BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141862.23 + phase: 0
(295 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC89598 weakly similar to GP|20127014|gb|AAM10934.1 putative bHL... 453 e-128
TC78996 similar to GP|20127022|gb|AAM10937.1 putative bHLH trans... 166 1e-41
TC78413 similar to PIR|T06329|T06329 symbiotic ammonium transpor... 150 7e-37
TC79250 similar to PIR|T06329|T06329 symbiotic ammonium transpor... 147 5e-36
TC77864 weakly similar to PIR|T06329|T06329 symbiotic ammonium t... 125 2e-29
TC91064 weakly similar to GP|20127014|gb|AAM10934.1 putative bHL... 114 6e-26
TC90345 similar to GP|20127014|gb|AAM10934.1 putative bHLH trans... 99 1e-21
BE239880 weakly similar to PIR|T06329|T063 symbiotic ammonium tr... 97 1e-20
TC92979 similar to GP|20127014|gb|AAM10934.1 putative bHLH trans... 81 6e-16
TC80338 weakly similar to GP|20127018|gb|AAM10936.1 putative bHL... 74 5e-14
TC77213 similar to PIR|T10861|T10861 phaseolin G-box binding pro... 70 1e-12
AW687271 weakly similar to PIR|T06329|T063 symbiotic ammonium tr... 68 4e-12
TC88734 similar to GP|13346180|gb|AAK19612.1 GHDEL61 {Gossypium ... 64 9e-11
BG648958 similar to GP|19310467|gb| At1g01260/F6F3_25 {Arabidops... 64 9e-11
BM780173 similar to PIR|T06329|T063 symbiotic ammonium transport... 62 3e-10
BG586877 similar to GP|16226919|gb AT4g16430/dl4240w {Arabidopsi... 61 5e-10
TC89262 similar to GP|21537346|gb|AAM61687.1 unknown {Arabidopsi... 61 5e-10
TC82195 homologue to GP|19310475|gb|AAL84972.1 AT3g26744/MLJ15_1... 60 1e-09
TC80232 similar to GP|21554896|gb|AAM63723.1 unknown {Arabidopsi... 55 2e-08
TC90648 similar to GP|20127044|gb|AAM10942.1 putative bHLH trans... 52 3e-07
>TC89598 weakly similar to GP|20127014|gb|AAM10934.1 putative bHLH
transcription factor {Arabidopsis thaliana}, partial
(24%)
Length = 849
Score = 453 bits (1166), Expect = e-128
Identities = 227/243 (93%), Positives = 238/243 (97%)
Frame = +3
Query: 1 MEDTTLFSDHEYQMDSYAFQFDDMAYFKSFSESPQESTYSSHTNINNKRIHSESTQNSSF 60
MEDTTLFSDHEYQMDSYAFQFDDMAYFKSFSESPQESTYSSHTNINNKRIHSESTQNSSF
Sbjct: 120 MEDTTLFSDHEYQMDSYAFQFDDMAYFKSFSESPQESTYSSHTNINNKRIHSESTQNSSF 299
Query: 61 PTQSPDQSVASATPPTKLLKASPKIISFDYSNNDSKVKKPKTEIGYGENLNFGSVISQGD 120
PTQSPDQSVASATPPTKLLKASPKIISFDYSNNDSKVKKPKTEIGYGENLNFGSVISQGD
Sbjct: 300 PTQSPDQSVASATPPTKLLKASPKIISFDYSNNDSKVKKPKTEIGYGENLNFGSVISQGD 479
Query: 121 YYKRENKVSAVNRNPIQAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIK 180
YYKRENKVSAVNRNP+QA+DHV+AER+RREKLSQRFI+LSS+LPGLKKMDKATILEDAIK
