TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141436.3 + phase: 0 /pseudo
         (223 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like...    59  1e-09
CB891859 similar to GP|6175165|gb| Mutator-like transposase {Ara...    55  2e-08
AL375901 similar to GP|9759134|dbj mutator-like transposase-like...    38  0.003
AL375902 similar to GP|9759134|dbj mutator-like transposase-like...    32  0.19
TC91849                                                                30  0.56
TC79067 similar to PIR|T45816|T45816 hypothetical protein F28O9....    29  1.3
TC90650 similar to GP|11994314|dbj|BAB02273. ankyrin-like protei...    29  1.6
TC85177 similar to PIR|S56655|S56655 lipoxygenase (EC 1.13.11.12...    29  1.6
BF646328 similar to PIR|F84533|F845 Mutator-like transposase [im...    28  2.8
TC76338 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, pa...    27  4.8

>TC79804 weakly similar to GP|6175165|gb|AAF04891.1| Mutator-like transposase
            {Arabidopsis thaliana}, partial (57%)
          Length = 2129

 Score = 59.3 bits (142), Expect = 1e-09
 Identities = 48/211 (22%), Positives = 85/211 (39%), Gaps = 5/211 (2%)
 Frame = +1

Query: 2    RSFKDGELKKKVEGMGYAMNIPTFEYYRSEIDVADRKALAWVDNIPKQKWNQSHDDGRRW 61
            + FK+  L   +    YA  I  F    +EI+     A  W+ +    +W   + +G R+
Sbjct: 1060 KEFKNSRLIHLLWSAAYATTINAFREKMAEIEEVSPNASMWLQHFHPSQWALVYFEGTRY 1239

Query: 62   GHMTSNLVESQNNVYKGIRGLPITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSM 121
            GH++SN+ E    + +  + LPI  +++    +L   F  R  ++++  +   P SE  M
Sbjct: 1240 GHLSSNIEEFNKWILEA-QELPIIQVIERIQSKLKTEFDDRRLKSSSWCSVLTPSSERRM 1416

Query: 122  KYLRN-----EVIKSNSHHVTQFDRDRYTFSVRETIEHKEGLPKGEYKVDLQNKWCDCGR 176
                N     +V+KS+         DR                     V++ +  C C  
Sbjct: 1417 VEAINRASTYQVLKSDEVEFEVISADRSDI------------------VNIGSHSCSCRD 1542

Query: 177  FRALHLPCSHVIAACSSFSHDYKTFVDNKFT 207
            ++   +PCSH +AA  S   D   +    FT
Sbjct: 1543 WQLYGIPCSHAVAALISSRKDVYAYTAKCFT 1635


>CB891859 similar to GP|6175165|gb| Mutator-like transposase {Arabidopsis
           thaliana}, partial (27%)
          Length = 625

 Score = 55.1 bits (131), Expect = 2e-08
 Identities = 38/155 (24%), Positives = 74/155 (47%)
 Frame = +1

Query: 20  MNIPTFEYYRSEIDVADRKALAWVDNIPKQKWNQSHDDGRRWGHMTSNLVESQNNVYKGI 79
           + I  FE    EI+   + A  W+  +P + W  ++ +G R+GH+T+N+VE+ N+     
Sbjct: 196 LTIIEFEGKVMEIEEISQDAAYWIRRVPPRLWATAYFEGHRFGHLTANIVEALNSWILEA 375

Query: 80  RGLPITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEVIKSNSHHVTQF 139
            GLPI  +++    +L   F +R   +    +   P +E S   +   + ++ ++ V + 
Sbjct: 376 SGLPIIQMMECIRRQLMTWFNERRETSMQWTSILVPSAERS---VAEALERARTYQVLRA 546

Query: 140 DRDRYTFSVRETIEHKEGLPKGEYKVDLQNKWCDC 174
           +   +     E I H     +G   VD++N+ C C
Sbjct: 547 NEAEF-----EVISH-----EGTNIVDIRNRCCLC 621


>AL375901 similar to GP|9759134|dbj mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (27%)
          Length = 493

 Score = 38.1 bits (87), Expect = 0.003
 Identities = 23/100 (23%), Positives = 44/100 (44%)
 Frame = +3

Query: 3   SFKDGELKKKVEGMGYAMNIPTFEYYRSEIDVADRKALAWVDNIPKQKWNQSHDDGRRWG 62
           +FK+ +L        YA+    FE   +E+    +  ++W  + P   W  ++ DG R+G
Sbjct: 66  TFKNTKLVNIFWNAVYALTAAEFESKITEMIEVSQDVISWFQHFPPFLWAVAYFDGVRYG 245

