BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141436.6 - phase: 0
(1173 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TC78881 similar to PIR|D86236|D86236 protein F14N23.5 [imported]... 874 0.0
CB894543 similar to PIR|D86236|D86 protein F14N23.5 [imported] -... 201 1e-51
TC92743 similar to GP|9759091|dbj|BAB09660.1 contains similarity... 86 3e-20
CB065349 similar to SP|P10713|CONX_N Conidiation-specific protei... 42 0.001
AW684389 similar to GP|9759091|dbj contains similarity to unknow... 41 0.002
CA860193 similar to GP|21039795|gb| hypothetical protein {Dictyo... 40 0.007
TC88616 weakly similar to PIR|T48209|T48209 hypothetical protein... 38 0.026
TC77205 similar to GP|19347753|gb|AAL86301.1 putative RING-H2 zi... 37 0.045
TC87819 similar to GP|16209696|gb|AAL14405.1 AT5g20880/F22D1_50 ... 37 0.045
TC80581 similar to GP|19683021|gb|AAL92644.1 hypothetical protei... 37 0.045
TC82882 similar to GP|20258832|gb|AAM13898.1 unknown protein {Ar... 37 0.058
BG457583 similar to GP|13561982|gb flagelliform silk protein {Ar... 36 0.099
BQ144197 homologue to GP|1841930|emb| ROX protein {Mus musculus}... 35 0.22
TC79191 similar to GP|2306979|gb|AAB65792.1| metallothionein-II ... 35 0.22
BQ137255 homologue to PIR|B34768|B347 ORF5 protein - Orf virus (... 35 0.22
TC93358 weakly similar to GP|7303636|gb|AAF58688.1| CG13214-PA {... 35 0.22
TC92977 similar to GP|15528625|dbj|BAB64646. putative splicing f... 35 0.22
TC79918 similar to PIR|T06671|T06671 hypothetical protein T17F15... 35 0.22
BG644345 weakly similar to GP|19697333|gb putative protein poten... 34 0.29
BF641220 weakly similar to PIR|G86203|G86 probable N-arginine di... 33 0.64
>TC78881 similar to PIR|D86236|D86236 protein F14N23.5 [imported] -
Arabidopsis thaliana, partial (31%)
Length = 1710
Score = 874 bits (2257), Expect(3) = 0.0
Identities = 384/555 (69%), Positives = 445/555 (79%), Gaps = 4/555 (0%)
Frame = +3
Query: 336 PPRLCPCGKKRIATRCSDRQSDLTCGQRCDKLLDCGRHHCENACHVGPCDPCQVLIEASC 395
PPRLCPCGK I TRCSD QS +TCGQ+C KLL CGRH C CH+GPCD C+V I+ASC
Sbjct: 3 PPRLCPCGKITITTRCSDDQSLITCGQQCQKLLQCGRHRCHQICHLGPCDLCRVPIDASC 182
Query: 396 FCSKMTQVLFCGEMAMKGEFEAEGGVFSCGSNCGNVLGCSNHICREVCHPGSCGECEFLP 455
FC K +V+ CG+MA+KGE++AE GV+SCGS CGN L C NH+C E CHPGSC EC LP
Sbjct: 183 FCKKSLEVILCGDMAVKGEYKAEAGVYSCGSTCGNKLACGNHMCIETCHPGSCVECPLLP 362
Query: 456 SRVKACCCGKTKLEDERKSCVDPIPTCSKVCSKTLRCGVHACKETCHVGECPPCKVLISQ 515
+ VK C CGKT+L +ER SC+DPIPTCS+VC KTL CG+H C TCH G+C PC VL+SQ
Sbjct: 363 TNVKTCFCGKTRLGEERLSCLDPIPTCSQVCGKTLPCGMHHCTLTCHDGDCSPCSVLVSQ 542
Query: 516 KCRCGSTSRTVECYKTT-ENQKFTCQKPCGAKKNCGRHRCSEKCCPLSGPNNGLTTPDWD 574
