BLAST2 result
TBLASTN 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141322.2 - phase: 0
(233 letters)
Database: MTGI
36,976 sequences; 27,044,181 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BQ144079 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 40 6e-04
BQ144482 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 40 8e-04
BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich gl... 39 0.002
TC76827 similar to GP|17154773|gb|AAL35979.1 extensin-like prote... 39 0.002
TC93358 weakly similar to GP|7303636|gb|AAF58688.1| CG13214-PA {... 37 0.005
TC78080 similar to GP|16904226|gb|AAL30820.1 calcium/calmodulin-... 37 0.008
BQ144271 weakly similar to GP|21322711|em pherophorin-dz1 protei... 37 0.008
TC82284 weakly similar to GP|11119510|gb|AAF37724.2 diaphanous p... 36 0.011
TC88261 similar to PIR|S22697|S22697 extensin - Volvox carteri (... 36 0.011
BQ141742 weakly similar to PIR|T10798|T107 pherophorin-S - Volvo... 36 0.011
BQ144306 weakly similar to GP|23093252|gb| CG13731-PA {Drosophil... 36 0.014
BQ144168 similar to GP|6523547|emb| hydroxyproline-rich glycopro... 36 0.014
TC87806 similar to GP|21592931|gb|AAM64881.1 phosphoserine amino... 35 0.019
AL368332 weakly similar to GP|21322711|e pherophorin-dz1 protein... 35 0.032
BQ141909 weakly similar to GP|14253159|emb VMP3 protein {Volvox ... 35 0.032
BI264774 homologue to PIR|D49993|D49 ADP-ribosylation factor - A... 35 0.032
BQ144407 weakly similar to GP|6523547|emb| hydroxyproline-rich g... 35 0.032
BF634212 weakly similar to GP|10798748|dbj elicitor inducible ge... 34 0.042
TC76828 similar to GP|17154773|gb|AAL35979.1 extensin-like prote... 34 0.042
AJ502412 similar to GP|21592647|gb| unknown {Arabidopsis thalian... 34 0.042
>BQ144079 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (12%)
Length = 1071
Score = 40.4 bits (93), Expect = 6e-04
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 11/76 (14%)
Frame = +3
Query: 8 TQSLPLPMLTP-------FQRMFAHPNIPPLQQQ----PLPLTLNIPQPSHPPPPPPQDV 56
T P+P TP HP PL Q+ P+P + N P PPP PP
Sbjct: 600 TNPNPIPPATPPNPPPPRSATKIRHPTAKPLPQETQSHPIPESPNTPHSHTPPPRPPNPP 779
Query: 57 VDNHAPVRSRRRGPPR 72
+ ++ P R PPR
Sbjct: 780 IPHYPPRPYRANAPPR 827
Score = 30.0 bits (66), Expect = 0.79
Identities = 32/104 (30%), Positives = 38/104 (35%), Gaps = 22/104 (21%)
Frame = +2
Query: 5 EQPTQSLPLPMLTPFQRMFAHPNIP-PLQQQPLPLTLNIPQPSHPPPPPP---------- 53
+ PT P+P + R+ HP P P P P P+ P PPPP
Sbjct: 683 QAPTPRNPIPS---YPRVSEHPP*PYPPPPPPKP-------PNTPLPPPPIPRKRPPPTD 832
Query: 54 --QD---------VVDNHAPVRSRRRGPPRNGPIPTPFIWATDR 86
QD D HAP RR P P PT I AT +
Sbjct: 833 LRQDDNTYVHRSPRRDPHAPTA*RRYAPKHPNPHPTSPICATSQ 964
Score = 29.3 bits (64), Expect = 1.3
Identities = 15/36 (41%), Positives = 18/36 (49%)
Frame = +2
Query: 43 PQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPT 78
P P+ PP PP N P R+ PRN PIP+
Sbjct: 611 PYPARHPPQPPPPP*RNQNPAPHRQAPTPRN-PIPS 715
Score = 27.7 bits (60), Expect = 3.9
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +1
Query: 25 HPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIP 77
HPN P + TL+ P P PPP PV + G P P P
Sbjct: 568 HPNHPHPNARKRTQTLSRPPPPPTPPP----------PVAQPKSGTPPPSPYP 696
