDDDSLDEVLPKQH-HAKRGHPHYDDDDDLPDGVLPKQQAKKRHPHYDNDEDSL 193
R R H ++ +E P +R P PK + R DE
Sbjct: 669 RTRRHEPEEAHTEETTPTTRTKTRRPQP-------------PKPTKRGRGQAQAPDEKKR 809
Query: 194 HEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPHYDNDGDSLHEDLPKNHQAER 253
+ ++ + + R H + D+ K+P A + HPH + D Q R
Sbjct: 810 ATEQNESEREENTRRHTETHDD-------KRPTAAREHPHNTRETTKRRRDKSAEKQETR 968
Query: 254 GQPR-----YDDDDD 263
+ R + DD D
Sbjct: 969 ERTRRHTTTHTDDQD 1013
>TC88031 similar to PIR|E84706|E84706 hypothetical protein At2g30280
[imported] - Arabidopsis thaliana, partial (11%)
Length = 1443
Score = 33.9 bits (76), Expect = 0.088
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = +1
Query: 93 HYDDEDSLDSLLPKQHQAERGHTRYDDEDSLDEVLPKQRQAKR--GRSHY--DDDDSLDE 148
++D D+ D + + Y DE S DE + + + G S+ DDD+ +D+
Sbjct: 805 YFDGPDNSDYETDDSNAEDNPMNDYPDEISEDEGSECESEESKHSGSSNELSDDDEDVDD 984
Query: 149 VLPKQHHAKRGHPHYDDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKNH 201
L + P YD+D D +G + YDNDED ED+ H
Sbjct: 985 ELRRFAKGLTSDPLYDEDFDDYEG---------QGVGYDNDEDG-DEDVGNEH 1113
>TC90482
Length = 454
Score = 33.1 bits (74), Expect = 0.15
Identities = 38/151 (25%), Positives = 59/151 (38%), Gaps = 1/151 (0%)
Frame = +2
Query: 154 HHAKRGHPHY-DDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKNHQAKRGRSHYDV 212
H H Y + D D G + ++ R YD+ E S HE P G D
Sbjct: 11 HERDVEHDRYREKDKDYEVGETDRGRSHDRGADYDHVE-SKHEKEP------HGEIERDY 169
Query: 213 EDNLLDGVLPKQPQAKKRHPHYDNDGDSLHEDLPKNHQAERGQPRYDDDDDLPDGVLPKQ 272
E + G K+P RH ++D D + +++ +RG+ +YD+ DD D
Sbjct: 170 EPDDHHGRY-KEPGHGHRHADPEHDPDHYN-----HYEHQRGRGQYDEGDDRGD------ 313
Query: 273 RQAKKLHPHYDNDEDSLHEDLPKNHQAKRGR 303
+P + ED H + K+ R R
Sbjct: 314 ---YNQYPDHAKMEDDHHTERAKSKSRDRDR 397
Score = 31.6 bits (70), Expect = 0.44
Identities = 35/131 (26%), Positives = 47/131 (35%), Gaps = 3/131 (2%)
Frame = +2
Query: 38 HPRY---DDDHSLDEFLADRRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHY 94
H RY D D+ + E DR R R YD S E ++ H +R Y
Sbjct: 29 HDRYREKDKDYEVGE--TDRGRSHD----RGADYDHVESKHE-----KEPHGEIERDYEP 175
Query: 95 DDEDSLDSLLPKQHQAERGHTRYDDEDSLDEVLPKQRQAKRGRSHYDDDDSLDEVLPKQH 154
DD + + GH D E D + Q RGR YD+ D +
Sbjct: 176 DDHHG------RYKEPGHGHRHADPEHDPDHYNHYEHQ--RGRGQYDEGDDRGDYNQYPD 331
Query: 155 HAKRGHPHYDD 165
HAK H+ +
Sbjct: 332 HAKMEDDHHTE 364
>TC86029 homologue to GP|5802244|gb|AAD51625.1| seed maturation protein PM37
{Glycine max}, complete
Length = 1572
Score = 32.3 bits (72), Expect = 0.26
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +1
Query: 217 LDGVLPKQPQAKKRHPHYDN-DGDSLH----EDLPKNHQAERGQPRYDDDDDLPDG 267
L+ VLP +P ++ D + +LH E+ + Q ++ Q YD+DDD+P G
