TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC142096.4 - phase: 0 /pseudo
         (213 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC92260 homologue to GP|15912211|gb|AAL08239.1 At2g31160/T16B12....   306  4e-84
TC87444 similar to GP|21555695|gb|AAM63916.1 unknown {Arabidopsi...   256  6e-69
TC78449 similar to GP|21555695|gb|AAM63916.1 unknown {Arabidopsi...   252  9e-68
TC90792 similar to GP|4559331|gb|AAD22993.1| expressed protein {...   222  7e-59
TC78034 similar to GP|21592379|gb|AAM64330.1 unknown {Arabidopsi...   218  1e-57
TC84562 homologue to GP|15912211|gb|AAL08239.1 At2g31160/T16B12....   188  2e-48
TC89208 homologue to GP|15912211|gb|AAL08239.1 At2g31160/T16B12....    90  7e-19
TC89209 homologue to GP|15912211|gb|AAL08239.1 At2g31160/T16B12....    87  4e-18
AL379566 homologue to GP|15912211|gb| At2g31160/T16B12.3 {Arabid...    74  5e-14
BQ750934 similar to PIR|T19673|T19 hypothetical protein C33B4.3 ...    37  0.004
TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Ar...    37  0.004
TC86742 similar to PIR|T01541|T01541 hypothetical protein A_IG00...    37  0.006
TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome...    37  0.007
TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Atel...    36  0.013
TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - ...    36  0.013
TC85487 homologue to SP|P49688|RS2_ARATH 40S ribosomal protein S...    35  0.016
TC93086 similar to PIR|F96695|F96695 hypothetical protein F5A8.8...    35  0.021
TC81307 weakly similar to GP|4335772|gb|AAD17449.1| unknown prot...    35  0.021
TC78402 weakly similar to PIR|B84853|B84853 hypothetical protein...    35  0.028
TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~un...    35  0.028

>TC92260 homologue to GP|15912211|gb|AAL08239.1 At2g31160/T16B12.3
           {Arabidopsis thaliana}, partial (60%)
          Length = 842

 Score =  306 bits (784), Expect = 4e-84
 Identities = 152/202 (75%), Positives = 168/202 (82%)
 Frame = +1

Query: 5   QEFESSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           +EF SS++ K++      IN TN ++S      S+ T+S+SS+       P  T+T T S
Sbjct: 1   EEFNSSSSTKNI------INFTNTTTSEDNKNISNFTSSSSSAV------PPATNTNTLS 144

Query: 65  RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTLICPFYGHP 124
           RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVH+ ICPF+GHP
Sbjct: 145 RYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHSQICPFFGHP 324

Query: 125 NPPASCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKAR 184
           NPPA CPCPLRQAWGSLDALIGRLRAAFEENGGKPE NPFGARAVRL+LREVRDSQ+KAR
Sbjct: 325 NPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEDNPFGARAVRLFLREVRDSQSKAR 504

Query: 185 GISYEKKKRKRPPQPPPPPPSN 206
           GISYEKKKRKRP   PPPPPSN
Sbjct: 505 GISYEKKKRKRPQIQPPPPPSN 570


>TC87444 similar to GP|21555695|gb|AAM63916.1 unknown {Arabidopsis
           thaliana}, partial (68%)
          Length = 1607

 Score =  256 bits (653), Expect = 6e-69
 Identities = 118/160 (73%), Positives = 136/160 (84%)
 Frame = +2

Query: 37  PSSSTTSASSSSTATTSPPSTTSTTTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGA 96
           P  S  S +   TA   P S+ +T TPSRYE+QKRRDWNTF QYLRNH+PPL+L+ CSGA
Sbjct: 533 PPPSIPSETPPETAQPQP-SSPATPTPSRYESQKRRDWNTFQQYLRNHKPPLTLALCSGA 709

Query: 97  HVLEFLRYLDQFGKTKVHTLICPFYGHPNPPASCPCPLRQAWGSLDALIGRLRAAFEENG 156
           HV+EFL+YLDQFGKTKVH + CP++G PNPP+ C CPL+QAWGSLDALIGRLRAAFEENG
Sbjct: 710 HVIEFLKYLDQFGKTKVHVIGCPYFGQPNPPSPCACPLKQAWGSLDALIGRLRAAFEENG 889