>BQ144482 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein DZ-HRGP
{Volvox carteri f. nagariensis}, partial (16%)
Length = 993
Score = 40.0 bits (92), Expect = 8e-04
Identities = 25/77 (32%), Positives = 29/77 (37%)
Frame = +3
Query: 3 DSEQPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAP 62
D P + P P P + P P P P L+ P PS PPPPP + P
Sbjct: 150 DRPPPPKVAPRPPFPPPLPFYLRPPSP----SPSPPPLSPPSPSPPPPPPQPLLGPGLRP 317
Query: 63 VRSRRRGPPRNGPIPTP 79
R PP P P P
Sbjct: 318 PGPRPPAPPPPAPAPRP 368
Score = 40.0 bits (92), Expect = 8e-04
Identities = 29/79 (36%), Positives = 32/79 (39%), Gaps = 8/79 (10%)
Frame = +2
Query: 9 QSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPP----PPPPQDVVDNHAPVR 64
QS P P +P PP P PL L++P PS P PPPP P
Sbjct: 167 QSRPAPTFSP----------PPPLLSPPPLPLSLPSPSFAPLPLPPPPPPSASPWPRPSP 316
Query: 65 SR----RRGPPRNGPIPTP 79
R R PPR GP P P
Sbjct: 317 PRPPAPRAPPPRPGPPPGP 373
Score = 35.0 bits (79), Expect = 0.025
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Frame = +1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNI--------PQPSHPPPPPPQDVVD 58
P+ S P P L P +F P PP P PL+L++ P P PPPPP
Sbjct: 205 PSISAPPPPLPPLP-LFRPPPPPP---PPPPLSLSLAPAFAPPAPGPPRPPPPP------ 354
Query: 59 NHAPVRSRRRGPPR--NGPIPTPFIWATDRR 87
P R R P R GP P W RR
Sbjct: 355 -RPPARPR---PARVLAGPAGRPRHWRASRR 435
>BQ144502 weakly similar to GP|6523547|emb hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (39%)
Length = 1358
Score = 38.5 bits (88), Expect = 0.002
Identities = 23/74 (31%), Positives = 27/74 (36%), Gaps = 5/74 (6%)
Frame = -2
Query: 3 DSEQPTQSLPLPMLTPFQRMFAHPNIPP-----LQQQPLPLTLNIPQPSHPPPPPPQDVV 57
D P PLP+ + + + P PP P P P P PPPPPP
Sbjct: 277 DRAPPPPPAPLPLASRLRPRASPPPPPPPPGPAASAPPRPPPPPPPPPQRPPPPPPPHTH 98
Query: 58 DNHAPVRSRRRGPP 71
P RR PP
Sbjct: 97 QPEPPTSPPRRQPP 56
Score = 35.8 bits (81), Expect = 0.014
Identities = 20/52 (38%), Positives = 23/52 (43%), Gaps = 1/52 (1%)
Frame = -2
Query: 29 PPLQQQPLPLTLNI-PQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
PP PLPL + P+ S PPPPPP + P PP P P P
Sbjct: 268 PPPPPAPLPLASRLRPRASPPPPPPPPGPAASAPPRPPPPPPPPPQRPPPPP 113
Score = 34.7 bits (78), Expect = 0.032
Identities = 21/68 (30%), Positives = 26/68 (37%), Gaps = 4/68 (5%)
Frame = -1
Query: 12 PLPMLTPFQRMFAHPNIP----PLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRR 67
P P L P R+ +P P P+ P P + PPPPPP AP+R
Sbjct: 614 PRPALVPLVRVATYPRPPRPPPPVPPPPSPPRAPPQSEAAPPPPPPPRGARPRAPLRPPS 435
Query: 68 RGPPRNGP 75
P P
Sbjct: 434 APDPAGHP 411
Score = 31.6 bits (70), Expect = 0.27
Identities = 23/70 (32%), Positives = 29/70 (40%)
Frame = -3
Query: 6 QPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRS 65
+P++ +P P P A P P Q P + P P+ PP PP AP R
Sbjct: 591 RPSRYIPPPTSPPP----ASPPAPVPPQSPSTIRGRAPPPAPPPRRPPARPPP--APQRP 430
Query: 66 RRRGPPRNGP 75
R R PP P
Sbjct: 429 RPRRPPARPP 400
Score = 31.2 bits (69), Expect = 0.35
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = -3
Query: 43 PQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGP 75
P P PPPPPP + P R GPPR P
Sbjct: 198 PPPPGPPPPPP---LGPRPPPHPPRSGPPRPHP 109
Score = 31.2 bits (69), Expect = 0.35
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3