Sbjct: 1141 LEAVLPAKPSSQLTDMEIDECEETTLHDVNMEEENRRKQQQQQQEAYDEDDDMPGG 1308
>TC77925 similar to GP|18700163|gb|AAL77693.1 AT4g02720/T10P11_1
{Arabidopsis thaliana}, partial (47%)
Length = 1538
Score = 32.0 bits (71), Expect = 0.33
Identities = 49/266 (18%), Positives = 101/266 (37%), Gaps = 6/266 (2%)
Frame = +3
Query: 63 RRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHYDDEDSLDSLLPKQHQAERGHTRYDDEDS 122
+RH H D + D N R +++ + YDD R+ D
Sbjct: 69 QRHRHNDRRRTPDSDVSNDRPRYRRSPSYDSYDD-------------------RHTDRHR 191
Query: 123 LDEVLPKQRQAKRGRSHYDDDDSLDEVLPKQHHAKRGHPHYDDDDDLPDGVLPKQQAKKR 182
+ P+ R + H+D+ +S LPK+ + + D +D R
Sbjct: 192 RRSISPENRNPR----HHDNGNSNGNHLPKKFGHRNNGSYLDRND-------------SR 320
Query: 183 HPHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPHYDNDGDSLH 242
++DE+ + + KR + ++ + + V P P+ + + +
Sbjct: 321 RNESESDEELKGLSYEEYRRLKRQKMRKSLK-HCIWNVTPSPPRRENDDLEDYGKPEEIS 497
Query: 243 E--DLPKN---HQAERGQPRYDDDDDLPDGVLPKQRQAKKLHPHYDNDEDSLHE-DLPKN 296
E D+ K+ Q + + ++ + + K+R++ K D++ +S E + K
Sbjct: 498 EIIDVKKDKEIKQKAKSESESEESKESDSELRKKRRKSYKKSRESDSESESESEVEDRKR 677
Query: 297 HQAKRGRPLYDDTDSLDEVLPARRRR 322
++++ DT+S +E RRRR
Sbjct: 678 RKSRKYSESDSDTNSEEEDRKRRRRR 755
>TC80366 similar to GP|13877617|gb|AAK43886.1 protein kinase-like protein
{Arabidopsis thaliana}, partial (16%)
Length = 814
Score = 31.2 bits (69), Expect = 0.57
Identities = 24/78 (30%), Positives = 32/78 (40%)
Frame = +1
Query: 33 QARRGHPRYDDDHSLDEFLADRRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRHY 92
Q RR H R H L L + HL R H H+ + +HQ +R++
Sbjct: 43 QLRRIHHR--SPHLLRLLLPRQHLHHHLRRRLHQHHHHQH-----LQIHHPRHQQLRRYH 201
Query: 93 HYDDEDSLDSLLPKQHQA 110
H +E L LP HQA
Sbjct: 202 HRPEEALLRLHLPGLHQA 255
>TC78248 similar to GP|16323192|gb|AAL15330.1 At2g47330/T8I13.17
{Arabidopsis thaliana}, partial (79%)
Length = 2745
Score = 31.2 bits (69), Expect = 0.57
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 30/111 (27%)
Frame = +3
Query: 207 RSHYDVEDNLLDGVLPKQPQAKKRHPHYDNDG-----------------DSLHEDL---P 246
+SH + EDN LD + +++ + DN G + +HE++ P
Sbjct: 315 KSHDNFEDNDLDNIEYDDDSREEQSNNDDNAGGGGGGEEDEIDPLDAFMEGIHEEMKSAP 494
Query: 247 KNHQAERGQPRYDDDDDLPDGVLPKQRQAKK----------LHPHYDNDED 287
E+ + RY DDL D + +AKK LH YD+DE+
Sbjct: 495 PPKPKEKVEDRY--KDDLEDDPMESFLRAKKDLGLTLASDALHAGYDSDEE 641
>TC86766 weakly similar to PIR|T06291|T06291 extensin homolog T9E8.80 -
Arabidopsis thaliana, partial (18%)
Length = 1260
Score = 30.8 bits (68), Expect = 0.75
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 54 RRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHY 94
+R KHL HPH+ + I P+R ++ H H+ Y
Sbjct: 351 QRHIKHLITHHHPHHHHHHQYMPI-PHRHHRYTPHPHHHQY 470