KCRCGSTS+TVEC K T N+KFTC+KPCG K+NCGRHRCSE+CCPLS PNN L D D
Sbjct: 543 KCRCGSTSKTVECCKKTMANEKFTCEKPCGKKRNCGRHRCSERCCPLSNPNNILNATDSD 722
Query: 575 PHFCSMLCGKKLRCGQHVCETLCHSGHCPPCLETIFTDLACACGMTSIPPPLPCGTMPPL 634
PH CS+ CGKKLRCG+H C++ CHSGHCPPCLETIFTDL CACG TSIPPPLPCGT P
Sbjct: 723 PHLCSIPCGKKLRCGKHACDSNCHSGHCPPCLETIFTDLTCACGKTSIPPPLPCGTPSPS 902
Query: 635 CQLPCSVPQPCGHSGSHSCHFGDCPPCSVPVSKECVGGHVILRNIPCGSNNIKCNNPCGR 694
CQLPCSVPQPCGH SHSCH GDCPPC PV++ECVGGHV+LRNIPC S +I+CN CG+
Sbjct: 903 CQLPCSVPQPCGHPASHSCHHGDCPPCVAPVARECVGGHVVLRNIPCSSRDIRCNKLCGK 1082
Query: 695 TRQCGLHACGRSCHSPPCDILPGIVKGLRAACGQTCGAPRSGCRHMCMALCHPGCPCPDA 754
T+QCGLHAC R CHS PCD +V+G+R +CGQ+CGAPR CRH C A CHP PCPD
Sbjct: 1083TKQCGLHACSRICHSSPCD-NQHVVQGIRTSCGQSCGAPRRDCRHTCTAPCHPSSPCPDR 1259
Query: 755 RCEFPVTITCSCGRISANVPCDVGGNNSNYNADAIFEASIIQKLPMPLQPVDANGQKVPL 814
RC F V ITC+CGR++ NVPCD GG+ + D++ EASIIQKL +PLQP+D NG+KVPL
Sbjct: 1260RCGFAVAITCTCGRLTTNVPCDAGGS----DVDSMHEASIIQKLLVPLQPLDPNGKKVPL 1427
Query: 815 GQRKLMCDEECAKLERKRVLADAFDI-TPSLDALHFGENS--SYELLSDTFRRDPKWVLA 871
GQRKLMC++ECAKLERKRVLA+AF+I TP+LD+ FGENS ELL+D RRD KWVL+
Sbjct: 1428GQRKLMCNDECAKLERKRVLANAFEISTPNLDSFQFGENSVAHSELLAD*LRRDSKWVLS 1607
Query: 872 IEERCKILVLGKSKG 886
+EERCK LVLGK KG
Sbjct: 1608VEERCKYLVLGKGKG 1652
Score = 180 bits (457), Expect = 3e-45
Identities = 130/448 (29%), Positives = 163/448 (36%), Gaps = 43/448 (9%)
Frame = +3
Query: 290 HSCGEPCGKPLEKEVFVTEERKDELCP-HACVLQCHPGPCPPCKAF-APPRLCPCGKKRI 347
+SCG CG L C H C+ CHPG C C + C CGK R+
Sbjct: 261 YSCGSTCGNKLA-------------CGNHMCIETCHPGSCVECPLLPTNVKTCFCGKTRL 401
Query: 348 A-TRCSDRQSDLTCGQRCDKLLDCGRHHCENACHVGPCDPCQVLIEASCFCSKMTQVLFC 406
R S TC Q C K L CG HHC CH G C PC VL+ C C ++ + C
Sbjct: 402 GEERLSCLDPIPTCSQVCGKTLPCGMHHCTLTCHDGDCSPCSVLVSQKCRCGSTSKTVEC 581
Query: 407 GEMAMKGE-FEAE---GGVFSCGSN-----------------------------CGNVLG 433
+ M E F E G +CG + CG L
Sbjct: 582 CKKTMANEKFTCEKPCGKKRNCGRHRCSERCCPLSNPNNILNATDSDPHLCSIPCGKKLR 761
Query: 434 CSNHICREVCHPGSCGECEFLPSRVKACCCGKTKLEDERKSCVDPIPTCSKVCSKTLRCG 493
C H C CH G C C C CGKT + C P P+C CS CG
Sbjct: 762 CGKHACDSNCHSGHCPPCLETIFTDLTCACGKTSIPPP-LPCGTPSPSCQLPCSVPQPCG 938
Query: 494 VHACKETCHVGECPPCKVLISQKCRCGS-TSRTVECYKTTENQKFTCQKPCGAKKNCGRH 552
H +CH G+CPPC ++++C G R + C ++ C K CG K CG H
Sbjct: 939 -HPASHSCHHGDCPPCVAPVARECVGGHVVLRNIPC----SSRDIRCNKLCGKTKQCGLH 1103
Query: 553 RCSEKC----CPLSGPNNGLTTPDWDPHFCSMLCGKKLRCGQHVCETLCH-SGHCPPCLE 607
CS C C G+ T C CG R +H C CH S CP
Sbjct: 1104ACSRICHSSPCDNQHVVQGIRTS------CGQSCGAPRRDCRHTCTAPCHPSSPCPDRRC 1265
Query: 608 TIFTDLACACGMTSIPPPLPCGTMPPLCQLPCSVPQPCGHSGSHSCHFGD-CPPCSVPVS 666
+ C CG +L +VP G S S H VP+