Query: 42 IPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
IP P+ PPP P V +P R R PP P P P
Sbjct: 576 IPPPTSPPPASPPAPVPPQSPSTIRGRAPP---PAPPP 472
Score = 30.4 bits (67), Expect = 0.61
Identities = 24/72 (33%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Frame = -1
Query: 12 PLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHP--PPPPPQDV----VDNHAPVRS 65
P P TP + A IPP P P + PS P PP PP HAP +
Sbjct: 263 PAPGPTPLSKPPAAEGIPPATAPP-PRARRLRPPSAPAPPPTPPAAAPPAPTPPHAPA*A 87
Query: 66 RRRGPPRNGPIP 77
PP P P
Sbjct: 86 PHLPPPPPAPRP 51
Score = 29.3 bits (64), Expect = 1.3
Identities = 19/53 (35%), Positives = 24/53 (44%)
Frame = -2
Query: 27 NIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
++ P +Q P P P+P H P P P AP R+ GPP PTP
Sbjct: 565 HLAPPRQSPRPRPP--PEPLHNPRPRPPPRPPPAAPARAPPSGPPAP---PTP 422
Score = 29.3 bits (64), Expect = 1.3
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -2
Query: 33 QQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIPTP 79
Q P+P +P P PPPP + AP+ R PR P P P
Sbjct: 334 QSPVPCPA-LPHPPGPPPPLDRAPPPPPAPLPLASRLRPRASPPPPP 197
Score = 28.5 bits (62), Expect = 2.3
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -1
Query: 24 AHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIP 77
AHP PL LP P PPPPPP+ P+ + G PR +P
Sbjct: 713 AHPAATPL----LP-------PPRPPPPPPE---WERVPLAKKIGGQPRPALVP 594
Score = 27.3 bits (59), Expect = 5.1
Identities = 22/68 (32%), Positives = 24/68 (34%)
Frame = -1
Query: 12 PLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPP 71
PLP P P PP P P P P PP P R+RR PP
Sbjct: 323 PLPRPPP-------PTRPPAAPGPGPPPAPGPTPLSKPPAAEGIPPATAPPPRARRLRPP 165
Query: 72 RNGPIPTP 79
+ P P P
Sbjct: 164 -SAPAPPP 144
Score = 26.9 bits (58), Expect = 6.7
Identities = 16/46 (34%), Positives = 18/46 (38%), Gaps = 7/46 (15%)
Frame = -2
Query: 43 PQPSHPPPPPPQDVVDNHAPVRSRRRG-------PPRNGPIPTPFI 81
P H P PPPQ P R RR PP + P P P +
Sbjct: 787 PPSPHRPAPPPQ-----AHPARERRTASLARTPPPPPSSPPPAPLL 665
>TC76827 similar to GP|17154773|gb|AAL35979.1 extensin-like protein {Cucumis
sativus}, partial (60%)
Length = 1093
Score = 38.5 bits (88), Expect = 0.002
Identities = 25/69 (36%), Positives = 29/69 (41%)
Frame = +3
Query: 11 LPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGP 70
LP+P P + H IPP P+P TL IP PP P V H PV P
Sbjct: 306 LPIPPTLPIPPVLPHLPIPPTL--PIPPTLPIPPTLPIPPTLPIPPVLPHLPVPPVLNPP 479
Query: 71 PRNGPIPTP 79
G P+P
Sbjct: 480 SSGGSTPSP 506
Score = 27.3 bits (59), Expect = 5.1
Identities = 16/60 (26%), Positives = 27/60 (44%)
Frame = +3
Query: 10 SLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRG 69
+LP+P P + H +PP+ P + P P+ P PP + D P+ + + G
Sbjct: 402 TLPIPPTLPIPPVLPHLPVPPVLNPP-SSGGSTPSPTSPCPPKNKPAKDT-CPIDTLKLG 575
>TC93358 weakly similar to GP|7303636|gb|AAF58688.1| CG13214-PA {Drosophila
melanogaster}, partial (7%)
Length = 611
Score = 37.4 bits (85), Expect = 0.005
Identities = 33/115 (28%), Positives = 49/115 (41%), Gaps = 9/115 (7%)
Frame = -2
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQP----LPLTLNIPQPSHPPPPPPQDVVDNHAP 62
P PLP L P A P PPL +P L L +P PPPPP+ +++ P
Sbjct: 592 PPPPRPLPPLKP*----APPLPPPLPPRPESYFLSLA*PLPNLGPKPPPPPRPMLNPPPP 425