Sbjct: 480 YYKRENKVSAVNRNPMQARDHVIAERKRREKLSQRFIALSSILPGLKKMDKATILEDAIK 659
Query: 181 HLKQLNERVKTLEEHVADKKVESAVFMKRSILFEEDDRSSCDENSDQSLSKIEARVSGKD 240
H+KQL ERVKTLEE VADKKVESAVF+KRSILF+ +D SSCDENSDQSL KIE+RVSGKD
Sbjct: 660 HMKQLQERVKTLEEQVADKKVESAVFVKRSILFDNNDSSSCDENSDQSLPKIESRVSGKD 839
Query: 241 MLI 243
MLI
Sbjct: 840 MLI 848
>TC78996 similar to GP|20127022|gb|AAM10937.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (27%)
Length = 1081
Score = 166 bits (419), Expect = 1e-41
Identities = 89/159 (55%), Positives = 121/159 (75%), Gaps = 1/159 (0%)
Frame = +3
Query: 133 RNPIQAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTL 192
RN QA++HVMAER+RREKL++ FI+LS+++PGLKKMDKA++L DA K++KQL R++TL
Sbjct: 45 RNTAQAREHVMAERKRREKLTRSFIALSAIVPGLKKMDKASVLGDATKYMKQLQARLQTL 224
Query: 193 EEHVAD-KKVESAVFMKRSILFEEDDRSSCDENSDQSLSKIEARVSGKDMLIRIHGDKHC 251
EE D KK S V +KRSI+F ++ + N +Q L +IE RVS KD+LI+I DKH
Sbjct: 225 EEQAEDNKKAGSTVQVKRSIIFTNNNDDDSNSN-NQPLPEIEVRVSSKDVLIKIQCDKHS 401
Query: 252 GRTATAILNELEKHHLSVQSSSILPFGNNYLDITIVAQV 290
GR AT +L +LE +L+V SS+ LPFGNN +D+TIVAQ+
Sbjct: 402 GRAAT-VLGQLENLNLTVHSSTFLPFGNNIVDVTIVAQM 515
>TC78413 similar to PIR|T06329|T06329 symbiotic ammonium transport protein
SAT1 - soybean, partial (30%)
Length = 1397
Score = 150 bits (378), Expect = 7e-37
Identities = 99/271 (36%), Positives = 155/271 (56%), Gaps = 8/271 (2%)
Frame = +2
Query: 28 KSFSESPQESTYSSHTNINNKRIHSESTQNSSFPTQS----PDQSVASATPPTKLLKASP 83
K F + S + N ++ + S + +SS+P + P++ + T +
Sbjct: 188 KEFLSNDIASIFQQEENFQHQPLLSSESYSSSYPLEKNFERPNKKLKKNTSSPS--STTS 361
Query: 84 KIISFDYSNNDSKVKK-PKTEIGYGENLNFGSVISQGDYYKRENKVSAVNRNPIQAQDHV 142
+I+SFD + N K K P ++ +N GS+ Q + + R+ QDH+
Sbjct: 362 QILSFDCTLNTKKNKVVPLSQTELPQNRK-GSLQKQNIVETIKPQGQGTKRSVAHNQDHI 538
Query: 143 MAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTLEEHVADKKVE 202
+AER+RREKLSQ I+L++L+PGLKKMDKA++L DAIK++K+L ER++ LEE + V+
Sbjct: 539 IAERKRREKLSQCLIALAALIPGLKKMDKASVLGDAIKYVKELQERLRVLEEQNKNSHVQ 718
Query: 203 SAVFMKRSILFEEDDRSSCDE---NSDQSLSKIEARVSGKDMLIRIHGDKHCGRTATAIL 259
S V + L + S E ++++L +EA+V KD+LIRIH K G IL
Sbjct: 719 SVVTVDEQQLSYDSSNSDDSEVASGNNETLPHVEAKVLDKDVLIRIHCQKQKG-LLLKIL 895
Query: 260 NELEKHHLSVQSSSILPFGNNYLDITIVAQV 290
E++K HL V ++S+LPFG++ LDITIVAQ+
Sbjct: 896 VEIQKLHLFVVNNSVLPFGDSILDITIVAQM 988
>TC79250 similar to PIR|T06329|T06329 symbiotic ammonium transport protein
SAT1 - soybean, partial (34%)
Length = 1145
Score = 147 bits (371), Expect = 5e-36
Identities = 111/289 (38%), Positives = 159/289 (54%), Gaps = 27/289 (9%)
Frame = +2