Sbjct: 1266GFAVAITCTCG-----------------RLTTNVPCDAGGSDVDSMHEASIIQKLLVPLQ 1394
Query: 667 KECVGGHVILRNIPCGSNNIKCNNPCGR 694
G + +P G + CN+ C +
Sbjct: 1395PLDPNG----KKVPLGQRKLMCNDECAK 1466
Score = 87.4 bits (215), Expect = 3e-17
Identities = 64/246 (26%), Positives = 77/246 (31%), Gaps = 6/246 (2%)
Frame = +3
Query: 289 PHSCGEPCGKPLEKEVFVTEERKDELC-PHACVLQCHPGPCPPC-KAFAPPRLCPCGKKR 346
PH C PCGK L C HAC CH G CPPC + C CGK
Sbjct: 723 PHLCSIPCGKKLR-------------CGKHACDSNCHSGHCPPCLETIFTDLTCACGKTS 863
Query: 347 IATRCSDRQSDLTCGQRCDKLLDCGRHHCENACHVGPCDPCQVLIEASCFCSKMTQVLFC 406
I +C C CG H ++CH G C PC + C
Sbjct: 864 IPPPLPCGTPSPSCQLPCSVPQPCG-HPASHSCHHGDCPPCVAPVAREC----------V 1010
Query: 407 GEMAMKGEFEAEGGVFSCGSNCGNVLGCSNHICREVCHPGSCGECEFLPSRVKACCCGKT 466
G + C CG C H C +CH C
Sbjct: 1011GGHVVLRNIPCSSRDIRCNKLCGKTKQCGLHACSRICHSSPC------------------ 1136
Query: 467 KLEDERKSCVDPIPT-CSKVCSKTLRCGVHACKETCHVGE-CPP--CKVLISQKCRCGST 522
+ + V I T C + C R H C CH CP C ++ C CG
Sbjct: 1137----DNQHVVQGIRTSCGQSCGAPRRDCRHTCTAPCHPSSPCPDRRCGFAVAITCTCGRL 1304
Query: 523 SRTVEC 528
+ V C
Sbjct: 1305TTNVPC 1322
Score = 29.6 bits (65), Expect(3) = 0.0
Identities = 11/13 (84%), Positives = 12/13 (91%)
Frame = +2
Query: 892 KVHVFCPMIKDKR 904
K HVFCPM+KDKR
Sbjct: 1670 KSHVFCPMLKDKR 1708
Score = 22.3 bits (46), Expect(3) = 0.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 881 LGKSKGTTHGLKVHVF 896
L + K TTHGLK+ F
Sbjct: 1636 LARVKETTHGLKIPCF 1683
>CB894543 similar to PIR|D86236|D86 protein F14N23.5 [imported] - Arabidopsis
thaliana, partial (6%)
Length = 454
Score = 201 bits (511), Expect = 1e-51
Identities = 103/151 (68%), Positives = 122/151 (80%), Gaps = 6/151 (3%)
Frame = +1
Query: 924 EPKRFIVISATQKSKAPARVLGVKGTTTLNAPLPTAFDPLVDMDPRLVVSFPDLPRDADI 983
EPK+FIV+ QKS+AP+RVLG+KGTTT+ + LP AF+ LVDMDPRLVVSFPDLPRD +I
Sbjct: 1 EPKKFIVVHVVQKSRAPSRVLGIKGTTTIPSLLPPAFNSLVDMDPRLVVSFPDLPRDTNI 180
Query: 984 SALVLRFGGECELVWLNDRNALAVFHDPARAATAMRRLDHGTVYQGAVSFVQNAGASAAS 1043
ALVLRFGGECELVWLND+NALAVF+DPAR+ATAMRRLDHG+VYQGA+ V N G S AS
Sbjct: 181 CALVLRFGGECELVWLNDKNALAVFNDPARSATAMRRLDHGSVYQGAIVAVPNTGTSVAS 360
Query: 1044 SVTSAWGG---TKEGALRS---NPWKKAAVL 1068
SVT+ GG K GAL + WK+A ++
Sbjct: 361 SVTTDRGGAETVKGGALTTLTGYMWKQAVII 453
>TC92743 similar to GP|9759091|dbj|BAB09660.1 contains similarity to unknown
protein~gb|AAF47871.1~gene_id:MJJ3.6 {Arabidopsis
thaliana}, partial (14%)
Length = 662
Score = 86.3 bits (212), Expect(2) = 3e-20
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Frame = +2
Query: 172 NMAGRQYGSRDSSLPQLVQEIQEKLTKGTVECMICYDMVRRSAPIWSCSS-CYSIFHLNC 230
N +G + S+ +Q + G + C+IC + ++ S P WSC+S C+++FHL C
Sbjct: 146 NFSGHSSTNATSADLSKIQSFLTSSSSGALSCLICLERIKPSDPTWSCTSLCFAVFHLFC 325