Query: 63 VRSRRRGPPRNGPIPTPF-----IWATDRRAKIHSLNHLLQNRIFNITGDVKCKS 112
++ G G P P IW++ R++ + L ++R IT +S
Sbjct: 424 GGGKK*GIGVTGADPKPVGCMRCIWSSTVRSRAAAAEILRRHRSNEITATAAKRS 260
>TC78080 similar to GP|16904226|gb|AAL30820.1 calcium/calmodulin-dependent
protein kinase CaMK3 {Nicotiana tabacum}, partial (46%)
Length = 1279
Score = 36.6 bits (83), Expect = 0.008
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -2
Query: 8 TQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPP 53
TQ+ P P+L P P Q PL ++ P P HPPPP P
Sbjct: 303 TQNAPYPLL---------PQPPTY*QNPLKTQISCPNPQHPPPPLP 193
>BQ144271 weakly similar to GP|21322711|em pherophorin-dz1 protein {Volvox
carteri f. nagariensis}, partial (5%)
Length = 919
Score = 36.6 bits (83), Expect = 0.008
Identities = 22/60 (36%), Positives = 30/60 (49%), Gaps = 1/60 (1%)
Frame = +1
Query: 13 LPMLTPFQRMFAHPNIPPLQQQPL-PLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPP 71
+P +P Q HP P + P P T+ P PS PP PPP + H P+++ GPP
Sbjct: 103 IPNASPHQ---PHPPRPSARAPPAAPGTIPPPLPSDPPHPPP----NTHHPIQAPSPGPP 261
Score = 26.6 bits (57), Expect = 8.7
Identities = 22/79 (27%), Positives = 29/79 (35%), Gaps = 9/79 (11%)
Frame = +3
Query: 10 SLPLPMLTPFQ-----RMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVR 64
S P P TP + R H PPL+ P S PPP P + + P+R
Sbjct: 117 STPAPPPTPLRSCPAGRAGDHSPPPPLRPPP--------SASQHPPPNPSPIPRSPFPIR 272
Query: 65 ----SRRRGPPRNGPIPTP 79
+ + PP P P
Sbjct: 273 K*KPTHKYNPPHIAPKAEP 329
>TC82284 weakly similar to GP|11119510|gb|AAF37724.2 diaphanous protein
{Entamoeba histolytica}, partial (4%)
Length = 671
Score = 36.2 bits (82), Expect = 0.011
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 26 PNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRG--PPRNGPIPTP 79
P +PP +P+P PQ PPPPPP + AP+ + R PP +G +P P
Sbjct: 43 PGVPP---RPMPPP---PQAPLPPPPPPPQGLPPGAPMGNPPRAPPPPMSGSMPPP 192
Score = 31.2 bits (69), Expect = 0.35
Identities = 21/68 (30%), Positives = 26/68 (37%)
Frame = +1
Query: 12 PLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPP 71
P PM P Q P PP Q LP + P PPPP + P+ + P
Sbjct: 55 PRPMPPPPQAPLPPPPPPP---QGLPPGAPMGNPPRAPPPPMSGSMPPPPPMAANGPRPG 225
Query: 72 RNGPIPTP 79
P+P P
Sbjct: 226 AMPPLPPP 249
Score = 27.7 bits (60), Expect = 3.9
Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
Frame = +1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQ-----PLPLTLNIPQPSHPPPPPPQDVVDNHA 61
P Q LP P M P PP P P+ N P+P PP PP +
Sbjct: 106 PPQGLP-----PGAPMGNPPRAPPPPMSGSMPPPPPMAANGPRPGAMPPLPPPAPIGTRP 270
Query: 62 PVRSRRRGPP 71
P +G P
Sbjct: 271 PSMPPPQGFP 300
>TC88261 similar to PIR|S22697|S22697 extensin - Volvox carteri (fragment),
partial (7%)
Length = 1516
Score = 36.2 bits (82), Expect = 0.011
Identities = 24/67 (35%), Positives = 29/67 (42%), Gaps = 2/67 (2%)
Frame = +2
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHP--PPPPPQDVVDNHAPVR 64
P S+PLP+ +P P PPL P P P PS P PPPPP + P+
Sbjct: 308 PEGSIPLPLDSP-------PPTPPLPSSPPPP----PPPSSPSPPPPPPPPPILQPLPLS 454
Query: 65 SRRRGPP 71
PP
Sbjct: 455 LPSSAPP 475
>BQ141742 weakly similar to PIR|T10798|T107 pherophorin-S - Volvox carteri,
partial (9%)
Length = 1337
Score = 36.2 bits (82), Expect = 0.011