Query: 29 SFSESPQESTYSSHTNINNKRIHSESTQNSSFPTQSPDQSVASATPPTKLLKASPKIISF 88
+ +S ++ SHT N + NSS + S K + I+ F
Sbjct: 173 NLQQSFSGGSHCSHTTSN-------TMSNSSGDVNKTNPSNIGYPSLPKKDSSHSYILCF 331
Query: 89 DYSNNDSKVK-----KPKTEIG-YGENL-NFGSVISQGDYYKRE----NKVSAVNRNPIQ 137
N +S + KPK ++ +G++L + GS+ +Q KR K + RN
Sbjct: 332 GNENPESMLNIGSTLKPKGKVSNHGKSLASKGSLENQKKGPKRNIQESKKTDSAARN--- 502
Query: 138 AQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTLEEHVA 197
AQDH++AER+RREK+SQ+FI+LS+LLP LKKMDKA++L DAI H+KQL E+VK LEE
Sbjct: 503 AQDHIIAERKRREKISQKFIALSALLPDLKKMDKASVLGDAINHVKQLQEKVKLLEEKNQ 682
Query: 198 DKKVESA--VFMKRSILFEED-DRSSCDENS-------------DQSLSKIEARVSGKDM 241
VES V+++++ + D D S NS +SL ++EARVS K++
Sbjct: 683 KNNVESVSMVYVEKTKSYSSDEDVSETSSNSGYGNCCHTHTSKPSRSLPEVEARVSEKNV 862
Query: 242 LIRIHGDKHCGRTATAILNELEKHHLSVQSSSILPFGNNYLDITIVAQV 290
LIR+H +KH G I+ E+E HLSV SSS L FG LDITI+A++
Sbjct: 863 LIRVHCEKHKGALMN-IIQEIENLHLSVTSSSALLFGTTKLDITIIAEM 1006
>TC77864 weakly similar to PIR|T06329|T06329 symbiotic ammonium transport
protein SAT1 - soybean, partial (21%)
Length = 1411
Score = 125 bits (314), Expect = 2e-29
Identities = 91/288 (31%), Positives = 144/288 (49%), Gaps = 18/288 (6%)
Frame = +3
Query: 21 FDDMAYFKSFS-ESPQESTYSSHTNINNKRIHSESTQNSSFPTQSPDQSVASATPPTKLL 79
FD+ + K E P+ SS+ N + +S + N SP S+ S +
Sbjct: 147 FDEQEFLKDIILEEPECIELSSYLCSNKTKDNSTTIINVEGDATSPTNSILSFDETSLFC 326
Query: 80 KASPKIISFDYSNNDSKVKK--------PKTEIGYGENLNFGSVISQGDYYKR------- 124
+ + SNN + +K P T + N + +I + +
Sbjct: 327 GDYENVETNHKSNNSNSIKSLERSCVSSPATYLLSFGNSSIEPIIEPMSHKTKRRTDESR 506
Query: 125 --ENKVSAVNRNPIQAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHL 182
+ V R+ QDH+MAER+RR +L++ I+LS+++PGLKKMDK +L +A+ +
Sbjct: 507 GVKEATKKVRRSCETVQDHLMAERKRRRELTENIIALSAMIPGLKKMDKCYVLSEAVNYT 686
Query: 183 KQLNERVKTLEEHVADKKVESAVFMKRSILFEEDDRSSCDENSDQSLSKIEARVSGKDML 242
KQL +R+K LE D K A+F +S + SS + S +SL ++EARV K++L
Sbjct: 687 KQLQKRIKELENQNKDSKPNPAIFKWKSQV------SSNKKKSSESLLEVEARVKEKEVL 848
Query: 243 IRIHGDKHCGRTATAILNELEKHHLSVQSSSILPFGNNYLDITIVAQV 290
IRIH +K I LEK ++++ SSS+LPFG++ L I I AQ+
Sbjct: 849 IRIHCEKQ-KDIVLKIHELLEKFNITITSSSMLPFGDSILVINICAQM 989
>TC91064 weakly similar to GP|20127014|gb|AAM10934.1 putative bHLH
transcription factor {Arabidopsis thaliana}, partial
(19%)
Length = 751
Score = 114 bits (284), Expect = 6e-26
Identities = 66/167 (39%), Positives = 106/167 (62%), Gaps = 9/167 (5%)
Frame = +2
Query: 133 RNPIQAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTL 192
RN DH+M+ER RR+ L+ + I LS+L+PGLKK+DK ++ +AI ++KQL ER+K L