Query: 157 GKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRP 196
           GKPE+NPFG RAVR+YLREV+D QAKARG+ YEKKKRKRP
Sbjct: 890 GKPESNPFGTRAVRIYLREVKDGQAKARGVPYEKKKRKRP 1009


>TC78449 similar to GP|21555695|gb|AAM63916.1 unknown {Arabidopsis
           thaliana}, partial (70%)
          Length = 1031

 Score =  252 bits (643), Expect = 9e-68
 Identities = 121/175 (69%), Positives = 139/175 (79%), Gaps = 11/175 (6%)
 Frame = +2

Query: 33  TMTIPSSSTTSASSSS--TATTSPPSTTST---------TTPSRYENQKRRDWNTFGQYL 81
           T+  PSS    A S    ++TTSPP                PSRYE+QKRRDWNTF QYL
Sbjct: 197 TIMDPSSEGAGAPSEQLPSSTTSPPIVVQPEGSSPAPPPAPPSRYESQKRRDWNTFLQYL 376

Query: 82  RNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTLICPFYGHPNPPASCPCPLRQAWGSL 141
           +NH+PPL+L RCSGAHV+EFL+YLDQFGKTKVH   CP++GHPNPPA C CPL+QAWGSL
Sbjct: 377 QNHKPPLTLVRCSGAHVIEFLKYLDQFGKTKVHVSGCPYFGHPNPPAPCACPLKQAWGSL 556

Query: 142 DALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKRP 196
           DALIGRLRAA+EENGG+PE+NPFGA+AVR+YLREVR+ QAKARGI YEKKKRKRP
Sbjct: 557 DALIGRLRAAYEENGGRPESNPFGAKAVRIYLREVREGQAKARGIPYEKKKRKRP 721


>TC90792 similar to GP|4559331|gb|AAD22993.1| expressed protein {Arabidopsis
           thaliana}, partial (74%)
          Length = 710

 Score =  222 bits (566), Expect = 7e-59
 Identities = 107/168 (63%), Positives = 131/168 (77%), Gaps = 1/168 (0%)
 Frame = +2

Query: 29  SSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTP-SRYENQKRRDWNTFGQYLRNHRPP 87
           S +M+ ++ + +  ++SSSS    S    T+   P SRYE+QK+RDWNTFGQYLRN  PP
Sbjct: 50  SPTMSSSMQNDTVQASSSSSRPGGSDQQPTAAVAPLSRYESQKKRDWNTFGQYLRNQSPP 229

Query: 88  LSLSRCSGAHVLEFLRYLDQFGKTKVHTLICPFYGHPNPPASCPCPLRQAWGSLDALIGR 147
           +SLS+C+  HVLEFLRYL QFGKTKVH   C F+G P+PPA C CPLRQAWGSLDALIGR
Sbjct: 230 VSLSQCNFNHVLEFLRYLHQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGR 409

Query: 148 LRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKARGISYEKKKRKR 195
           LRAA+EE+GG PE NPFG  A+R+YLREV++ Q+KARGI Y KKK+KR
Sbjct: 410 LRAAYEEHGGSPENNPFGTGAIRVYLREVKECQSKARGIPYTKKKKKR 553


>TC78034 similar to GP|21592379|gb|AAM64330.1 unknown {Arabidopsis
           thaliana}, partial (73%)
          Length = 947

 Score =  218 bits (556), Expect = 1e-57
 Identities = 100/132 (75%), Positives = 113/132 (84%)
 Frame = +1

Query: 64  SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTLICPFYGH 123
           SRYE+QKRRDWNTFGQYLRN RPP++LS C+  HVLEFLRYLDQFGKTKVH   C F+G 
Sbjct: 196 SRYESQKRRDWNTFGQYLRNQRPPVALSNCNSNHVLEFLRYLDQFGKTKVHLQGCLFFGQ 375

Query: 124 PNPPASCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDSQAKA 183
             PP  C CPL+QAWGSLDALIGRLRAA+EENGG PE NPF + ++R+YLREVRDSQAKA
Sbjct: 376 TEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGSIRIYLREVRDSQAKA 555

Query: 184 RGISYEKKKRKR 195
           RGI Y+KKK+KR
Sbjct: 556 RGIPYKKKKKKR 591


>TC84562 homologue to GP|15912211|gb|AAL08239.1 At2g31160/T16B12.3
           {Arabidopsis thaliana}, partial (36%)
          Length = 542

 Score =  188 bits (477), Expect = 2e-48
 Identities = 93/141 (65%), Positives = 106/141 (74%)
 Frame = +1

Query: 1   MNSLQEFESSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTST 60
           M+S+Q+F  S N+             N  S    TI ++S+ +  S++   +S PS  ST
Sbjct: 88  MDSIQDFMDSCNSD------------NSCSLTNSTITTNSSNNNISNAIVGSSSPSG-ST 228

Query: 61  TTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTLICPF 120
           TT SRYENQKRRDWNTFGQYL+NHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHT ICPF
Sbjct: 229 TTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPF 408

Query: 121 YGHPNPPASCPCPLRQAWGSL 141
           YGHPNPPA CPCPLRQAWG+L
Sbjct: 409 YGHPNPPAPCPCPLRQAWGNL 471


>TC89208 homologue to GP|15912211|gb|AAL08239.1 At2g31160/T16B12.3
           {Arabidopsis thaliana}, partial (17%)
          Length = 678

 Score = 89.7 bits (221), Expect = 7e-19
 Identities = 47/97 (48%), Positives = 66/97 (67%), Gaps = 3/97 (3%)
 Frame = +1

Query: 1   MNSLQEFESSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTST 60
           M+S+QEF  + NN+++   N M N  N + S T T  +++TT+AS SS+++ +     S 
Sbjct: 376 MDSIQEFIGTCNNENL-TCNFMNNNNNNTISTTTTSLTTTTTTASGSSSSSAASTIINSP 552

Query: 61  TTPSRYENQKRRDWNTFGQYLRNHRP---PLSLSRCS 94
            + SRYENQKRRDWNTFGQYL+NHRP   PL + RC+
Sbjct: 553 NSSSRYENQKRRDWNTFGQYLKNHRPPFFPLQVQRCT 663



 Score = 30.4 bits (67), Expect = 0.53
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 89  SLSRCSGAHVLEF 101
           SLSRCSGAHVLEF
Sbjct: 638 SLSRCSGAHVLEF 676


>TC89209 homologue to GP|15912211|gb|AAL08239.1 At2g31160/T16B12.3
           {Arabidopsis thaliana}, partial (21%)
          Length = 713

 Score = 87.4 bits (215), Expect = 4e-18
 Identities = 40/61 (65%), Positives = 46/61 (74%)
 Frame = +2

Query: 55  PSTTSTTTPSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVH 114
           PS+T  T  +    +   DWNTFGQYL+NHRPPLSLSRCSGAHVLEFLRYLDQF + +  
Sbjct: 530 PSSTVPTVAAAMRTKNAGDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFWQRQKF 709

Query: 115 T 115
           T
Sbjct: 710 T 712



 Score = 54.3 bits (129), Expect = 3e-08
 Identities = 41/118 (34%), Positives = 64/118 (53%), Gaps = 4/118 (3%)
 Frame = +1

Query: 1   MNSLQEFESSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTST 60
           M+S+QEF  + NN+++   N M N  N + S T T  +++TT+AS SS+++ +     S 
Sbjct: 370 MDSIQEFIGTCNNENL-TCNFMNNNNNNTISTTTTSLTTTTTTASGSSSSSAASTIINSP 546

Query: 61  TTPSRYENQKRR----DWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVH 114
            + SRYENQKRR     W+   Q   +   PL + RC+   + +    +    KTKVH
Sbjct: 547 NSSSRYENQKRR*LEHLWSV-PQESSSTSFPLQVQRCTCP*ISKVFGSI--LAKTKVH 711


>AL379566 homologue to GP|15912211|gb| At2g31160/T16B12.3 {Arabidopsis
           thaliana}, partial (15%)
          Length = 488