Query: 231 IKKW---------ARAPTSVDLSAEKNLGFN-WRCPGCQSVQHTSSKDIKYACFCGKRVD 280
I+ W +RA T + +SAE + W CP C+ S Y CFCGK +
Sbjct: 326 IQSWSRQASDLAASRAVTRLSVSAEHAAETSLWNCPKCRVEYPKSLIPKIYFCFCGKLEN 505
Query: 281 PPS-DLYLTPHSCGE 294
PPS D + PHSCGE
Sbjct: 506 PPSDDPWGLPHSCGE 550
Score = 31.6 bits (70), Expect(2) = 3e-20
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 317 HACVLQCHPGPCPPCKAF 334
H C+L HPGPCP C F
Sbjct: 586 HYCLLL*HPGPCPSCPQF 639
>CB065349 similar to SP|P10713|CONX_N Conidiation-specific protein 10.
{Neurospora crassa}, partial (27%)
Length = 597
Score = 42.4 bits (98), Expect = 0.001
Identities = 44/159 (27%), Positives = 59/159 (36%), Gaps = 19/159 (11%)
Frame = -1
Query: 621 SIPPPLPCGTMPPLCQL-PCSVPQPCGHSG------SHSCHFGDCPP----CSVPVSKEC 669
S+P G P + Q+ CS P +SG H C PP C S+E
Sbjct: 579 SLPAASARGRAPAVAQVCRCSAFAPRIYSGRYPGSHDHRCPDRSTPPAKSGCPTRQSRET 400
Query: 670 VGGHVILRNIPCGSNN-------IKCNNPCGRTRQCG-LHACGRSCHSPPCDILPGIVKG 721
+V+ C + + + +PCG TR G GR C L + +G
Sbjct: 399 GAWYVLRHE*VCSARSPWHRAASLTTGHPCGPTRCYGHFQTAGRLCGR-----LRKLSRG 235
Query: 722 LRAACGQTCGAPRSGCRHMCMALCHPGCPCPDARCEFPV 760
+C +C P GCR C CPC D C F V
Sbjct: 234 RWRSCPGSCCCP--GCRCGCCL----SCPCSDTSCGFRV 136
>AW684389 similar to GP|9759091|dbj contains similarity to unknown
protein~gb|AAF47871.1~gene_id:MJJ3.6 {Arabidopsis
thaliana}, partial (16%)
Length = 656
Score = 41.2 bits (95), Expect = 0.002
Identities = 18/52 (34%), Positives = 24/52 (45%), Gaps = 1/52 (1%)
Frame = +2
Query: 725 ACGQTCGAPRSGCRHMCMALCHPG-CPCPDARCEFPVTITCSCGRISANVPC 775
+CG C C H+C CHPG C P+ +C VT+ C C + C
Sbjct: 2 SCGGPCHRKMPNCTHLCPETCHPGECRNPE-KCSKKVTVRCKCQTLKKEWLC 154
Score = 37.7 bits (86), Expect = 0.026
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 423 SCGSNCGNVLGCSNHICREVCHPGSCGECEFLPSRVKA-CCCGKTKLE 469
SCG C + H+C E CHPG C E +V C C K E
Sbjct: 2 SCGGPCHRKMPNCTHLCPETCHPGECRNPEKCSKKVTVRCKCQTLKKE 145
Score = 37.7 bits (86), Expect = 0.026
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Frame = +2
Query: 481 TCSKVCSKTLRCGVHACKETCHVGEC---PPCKVLISQKCRCGSTSRTVECYKTTENQKF 537
+C C + + H C ETCH GEC C ++ +C+C + + C
Sbjct: 2 SCGGPCHRKMPNCTHLCPETCHPGECRNPEKCSKKVTVRCKCQTLKKEWLCQDVQAAHNR 181
Query: 538 TCQKPCGAKKN---CGRHRCSEKC 558
P KN G C+ C
Sbjct: 182 AGCNPSDVPKNQFGVGLIPCNSDC 253
Score = 32.7 bits (73), Expect = 0.84
Identities = 20/61 (32%), Positives = 22/61 (35%)
Frame = +2
Query: 291 SCGEPCGKPLEKEVFVTEERKDELCPHACVLQCHPGPCPPCKAFAPPRLCPCGKKRIATR 350
SCG PC RK C H C CHPG C P C K++ R
Sbjct: 2 SCGGPC------------HRKMPNCTHLCPETCHPGEC------RNPEKC---SKKVTVR 118
Query: 351 C 351
C
Sbjct: 119 C 121