Sbjct: 158 RNTSDTLDHIMSERNRRQLLTSKIIELSALIPGLKKIDKVHVVTEAINYMKQLEERLKEL 337
Query: 193 EEHVADKKVESAVFMKRSILFEEDDRSSCDENSD------QSLSKIEARVSGKDMLIRIH 246
EE + K S + RS + + D + + N++ +SL ++EAR+ K++LI+I
Sbjct: 338 EEDIKKKDAGSLSTITRSRVLIDKDIAIGEMNTEECYGRNESLLEVEARILEKEVLIKI- 514
Query: 247 GDKHCGRTATAILN---ELEKHHLSVQSSSILPFGNNYLDITIVAQV 290
+CG ++N +L+ HLS+ S ++LPFGN LDITI+A++
Sbjct: 515 ---YCGMQEGIVVNIMSQLQLLHLSITSINVLPFGNT-LDITIIAKM 643
>TC90345 similar to GP|20127014|gb|AAM10934.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (21%)
Length = 906
Score = 99.4 bits (246), Expect = 1e-21
Identities = 79/233 (33%), Positives = 125/233 (52%), Gaps = 19/233 (8%)
Frame = +1
Query: 27 FKSFSESPQESTYSSHTNINNKRIHS-ESTQNSSFPTQSPDQSVASATPPTKLL--KASP 83
F F + P + ++ + ++IN + + S ES + +S+ T+ L K +
Sbjct: 223 FLIFFQEPNDYSFINQSSINAEIVGSLESNLERPSKLLKTTTTCSSSYMKTEHLSQKTAS 402
Query: 84 KIISFDYSNNDSK----VKKPKTEIGYGENLNFGSVISQGDYYKRENKVSAVNRNPIQAQ 139
+ SF+ N + KPKT++ +N G + + ++N + +
Sbjct: 403 YVFSFENENPPPRKVEPALKPKTKVVNSKN---GPRRVKNNESNKKNGSFSKSTTTHHTP 573
Query: 140 DHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTLEEHVADK 199
DH++AER RREK+SQ FI+LS+L+P LKKMDKA++L DAIK++K+L VK LEE K
Sbjct: 574 DHIIAERIRREKISQLFIALSALIPNLKKMDKASVLGDAIKYVKELKGAVKMLEE--PSK 747
Query: 200 KVESAVFMKR-SILFEEDDRS-----SCDENSDQ------SLSKIEARVSGKD 240
VE V +K+ S L +D S SC+ NSD+ SL ++EA +SGK+
Sbjct: 748 SVEPVVVVKKLSELSSHEDGSDTSSNSCNGNSDETSKTNLSLPEVEASLSGKN 906
>BE239880 weakly similar to PIR|T06329|T063 symbiotic ammonium transport
protein SAT1 - soybean, partial (10%)
Length = 659
Score = 96.7 bits (239), Expect = 1e-20
Identities = 56/131 (42%), Positives = 88/131 (66%), Gaps = 8/131 (6%)
Frame = +2
Query: 168 KMDKATILEDAIKHLKQLNERVKTLEEHVADKKVESAVFMKRSILF-----EEDDRSSCD 222
KMDKA++L ++I ++K+L ER++ LEE KVES V +K+ ++DD SSCD
Sbjct: 2 KMDKASVLAESIIYVKELKERLEVLEEQNKKTKVESVVVLKKPDHSIDDDDDDDDNSSCD 181
Query: 223 EN---SDQSLSKIEARVSGKDMLIRIHGDKHCGRTATAILNELEKHHLSVQSSSILPFGN 279
E+ + S +++ARVSGK+MLIRIH +KH G ++ E++ L +SS+LPFG+
Sbjct: 182 ESIEGATDSSVQVQARVSGKEMLIRIHCEKHKG-ILVKVMAEIQSFQLFAVNSSVLPFGD 358
Query: 280 NYLDITIVAQV 290
+ +DITI+A++
Sbjct: 359 S-IDITIIAEM 388
>TC92979 similar to GP|20127014|gb|AAM10934.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (15%)
Length = 744
Score = 80.9 bits (198), Expect = 6e-16
Identities = 58/177 (32%), Positives = 91/177 (50%), Gaps = 2/177 (1%)
Frame = +2
Query: 42 HTNINNKRIHSESTQNSSFPTQSPDQSVASATPPTKLLKASPKIISFDYSNNDSKVKKPK 101
H I+N ++ES + SF Q P + PT + N +