 Score = 73.6 bits (179), Expect = 5e-14
 Identities = 35/39 (89%), Positives = 36/39 (91%)
 Frame = +2

Query: 163 PFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPQPPP 201
           PFGARAVRLYLREVRD Q+KARGISYEKKKRKRPPQ  P
Sbjct: 2   PFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPQQQP 118


>BQ750934 similar to PIR|T19673|T19 hypothetical protein C33B4.3 -
           Caenorhabditis elegans, partial (1%)
          Length = 627

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 20/40 (50%), Positives = 32/40 (80%)
 Frame = +2

Query: 24  NITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTP 63
           N T+P+SS + +I +S+T+S+SSSS++TTS  S++S T P
Sbjct: 500 NTTSPASSPS-SITTSTTSSSSSSSSSTTSSSSSSSPTPP 616



 Score = 32.3 bits (72), Expect = 0.14
 Identities = 17/55 (30%), Positives = 35/55 (62%)
 Frame = +2

Query: 2   NSLQEFESSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPS 56
           +S+ E  S++    ++  N     ++PSS  T T  SSS++S+S++S++++S P+
Sbjct: 446 SSIPESSSTSLPPTLVPQNTTSPASSPSSITTSTTSSSSSSSSSTTSSSSSSSPT 610



 Score = 28.5 bits (62), Expect = 2.0
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
 Frame = +2

Query: 28  PSSSMTMT----IPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           P SS T      +P ++T+ ASS S+ TTS  S++S+++ S
Sbjct: 455 PESSSTSLPPTLVPQNTTSPASSPSSITTSTTSSSSSSSSS 577


>TC88762 similar to GP|22136928|gb|AAM91808.1 unknown protein {Arabidopsis
           thaliana}, partial (3%)
          Length = 805

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 21/46 (45%), Positives = 30/46 (64%), Gaps = 6/46 (13%)
 Frame = +3

Query: 24  NITNPSSSMTMTIPSSSTTS------ASSSSTATTSPPSTTSTTTP 63
           N T+PSSS + + P S+TTS      ASS  + TTSPP++T  ++P
Sbjct: 81  NPTSPSSSPSASSPVSTTTSPPASTPASSPVSTTTSPPASTPASSP 218



 Score = 34.7 bits (78), Expect = 0.028
 Identities = 16/46 (34%), Positives = 29/46 (62%)
 Frame = +3

Query: 19  TNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           ++P+   T+P +S   + P S+TTS  +S+ A++  P+TTS   P+
Sbjct: 114 SSPVSTTTSPPASTPASSPVSTTTSPPASTPASSPVPTTTSPPAPT 251



 Score = 26.6 bits (57), Expect = 7.6
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 8/51 (15%)
 Frame = +3

Query: 23  INITNPSSSMTMTIPS------SSTTSASSSSTATTSPPSTTST--TTPSR 65
           ++  +P++S   ++P+      SSTT+ S S ++T  PP T S+  TTP R
Sbjct: 267 VSTNSPTASPAGSLPAAATPSPSSTTAGSPSPSST--PPGTRSSNETTPGR 413



 Score = 26.2 bits (56), Expect = 9.9
 Identities = 15/43 (34%), Positives = 24/43 (54%)
 Frame = +3

Query: 19  TNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTT 61
           ++P+   T+P +S   + P  +TTS   + T  +SP ST S T
Sbjct: 162 SSPVSTTTSPPASTPASSPVPTTTS-PPAPTPASSPVSTNSPT 287


>TC86742 similar to PIR|T01541|T01541 hypothetical protein A_IG005I10.16 -
           Arabidopsis thaliana, partial (19%)
          Length = 2073

 Score = 37.0 bits (84), Expect = 0.006
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +3

Query: 26  TNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           T P  S T+++ SSS+ S  S S  T+S PSTT+++TP+
Sbjct: 663 TQP*KSSTLSLSSSSSPSPPSPSPPTSSHPSTTTSSTPA 779


>TC91658 similar to GP|14329812|emb|CAC40753. putative nucleosome assembly
           protein 1 {Atropa belladonna}, partial (46%)
          Length = 583

 Score = 36.6 bits (83), Expect = 0.007
 Identities = 18/37 (48%), Positives = 31/37 (83%)
 Frame = -2