Score = 32.3 bits (72), Expect = 1.1
Identities = 19/86 (22%), Positives = 31/86 (35%), Gaps = 16/86 (18%)
Frame = +2
Query: 359 TCGQRCDKLLDCGRHHCENACHVGPC---DPCQVLIEASCFCSKMTQVLFCGEM------ 409
+CG C + + H C CH G C + C + C C + + C ++
Sbjct: 2 SCGGPCHRKMPNCTHLCPETCHPGECRNPEKCSKKVTVRCKCQTLKKEWLCQDVQAAHNR 181
Query: 410 -------AMKGEFEAEGGVFSCGSNC 428
K +F G+ C S+C
Sbjct: 182 AGCNPSDVPKNQFGV--GLIPCNSDC 253
>CA860193 similar to GP|21039795|gb| hypothetical protein {Dictyostelium
discoideum}, partial (6%)
Length = 379
Score = 39.7 bits (91), Expect = 0.007
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Frame = +2
Query: 16 PSHRPPRQEWIPKGAG---------ASSSASTTSTTTTASTTTAAAATTTVDQPTSLHSH 66
P H Q+WI K G SS S+TST++T+STT ATTTV T+ +
Sbjct: 29 PHHTGTLQDWIIKFWGEEINSTTTTTSSVLSSTSTSSTSSTTIPVVATTTVSSTTTSATS 208
Query: 67 EKNTNSDGGSSNQGAVVAPT 86
+ S S++ +P+
Sbjct: 209 ATSATSSSTSTSSSPSSSPS 268
>TC88616 weakly similar to PIR|T48209|T48209 hypothetical protein T20L15.150
- Arabidopsis thaliana, partial (27%)
Length = 1148
Score = 37.7 bits (86), Expect = 0.026
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +2
Query: 187 QLVQEIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSVDLSAE 246
Q QE + ++K VEC +C +V + +C FH+ CI KW
Sbjct: 455 QKQQEENKNVSKNIVECAVCLSVVEDEEMMRLLPNCKHSFHVGCIDKW------------ 598
Query: 247 KNLGFNWRCPGCQS 260
L + CP C++
Sbjct: 599 --LASHSTCPNCRT 634
>TC77205 similar to GP|19347753|gb|AAL86301.1 putative RING-H2 zinc finger
protein ATL6 {Arabidopsis thaliana}, partial (38%)
Length = 1317
Score = 37.0 bits (84), Expect = 0.045
Identities = 18/66 (27%), Positives = 28/66 (42%)
Frame = +3
Query: 195 KLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKWARAPTSVDLSAEKNLGFNWR 254
K+ KG +EC +C + S + C +FH CI +W LG +
Sbjct: 366 KIGKGALECAVCLNEFEESETLRLIPKCDHVFHPECIDEW--------------LGSHTT 503
Query: 255 CPGCQS 260
CP C++
Sbjct: 504 CPVCRA 521
>TC87819 similar to GP|16209696|gb|AAL14405.1 AT5g20880/F22D1_50
{Arabidopsis thaliana}, partial (28%)
Length = 1121
Score = 37.0 bits (84), Expect = 0.045
Identities = 27/109 (24%), Positives = 40/109 (35%), Gaps = 1/109 (0%)
Frame = +1
Query: 176 RQYGSRDSSLPQL-VQEIQEKLTKGTVECMICYDMVRRSAPIWSCSSCYSIFHLNCIKKW 234
+QY S LP EI+E+ + C +C + ++ + +C +FH CI KW
Sbjct: 451 QQYSSCCQMLPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDKW 630
Query: 235 ARAPTSVDLSAEKNLGFNWRCPGCQSVQHTSSKDIKYACFCGKRVDPPS 283
N N CP C++ S CG PS
Sbjct: 631 LE-------HGHDNENHNQTCPLCRAPLINSYSLSSEISSCGFSPPQPS 756
>TC80581 similar to GP|19683021|gb|AAL92644.1 hypothetical protein
{Dictyostelium discoideum}, partial (5%)
Length = 850
Score = 37.0 bits (84), Expect = 0.045