Sbjct: 263 HETIDNSDKNNESL-SPSFQFQVPSFDNPPNSSPT------------NSKENIETIPLSP 403
Query: 102 TEIGYGENLNFGSVISQG--DYYKRENKVSAVNRNPIQAQDHVMAERRRREKLSQRFISL 159
T++ EN+N + S+G + K E K S R +DH+MAER RREKL+Q FI+L
Sbjct: 404 TDL---ENMNHSTETSKGSLENKKLETKTSKSKRPRAHGRDHIMAERNRREKLTQSFIAL 574
Query: 160 SSLLPGLKKMDKATILEDAIKHLKQLNERVKTLEEHVADKKVESAVFMKRSILFEED 216
++L+P LKKMDK ++L D IK++K+L R++ + E ++K + K + +ED
Sbjct: 575 AALVPNLKKMDKLSVLIDTIKYMKELKNRLEDVGE--PNQKTKKKSSTKPCLCSDED 739
>TC80338 weakly similar to GP|20127018|gb|AAM10936.1 putative bHLH
transcription factor {Arabidopsis thaliana}, partial
(15%)
Length = 1128
Score = 74.3 bits (181), Expect = 5e-14
Identities = 62/185 (33%), Positives = 98/185 (52%), Gaps = 1/185 (0%)
Frame = +1
Query: 107 GENLNFGSVISQGDY-YKRENKVSAVNRNPIQAQDHVMAERRRREKLSQRFISLSSLLPG 165
GEN + S + D ++ + +V + I E +E L + LS ++ G
Sbjct: 205 GENWPYNSDLEISDEAILKDGESESVCEDQIGDPTDNTKENNEKEMLKE----LSDVM-G 369
Query: 166 LKKMDKATILEDAIKHLKQLNERVKTLEEHVADKKVESAVFMKRSILFEEDDRSSCDENS 225
LKKMD+ +I+E+A ++ L ERV+ LE+ + KR+ + D SC S
Sbjct: 370 LKKMDEISIIENARDYVATLQERVRELEQEDGSNICTN----KRTKV--NSDEYSCG-TS 528
Query: 226 DQSLSKIEARVSGKDMLIRIHGDKHCGRTATAILNELEKHHLSVQSSSILPFGNNYLDIT 285
D +L +++A+V D+L+ +H +K G IL LE HLSV +SS+L FG + LDIT
Sbjct: 529 DNTLPEVKAKVLQNDVLVIVHCEKQNG-ILLKILTCLENLHLSVVNSSVLNFGKSILDIT 705
Query: 286 IVAQV 290
IVA++
Sbjct: 706 IVAKM 720
>TC77213 similar to PIR|T10861|T10861 phaseolin G-box binding protein PG1 -
kidney bean, partial (70%)
Length = 2391
Score = 69.7 bits (169), Expect = 1e-12
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 18/213 (8%)
Frame = +3
Query: 75 PTKLLKASPKIISFDYSNNDSKVKKPKTEIGYGENLNFGSVISQGDYYKRENKVSAVNRN 134
P+ +K+S + D ++D V K GE+ V+ G K+ + A R
Sbjct: 1377 PSSNMKSSSRGGGGDSDHSDLDVSAVKE----GES---SRVVEPGKRPKKRGRKPANGRE 1535
Query: 135 PIQAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTLEE 194
+ +HV AER+RREKL+Q+F +L +++P + KMDKA++L DAI ++ +L +++ LE
Sbjct: 1536 --EPLNHVEAERQRREKLNQKFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQGLES 1709
Query: 195 HVADKKVESAVFMKRSILFEEDDRSS----CDENSDQSLSK----------IEARVSGKD 240
+ + + K L ++S D+ +++ S I+ ++ G D
Sbjct: 1710 SKGELEKQLGATKKELELVASKNQSQNPIPLDKEKEKTTSSTSSSKLIDLDIDVKIMGWD 1889
Query: 241 MLIRIHGDK--HCGRTATAILNE--LEKHHLSV 269
+IRI K H A L E L+ +H SV
Sbjct: 1890 AMIRIQCSKKNHPAAKLMAALKELDLDVNHASV 1988
>AW687271 weakly similar to PIR|T06329|T063 symbiotic ammonium transport
protein SAT1 - soybean, partial (10%)
Length = 469
Score = 68.2 bits (165), Expect = 4e-12