Query: 28  PSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           PSSS + +  SSS++S+SSSS++++SP S++S+T+ S
Sbjct: 183 PSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSSSTSIS 73



 Score = 32.7 bits (73), Expect = 0.11
 Identities = 15/37 (40%), Positives = 28/37 (75%)
 Frame = -2

Query: 28  PSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           P   +    PSSS++S+SSSS++++S  S++S+++PS
Sbjct: 210 PLLLLLFPFPSSSSSSSSSSSSSSSSSSSSSSSSSPS 100



 Score = 30.4 bits (67), Expect = 0.53
 Identities = 16/39 (41%), Positives = 29/39 (74%)
 Frame = -2

Query: 26  TNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           ++ SSS + +  SSS++S+SSSS++ +S  S+TS ++ S
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSSSSPSSSSSSTSISSKS 64



 Score = 29.6 bits (65), Expect = 0.90
 Identities = 15/37 (40%), Positives = 28/37 (75%)
 Frame = -2

Query: 29  SSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPSR 65
           SSS + +  SSS++S+SSSS++++   S++ST+  S+
Sbjct: 177 SSSSSSSSSSSSSSSSSSSSSSSSPSSSSSSTSISSK 67



 Score = 29.6 bits (65), Expect = 0.90
 Identities = 16/43 (37%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
 Frame = -2

Query: 21  PMINITNPSSSMTMTIPSSSTTS-ASSSSTATTSPPSTTSTTT 62
           P++ +  P  S + +  SSS++S +SSSS++++S PS++S++T
Sbjct: 210 PLLLLLFPFPSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSSST 82



 Score = 27.7 bits (60), Expect = 3.4
 Identities = 14/42 (33%), Positives = 27/42 (63%)
 Frame = -2

Query: 26  TNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPSRYE 67
           ++ SSS + +  SSS++S SSSS++T+    + S  +P  ++
Sbjct: 159 SSSSSSSSSSSSSSSSSSPSSSSSSTSISSKSLSPASPVNHD 34



 Score = 26.9 bits (58), Expect = 5.8
 Identities = 13/44 (29%), Positives = 30/44 (67%)
 Frame = -2

Query: 21  PMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           P  + ++ SSS + +  SSS++S+SS S++++S   ++ + +P+
Sbjct: 183 PSSSSSSSSSSSSSSSSSSSSSSSSSPSSSSSSTSISSKSLSPA 52


>TC77337 weakly similar to GP|4019275|gb|AAC95573.1| orf 48 {Ateline
           herpesvirus 3}, partial (8%)
          Length = 986

 Score = 35.8 bits (81), Expect = 0.013
 Identities = 17/46 (36%), Positives = 35/46 (75%)
 Frame = -2

Query: 18  NTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTP 63
           +++ + + + PSSS +    SSS++S+SSSS+++ S PS++S+++P
Sbjct: 727 SSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSSSP 590



 Score = 32.0 bits (71), Expect = 0.18
 Identities = 16/43 (37%), Positives = 31/43 (71%)
 Frame = -2

Query: 26  TNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPSRYEN 68
           ++ SSS + ++ SSST S+SSSS  ++S  S++S+++ S + +
Sbjct: 745 SSSSSSSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSS 617



 Score = 30.4 bits (67), Expect = 0.53
 Identities = 17/55 (30%), Positives = 34/55 (60%)
 Frame = -2

Query: 9   SSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTP 63
           SS+++    +T    + + PSSS + +  SSS++S SS S++++S P +++   P
Sbjct: 730 SSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSSSPFSSAPPAP 566



 Score = 29.6 bits (65), Expect = 0.90
 Identities = 16/51 (31%), Positives = 32/51 (62%)
 Frame = -2

Query: 9   SSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTS 59
           SS++     +++P  + ++ SSS + +   SS +S+SSSS  +++PP+  S
Sbjct: 712 SSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSSSPFSSAPPAPPS 560



 Score = 29.6 bits (65), Expect = 0.90
 Identities = 13/35 (37%), Positives = 28/35 (79%)
 Frame = -2