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 4/38 (10%)
Frame = +3
Query: 29 GAGASSSASTTSTTTTA----STTTAAAATTTVDQPTS 62
GA ++S+A+TT+TT+TA S+TTAAAAT T TS
Sbjct: 642 GATSASAAATTTTTSTAAATTSSTTAAAATATTTNSTS 755
Score = 34.3 bits (77), Expect = 0.29
Identities = 16/46 (34%), Positives = 27/46 (57%)
Frame = +3
Query: 33 SSSASTTSTTTTASTTTAAAATTTVDQPTSLHSHEKNTNSDGGSSN 78
++SAS +TTTT ST A ++TT T+ ++ + +D GS +
Sbjct: 645 ATSASAAATTTTTSTAAATTSSTTAAAATATTTNSTSAAADAGSED 782
>TC82882 similar to GP|20258832|gb|AAM13898.1 unknown protein {Arabidopsis
thaliana}, partial (14%)
Length = 526
Score = 36.6 bits (83), Expect = 0.058
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 19/88 (21%)
Frame = +3
Query: 183 SSLPQLVQEIQEKLTKG-TVECMICYDM-----VRRSAP-------------IWSCSSCY 223
++LP +V+ + K+ + T +C++C D+ R+ I C SC
Sbjct: 252 AALPVMVETVSRKILEHITDQCLVCCDVGIPCSARQDCSDPSSLIFPFQEDDIERCKSCQ 431
Query: 224 SIFHLNCIKKWARAPTSVDLSAEKNLGF 251
S+FH +C +K + P L K+ F
Sbjct: 432 SVFHKHCFRKLSNCPCGEQLRLNKSRSF 515
>BG457583 similar to GP|13561982|gb flagelliform silk protein {Argiope
trifasciata}, partial (8%)
Length = 269
Score = 35.8 bits (81), Expect = 0.099
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Frame = +1
Query: 89 RHRSNHHVAHRVEREHVAHR-TDRDHVAHRVERERVAHRVEREHVAHRMEREHVA---HR 144
RH +H R H HR +DRDH HR R R R HR ++H A R
Sbjct: 25 RHEEDH-------RGHQGHRASDRDHQGHRGHRALGQGRQGRHEEDHRDRQDHRASDRDR 183
Query: 145 VEREHVAH------RVEREHVAH 161
++++H H ++++H H
Sbjct: 184 LDQDHQGHLASDRGHLDQDHQGH 252
>BQ144197 homologue to GP|1841930|emb| ROX protein {Mus musculus}, partial
(4%)
Length = 1170
Score = 34.7 bits (78), Expect = 0.22
Identities = 43/174 (24%), Positives = 58/174 (32%), Gaps = 24/174 (13%)
Frame = +2
Query: 14 RFPSHRPPRQEWIPKGAGASSSASTTSTTTTASTTTAAAATTTVDQPTS--LHSHEKNTN 71
R+P HR R P T A A T + L + K +
Sbjct: 488 RYPQHRKKR----PTHTRTERKTENTKMKGPAPGARVAHHQTRKQRARGRRLQRNNKQST 655
Query: 72 SDGGSSNQGAVVAPTFARHRSNHHVAHRVEREHV-AHRTDRDHVAHRVERERVA----HR 126
G SN+G + + + R+ + R+DR+ AHR RER + HR
Sbjct: 656 HGKGGSNRGRKGSVKARQKHCRTPPTQKKGRDAARSTRSDRETTAHR**RERSSENKEHR 835
Query: 127 VEREHVAHRMERE---------------HVAHRVEREHVAHRVE--REHVAHRV 163
E A R E+E A ER H HR R H HR+
Sbjct: 836 AETRERAERAEKERRSRAQCQRCKIINRETALTRERAHTTHREREARPHTTHRI 997
Score = 23.1 bits (48), Expect(3) = 8.5
Identities = 8/23 (34%), Positives = 12/23 (51%)
Frame = -2
Query: 541 KPCGAKKNCGRHRCSEKCCPLSG 563
+P ++ G CS + CPL G
Sbjct: 194 RPPPCRRRRGMSACSREACPLGG 126
Score = 21.6 bits (44), Expect(3) = 8.5
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 567 GLTTPDWDPHFCSMLCGK 584
G +P W FCS+ GK
Sbjct: 147 GGLSPRWSSRFCSLQPGK 94