Identities = 33/34 (97%), Positives = 34/34 (99%)
Frame = +1
Query: 257 AILNELEKHHLSVQSSSILPFGNNYLDITIVAQV 290
AILNELEKHHLSVQSSSILPFGNNYLDITIVAQ+
Sbjct: 1 AILNELEKHHLSVQSSSILPFGNNYLDITIVAQM 102
>TC88734 similar to GP|13346180|gb|AAK19612.1 GHDEL61 {Gossypium hirsutum},
partial (40%)
Length = 1701
Score = 63.5 bits (153), Expect = 9e-11
Identities = 28/67 (41%), Positives = 49/67 (72%)
Frame = +3
Query: 137 QAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTLEEHV 196
+ +HV++ERRRR KL++RF++L S++P K DK +IL+DAI++L++L ++++ LE
Sbjct: 1395 EGMNHVLSERRRRAKLNERFLTLRSMVPSNSKDDKVSILDDAIEYLRKLEKKIRELEAQR 1574
Query: 197 ADKKVES 203
+ES
Sbjct: 1575 EPTGIES 1595
>BG648958 similar to GP|19310467|gb| At1g01260/F6F3_25 {Arabidopsis
thaliana}, partial (15%)
Length = 806
Score = 63.5 bits (153), Expect = 9e-11
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Frame = +3
Query: 86 ISFDYSNNDSKVKKPKTEIGYGENLNFGSVISQGDYYKRENKVSAVNRNPIQAQD----H 141
+ D+S +S+ + I E + + D E + R P +D H
Sbjct: 168 MQIDFSGANSRANSVRPVIAESELV----ADVEADQPSDERRPRKRGRKPANGRDEPLNH 335
Query: 142 VMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTLE 193
V AER+RREKL+QRF +L +++P + KMDKA++L DAI ++ +L ++K +E
Sbjct: 336 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKIME 491
>BM780173 similar to PIR|T06329|T063 symbiotic ammonium transport protein
SAT1 - soybean, partial (14%)
Length = 732
Score = 61.6 bits (148), Expect = 3e-10
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = -3
Query: 137 QAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQL 185
Q DH+MAER+RR +LSQ+FI+LS+ +PGLKKMDK IL +AI ++K L
Sbjct: 679 QYLDHIMAERKRRLELSQKFIALSATIPGLKKMDKNYILGEAISYVKLL 533
>BG586877 similar to GP|16226919|gb AT4g16430/dl4240w {Arabidopsis thaliana},
partial (35%)
Length = 755
Score = 61.2 bits (147), Expect = 5e-10
Identities = 31/70 (44%), Positives = 47/70 (66%)
Frame = +1
Query: 123 KRENKVSAVNRNPIQAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHL 182
KR K + P+ +HV AER+RREKL+QRF +L + +P + KMDKA++L DAI H+
Sbjct: 553 KRGRKPANGREEPL---NHVEAERQRREKLNQRFYALRAGVPNISKMDKASLLGDAITHI 723
Query: 183 KQLNERVKTL 192
L +++K +
Sbjct: 724 TDLQKKIKLM 753
>TC89262 similar to GP|21537346|gb|AAM61687.1 unknown {Arabidopsis
thaliana}, partial (40%)
Length = 1198
Score = 61.2 bits (147), Expect = 5e-10
Identities = 38/132 (28%), Positives = 73/132 (54%), Gaps = 3/132 (2%)
Frame = +3
Query: 115 VISQGDYYKRENKVSAVNRNPIQAQDHVMAERRRREKLSQRFISLSSLLPGLKKMDKATI 174
V + G+ +R+N+ + P + ++MAERRRR++L+ R L +++P + KMD+ I