Query: 63  HMTSNLVESQNNVYKGIRGLPITAIVKASYYRLAALFAKR 102
           H T  + E   N       LP+  +++    ++ + F  R
Sbjct: 246 HFTLGVTELLYNWALECHELPVVQMMEYIRQQMTSWFNDR 365


>AL375902 similar to GP|9759134|dbj mutator-like transposase-like protein
           {Arabidopsis thaliana}, partial (20%)
          Length = 542

 Score = 32.0 bits (71), Expect = 0.19
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +2

Query: 168 QNKWCDCGRFRALHLPCSHVIAACSSFSHDYKTFVDNKFTNECVYAVYN 216
           +++ C C R++    PC+H  AA  S  H+   F +  FT +     Y+
Sbjct: 2   RSRECSCRRWQLYGYPCAHAAAALISCGHNAHMFAEPCFTVQSYRMAYS 148


>TC91849 
          Length = 702

 Score = 30.4 bits (67), Expect = 0.56
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = -1

Query: 116 FSENSMKYLRNEVIKSNSHHVTQFDRDRYTFSVRETI 152
           FS+    +L N + + ++H ++   R+ YTFS+RET+
Sbjct: 441 FSDKRYYFLLNSMCEDHNHILSNSYRNLYTFSLRETM 331


>TC79067 similar to PIR|T45816|T45816 hypothetical protein F28O9.230 -
            Arabidopsis thaliana, partial (75%)
          Length = 1979

 Score = 29.3 bits (64), Expect = 1.3
 Identities = 26/110 (23%), Positives = 44/110 (39%)
 Frame = +3

Query: 69   VESQNNVYKGIRGLPITAIVKASYYRLAALFAKRGHEAAARVNSGEPFSENSMKYLRNEV 128
            V ++++V  G+ G  +T  +      +       G   AA    GEP  +  +KY+  E+
Sbjct: 1395 VLNESDVMIGVHGAAMTHFMFMKPKSVFIQVVPLGTNWAADTYYGEPARKLGLKYIGYEI 1574

Query: 129  IKSNSHHVTQFDRDRYTFSVRETIEHKEGLPKGEYKVDLQNKWCDCGRFR 178
                S    ++D+        E+I  K      +  +D QN   D  RFR
Sbjct: 1575 HPKESSLYERYDKSDPILRDPESINKKGWEYTKKIYLDSQNVKLDLRRFR 1724


>TC90650 similar to GP|11994314|dbj|BAB02273. ankyrin-like protein
           {Arabidopsis thaliana}, partial (12%)
          Length = 684

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 188 IAACSSFSHDYKTFVDNKFTNE 209
           +  CSSFSH   T  D+KFT +
Sbjct: 303 VPICSSFSHSCHTLTDSKFTQQ 238


>TC85177 similar to PIR|S56655|S56655 lipoxygenase (EC 1.13.11.12) loxG -
            garden pea, partial (75%)
          Length = 2646

 Score = 28.9 bits (63), Expect = 1.6
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 169  NKWCDCGRFRALHLPCSHVIAACSSFSHDYKTF 201
            ++WCDC + R L +    VI   S   H+  TF
Sbjct: 2154 HQWCDCSQIRLLEVLSKLVILRGSFLRHESSTF 2056


>BF646328 similar to PIR|F84533|F845 Mutator-like transposase [imported] -
           Arabidopsis thaliana, partial (3%)
          Length = 636

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 162 EYKVDLQNKWCDCGRFRALHLPCSHVI 188
           +Y V+L  + C C ++    +PC+HVI
Sbjct: 414 KYIVNLAQRTCACRKWNLTGIPCAHVI 334


>TC76338 PIR|S17435|S17435 polyubiquitin 6 - common sunflower, partial (80%)
          Length = 1172

 Score = 27.3 bits (59), Expect = 4.8
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
 Frame = +2

Query: 147  SVRETIEHKEGLPKGEYKVDL----QNKWCDCGR 176
            +V+  I+ KEG+P  + KVDL      +W D GR
Sbjct: 1043 NVKAKIQDKEGIPPDQQKVDLCWEAA*RWPDSGR 1144


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.135    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,089,713
Number of Sequences: 36976
Number of extensions: 98776
Number of successful extensions: 511
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of query: 223
length of database: 9,014,727
effective HSP length: 93
effective length of query: 130
effective length of database: 5,575,959
effective search space: 724874670
effective search space used: 724874670
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)