Score = 20.8 bits (42), Expect(3) = 8.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 623 PPPLPCGTMPPLCQLPCSVPQPCGHSGS 650
PPP T P L P S+P P G+
Sbjct: 89 PPPCLFQTSPFLLAPPRSLPPPPRRPGA 6
>TC79191 similar to GP|2306979|gb|AAB65792.1| metallothionein-II protein
{Glycine max}, partial (47%)
Length = 497
Score = 34.7 bits (78), Expect = 0.22
Identities = 20/69 (28%), Positives = 26/69 (36%), Gaps = 2/69 (2%)
Frame = +3
Query: 679 IPC-GSNNIKCNNPCGRTR-QCGLHACGRSCHSPPCDILPGIVKGLRAACGQTCGAPRSG 736
+PC G + +C N G CG C PC +V G CG TC
Sbjct: 138 VPCAGDSTCRCTNSEGGANINHSTCPCGEHCECNPCSCPNTVVAGTGCRCGTTCTCASCR 317
Query: 737 CRHMCMALC 745
+ M+LC
Sbjct: 318 S*NESMSLC 344
>BQ137255 homologue to PIR|B34768|B347 ORF5 protein - Orf virus (strain NZ2),
partial (10%)
Length = 1161
Score = 34.7 bits (78), Expect = 0.22
Identities = 51/183 (27%), Positives = 72/183 (38%), Gaps = 6/183 (3%)
Frame = +2
Query: 5 QRRERREGSRFPSHRPPRQEWIPKGAGASSSASTTSTTTT-ASTTTAAAATTTVDQPTSL 63
+RR RE R P+ P P+ A A S+ + +T + A TTA+AAT Q ++
Sbjct: 614 RRRTTRERRRRPTAPPT-----PRAARARSAQTARATRASGARPTTASAAT----QASTQ 766
Query: 64 HSHEKNTNSDGGSSNQGAVVAPTFARHRSNHHVAHRVEREHVAHRTDRDHVAHRVERERV 123
S E T++ + +G A R + H R + R RD A R ER
Sbjct: 767 QSGETRTSTAQHTGRRGR-RARRRDRRKRRHARRARTPARFASARVARDGSA-RATDERA 940
Query: 124 AHRVEREHVAHRME---REHVAHRVEREHVAHRVEREHVAHRVERG--RGRSGNMAGRQY 178
R + R H R++ A R ER R RG RG G +
Sbjct: 941 TRTTGDTRTRTRRDASARGRSRHARSRDNDARRRERS-TTRRDARGRVRGARARARGGAH 1117
Query: 179 GSR 181
G+R
Sbjct: 1118GTR 1126
>TC93358 weakly similar to GP|7303636|gb|AAF58688.1| CG13214-PA {Drosophila
melanogaster}, partial (7%)
Length = 611
Score = 34.7 bits (78), Expect = 0.22
Identities = 32/119 (26%), Positives = 52/119 (42%), Gaps = 4/119 (3%)
Frame = -1
Query: 33 SSSASTTSTTTTASTTTAAAATTTVDQPTSLHSHEKNTNSDGGSSN-QGAVVAPTFARHR 91
S+ +STT+T+TT+ TT ++T T PT+ T S + A T+A+
Sbjct: 611 STPSSTTTTSTTSPTTKTLSSTPTTASPTTPRIILSITCVTVAESRAKTTTAAATYAKST 432
Query: 92 SNHH---VAHRVEREHVAHRTDRDHVAHRVERERVAHRVEREHVAHRMEREHVAHRVER 147
S+ V +R R +T R H H + R R A ++R+H R ++
Sbjct: 431 SSRRW*KVRNRGNRS--GSKTSRVHEMHMEQHRTEQGRRGRNSAAA*VQRDHCDGREKK 261
>TC92977 similar to GP|15528625|dbj|BAB64646. putative splicing factor-like
protein {Oryza sativa (japonica cultivar-group)},
partial (10%)
Length = 733
Score = 34.7 bits (78), Expect = 0.22
Identities = 19/36 (52%), Positives = 22/36 (60%)
Frame = -2
Query: 27 PKGAGASSSASTTSTTTTASTTTAAAATTTVDQPTS 62
P GA++SA T +T TTA TTT A A TT TS
Sbjct: 141 PSFLGAAASAITATTATTAWTTTTAIAATTRPAATS 34
>TC79918 similar to PIR|T06671|T06671 hypothetical protein T17F15.10 -
Arabidopsis thaliana, partial (39%)
Length = 1269
Score = 34.7 bits (78), Expect = 0.22