>AL385482 similar to GP|5106924|gb|A putative cell wall protein {Medicago
truncatula}, partial (42%)
Length = 402
Score = 30.8 bits (68), Expect = 0.75
Identities = 20/77 (25%), Positives = 36/77 (45%)
Frame = +3
Query: 174 LPKQQAKKRHPHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPH 233
LPK K + H+ +E H ++HQ + H+ E++ D +Q Q +++ PH
Sbjct: 30 LPKMLLKVK*LHHQQEE---HHHQEEHHQQEE---HHHQEEHQQDHHQKEQHQHQRKRPH 191
Query: 234 YDNDGDSLHEDLPKNHQ 250
+H+ L + HQ
Sbjct: 192 LLQVEQRVHQLLQQEHQ 242
Score = 28.9 bits (63), Expect = 2.8
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +3
Query: 152 KQHHAKRGHPHYDDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKNHQAKRGRSHYD 211
++HH + H H+ ++ + Q +++ PH E +H+ L + HQ + +H
Sbjct: 93 EEHHQQEEH-HHQEEHQQDHHQKEQHQHQRKRPHLLQVEQRVHQLLQQEHQEAQLPNHQQ 269
Query: 212 VE 213
E
Sbjct: 270 QE 275
>TC77438 homologue to PIR|T06807|T06807 nucleosome assembly protein 1 -
garden pea, partial (93%)
Length = 1607
Score = 30.8 bits (68), Expect = 0.75
Identities = 21/101 (20%), Positives = 42/101 (40%), Gaps = 7/101 (6%)
Frame = +2
Query: 184 PHYDNDEDSLHEDLPKNHQAKRGRSHYDVEDNLLDGVLPK-------QPQAKKRHPHYDN 236
P D++ + ED+ + Q + + YD+ + D ++P + + D+
Sbjct: 866 PEVPEDDEDIDEDMAEELQNQMEQD-YDIGSTIRDKIIPHAVSWFTGEAAQGEEFGDLDD 1042
Query: 237 DGDSLHEDLPKNHQAERGQPRYDDDDDLPDGVLPKQRQAKK 277
+ D +D + + E DDD+D + K+ AKK
Sbjct: 1043EDDDEDDDAEDDDEDEDEDEDEDDDEDEEETKTKKKSSAKK 1165
>BG645103
Length = 757
Score = 30.8 bits (68), Expect = 0.75
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 157 KRGHPHYDDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKN 200
+RG ++D+ DG L + YDND ++LH+ LP N
Sbjct: 379 ERGKKPISLENDVEDGDLINTDFWFNYGSYDNDNNNLHDKLPHN 248
Score = 28.1 bits (61), Expect = 4.8
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 204 KRGRSHYDVEDNLLDGVLPKQPQAKKRHPHYDNDGDSLHEDLPKN 248
+RG+ +E+++ DG L + YDND ++LH+ LP N
Sbjct: 379 ERGKKPISLENDVEDGDLINT-DFWFNYGSYDNDNNNLHDKLPHN 248
Score = 27.3 bits (59), Expect = 8.2
Identities = 16/45 (35%), Positives = 24/45 (52%)
Frame = -1
Query: 252 ERGQPRYDDDDDLPDGVLPKQRQAKKLHPHYDNDEDSLHEDLPKN 296
ERG+ ++D+ DG L + YDND ++LH+ LP N
Sbjct: 379 ERGKKPISLENDVEDGDLINTDFWFN-YGSYDNDNNNLHDKLPHN 248
>TC80893 similar to GP|4557063|gb|AAD22502.1| expressed protein {Arabidopsis
thaliana}, partial (39%)
Length = 883
Score = 30.4 bits (67), Expect = 0.97
Identities = 24/88 (27%), Positives = 34/88 (38%)
Frame = +3
Query: 95 DDEDSLDSLLPKQHQAERGHTRYDDEDSLDEVLPKQRQAKRGRSHYDDDDSLDEVLPKQH 154
D +D D + + + G D ED P+ A DDDD DE
Sbjct: 354 DVQDEDDDGEEEDYSGDEGEEEGDPEDD-----PEANGAGGSDDGEDDDDDGDE-----E 503
Query: 155 HAKRGHPHYDDDDDLPDGVLPKQQAKKR 182
