TBLASTN 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141323.12 + phase: 0 /pseudo
         (133 letters)

Database: MTGI 
           36,976 sequences; 27,044,181 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

TC91058 similar to PIR|T52392|T52392 hypothetical protein MMB12....    29  0.47
TC77355 weakly similar to PIR|T05552|T05552 SRG1 protein-related...    28  1.4
BG647919 similar to GP|20161480|db putative inositol-1  4  5-tri...    27  3.1
BG586348 similar to GP|20465587|gb unknown protein {Arabidopsis ...    26  4.0
BF641474 similar to GP|7293203|gb| CG9914 gene product {Drosophi...    25  6.8

>TC91058 similar to PIR|T52392|T52392 hypothetical protein MMB12.11
           [imported] - Arabidopsis thaliana, partial (22%)
          Length = 783

 Score = 29.3 bits (64), Expect = 0.47
 Identities = 16/53 (30%), Positives = 26/53 (48%)
 Frame = +3

Query: 40  EGYTVEADKSIKDLTVIREYVGDIDFLKNREYDDGDRIMTLLSASNPSQSLVV 92
           E Y V+ D ++  L+ +REYV D +   N   DD    +  +     + +LVV
Sbjct: 213 EAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVV 371


>TC77355 weakly similar to PIR|T05552|T05552 SRG1 protein-related protein
           F24A6.150 - Arabidopsis thaliana, partial (44%)
          Length = 1359

 Score = 27.7 bits (60), Expect = 1.4
 Identities = 24/72 (33%), Positives = 34/72 (46%), Gaps = 2/72 (2%)
 Frame = +1

Query: 48  KSIKDLTVIREYVGD-IDFLKNREYDDGD-RIMTLLSASNPSQSLVVFPDKRSNIAPFIT 105
           K I D  VI   VGD I+ L N +Y   + R+MT  +    S +  +FP     + PF  
Sbjct: 817 KPISDALVIN--VGDVIEILSNGKYKSVEHRVMTNQNKRRISYASFLFPRDDVEVEPFDH 990

Query: 106 GIDNHTPEGNKK 117
            ID   P+  +K
Sbjct: 991 MIDAQNPKMYQK 1026


>BG647919 similar to GP|20161480|db putative inositol-1  4  5-trisphosphate
           5-phosphatase {Oryza sativa (japonica cultivar-group)},
           partial (29%)
          Length = 775

 Score = 26.6 bits (57), Expect = 3.1
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -2

Query: 19  LSRSMMERGECPLLMVVFDHAEGYTVEADK 48
           L +++ ++  CPL+   F H++G ++E+ K
Sbjct: 153 LRQAISQQVHCPLIQAHFQHSKGQSLESPK 64


>BG586348 similar to GP|20465587|gb unknown protein {Arabidopsis thaliana},
           partial (33%)
          Length = 755

 Score = 26.2 bits (56), Expect = 4.0
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 72  DDGDRIMTLLSASNPSQSLVVFPDKRSNIAPFI 104
           ++ D+++ L+ + NP    VV  D  +N APF+
Sbjct: 298 NERDQLLRLVKSLNPKLVTVVEQDVNTNTAPFL 396


>BF641474 similar to GP|7293203|gb| CG9914 gene product {Drosophila
           melanogaster}, partial (60%)
          Length = 666

 Score = 25.4 bits (54), Expect = 6.8
 Identities = 16/58 (27%), Positives = 31/58 (52%), Gaps = 3/58 (5%)
 Frame = +2

Query: 50  IKDLTVIREYVGDIDFLKNREYDDGDRIM---TLLSASNPSQSLVVFPDKRSNIAPFI 104
           +KD   ++E V +   LK + Y D D+++   T+LS+S  +    +F ++  + A  I
Sbjct: 293 VKDAVFVQECVPESLELKKKVYSDLDKVVDDKTILSSSTSTTLPSLFSEQMKHKAQVI 466


  Database: MTGI
    Posted date:  Oct 22, 2004  3:39 PM
  Number of letters in database: 27,044,181
  Number of sequences in database:  36,976
  
Lambda     K      H
   0.320    0.137    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,773,084
Number of Sequences: 36976
Number of extensions: 40361
Number of successful extensions: 185
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of query: 133
length of database: 9,014,727
effective HSP length: 86
effective length of query: 47
effective length of database: 5,834,791
effective search space: 274235177
effective search space used: 274235177
frameshift window, decay const: 50,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)