Identities = 19/49 (38%), Positives = 22/49 (44%)
Frame = -2
Query: 6 QPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQ 54
QP +LP P L F + H P P PL P P PPPPP+
Sbjct: 151 QPPHALPSPPLRSFPWLAPHSQTQPATHSPPPLP---PPPPPIPPPPPR 14
Score = 26.9 bits (58), Expect = 6.7
Identities = 18/52 (34%), Positives = 23/52 (43%), Gaps = 2/52 (3%)
Frame = -1
Query: 4 SEQPTQSL--PLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPP 53
S PT++ P P+L A P +P + LP P H PPPPP
Sbjct: 155 SATPTRTALAPSPLLP-----LAGPPLPNPTRHSLPPPPPPPPTPHSPPPPP 15
>BQ144306 weakly similar to GP|23093252|gb| CG13731-PA {Drosophila
melanogaster}, partial (4%)
Length = 1261
Score = 35.8 bits (81), Expect = 0.014
Identities = 24/68 (35%), Positives = 32/68 (46%)
Frame = -1
Query: 17 TPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPI 76
+PF + +H PP P TL++P P PP PP P +R PP+ P
Sbjct: 526 SPFSSLPSHHPPPP------PHTLHLPSPRQHPPRPP--------PPTRQRPHPPQ--PT 395
Query: 77 PTPFIWAT 84
PTP + AT
Sbjct: 394 PTPNLRAT 371
Score = 27.3 bits (59), Expect = 5.1
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPP 53
P PLP TP HP P P N P H P PP
Sbjct: 482 PHSPPPLPQTTPTPTPTTHPTTTP----PPATDPNSQSPRHHPTTPP 354
Score = 26.6 bits (57), Expect = 8.7
Identities = 20/59 (33%), Positives = 22/59 (36%)
Frame = -2
Query: 19 FQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIP 77
F R P +PP P P T P+ PPP DN P PP N P P
Sbjct: 561 FARPTPPPLLPPRPSLPYPPTTRPLLPTLSTSPPP----DNTHP---DPHHPPDNDPTP 406
>BQ144168 similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (9%)
Length = 1381
Score = 35.8 bits (81), Expect = 0.014
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = +3
Query: 29 PPLQQQPLPLTLNIPQPSHPPPPPPQD 55
PP PLP P PSHPPPPPP D
Sbjct: 12 PPPPPLPLP-----PLPSHPPPPPPSD 77
>TC87806 similar to GP|21592931|gb|AAM64881.1 phosphoserine aminotransferase
{Arabidopsis thaliana}, partial (58%)
Length = 1010
Score = 35.4 bits (80), Expect = 0.019
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +1
Query: 4 SEQPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQ---PSHPPPPPPQDVVDNH 60
S QP+ S P P+ PFQ ++ PP + +P P IPQ + P PPP +
Sbjct: 97 SPQPSPSAPTPLSNPFQ---SNAPPPPTKPKPSPKPKPIPQIASSTSPLDPPPSLKTSSS 267
Query: 61 APVRSRRRG 69
P +S G
Sbjct: 268 KPNQSSTTG 294
>AL368332 weakly similar to GP|21322711|e pherophorin-dz1 protein {Volvox
carteri f. nagariensis}, partial (10%)
Length = 478
Score = 34.7 bits (78), Expect = 0.032
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Frame = +1
Query: 4 SEQPTQSLPLPMLTPFQRMFAHP-NIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAP 62
+ QP P P L P +HP N PP P+ P P HP PPP + + P
Sbjct: 28 TNQPNFYFPFPHLPPPP---SHPLNPPPSPFHPINPP---PSPFHPFNPPPPHSIKSPPP 189
Query: 63 VRSRRR----GPPRNGPIPTP 79
S PPR P P P
Sbjct: 190 APSHSSPPPPPPPRKXPPPPP 252
Score = 29.3 bits (64), Expect = 1.3
Identities = 21/74 (28%), Positives = 25/74 (33%)
Frame = +1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P S+ P P P P P P P P H PPP +P R
Sbjct: 160 PPHSIKSPPPAPSHSSPPPPPPPRKXPPPPPSHPFSPPPPHNHPPPSPHHPIAPSPPHVR 339
Query: 67 RRGPPRNGPIPTPF 80
PP P P+P+
Sbjct: 340 PSPPPPLPPSPSPY 381
>BQ141909 weakly similar to GP|14253159|emb VMP3 protein {Volvox carteri f.