Sbjct: 489 VFNTGNGMERKNRSKKLQGQPSK---NLMAERRRRKRLNDRLSMLRAIVPKISKMDRTAI 659
Query: 175 LEDAIKHLKQLNERVKTLEEHV-ADKKVESAV--FMKRSILFEEDDRSSCDENSDQSLSK 231
L D I ++K+L E++K L++ + D + S V IL + + ++D ++
Sbjct: 660 LGDTIDYMKELLEKIKNLQQEIELDSNMTSIVKDVKPNEILIRNSPKFEVERSAD---TR 830
Query: 232 IEARVSGKDMLI 243
+E +GK L+
Sbjct: 831 VEICCAGKPGLL 866
>TC82195 homologue to GP|19310475|gb|AAL84972.1 AT3g26744/MLJ15_15
{Arabidopsis thaliana}, partial (17%)
Length = 1189
Score = 60.1 bits (144), Expect = 1e-09
Identities = 35/102 (34%), Positives = 58/102 (56%)
Frame = +2
Query: 95 SKVKKPKTEIGYGENLNFGSVISQGDYYKRENKVSAVNRNPIQAQDHVMAERRRREKLSQ 154
S++ E G N + G+V++ GD ++ K ++MAERRRR+KL+
Sbjct: 842 SELNYDSDENGNDLNNSNGTVVTGGDQKGKKKKGLPAK--------NLMAERRRRKKLND 997
Query: 155 RFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTLEEHV 196
R L S++P + KMD+A+IL DA+ +LK+L +R+ L +
Sbjct: 998 RLYMLRSVVPKISKMDRASILGDAVDYLKELLQRINNLHNEL 1123
>TC80232 similar to GP|21554896|gb|AAM63723.1 unknown {Arabidopsis
thaliana}, partial (62%)
Length = 952
Score = 55.5 bits (132), Expect = 2e-08
Identities = 21/58 (36%), Positives = 46/58 (79%)
Frame = +1
Query: 141 HVMAERRRREKLSQRFISLSSLLPGLKKMDKATILEDAIKHLKQLNERVKTLEEHVAD 198
++++ER RR+KL++R +L +++P + KMDKA+I++DAI++++ L+E+ K ++ + +
Sbjct: 226 NIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQLLHEQEKVIQAEIME 399
>TC90648 similar to GP|20127044|gb|AAM10942.1 putative bHLH transcription
factor {Arabidopsis thaliana}, partial (21%)
Length = 1164
Score = 52.0 bits (123), Expect = 3e-07
Identities = 37/120 (30%), Positives = 59/120 (48%), Gaps = 1/120 (0%)
Frame = +3
Query: 79 LKASPKIISFDYSNNDSKVKKPKTEIGYGENLNFGSVISQGDYYKRENKVSAVNRNPIQA 138
+K SP+ IS ND K K ++ +N G + R + A N
Sbjct: 15 VKDSPRKISDGSKENDKKPKVEQSGKQAKDNSPSGDASKDNFIHVRARRGQATN------ 176
Query: 139 QDHVMAERRRREKLSQRFISLSSLLPGLKKM-DKATILEDAIKHLKQLNERVKTLEEHVA 197
H +AER RREK+S+R L L+PG K+ KA +L++ I +++ L ++V+ L +A
Sbjct: 177 -SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 353
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.312 0.128 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,748,031
Number of Sequences: 36976
Number of extensions: 93242
Number of successful extensions: 610
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of query: 295
length of database: 9,014,727
effective HSP length: 95
effective length of query: 200
effective length of database: 5,502,007
effective search space: 1100401400
effective search space used: 1100401400
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC141862.23