Identities = 40/149 (26%), Positives = 56/149 (36%), Gaps = 1/149 (0%)
Frame = +1
Query: 36 ASTTSTTTTASTTTAAAATTTVDQPTSLHSHEKNTNSDGGSSNQGAVVAPTFARHRSNHH 95
AS++STTTTASTT A + D+ + L S + PT +
Sbjct: 205 ASSSSTTTTASTT----APSDSDRKSQLQSIQNKLKK-----------KPT-----TESR 324
Query: 96 VAHRVEREHVAHRTDRDHVAHRV-ERERVAHRVEREHVAHRMEREHVAHRVEREHVAHRV 154
V+ + R++ + +DR R RER R R R + R
Sbjct: 325 VSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGR 504
Query: 155 EREHVAHRVERGRGRSGNMAGRQYGSRDS 183
R V+RGR R GR+ G R S
Sbjct: 505 SRSRSDSDVDRGRDRRKRERGREKGRRRS 591
>BG644345 weakly similar to GP|19697333|gb putative protein potential
transcriptional repressor Not4hp - Mus musculus, partial
(7%)
Length = 635
Score = 34.3 bits (77), Expect = 0.29
Identities = 14/25 (56%), Positives = 22/25 (88%)
Frame = +3
Query: 33 SSSASTTSTTTTASTTTAAAATTTV 57
S++ +TT+TTT+A+TTT +ATTT+
Sbjct: 339 SAATATTTTTTSATTTTTTSATTTI 413
Score = 32.3 bits (72), Expect = 1.1
Identities = 14/24 (58%), Positives = 22/24 (91%)
Frame = +3
Query: 33 SSSASTTSTTTTASTTTAAAATTT 56
+++++TT+TTT+A+TT A AATTT
Sbjct: 363 TTTSATTTTTTSATTTIAIAATTT 434
Score = 32.3 bits (72), Expect = 1.1
Identities = 24/90 (26%), Positives = 40/90 (43%), Gaps = 3/90 (3%)
Frame = +3
Query: 16 PSHRPPRQEWIPKGAGASSSASTTS---TTTTASTTTAAAATTTVDQPTSLHSHEKNTNS 72
P+ RP I ++A+TTS T T +TTT+A TTT T++ T +
Sbjct: 261 PNSRPATAVAILSDHSLFATATTTSISAATATTTTTTSATTTTTTSATTTIAIAATTTTT 440
Query: 73 DGGSSNQGAVVAPTFARHRSNHHVAHRVER 102
+S A F + + H+ +++ R
Sbjct: 441 AAATSVITAATIVPFHQR*DSCHLQYQMGR 530
>BF641220 weakly similar to PIR|G86203|G86 probable N-arginine dibasic
convertase [imported] - Arabidopsis thaliana, partial
(5%)
Length = 634
Score = 33.1 bits (74), Expect = 0.64
Identities = 21/57 (36%), Positives = 30/57 (51%), Gaps = 3/57 (5%)
Frame = -2
Query: 1100 APIPASLNPW---NVLNHESSSSSSPATVIRSVASGKQTESGNVSTKVEPSAGGADG 1153
AP P SL + + SSSSSSP++ S +S + S + S+ +EPS G G
Sbjct: 498 APFPPSLPXTXXSSSSSXSSSSSSSPSSSSSSSSSSSSSSSSSSSSSIEPSFGAPSG 328
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.320 0.134 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,762,694
Number of Sequences: 36976
Number of extensions: 1102415
Number of successful extensions: 7433
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 6226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7106
length of query: 1173
length of database: 9,014,727
effective HSP length: 107
effective length of query: 1066
effective length of database: 5,058,295
effective search space: 5392142470
effective search space used: 5392142470
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Medicago: description of AC141436.6