nagariensis}, partial (13%)
Length = 1223
Score = 34.7 bits (78), Expect = 0.032
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQP--LPLTLNIPQPSHPPPPPP 53
P PLP + P F P +PP P LPL L+ P + PPP PP
Sbjct: 336 PLSRFPLPFVPP-PPFFPLPLLPPPLPPPPLLPLPLSDPPSAPPPPSPP 193
Score = 33.9 bits (76), Expect = 0.055
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = -2
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSR 66
P SL + P R +PP P P P PPPPPP +P+R
Sbjct: 385 PIPSLYFSLAAPL-RSSPSLTLPPSFCSSPPFLPPPPPPPSPPPPPPPP----SSPLRPP 221
Query: 67 RRGPPRNGPIP 77
R PP P+P
Sbjct: 220 LRSPPPLPPLP 188
Score = 33.5 bits (75), Expect = 0.071
Identities = 24/69 (34%), Positives = 29/69 (41%)
Frame = -3
Query: 11 LPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGP 70
LP P + P F P +PP PLPL +P P PPP P + D P
Sbjct: 360 LPPPSVPPPLSRFPLPFVPPPPFFPLPL---LPPPLPPPPLLPLPLSD-----------P 223
Query: 71 PRNGPIPTP 79
P P P+P
Sbjct: 222 PSAPPPPSP 196
Score = 33.1 bits (74), Expect = 0.093
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPP 53
P+ S PLP P +F P PPL P PPPPPP
Sbjct: 287 PSPSSPLPSPPPPSSLFPSPTPPPL-------------PPPPPPPPP 186
Score = 27.7 bits (60), Expect = 3.9
Identities = 22/74 (29%), Positives = 27/74 (35%)
Frame = -1
Query: 6 QPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRS 65
+P LPL +PF +F P P PLP PPPP + + P
Sbjct: 356 RPPPFLPLSHASPFL-LFLPPLSSPSPSSPLP-----------SPPPPSSLFPSPTP--- 222
Query: 66 RRRGPPRNGPIPTP 79
PP P P P
Sbjct: 221 ----PPLPPPPPPP 192
>BI264774 homologue to PIR|D49993|D49 ADP-ribosylation factor - Ajellomyces
capsulata, partial (91%)
Length = 665
Score = 34.7 bits (78), Expect = 0.032
Identities = 25/70 (35%), Positives = 33/70 (46%), Gaps = 5/70 (7%)
Frame = +1
Query: 4 SEQPTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTL--NIPQPSHPPPPPPQDV---VD 58
S + + ++P + P R+F P PP Q L T N P S PP PPP V V
Sbjct: 298 STRTSFAMPSFLSLPTSRIFPTP*TPPRSQTSLASTACDNAPGTSSPPVPPPVTVSMRVL 477
Query: 59 NHAPVRSRRR 68
+ +P S RR
Sbjct: 478 SGSPTPSERR 507
>BQ144407 weakly similar to GP|6523547|emb| hydroxyproline-rich glycoprotein
DZ-HRGP {Volvox carteri f. nagariensis}, partial (23%)
Length = 1217
Score = 34.7 bits (78), Expect = 0.032
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 17 TPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNG-P 75
TPF+R P + P PL +L++P HPP PP + H P+ S PR P
Sbjct: 668 TPFRR----PPLTPYPPLPLSTSLSLP---HPPVRPPSPLPPPHHPLLSPVPPTPRRSLP 510
Query: 76 IP 77
IP
Sbjct: 509 IP 504
Score = 32.3 bits (72), Expect = 0.16
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -2
Query: 7 PTQSLPLPMLTPF--QRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVR 64
P+ +LPLP + P + ++ P P + P P + PS+PP PPP V+
Sbjct: 664 PSAALPLPHIPPSLSRHLYHCPIHPSVLPHPYP---RLTTPSYPPFPPPLVVLSPFPLTP 494
Query: 65 SRRRGPPRNGPIP 77
S P P P
Sbjct: 493 SPTLASPFQHPPP 455
Score = 30.4 bits (67), Expect = 0.61
Identities = 18/59 (30%), Positives = 26/59 (43%), Gaps = 11/59 (18%)
Frame = -3
Query: 7 PTQSLPLPMLTPFQ--RMFAHPNIPP---------LQQQPLPLTLNIPQPSHPPPPPPQ 54