Query: 30  SSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           +S + +  SSS +S+S+ S++++SPPS++S+++ S
Sbjct: 748 ASSSSSSSSSSLSSSSTPSSSSSSPPSSSSSSSSS 644



 Score = 28.5 bits (62), Expect = 2.0
 Identities = 15/39 (38%), Positives = 28/39 (71%)
 Frame = -2

Query: 26  TNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           ++ S S + T  SSS++  SSSS++++S  S++S ++PS
Sbjct: 727 SSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPS 611



 Score = 28.5 bits (62), Expect = 2.0
 Identities = 14/39 (35%), Positives = 24/39 (60%)
 Frame = -2

Query: 38  SSSTTSASSSSTATTSPPSTTSTTTPSRYENQKRRDWNT 76
           SSS++S SSSST ++S  S  S+++ S   +     W++
Sbjct: 733 SSSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSS 617



 Score = 27.7 bits (60), Expect = 3.4
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 28  PSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTT 61
           PSS    + PS +  S SSSS++++S PS+ S +
Sbjct: 508 PSSDDNSSSPSPNAPSPSSSSSSSSSLPSSPSAS 407



 Score = 26.6 bits (57), Expect = 7.6
 Identities = 18/57 (31%), Positives = 32/57 (55%), Gaps = 2/57 (3%)
 Frame = -2

Query: 2   NSLQEFESSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSS--STATTSPPS 56
           +S     SS+      ++ P  + ++ SSS + +  SS ++S+SSS  S+A  +PPS
Sbjct: 730 SSSSSLSSSSTPSSSSSSPPSSSSSSSSSSSSSSSWSSPSSSSSSSPFSSAPPAPPS 560


>TC76523 homologue to PIR|T09648|T09648 nucleolin homolog nuM1 - alfalfa,
            partial (69%)
          Length = 1615

 Score = 35.8 bits (81), Expect = 0.013
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
 Frame = -3

Query: 8    ESSTNNKDMMNTNPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPS-TTSTT 61
            ESST       T+     +  S+S + T P++ +T++S+S+ +TT+ PS +TSTT
Sbjct: 1277 ESSTTTSSSSTTSTATIPSTKSTSTSSTTPTTKSTASSTSTKSTTTTPSTSTSTT 1113



 Score = 33.5 bits (75), Expect = 0.062
 Identities = 16/26 (61%), Positives = 22/26 (84%)
 Frame = -3

Query: 39   SSTTSASSSSTATTSPPSTTSTTTPS 64
            SSTT++SSS+T+T + PST ST+T S
Sbjct: 1274 SSTTTSSSSTTSTATIPSTKSTSTSS 1197



 Score = 32.3 bits (72), Expect = 0.14
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = -3

Query: 26   TNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
            T  SSS T T    ST S S+SST  T+  + +ST+T S
Sbjct: 1265 TTSSSSTTSTATIPSTKSTSTSSTTPTTKSTASSTSTKS 1149


>TC85487 homologue to SP|P49688|RS2_ARATH 40S ribosomal protein S2.
           [Mouse-ear cress] {Arabidopsis thaliana}, partial (88%)
          Length = 1114

 Score = 35.4 bits (80), Expect = 0.016
 Identities = 19/45 (42%), Positives = 26/45 (57%)
 Frame = -2

Query: 20  NPMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPS 64
           NP +     SSS T T  +S TTS +++S  TT+  +T  TTT S
Sbjct: 222 NPFLFFFASSSSSTTTTTTSVTTSTTTTSVTTTTTKTTAKTTTIS 88


>TC93086 similar to PIR|F96695|F96695 hypothetical protein F5A8.8 [imported]
           - Arabidopsis thaliana, partial (30%)
          Length = 752

 Score = 35.0 bits (79), Expect = 0.021
 Identities = 27/77 (35%), Positives = 37/77 (47%), Gaps = 2/77 (2%)
 Frame = -1

Query: 24  NITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPSRYENQKRRDWNTFGQYLRN 83
           N+T PSS   +T PS S T  SSS ++ +   ST + TT SR      R   T    + +
Sbjct: 557 NVTGPSSGSLITSPSRSWTRLSSSRSSCS---STAAATTSSRLRTTSLRSSITIFICILS 387