+ G D++D+ D P+ AKKR
Sbjct: 504 DEEDGEDEEDEEDEEEDDETPQPPAKKR 587
>TC85559 similar to PIR|T07012|T07012 acetyl-CoA carboxylase (EC 6.4.1.2) -
potato chloroplast, partial (66%)
Length = 5011
Score = 30.0 bits (66), Expect = 1.3
Identities = 33/153 (21%), Positives = 51/153 (32%), Gaps = 4/153 (2%)
Frame = +3
Query: 141 DDDDSLDEVLPKQHHAKRGHPHYDDDDDLPDGVLPKQQAKKRHPHYDNDEDSLHEDLPKN 200
+DDD L + +Y D D+ D DND D ++ L K
Sbjct: 2733 NDDDKLQKASDILEPVNYSAENYSDSDNDSD---------------DNDPDDDYDTLQKG 2867
Query: 201 HQAKRGRSHYDVEDNLLDGVLPKQPQAKKRHPHY----DNDGDSLHEDLPKNHQAERGQP 256
+ D +D K + HY +ND D+ +D P +
Sbjct: 2868 TDTLEPENDNDTDD-----------YDKIQRAHYILEPENDSDTEPDDEPDYEPDDEPDD 3014
Query: 257 RYDDDDDLPDGVLPKQRQAKKLHPHYDNDEDSL 289
DDDD L Q+ + L P +D + +
Sbjct: 3015 EPDDDDKL-------QKASDILEPENPSDSEKV 3092
>AJ498363 similar to GP|16604364|gb| AT5g39570/MIJ24_40 {Arabidopsis
thaliana}, partial (16%)
Length = 549
Score = 30.0 bits (66), Expect = 1.3
Identities = 25/113 (22%), Positives = 43/113 (37%), Gaps = 19/113 (16%)
Frame = +2
Query: 75 DEIFPNRRQKHQAHKRHYHYDDEDSLDSLLPKQHQAERGHTRYDDED------------S 122
+E P+ + K Y D++ S +++ + + R DDE+ S
Sbjct: 14 EEEKPSYGRSEYERKPSYGRSDDEEKPSYGRTEYERKPSYGRSDDEEKPSYGRKTSYGRS 193
Query: 123 LDEVLPKQRQAKRG-------RSHYDDDDSLDEVLPKQHHAKRGHPHYDDDDD 168
DE P +RG R Y +D D+ ++ H + H H DD+
Sbjct: 194 DDEEKPSYGSERRGDDDEGYGRKKYGGNDGSDDDEGRKKHHHKSHHHKSYDDE 352
>TC77840 weakly similar to GP|9294391|dbj|BAB02401.1 cytochrome P450
{Arabidopsis thaliana}, partial (61%)
Length = 1816
Score = 29.6 bits (65), Expect = 1.7
Identities = 19/59 (32%), Positives = 29/59 (48%), Gaps = 1/59 (1%)
Frame = +1
Query: 103 LLPKQHQAERGHTRYDDEDSLDEVLPKQRQA-KRGRSHYDDDDSLDEVLPKQHHAKRGH 160
LLP + D DSL+ ++ K+ +A K G + +DD L +L H K+GH
Sbjct: 883 LLPTTAERRMKEIERDIRDSLEGIIEKREEALKNGEA--TNDDLLGILLQSNHAEKQGH 1053
>TC82135
Length = 955
Score = 29.6 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -2
Query: 50 FLADRRRKKHLALRRHPHYDDDYSLDEIFPNRRQKHQAHKRHYHYDDEDS 99
F A R + H+ + HPH D + I P+R++K A + H D+ S
Sbjct: 843 FKAARNKISHIDIDSHPHVYDSEIQNPIEPDRKKK*IALESH*QIDNSKS 694
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.314 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,209,250
Number of Sequences: 36976
Number of extensions: 197271
Number of successful extensions: 1054
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of query: 326
length of database: 9,014,727
effective HSP length: 96
effective length of query: 230
effective length of database: 5,465,031
effective search space: 1256957130
effective search space used: 1256957130
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC142222.3