P S P+ P++ +F HP+ PP +Q LP + P PPP PP+
Sbjct: 360 PRHSAAPPLHAPYRLPHLFLHPHSPPAVIPLSLLPVQGPDLPPVSSPPPTPPPPPAPPR 184
Score = 29.6 bits (65), Expect = 1.0
Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 15/86 (17%)
Frame = -1
Query: 7 PTQSLPLPMLTPFQRMFAHPN-----IPPLQQQPL----------PLTLNIPQPSHPPPP 51
P+ ++PLP F + P IPP + P P L P P PPPP
Sbjct: 365 PSPAIPLP--PRFMPLIGSPTSSSIRIPPPRSSPYRCSRSKAPISPPFLLPPPPPRPPPP 192
Query: 52 PPQDVVDNHAPVRSRRRGPPRNGPIP 77
PP R PP P P
Sbjct: 191 PP------------GRPRPPHPSPFP 150
Score = 26.9 bits (58), Expect = 6.7
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQ-DVVDNHAP 62
P +PL +L P Q P++PP+ P P P P P PPP + N AP
Sbjct: 288 PPAVIPLSLL-PVQG----PDLPPVSSPP-PTPPPPPAPPRPAAPPPSLSISINPAP 136
>BF634212 weakly similar to GP|10798748|dbj elicitor inducible gene product
EIG-I24 {Nicotiana tabacum}, partial (14%)
Length = 385
Score = 34.3 bits (77), Expect = 0.042
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 34 QPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPRNGPIP---TPFIWAT 84
QP P T IP PS PPP ++ H+P S N P T F+ +T
Sbjct: 122 QPPPPTTMIPSPSSPPPSQKLSLITTHSPPHSATTTTASNSSAPKAKTAFLSST 283
>TC76828 similar to GP|17154773|gb|AAL35979.1 extensin-like protein {Cucumis
sativus}, partial (60%)
Length = 739
Score = 34.3 bits (77), Expect = 0.042
Identities = 23/67 (34%), Positives = 27/67 (39%)
Frame = +1
Query: 13 LPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRGPPR 72
+P P + H IPP P+P TL IP PP P V H PV P
Sbjct: 205 IPPTLPIPPVLPHLPIPPTL--PIPPTLPIPPTLPIPPTLPIPPVLPHLPVPPVLNPPSS 378
Query: 73 NGPIPTP 79
G P+P
Sbjct: 379 GGSTPSP 399
Score = 27.3 bits (59), Expect = 5.1
Identities = 16/60 (26%), Positives = 27/60 (44%)
Frame = +1
Query: 10 SLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQDVVDNHAPVRSRRRG 69
+LP+P P + H +PP+ P + P P+ P PP + D P+ + + G
Sbjct: 295 TLPIPPTLPIPPVLPHLPVPPVLNPP-SSGGSTPSPTSPCPPKNKPAKDT-CPIDTLKLG 468
>AJ502412 similar to GP|21592647|gb| unknown {Arabidopsis thaliana}, partial
(20%)
Length = 436
Score = 34.3 bits (77), Expect = 0.042
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 7 PTQSLPLPMLTPFQRMFAHPNIPPLQQQPLPLTLNIPQPSHPPPPPPQ 54
P + P P T + ++P PP + Q P+ N P PPPP P+
Sbjct: 286 PNFNSPTPPFTLNNPVSSNPPNPPAESQSPPVITNPTPPPPPPPPSPE 429
Database: MTGI
Posted date: Oct 22, 2004 3:39 PM
Number of letters in database: 27,044,181
Number of sequences in database: 36,976
Lambda K H
0.323 0.139 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,462,296
Number of Sequences: 36976
Number of extensions: 241794
Number of successful extensions: 6731
Number of sequences better than 10.0: 432
Number of HSP's better than 10.0 without gapping: 3143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4581
length of query: 233
length of database: 9,014,727
effective HSP length: 93
effective length of query: 140
effective length of database: 5,575,959
effective search space: 780634260
effective search space used: 780634260
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Medicago: description of AC141322.2