Query: 84  HRPPLSL--SRCSGAHV 98
           +R   SL    C GA +
Sbjct: 386 NRKTRSLVIISCRGATI 336


>TC81307 weakly similar to GP|4335772|gb|AAD17449.1| unknown protein
           {Arabidopsis thaliana}, partial (31%)
          Length = 1171

 Score = 35.0 bits (79), Expect = 0.021
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +2

Query: 9   SSTNNKDMMNTNPMINITNPSSSMTMTI-PSSSTTSASSSSTATTSPPSTTS 59
           SS N  +     P+ ++ +PSSS  +++ PSSS   +S+SS    +PP +TS
Sbjct: 104 SSLNPNESSTLTPVTSLLSPSSSSFLSLSPSSSLPPSSTSSAPHPTPPPSTS 259



 Score = 26.9 bits (58), Expect = 5.8
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
 Frame = +2

Query: 27  NPSSSMTMTIPSSSTTSASSSSTATTS-----PPSTTST 60
           NP+ S T+T P +S  S SSSS  + S     PPS+TS+
Sbjct: 113 NPNESSTLT-PVTSLLSPSSSSFLSLSPSSSLPPSSTSS 226


>TC78402 weakly similar to PIR|B84853|B84853 hypothetical protein At2g42370
           [imported] - Arabidopsis thaliana, partial (14%)
          Length = 1982

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 22/53 (41%), Positives = 31/53 (57%), Gaps = 6/53 (11%)
 Frame = -3

Query: 18  NTNPMINITNPSSSMTMTIPSSSTTSA------SSSSTATTSPPSTTSTTTPS 64
           +T P+     PS+S   T PSSS++S+      SSS T  +SP  +TSTT+ S
Sbjct: 570 STPPIFTSPLPSTSSFTTTPSSSSSSSFASPSSSSSFTTPSSPSPSTSTTSVS 412



 Score = 26.2 bits (56), Expect = 9.9
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = -3

Query: 38  SSSTTSASSSSTATTSPPSTTSTTTPSR 65
           SSS+TS+SSSS+ + S  S +S+ T S+
Sbjct: 879 SSSSTSSSSSSSCSCSSSSPSSSFTCSQ 796



 Score = 26.2 bits (56), Expect = 9.9
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 24  NITNPSSSMTMTIPSSSTTSASSSSTATTS 53
           +  +PSSS + T PSS + S S++S ++ +
Sbjct: 492 SFASPSSSSSFTTPSSPSPSTSTTSVSSNN 403


>TC87688 similar to GP|10177535|dbj|BAB10930. gene_id:K1F13.21~unknown
           protein {Arabidopsis thaliana}, partial (46%)
          Length = 2077

 Score = 34.7 bits (78), Expect = 0.028
 Identities = 17/45 (37%), Positives = 30/45 (65%)
 Frame = -2

Query: 21  PMINITNPSSSMTMTIPSSSTTSASSSSTATTSPPSTTSTTTPSR 65
           P+    + SSS + ++PSSS++S+SS S++ + PP     +TPS+
Sbjct: 561 PLTFSFSSSSSSSSSLPSSSSSSSSSKSSSPSLPPFAFFFSTPSK 427



 Score = 27.7 bits (60), Expect = 3.4
 Identities = 15/42 (35%), Positives = 28/42 (65%), Gaps = 5/42 (11%)
 Frame = -2

Query: 28  PSSSMTMTIP-----SSSTTSASSSSTATTSPPSTTSTTTPS 64
           P  S  +T P     SSS++S+SSSS++ ++ P+ +S+++ S
Sbjct: 798 PKKSSYLTFPISSASSSSSSSSSSSSSSISNSPAFSSSSSSS 673


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.313    0.128    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,270,461
Number of Sequences: 36976
Number of extensions: 170765
Number of successful extensions: 7847
Number of sequences better than 10.0: 533
Number of HSP's better than 10.0 without gapping: 3589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6461
length of query: 213
length of database: 9,014,727
effective HSP length: 92
effective length of query: 121
effective length of database: 5,612,935
effective search space: 679165135
effective search space used: 679165135
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)